Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52170.t1 | ABN08827.1 | 94.2 | 378 | 21 | 1 | 1 | 378 | 1 | 377 | 1.40E-205 | 725.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52170.t1 | Q8LG03 | 45.7 | 376 | 197 | 2 | 9 | 377 | 2 | 377 | 4.8e-85 | 316.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52170.t1 | A2Q5C7 | 94.2 | 378 | 21 | 1 | 1 | 378 | 1 | 377 | 1.0e-205 | 725.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene52170 | 0.805199 | 1.50E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene52170 | 0.835431 | 1.69E-56 | -1.69E-46 |
| MS.gene050646 | MS.gene52170 | 0.809559 | 1.78E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene52170 | 0.822264 | 2.60E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene52170 | 0.873131 | 1.86E-67 | -1.69E-46 |
| MS.gene051003 | MS.gene52170 | 0.802905 | 4.49E-49 | -1.69E-46 |
| MS.gene051043 | MS.gene52170 | 0.804521 | 2.08E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene52170 | 0.855234 | 7.23E-62 | -1.69E-46 |
| MS.gene051343 | MS.gene52170 | 0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene051381 | MS.gene52170 | 0.803008 | 4.28E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene52170 | 0.808996 | 2.35E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene52170 | 0.806668 | 7.35E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene52170 | 0.818779 | 1.64E-52 | -1.69E-46 |
| MS.gene052072 | MS.gene52170 | 0.8835 | 4.26E-71 | -1.69E-46 |
| MS.gene052307 | MS.gene52170 | 0.853754 | 1.94E-61 | -1.69E-46 |
| MS.gene052533 | MS.gene52170 | 0.858781 | 6.51E-63 | -1.69E-46 |
| MS.gene052609 | MS.gene52170 | 0.83509 | 2.05E-56 | -1.69E-46 |
| MS.gene053143 | MS.gene52170 | 0.826612 | 2.47E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene52170 | 0.812739 | 3.64E-51 | -1.69E-46 |
| MS.gene054004 | MS.gene52170 | 0.815723 | 7.99E-52 | -1.69E-46 |
| MS.gene054413 | MS.gene52170 | 0.852859 | 3.50E-61 | -1.69E-46 |
| MS.gene054709 | MS.gene52170 | 0.808842 | 2.54E-50 | -1.69E-46 |
| MS.gene056578 | MS.gene52170 | 0.824218 | 9.09E-54 | -1.69E-46 |
| MS.gene056881 | MS.gene52170 | 0.830118 | 3.52E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene52170 | 0.874173 | 8.31E-68 | -1.69E-46 |
| MS.gene058074 | MS.gene52170 | 0.814139 | 1.79E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene52170 | 0.834042 | 3.77E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene52170 | 0.830873 | 2.30E-55 | -1.69E-46 |
| MS.gene059171 | MS.gene52170 | 0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene059227 | MS.gene52170 | 0.811241 | 7.72E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene52170 | 0.839408 | 1.61E-57 | -1.69E-46 |
| MS.gene05985 | MS.gene52170 | -0.819651 | 1.04E-52 | -1.69E-46 |
| MS.gene060343 | MS.gene52170 | -0.812002 | 5.28E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene52170 | 0.847505 | 1.11E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene52170 | 0.820816 | 5.62E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene52170 | 0.845225 | 4.64E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene52170 | 0.837978 | 3.78E-57 | -1.69E-46 |
| MS.gene061160 | MS.gene52170 | 0.817391 | 3.38E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52170.t1 | MTR_7g076190 | 93.386 | 378 | 24 | 1 | 1 | 378 | 1 | 377 | 0.0 | 713 |
| MS.gene52170.t1 | MTR_6g042460 | 33.333 | 321 | 155 | 9 | 1 | 318 | 1 | 265 | 8.68e-38 | 138 |
| MS.gene52170.t1 | MTR_0032s0060 | 39.474 | 114 | 66 | 1 | 171 | 284 | 57 | 167 | 4.02e-21 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52170.t1 | AT4G00755 | 46.543 | 376 | 194 | 3 | 9 | 377 | 2 | 377 | 1.76e-106 | 318 |
| MS.gene52170.t1 | AT4G00755 | 46.543 | 376 | 194 | 3 | 9 | 377 | 2 | 377 | 1.76e-106 | 318 |
Find 91 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCTGTTAGGTTTAAAA+TGG | 0.164926 | 7.4:-29291876 | MS.gene52170:CDS |
| TATCTTTCAGATTGAGCTTT+TGG | 0.220179 | 7.4:-29291325 | MS.gene52170:CDS |
| TGTGTCCATTTACTCCATTC+TGG | 0.220340 | 7.4:+29292338 | None:intergenic |
| GCATTCACTGTTGATATTCT+TGG | 0.256850 | 7.4:-29289622 | MS.gene52170:CDS |
| CTGAACCAGAATGGAGTAAA+TGG | 0.275177 | 7.4:-29292343 | MS.gene52170:CDS |
| TCACGATCTTGGCGACATTT+TGG | 0.302809 | 7.4:-29293531 | MS.gene52170:intron |
| CATTCACTGTTGATATTCTT+GGG | 0.312397 | 7.4:-29289621 | MS.gene52170:CDS |
| TCTGCTGTGTTTCACGATCT+TGG | 0.342830 | 7.4:-29293542 | MS.gene52170:CDS |
| TGGATGGCTTATTATACATT+TGG | 0.349338 | 7.4:-29291281 | MS.gene52170:intron |
| TTGTCCACTACTTGACCAAT+AGG | 0.353318 | 7.4:+29292111 | None:intergenic |
| TATATTCAGCAAAATCTGTT+AGG | 0.357525 | 7.4:-29291886 | MS.gene52170:CDS |
| GTTGATATTCTTGGGCCCTC+TGG | 0.380052 | 7.4:-29289613 | MS.gene52170:CDS |
| GAGCTGGACTTTCCATAGAT+TGG | 0.386248 | 7.4:+29292299 | None:intergenic |
| ACAAATTGTGAATATATTGC+GGG | 0.389334 | 7.4:-29289494 | MS.gene52170:CDS |
| GGTTGGATCTAGCCAATCTA+TGG | 0.397982 | 7.4:-29292311 | MS.gene52170:CDS |
| GTCACTGTGGGTTGACAGTT+GGG | 0.402967 | 7.4:+29289562 | None:intergenic |
| CCAATACAGAGTACAGGTTC+TGG | 0.412219 | 7.4:+29291351 | None:intergenic |
| AACAGGAGATAAGCAGGATT+TGG | 0.417619 | 7.4:+29292243 | None:intergenic |
| TATTGCTCATGTTCAAGCTC+TGG | 0.429024 | 7.4:-29289662 | MS.gene52170:CDS |
| GTTAATGTCTCGGGTACATT+GGG | 0.429167 | 7.4:+29292082 | None:intergenic |
| CCAGAACCTGTACTCTGTAT+TGG | 0.449615 | 7.4:-29291351 | MS.gene52170:CDS |
| CTGCTTATCTCCTGTTGTTG+AGG | 0.449921 | 7.4:-29292236 | MS.gene52170:CDS |
| TATATTGCGGGCACAAGTAA+TGG | 0.450390 | 7.4:-29289482 | MS.gene52170:CDS |
| ACCGGAGTTTCCAATGGCTC+AGG | 0.451183 | 7.4:-29291750 | MS.gene52170:intron |
| TGGAAACTCCGGTGATGTAT+AGG | 0.455535 | 7.4:+29291760 | None:intergenic |
| ACCAGCTAAATCATCTAAAG+AGG | 0.460152 | 7.4:+29291841 | None:intergenic |
| TGGTTTGCAGTGGTTACAAA+TGG | 0.465133 | 7.4:-29292430 | MS.gene52170:intron |
| AGTAGAAGCTATGGATGGTT+GGG | 0.465286 | 7.4:-29289458 | MS.gene52170:CDS |
| TTCCTTGTGAACAGGAAAAC+CGG | 0.471948 | 7.4:-29291392 | MS.gene52170:intron |
| ATGAAAGTGAAAAGTATGTA+TGG | 0.477413 | 7.4:-29291784 | MS.gene52170:CDS |
| AGCTGAGAAAATCGTTAGAA+TGG | 0.480550 | 7.4:+29293631 | None:intergenic |
| CTATGATCTTTCTGAAGAGC+TGG | 0.481335 | 7.4:+29292283 | None:intergenic |
| GCTATGCAATCCTCAACAAC+AGG | 0.484027 | 7.4:+29292226 | None:intergenic |
| CTCAACAACAGGAGATAAGC+AGG | 0.486568 | 7.4:+29292237 | None:intergenic |
| GCCTCTTTAGATGATTTAGC+TGG | 0.489113 | 7.4:-29291842 | MS.gene52170:CDS |
| GATTGCATAGCTAAGGCAAT+TGG | 0.489466 | 7.4:-29292214 | MS.gene52170:CDS |
| AAATCTGTTAGGTTTAAAAT+GGG | 0.491047 | 7.4:-29291875 | MS.gene52170:CDS |
| ATATTGCGGGCACAAGTAAT+GGG | 0.492153 | 7.4:-29289481 | MS.gene52170:CDS |
| AAGTGGTATGTTAATGTCTC+GGG | 0.494932 | 7.4:+29292073 | None:intergenic |
| AAGGGTACAGAGGCAAGAAA+TGG | 0.495034 | 7.4:-29291301 | MS.gene52170:CDS |
| CTGTCCAGCTCACTTTCAGA+TGG | 0.501238 | 7.4:-29291918 | MS.gene52170:intron |
| TGTTAATGTCTCGGGTACAT+TGG | 0.507386 | 7.4:+29292081 | None:intergenic |
| GACAAATTGTGAATATATTG+CGG | 0.508939 | 7.4:-29289495 | MS.gene52170:CDS |
| ATCAATATTCAGCCTTTCCA+AGG | 0.513966 | 7.4:-29292022 | MS.gene52170:intron |
| CAAGTGGTATGTTAATGTCT+CGG | 0.516076 | 7.4:+29292072 | None:intergenic |
| AGATGATTTAGCTGGTGAAA+CGG | 0.521989 | 7.4:-29291834 | MS.gene52170:CDS |
| ATCGTTAGAATGGTCCATCA+TGG | 0.522672 | 7.4:+29293641 | None:intergenic |
| TAAGTACAAACCTGAGCCAT+TGG | 0.523164 | 7.4:+29291740 | None:intergenic |
| ACCTGAGCCATTGGAAACTC+CGG | 0.527741 | 7.4:+29291749 | None:intergenic |
| GAAGCGTGAACTTCTGTAGC+CGG | 0.531432 | 7.4:+29291373 | None:intergenic |
| TAGCACTGATAATTTCCCTC+AGG | 0.534992 | 7.4:-29292185 | MS.gene52170:CDS |
| GAGTAGAAGCTATGGATGGT+TGG | 0.535671 | 7.4:-29289459 | MS.gene52170:CDS |
| TCAAGCACAACTGCTTAGAA+AGG | 0.538427 | 7.4:+29292407 | None:intergenic |
| ATTGCTCATGTTCAAGCTCT+GGG | 0.540497 | 7.4:-29289661 | MS.gene52170:CDS |
| TGTCCAGCTCACTTTCAGAT+GGG | 0.549775 | 7.4:-29291917 | MS.gene52170:intron |
| AGTCACTGTGGGTTGACAGT+TGG | 0.550409 | 7.4:+29289561 | None:intergenic |
| AGTAATGGGAGTAGAAGCTA+TGG | 0.552734 | 7.4:-29289467 | MS.gene52170:CDS |
| ACCAACTTCCATGTCCATGA+TGG | 0.554608 | 7.4:-29293655 | None:intergenic |
| GAACCTGTACTCTGTATTGG+TGG | 0.555692 | 7.4:-29291348 | MS.gene52170:CDS |
| TGTTGAGGATTGCATAGCTA+AGG | 0.558055 | 7.4:-29292221 | MS.gene52170:CDS |
| GTAAATGGACACACAGAGGT+TGG | 0.559495 | 7.4:-29292328 | MS.gene52170:CDS |
| CAAGCAACTCTAGATAATTG+AGG | 0.563729 | 7.4:+29292376 | None:intergenic |
| TGTAATAACACATATTTGAG+AGG | 0.564766 | 7.4:+29292048 | None:intergenic |
| GTTGTTGAACTGAACCAGAA+TGG | 0.565614 | 7.4:-29292352 | MS.gene52170:CDS |
| AGAATATCAACAGTGAATGC+TGG | 0.571292 | 7.4:+29289625 | None:intergenic |
| CACATATTTGAGAGGTCAAG+TGG | 0.574105 | 7.4:+29292056 | None:intergenic |
| TTTCAAATATCACCTTGGAA+AGG | 0.578942 | 7.4:+29292010 | None:intergenic |
| TGGGTTGACAGTTGGGCCCG+TGG | 0.582111 | 7.4:+29289569 | None:intergenic |
| ATCGTGAAACACAGCAGACA+CGG | 0.588959 | 7.4:+29293547 | None:intergenic |
| GAGGAAAGAGACAACATTGG+TGG | 0.593992 | 7.4:-29292142 | MS.gene52170:CDS |
| CAGACACGGACTAGATCCGC+TGG | 0.596947 | 7.4:+29293561 | None:intergenic |
| ATACCACCAATACAGAGTAC+AGG | 0.601675 | 7.4:+29291345 | None:intergenic |
| TACATCACCGGAGTTTCCAA+TGG | 0.602849 | 7.4:-29291756 | MS.gene52170:CDS |
| GAGCATTGATCACACTCTTG+AGG | 0.611911 | 7.4:-29292161 | MS.gene52170:CDS |
| GTGTGATCAATGCTCTCCTG+AGG | 0.612736 | 7.4:+29292169 | None:intergenic |
| TGTGATCAATGCTCTCCTGA+GGG | 0.617504 | 7.4:+29292170 | None:intergenic |
| ATGGGAGTAGAAGCTATGGA+TGG | 0.618739 | 7.4:-29289463 | MS.gene52170:CDS |
| AGAATGGTCCATCATGGACA+TGG | 0.623250 | 7.4:+29293647 | None:intergenic |
| TTATACCAGCAAAGATCACA+AGG | 0.624193 | 7.4:+29289390 | None:intergenic |
| CAAGTGTCTGGATGATCCAG+CGG | 0.627067 | 7.4:-29293577 | MS.gene52170:CDS |
| GTCCAGCTCACTTTCAGATG+GGG | 0.627483 | 7.4:-29291916 | MS.gene52170:intron |
| TTGTATTGAAGAGAAACCAC+GGG | 0.632803 | 7.4:-29289585 | MS.gene52170:CDS |
| TTCAATACAAACATTCCAGA+GGG | 0.634354 | 7.4:+29289598 | None:intergenic |
| TGTATGGACCTATACATCAC+CGG | 0.638932 | 7.4:-29291768 | MS.gene52170:CDS |
| GTACAGAGGCAAGAAATGGA+TGG | 0.644765 | 7.4:-29291297 | MS.gene52170:CDS |
| AGTGACTTCTGAAAATCAGT+CGG | 0.655308 | 7.4:-29289545 | MS.gene52170:CDS |
| CTTCAATACAAACATTCCAG+AGG | 0.673331 | 7.4:+29289597 | None:intergenic |
| TTTGTATTGAAGAGAAACCA+CGG | 0.681235 | 7.4:-29289586 | MS.gene52170:CDS |
| CTTGAGGAAAGAGACAACAT+TGG | 0.703612 | 7.4:-29292145 | MS.gene52170:CDS |
| TATACCAGCAAAGATCACAA+GGG | 0.718787 | 7.4:+29289391 | None:intergenic |
| TGGAGTAAATGGACACACAG+AGG | 0.727277 | 7.4:-29292332 | MS.gene52170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTAATCTTTATAAAAAT+TGG | + | chr7.4:29293064-29293083 | None:intergenic | 10.0% |
| !!! | TTTTAAAATTTTTGGTTTAA+AGG | - | chr7.4:29292847-29292866 | MS.gene52170:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7.4:29292346-29292365 | MS.gene52170:CDS | 100.0% |
| !! | AAATCTTGTTAAACATTAAT+AGG | - | chr7.4:29293096-29293115 | MS.gene52170:intron | 15.0% |
| !! | AAATTGAAAAGTAAATTTGT+TGG | - | chr7.4:29291452-29291471 | MS.gene52170:intron | 15.0% |
| !! | AATCTTGTTAAACATTAATA+GGG | - | chr7.4:29293097-29293116 | MS.gene52170:intron | 15.0% |
| !! | AGTATATCATTTAGTATATT+TGG | - | chr7.4:29290236-29290255 | MS.gene52170:intron | 15.0% |
| !! | ATAAAAAAGAAAACTAAGAA+AGG | + | chr7.4:29292954-29292973 | None:intergenic | 15.0% |
| !! | ATAATCTATAAGTTAAGAAA+TGG | - | chr7.4:29293239-29293258 | MS.gene52170:intron | 15.0% |
| !! | TAAAAAAGAAAACTAAGAAA+GGG | + | chr7.4:29292953-29292972 | None:intergenic | 15.0% |
| !!! | AATTTTATTTGATCTTGATA+TGG | - | chr7.4:29290289-29290308 | MS.gene52170:intron | 15.0% |
| !!! | ATTAATGTTTAACAAGATTT+TGG | + | chr7.4:29293096-29293115 | None:intergenic | 15.0% |
| !!! | ATTTTATTTGATCTTGATAT+GGG | - | chr7.4:29290290-29290309 | MS.gene52170:intron | 15.0% |
| !!! | CTAATTTTAAAAAAAAATGC+TGG | - | chr7.4:29290179-29290198 | MS.gene52170:intron | 15.0% |
| !!! | TTATTTATTTTGAAAGAGAT+AGG | + | chr7.4:29290469-29290488 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAACTAAGAAAG+GGG | + | chr7.4:29292952-29292971 | None:intergenic | 20.0% |
| !! | AAAATCTGTTAGGTTTAAAA+TGG | - | chr7.4:29291174-29291193 | MS.gene52170:intron | 20.0% |
| !! | ATTAAATTTCACAAAGTACA+GGG | + | chr7.4:29290124-29290143 | None:intergenic | 20.0% |
| !! | GTGGAAAATTAAAATTCTAA+CGG | - | chr7.4:29293028-29293047 | MS.gene52170:intron | 20.0% |
| !! | TATTAAATTTCACAAAGTAC+AGG | + | chr7.4:29290125-29290144 | None:intergenic | 20.0% |
| !! | TGGAAAATTAAAATTCTAAC+GGG | - | chr7.4:29293029-29293048 | MS.gene52170:intron | 20.0% |
| !! | TTGCTAAAATAATACATCAA+CGG | + | chr7.4:29290337-29290356 | None:intergenic | 20.0% |
| !!! | AAATCTGTTAGGTTTAAAAT+GGG | - | chr7.4:29291175-29291194 | MS.gene52170:intron | 20.0% |
| !!! | AGCTATATTATCTCTTTTTT+TGG | + | chr7.4:29291245-29291264 | None:intergenic | 20.0% |
| !!! | CCAAAAATTTTAAAATACTG+TGG | + | chr7.4:29292842-29292861 | None:intergenic | 20.0% |
| !!! | CCACAGTATTTTAAAATTTT+TGG | - | chr7.4:29292839-29292858 | MS.gene52170:intron | 20.0% |
| !!! | GATTTAACTTTAAGTTGTAA+AGG | + | chr7.4:29289719-29289738 | None:intergenic | 20.0% |
| !!! | GCTATATTATCTCTTTTTTT+GGG | + | chr7.4:29291244-29291263 | None:intergenic | 20.0% |
| !!! | GTTATTGTTATTGAATGATA+AGG | - | chr7.4:29292453-29292472 | MS.gene52170:intron | 20.0% |
| !!! | TGAGGTTTTATTAAAATTGT+TGG | - | chr7.4:29291821-29291840 | MS.gene52170:CDS | 20.0% |
| !!! | TTTTTAAAATTAGCCATAGT+AGG | + | chr7.4:29290172-29290191 | None:intergenic | 20.0% |
| ! | AAAAAGAAAACTAAGAAAGG+GGG | + | chr7.4:29292951-29292970 | None:intergenic | 25.0% |
| ! | ACAAATGACTCTTATAAAAG+AGG | + | chr7.4:29292763-29292782 | None:intergenic | 25.0% |
| ! | ACAAATTGTGAATATATTGC+GGG | - | chr7.4:29293556-29293575 | MS.gene52170:CDS | 25.0% |
| ! | ACACAGTTATATAAAGCTAT+TGG | - | chr7.4:29292483-29292502 | MS.gene52170:intron | 25.0% |
| ! | ATTAAAATTGTTGGCATAGT+AGG | - | chr7.4:29291830-29291849 | MS.gene52170:CDS | 25.0% |
| ! | ATTGACAGATAAATATCTTC+TGG | + | chr7.4:29292912-29292931 | None:intergenic | 25.0% |
| ! | GACAAATTGTGAATATATTG+CGG | - | chr7.4:29293555-29293574 | MS.gene52170:CDS | 25.0% |
| ! | GGCTTATTGTGAATTTATAT+AGG | + | chr7.4:29291864-29291883 | None:intergenic | 25.0% |
| ! | TACAACTTAAAGTTAAATCC+AGG | - | chr7.4:29289720-29289739 | MS.gene52170:intron | 25.0% |
| ! | TAGTAGGTAATCTATTAATG+AGG | - | chr7.4:29292158-29292177 | MS.gene52170:CDS | 25.0% |
| ! | TATATTCAGCAAAATCTGTT+AGG | - | chr7.4:29291164-29291183 | MS.gene52170:intron | 25.0% |
| ! | TATCATTTAGTATATTTGGC+TGG | - | chr7.4:29290240-29290259 | MS.gene52170:intron | 25.0% |
| ! | TATTGTTAGCGAAAAAACAT+AGG | + | chr7.4:29291104-29291123 | None:intergenic | 25.0% |
| ! | TCAAATTTACTCAGTTACAT+AGG | + | chr7.4:29290032-29290051 | None:intergenic | 25.0% |
| ! | TGCTAAAATAATACATCAAC+GGG | + | chr7.4:29290336-29290355 | None:intergenic | 25.0% |
| ! | TGTAATAACACATATTTGAG+AGG | + | chr7.4:29291005-29291024 | None:intergenic | 25.0% |
| ! | TTAAATAGAGACTTATGACA+TGG | - | chr7.4:29290211-29290230 | MS.gene52170:intron | 25.0% |
| ! | TTACTTATGAGTTATGCATT+GGG | - | chr7.4:29290363-29290382 | MS.gene52170:intron | 25.0% |
| ! | TTGTCATATAGAATAATGCT+TGG | + | chr7.4:29289837-29289856 | None:intergenic | 25.0% |
| !! | ACAGATTTTGCTGAATATAT+AGG | + | chr7.4:29291163-29291182 | None:intergenic | 25.0% |
| !! | ACTTGTTTCTTTCATTTGAT+AGG | + | chr7.4:29290504-29290523 | None:intergenic | 25.0% |
| !! | ATGAAAGTGAAAAGTATGTA+TGG | - | chr7.4:29291266-29291285 | MS.gene52170:intron | 25.0% |
| !! | TGCTATTTGAAAGTTAAGAA+AGG | - | chr7.4:29292135-29292154 | MS.gene52170:CDS | 25.0% |
| !!! | CATGGTTTTTTTATACTTAG+AGG | - | chr7.4:29291973-29291992 | MS.gene52170:intron | 25.0% |
| !!! | CTACTAATGTTTTGAACAAT+CGG | - | chr7.4:29291608-29291627 | MS.gene52170:intron | 25.0% |
| !!! | CTAGATATGCTTTGTTTAAA+AGG | - | chr7.4:29291404-29291423 | MS.gene52170:intron | 25.0% |
| !!! | TTTTTATACTTAGAGGCATA+CGG | - | chr7.4:29291980-29291999 | MS.gene52170:intron | 25.0% |
| ATAAATAAACCACTCAATCC+AGG | + | chr7.4:29292054-29292073 | None:intergenic | 30.0% | |
| ATGTAAAACATATGCCATCA+AGG | + | chr7.4:29289604-29289623 | None:intergenic | 30.0% | |
| ATTATAACTTCCTAGGGTTT+AGG | + | chr7.4:29292087-29292106 | None:intergenic | 30.0% | |
| ATTATTGCCTTTCAACCTAA+TGG | - | chr7.4:29292994-29293013 | MS.gene52170:intron | 30.0% | |
| ATTCTGATTTCAGTTACGAA+AGG | + | chr7.4:29292512-29292531 | None:intergenic | 30.0% | |
| ATTTGATCTTGATATGGGAT+AGG | - | chr7.4:29290295-29290314 | MS.gene52170:intron | 30.0% | |
| CATTCACTGTTGATATTCTT+GGG | - | chr7.4:29293429-29293448 | MS.gene52170:intron | 30.0% | |
| GAAGATTTCAAATATCACCT+TGG | + | chr7.4:29291048-29291067 | None:intergenic | 30.0% | |
| GCAATGATTAACTGATGTTA+TGG | - | chr7.4:29290600-29290619 | MS.gene52170:intron | 30.0% | |
| GTAAAATAGAACAGAGACAA+GGG | + | chr7.4:29293140-29293159 | None:intergenic | 30.0% | |
| GTTACTTATGAGTTATGCAT+TGG | - | chr7.4:29290362-29290381 | MS.gene52170:intron | 30.0% | |
| TAAATTCACAATAAGCCTGA+CGG | - | chr7.4:29291867-29291886 | MS.gene52170:CDS | 30.0% | |
| TCTTATAAAAGAGGACACAA+AGG | + | chr7.4:29292754-29292773 | None:intergenic | 30.0% | |
| TGAAAGTTAAGAAAGGTAGT+AGG | - | chr7.4:29292142-29292161 | MS.gene52170:CDS | 30.0% | |
| TGCATAACTCATAAGTAACA+AGG | + | chr7.4:29290361-29290380 | None:intergenic | 30.0% | |
| TGCTCTATCAAAAACTACTT+GGG | + | chr7.4:29293190-29293209 | None:intergenic | 30.0% | |
| TGGATGGCTTATTATACATT+TGG | - | chr7.4:29291769-29291788 | MS.gene52170:CDS | 30.0% | |
| TGTAAAATAGAACAGAGACA+AGG | + | chr7.4:29293141-29293160 | None:intergenic | 30.0% | |
| TTAATATCTCCATGAACTAC+TGG | - | chr7.4:29290139-29290158 | MS.gene52170:intron | 30.0% | |
| TTATAACTTCCTAGGGTTTA+GGG | + | chr7.4:29292086-29292105 | None:intergenic | 30.0% | |
| TTCAATACAAACATTCCAGA+GGG | + | chr7.4:29293455-29293474 | None:intergenic | 30.0% | |
| TTGCTCTATCAAAAACTACT+TGG | + | chr7.4:29293191-29293210 | None:intergenic | 30.0% | |
| TTTCAAATATCACCTTGGAA+AGG | + | chr7.4:29291043-29291062 | None:intergenic | 30.0% | |
| TTTGTATTGAAGAGAAACCA+CGG | - | chr7.4:29293464-29293483 | MS.gene52170:intron | 30.0% | |
| ! | ACACTCTGGTTTGATTAAAA+AGG | - | chr7.4:29293264-29293283 | MS.gene52170:intron | 30.0% |
| ! | ACTCTGGTTTGATTAAAAAG+GGG | - | chr7.4:29293266-29293285 | MS.gene52170:intron | 30.0% |
| ! | CACTCTGGTTTGATTAAAAA+GGG | - | chr7.4:29293265-29293284 | MS.gene52170:intron | 30.0% |
| ! | TATCTTTCAGATTGAGCTTT+TGG | - | chr7.4:29291725-29291744 | MS.gene52170:intron | 30.0% |
| ! | TCTCTGCTATATTTTACTAG+AGG | - | chr7.4:29289667-29289686 | MS.gene52170:intron | 30.0% |
| !!! | AGAGATAGGAGCTTTTTTAA+TGG | + | chr7.4:29290455-29290474 | None:intergenic | 30.0% |
| !!! | TATACAGTAAAGCACTGTTT+TGG | - | chr7.4:29289925-29289944 | MS.gene52170:intron | 30.0% |
| !!! | TCTCAAAATTTTCAAGTGTC+TGG | - | chr7.4:29289461-29289480 | MS.gene52170:CDS | 30.0% |
| AACCCTAGGAAGTTATAATC+TGG | - | chr7.4:29292088-29292107 | MS.gene52170:CDS | 35.0% | |
| AAGTCATTCTACTACTTTGG+AGG | + | chr7.4:29291503-29291522 | None:intergenic | 35.0% | |
| AAGTGGTATGTTAATGTCTC+GGG | + | chr7.4:29290980-29290999 | None:intergenic | 35.0% | |
| ACCAGCTAAATCATCTAAAG+AGG | + | chr7.4:29291212-29291231 | None:intergenic | 35.0% | |
| AGAAACAAGTTCATTACCAG+TGG | - | chr7.4:29290514-29290533 | MS.gene52170:intron | 35.0% | |
| AGAATATCAACAGTGAATGC+TGG | + | chr7.4:29293428-29293447 | None:intergenic | 35.0% | |
| AGATGATTTAGCTGGTGAAA+CGG | - | chr7.4:29291216-29291235 | MS.gene52170:intron | 35.0% | |
| AGCTGAGAAAATCGTTAGAA+TGG | + | chr7.4:29289422-29289441 | None:intergenic | 35.0% | |
| AGTAAATTTGACGCAGACTT+GGG | - | chr7.4:29290041-29290060 | MS.gene52170:intron | 35.0% | |
| AGTCATTCTACTACTTTGGA+GGG | + | chr7.4:29291502-29291521 | None:intergenic | 35.0% | |
| AGTTATGCATTGGGATTTGA+AGG | - | chr7.4:29290372-29290391 | MS.gene52170:intron | 35.0% | |
| ATATTGCAGTAAGAAAGGCA+TGG | - | chr7.4:29292182-29292201 | MS.gene52170:CDS | 35.0% | |
| ATCAATATTCAGCCTTTCCA+AGG | - | chr7.4:29291028-29291047 | MS.gene52170:intron | 35.0% | |
| CAAGCAACTCTAGATAATTG+AGG | + | chr7.4:29290677-29290696 | None:intergenic | 35.0% | |
| CAAGTGGTATGTTAATGTCT+CGG | + | chr7.4:29290981-29291000 | None:intergenic | 35.0% | |
| CACCAGATTATAACTTCCTA+GGG | + | chr7.4:29292093-29292112 | None:intergenic | 35.0% | |
| CAGCAAAAAAACTCATAGTC+AGG | + | chr7.4:29293298-29293317 | None:intergenic | 35.0% | |
| CTCACTGTAAGATGAAAGAA+AGG | + | chr7.4:29292578-29292597 | None:intergenic | 35.0% | |
| CTTCAATACAAACATTCCAG+AGG | + | chr7.4:29293456-29293475 | None:intergenic | 35.0% | |
| GAAACAAGTTCATTACCAGT+GGG | - | chr7.4:29290515-29290534 | MS.gene52170:intron | 35.0% | |
| GAGGTATATTGCAGTAAGAA+AGG | - | chr7.4:29292177-29292196 | MS.gene52170:CDS | 35.0% | |
| GATGTCGGATCATTAATACA+AGG | + | chr7.4:29292732-29292751 | None:intergenic | 35.0% | |
| GCATTCACTGTTGATATTCT+TGG | - | chr7.4:29293428-29293447 | MS.gene52170:intron | 35.0% | |
| GCTAAGTCATTCTACTACTT+TGG | + | chr7.4:29291506-29291525 | None:intergenic | 35.0% | |
| GGTTTAAAGGCTGCTTAATT+CGG | - | chr7.4:29292860-29292879 | MS.gene52170:intron | 35.0% | |
| GTTTAAAGGCTGCTTAATTC+GGG | - | chr7.4:29292861-29292880 | MS.gene52170:intron | 35.0% | |
| TAAATGTCCAGTTTGTGTTG+TGG | + | chr7.4:29292281-29292300 | None:intergenic | 35.0% | |
| TATGGGATAGGATTGAGTAT+TGG | - | chr7.4:29290307-29290326 | MS.gene52170:intron | 35.0% | |
| TCACCAGATTATAACTTCCT+AGG | + | chr7.4:29292094-29292113 | None:intergenic | 35.0% | |
| TCAGTTACATAGGTACTCAA+AGG | + | chr7.4:29290022-29290041 | None:intergenic | 35.0% | |
| TGCATTCACAATTGTAAGTC+AGG | + | chr7.4:29293367-29293386 | None:intergenic | 35.0% | |
| TTATGCTGATATAACCACCT+AGG | - | chr7.4:29292782-29292801 | MS.gene52170:intron | 35.0% | |
| TTGTATTGAAGAGAAACCAC+GGG | - | chr7.4:29293465-29293484 | MS.gene52170:intron | 35.0% | |
| ! | AGAGAGAGCACAATTCTAAA+AGG | + | chr7.4:29289652-29289671 | None:intergenic | 35.0% |
| ! | AGTGACTTCTGAAAATCAGT+CGG | - | chr7.4:29293505-29293524 | MS.gene52170:intron | 35.0% |
| ! | CATTAGTAGAGTGTTACTCA+AGG | + | chr7.4:29291597-29291616 | None:intergenic | 35.0% |
| ! | GTTCAAGTTTAGATCCTTGA+TGG | - | chr7.4:29289587-29289606 | MS.gene52170:CDS | 35.0% |
| ! | TGATTTTCAGAAGTCACTGT+GGG | + | chr7.4:29293503-29293522 | None:intergenic | 35.0% |
| ! | TTTTCCTATTGGTCAAGTAG+TGG | - | chr7.4:29290935-29290954 | MS.gene52170:intron | 35.0% |
| !! | TACTGGTTTAGATCCTACTA+TGG | - | chr7.4:29290156-29290175 | MS.gene52170:intron | 35.0% |
| !! | TCAGATTGAGCTTTTGGAAA+GGG | - | chr7.4:29291731-29291750 | MS.gene52170:intron | 35.0% |
| !! | TGAAAGGTGTTTGCATTTCA+TGG | - | chr7.4:29291955-29291974 | MS.gene52170:intron | 35.0% |
| !! | TTCAGATTGAGCTTTTGGAA+AGG | - | chr7.4:29291730-29291749 | MS.gene52170:intron | 35.0% |
| !! | TTGGTGGTAGATTTTCCTAT+TGG | - | chr7.4:29290924-29290943 | MS.gene52170:intron | 35.0% |
| !! | TTTGGACCTTTGAAGTTACT+GGG | - | chr7.4:29289975-29289994 | MS.gene52170:intron | 35.0% |
| !!! | TTTTGGACCTTTGAAGTTAC+TGG | - | chr7.4:29289974-29289993 | MS.gene52170:intron | 35.0% |
| AAAACTAAGAAAGGGGGATG+AGG | + | chr7.4:29292945-29292964 | None:intergenic | 40.0% | |
| AAACTAAGAAAGGGGGATGA+GGG | + | chr7.4:29292944-29292963 | None:intergenic | 40.0% | |
| AAAGAGGACACAAAGGATGT+CGG | + | chr7.4:29292747-29292766 | None:intergenic | 40.0% | |
| AAAGTGAGTGCATCTTAGAG+GGG | + | chr7.4:29289951-29289970 | None:intergenic | 40.0% | |
| AACAGGAGATAAGCAGGATT+TGG | + | chr7.4:29290810-29290829 | None:intergenic | 40.0% | |
| AGTAGAAGCTATGGATGGTT+GGG | - | chr7.4:29293592-29293611 | MS.gene52170:CDS | 40.0% | |
| ATACCACCAATACAGAGTAC+AGG | + | chr7.4:29291708-29291727 | None:intergenic | 40.0% | |
| ATATTGCGGGCACAAGTAAT+GGG | - | chr7.4:29293569-29293588 | MS.gene52170:CDS | 40.0% | |
| ATCGTTAGAATGGTCCATCA+TGG | + | chr7.4:29289412-29289431 | None:intergenic | 40.0% | |
| ATTAGCAAACTTGTGTGCTG+AGG | - | chr7.4:29291803-29291822 | MS.gene52170:CDS | 40.0% | |
| CACATATTTGAGAGGTCAAG+TGG | + | chr7.4:29290997-29291016 | None:intergenic | 40.0% | |
| CATAAACAATGCTTAGTGCC+TGG | + | chr7.4:29289741-29289760 | None:intergenic | 40.0% | |
| CCAACTCAGATAGTTGACAT+AGG | - | chr7.4:29292426-29292445 | MS.gene52170:intron | 40.0% | |
| CCTATGTCAACTATCTGAGT+TGG | + | chr7.4:29292429-29292448 | None:intergenic | 40.0% | |
| CTGAACCAGAATGGAGTAAA+TGG | - | chr7.4:29290707-29290726 | MS.gene52170:intron | 40.0% | |
| CTTGAGGAAAGAGACAACAT+TGG | - | chr7.4:29290905-29290924 | MS.gene52170:intron | 40.0% | |
| GAAAACGATTCCTTGTGAAC+AGG | - | chr7.4:29291650-29291669 | MS.gene52170:intron | 40.0% | |
| GAAAGTGAGTGCATCTTAGA+GGG | + | chr7.4:29289952-29289971 | None:intergenic | 40.0% | |
| GAGTAAATTTGACGCAGACT+TGG | - | chr7.4:29290040-29290059 | MS.gene52170:intron | 40.0% | |
| GATTGCATAGCTAAGGCAAT+TGG | - | chr7.4:29290836-29290855 | MS.gene52170:intron | 40.0% | |
| GCCTCTTTAGATGATTTAGC+TGG | - | chr7.4:29291208-29291227 | MS.gene52170:intron | 40.0% | |
| GGAAGTTATAATCTGGTGAC+TGG | - | chr7.4:29292095-29292114 | MS.gene52170:CDS | 40.0% | |
| GGATCTAAACCAGTAGTTCA+TGG | + | chr7.4:29290151-29290170 | None:intergenic | 40.0% | |
| GTAAATTTGACGCAGACTTG+GGG | - | chr7.4:29290042-29290061 | MS.gene52170:intron | 40.0% | |
| GTTAAGAAATGGACACACTC+TGG | - | chr7.4:29293250-29293269 | MS.gene52170:intron | 40.0% | |
| GTTAATGTCTCGGGTACATT+GGG | + | chr7.4:29290971-29290990 | None:intergenic | 40.0% | |
| GTTGTTGAACTGAACCAGAA+TGG | - | chr7.4:29290698-29290717 | MS.gene52170:intron | 40.0% | |
| TAAATTTGACGCAGACTTGG+GGG | - | chr7.4:29290043-29290062 | MS.gene52170:intron | 40.0% | |
| TAAGTACAAACCTGAGCCAT+TGG | + | chr7.4:29291313-29291332 | None:intergenic | 40.0% | |
| TATATTGCGGGCACAAGTAA+TGG | - | chr7.4:29293568-29293587 | MS.gene52170:CDS | 40.0% | |
| TCAAGCACAACTGCTTAGAA+AGG | + | chr7.4:29290646-29290665 | None:intergenic | 40.0% | |
| TGAAAGTGAGTGCATCTTAG+AGG | + | chr7.4:29289953-29289972 | None:intergenic | 40.0% | |
| TGTATGGACCTATACATCAC+CGG | - | chr7.4:29291282-29291301 | MS.gene52170:CDS | 40.0% | |
| TGTGTCCATTTACTCCATTC+TGG | + | chr7.4:29290715-29290734 | None:intergenic | 40.0% | |
| TGTTAATGTCTCGGGTACAT+TGG | + | chr7.4:29290972-29290991 | None:intergenic | 40.0% | |
| TGTTGAGGATTGCATAGCTA+AGG | - | chr7.4:29290829-29290848 | MS.gene52170:intron | 40.0% | |
| TTCCTTGTGAACAGGAAAAC+CGG | - | chr7.4:29291658-29291677 | MS.gene52170:intron | 40.0% | |
| TTGAACTTCTCATGAGACTG+AGG | + | chr7.4:29289573-29289592 | None:intergenic | 40.0% | |
| TTGCCTTTCAACCTAATGGT+TGG | - | chr7.4:29292998-29293017 | MS.gene52170:intron | 40.0% | |
| TTGTCCACTACTTGACCAAT+AGG | + | chr7.4:29290942-29290961 | None:intergenic | 40.0% | |
| ! | ACTGATGTTATGGTTTGCAG+TGG | - | chr7.4:29290610-29290629 | MS.gene52170:intron | 40.0% |
| ! | AGTAATGGGAGTAGAAGCTA+TGG | - | chr7.4:29293583-29293602 | MS.gene52170:CDS | 40.0% |
| ! | CTATGATCTTTCTGAAGAGC+TGG | + | chr7.4:29290770-29290789 | None:intergenic | 40.0% |
| ! | CTGATTTTCAGAAGTCACTG+TGG | + | chr7.4:29293504-29293523 | None:intergenic | 40.0% |
| ! | GATGCACTCACTTTCAGTTT+TGG | - | chr7.4:29289957-29289976 | MS.gene52170:intron | 40.0% |
| ! | TGGTTTGCAGTGGTTACAAA+TGG | - | chr7.4:29290620-29290639 | MS.gene52170:intron | 40.0% |
| ! | TTAACCTGAGTACTGCTGAA+AGG | - | chr7.4:29291939-29291958 | MS.gene52170:intron | 40.0% |
| !! | AAAGCATTGCTGTGACAAGT+AGG | + | chr7.4:29289865-29289884 | None:intergenic | 40.0% |
| !! | ACCTTTGAAGTTACTGGGAT+AGG | - | chr7.4:29289980-29289999 | MS.gene52170:intron | 40.0% |
| !! | TAGCACTGATAATTTCCCTC+AGG | - | chr7.4:29290865-29290884 | MS.gene52170:intron | 40.0% |
| AACACCTTTCAGCAGTACTC+AGG | + | chr7.4:29291946-29291965 | None:intergenic | 45.0% | |
| AAGGCATGGTCCCATGATAA+AGG | - | chr7.4:29292196-29292215 | MS.gene52170:CDS | 45.0% | |
| AGGCATGGTCCCATGATAAA+GGG | - | chr7.4:29292197-29292216 | MS.gene52170:CDS | 45.0% | |
| AGGTGTGAGCAGTATGAATG+AGG | + | chr7.4:29289699-29289718 | None:intergenic | 45.0% | |
| ATCGTGAAACACAGCAGACA+CGG | + | chr7.4:29289506-29289525 | None:intergenic | 45.0% | |
| ATGGGAGTAGAAGCTATGGA+TGG | - | chr7.4:29293587-29293606 | MS.gene52170:CDS | 45.0% | |
| ATGGTCCCATGATAAAGGGA+GGG | - | chr7.4:29292201-29292220 | MS.gene52170:CDS | 45.0% | |
| CATACGGTTGCAATCAAGTC+AGG | - | chr7.4:29291996-29292015 | MS.gene52170:intron | 45.0% | |
| CCAATACAGAGTACAGGTTC+TGG | + | chr7.4:29291702-29291721 | None:intergenic | 45.0% | |
| CCAGAACCTGTACTCTGTAT+TGG | - | chr7.4:29291699-29291718 | MS.gene52170:intron | 45.0% | |
| CTCAACAACAGGAGATAAGC+AGG | + | chr7.4:29290816-29290835 | None:intergenic | 45.0% | |
| CTGCTTATCTCCTGTTGTTG+AGG | - | chr7.4:29290814-29290833 | MS.gene52170:intron | 45.0% | |
| GAACCTGTACTCTGTATTGG+TGG | - | chr7.4:29291702-29291721 | MS.gene52170:intron | 45.0% | |
| GAGCTGGACTTTCCATAGAT+TGG | + | chr7.4:29290754-29290773 | None:intergenic | 45.0% | |
| GAGGAAAGAGACAACATTGG+TGG | - | chr7.4:29290908-29290927 | MS.gene52170:intron | 45.0% | |
| GAGTAGAAGCTATGGATGGT+TGG | - | chr7.4:29293591-29293610 | MS.gene52170:CDS | 45.0% | |
| GCATTAAACTCTAGCCTAGG+TGG | + | chr7.4:29292799-29292818 | None:intergenic | 45.0% | |
| GCCTATCCCAGTAACTTCAA+AGG | + | chr7.4:29289984-29290003 | None:intergenic | 45.0% | |
| GCTATGCAATCCTCAACAAC+AGG | + | chr7.4:29290827-29290846 | None:intergenic | 45.0% | |
| GGTTGGATCTAGCCAATCTA+TGG | - | chr7.4:29290739-29290758 | MS.gene52170:intron | 45.0% | |
| GTAAATGGACACACAGAGGT+TGG | - | chr7.4:29290722-29290741 | MS.gene52170:intron | 45.0% | |
| GTACAGAGGCAAGAAATGGA+TGG | - | chr7.4:29291753-29291772 | MS.gene52170:CDS | 45.0% | |
| TAAACCACTCAATCCAGGCA+TGG | + | chr7.4:29292049-29292068 | None:intergenic | 45.0% | |
| TACATCACCGGAGTTTCCAA+TGG | - | chr7.4:29291294-29291313 | MS.gene52170:CDS | 45.0% | |
| TCTGCTGTGTTTCACGATCT+TGG | - | chr7.4:29289508-29289527 | MS.gene52170:CDS | 45.0% | |
| TGGAAACTCCGGTGATGTAT+AGG | + | chr7.4:29291293-29291312 | None:intergenic | 45.0% | |
| TGGAGTAAATGGACACACAG+AGG | - | chr7.4:29290718-29290737 | MS.gene52170:intron | 45.0% | |
| TGGGCATTAAACTCTAGCCT+AGG | + | chr7.4:29292802-29292821 | None:intergenic | 45.0% | |
| TGTCCAGCTCACTTTCAGAT+GGG | - | chr7.4:29291133-29291152 | MS.gene52170:intron | 45.0% | |
| TGTGATCAATGCTCTCCTGA+GGG | + | chr7.4:29290883-29290902 | None:intergenic | 45.0% | |
| TTAAAACCAAGTGCTCCGTC+AGG | + | chr7.4:29291885-29291904 | None:intergenic | 45.0% | |
| TTGAGCAGTATTGCCTCACA+TGG | - | chr7.4:29292021-29292040 | MS.gene52170:intron | 45.0% | |
| ! | AAGGGTACAGAGGCAAGAAA+TGG | - | chr7.4:29291749-29291768 | MS.gene52170:intron | 45.0% |
| ! | GAGGGAGGCATGACTTAAAA+GGG | - | chr7.4:29292219-29292238 | MS.gene52170:CDS | 45.0% |
| ! | TCACGATCTTGGCGACATTT+TGG | - | chr7.4:29289519-29289538 | MS.gene52170:CDS | 45.0% |
| !! | AGCTTTTGGAAAGGGTACAG+AGG | - | chr7.4:29291739-29291758 | MS.gene52170:intron | 45.0% |
| !! | GAGCATTGATCACACTCTTG+AGG | - | chr7.4:29290889-29290908 | MS.gene52170:intron | 45.0% |
| !! | GCACCAACCATTAGGTTGAA+AGG | + | chr7.4:29293004-29293023 | None:intergenic | 45.0% |
| !! | TCAAAATAAATAAATTATAA+AGG | - | chr7.4:29290476-29290495 | MS.gene52170:intron | 5.0% |
| ACATTTACCTTGAGCTCGCG+GGG | - | chr7.4:29292294-29292313 | MS.gene52170:CDS | 50.0% | |
| ACCTGAGCCATTGGAAACTC+CGG | + | chr7.4:29291304-29291323 | None:intergenic | 50.0% | |
| AGACGCTCCACAACACAAAC+TGG | - | chr7.4:29292271-29292290 | MS.gene52170:CDS | 50.0% | |
| AGAGTTTAATGCCCAGACCC+TGG | - | chr7.4:29292807-29292826 | MS.gene52170:intron | 50.0% | |
| AGGTGTGTGTTTGTGTGGTG+GGG | - | chr7.4:29292318-29292337 | MS.gene52170:CDS | 50.0% | |
| ATACTGTGGTCCCATCTACC+AGG | + | chr7.4:29292828-29292847 | None:intergenic | 50.0% | |
| ATGCCTCCCTCCCTTTATCA+TGG | + | chr7.4:29292210-29292229 | None:intergenic | 50.0% | |
| CAAGTGTCTGGATGATCCAG+CGG | - | chr7.4:29289473-29289492 | MS.gene52170:CDS | 50.0% | |
| CAGTGAGTTTGTCTAGCTGC+TGG | - | chr7.4:29292591-29292610 | MS.gene52170:intron | 50.0% | |
| CATGGTCCCATGATAAAGGG+AGG | - | chr7.4:29292200-29292219 | MS.gene52170:CDS | 50.0% | |
| CCACGAATGCACCAACCATT+AGG | + | chr7.4:29293012-29293031 | None:intergenic | 50.0% | |
| CCTCTCAAACCCTAAACCCT+AGG | - | chr7.4:29292074-29292093 | MS.gene52170:CDS | 50.0% | |
| CTGCTTAATTCGGGCACGTT+TGG | - | chr7.4:29292870-29292889 | MS.gene52170:intron | 50.0% | |
| CTGTCCAGCTCACTTTCAGA+TGG | - | chr7.4:29291132-29291151 | MS.gene52170:intron | 50.0% | |
| GAAGCGTGAACTTCTGTAGC+CGG | + | chr7.4:29291680-29291699 | None:intergenic | 50.0% | |
| GACATTTACCTTGAGCTCGC+GGG | - | chr7.4:29292293-29292312 | MS.gene52170:CDS | 50.0% | |
| GAGGTGTGTGTTTGTGTGGT+GGG | - | chr7.4:29292317-29292336 | MS.gene52170:CDS | 50.0% | |
| GGACATTTACCTTGAGCTCG+CGG | - | chr7.4:29292292-29292311 | MS.gene52170:CDS | 50.0% | |
| GTCCAGCTCACTTTCAGATG+GGG | - | chr7.4:29291134-29291153 | MS.gene52170:intron | 50.0% | |
| GTGTGATCAATGCTCTCCTG+AGG | + | chr7.4:29290884-29290903 | None:intergenic | 50.0% | |
| GTTGATATTCTTGGGCCCTC+TGG | - | chr7.4:29293437-29293456 | MS.gene52170:intron | 50.0% | |
| TACTGTGGTCCCATCTACCA+GGG | + | chr7.4:29292827-29292846 | None:intergenic | 50.0% | |
| TGCCTCCCTCCCTTTATCAT+GGG | + | chr7.4:29292209-29292228 | None:intergenic | 50.0% | |
| ! | AATAAGCCTGACGGAGCACT+TGG | - | chr7.4:29291876-29291895 | MS.gene52170:CDS | 50.0% |
| ! | AGTCACTGTGGGTTGACAGT+TGG | + | chr7.4:29293492-29293511 | None:intergenic | 50.0% |
| ! | CCTAATGGTTGGTGCATTCG+TGG | - | chr7.4:29293009-29293028 | MS.gene52170:intron | 50.0% |
| ! | CCTAGGGTTTAGGGTTTGAG+AGG | + | chr7.4:29292077-29292096 | None:intergenic | 50.0% |
| ! | GGAGGGAGGCATGACTTAAA+AGG | - | chr7.4:29292218-29292237 | MS.gene52170:CDS | 50.0% |
| ! | GTCACTGTGGGTTGACAGTT+GGG | + | chr7.4:29293491-29293510 | None:intergenic | 50.0% |
| !! | AGCCGGTTTTCCTGTTCACA+AGG | + | chr7.4:29291663-29291682 | None:intergenic | 50.0% |
| AATGCCCAGACCCTGGTAGA+TGG | - | chr7.4:29292814-29292833 | MS.gene52170:intron | 55.0% | |
| ACCGGAGTTTCCAATGGCTC+AGG | - | chr7.4:29291300-29291319 | MS.gene52170:CDS | 55.0% | |
| ATGCCCAGACCCTGGTAGAT+GGG | - | chr7.4:29292815-29292834 | MS.gene52170:intron | 55.0% | |
| CATTTACCTTGAGCTCGCGG+GGG | - | chr7.4:29292295-29292314 | MS.gene52170:CDS | 55.0% | |
| GACCCCATCTGAAAGTGAGC+TGG | + | chr7.4:29291139-29291158 | None:intergenic | 55.0% | |
| GGAACCATGCCTGGATTGAG+TGG | - | chr7.4:29292042-29292061 | MS.gene52170:CDS | 55.0% | |
| GTCCCATGATAAAGGGAGGG+AGG | - | chr7.4:29292204-29292223 | MS.gene52170:CDS | 55.0% | |
| TCCAGGCATGGTTCCATGTG+AGG | + | chr7.4:29292037-29292056 | None:intergenic | 55.0% | |
| TGGGGGCTAACTCAGGCATA+AGG | - | chr7.4:29290060-29290079 | MS.gene52170:intron | 55.0% | |
| ! | GGAGGTGTGTGTTTGTGTGG+TGG | - | chr7.4:29292316-29292335 | MS.gene52170:CDS | 55.0% |
| ! | GTTTGTGTGGTGGGGTGGTT+GGG | - | chr7.4:29292326-29292345 | MS.gene52170:CDS | 55.0% |
| ! | TGTGTGTTTGTGTGGTGGGG+TGG | - | chr7.4:29292321-29292340 | MS.gene52170:CDS | 55.0% |
| ! | TGTTTGTGTGGTGGGGTGGT+TGG | - | chr7.4:29292325-29292344 | MS.gene52170:CDS | 55.0% |
| ! | TTTGTGTGGTGGGGTGGTTG+GGG | - | chr7.4:29292327-29292346 | MS.gene52170:CDS | 55.0% |
| CAGTTGCGACTGCAACCCAC+TGG | + | chr7.4:29290533-29290552 | None:intergenic | 60.0% | |
| GCAGACTTGGGGGCTAACTC+AGG | - | chr7.4:29290053-29290072 | MS.gene52170:intron | 60.0% | |
| GCCTCACATGGAACCATGCC+TGG | - | chr7.4:29292033-29292052 | MS.gene52170:CDS | 60.0% | |
| GGTCCCATCTACCAGGGTCT+GGG | + | chr7.4:29292821-29292840 | None:intergenic | 60.0% | |
| TGGTCCCATCTACCAGGGTC+TGG | + | chr7.4:29292822-29292841 | None:intergenic | 60.0% | |
| ! | GGGGGAGGTGTGTGTTTGTG+TGG | - | chr7.4:29292313-29292332 | MS.gene52170:CDS | 60.0% |
| ! | TTGTGTGGTGGGGTGGTTGG+GGG | - | chr7.4:29292328-29292347 | MS.gene52170:CDS | 60.0% |
| !! | CAGACACGGACTAGATCCGC+TGG | + | chr7.4:29289492-29289511 | None:intergenic | 60.0% |
| !! | CAGTGGGTTGCAGTCGCAAC+TGG | - | chr7.4:29290531-29290550 | MS.gene52170:intron | 60.0% |
| TTACCTTGAGCTCGCGGGGG+AGG | - | chr7.4:29292298-29292317 | MS.gene52170:CDS | 65.0% | |
| ! | TGGGTTGACAGTTGGGCCCG+TGG | + | chr7.4:29293484-29293503 | None:intergenic | 65.0% |
| ! | TGTGTGGTGGGGTGGTTGGG+GGG | - | chr7.4:29292329-29292348 | MS.gene52170:CDS | 65.0% |
| ACACCTCCCCCGCGAGCTCA+AGG | + | chr7.4:29292304-29292323 | None:intergenic | 70.0% | |
| ! | GGGGGGGGGGGTATGGAAGT+TGG | - | chr7.4:29292361-29292380 | MS.gene52170:CDS | 70.0% |
| ! | GTGTGGTGGGGTGGTTGGGG+GGG | - | chr7.4:29292330-29292349 | MS.gene52170:CDS | 70.0% |
| ! | TGTGGTGGGGTGGTTGGGGG+GGG | - | chr7.4:29292331-29292350 | MS.gene52170:CDS | 70.0% |
| TGGTGGGGTGGTTGGGGGGG+GGG | - | chr7.4:29292333-29292352 | MS.gene52170:CDS | 75.0% | |
| ! | GTGGTGGGGTGGTTGGGGGG+GGG | - | chr7.4:29292332-29292351 | MS.gene52170:CDS | 75.0% |
| ! | GGTGGGGTGGTTGGGGGGGG+GGG | - | chr7.4:29292334-29292353 | MS.gene52170:CDS | 80.0% |
| ! | GTGGGGTGGTTGGGGGGGGG+GGG | - | chr7.4:29292335-29292354 | MS.gene52170:CDS | 80.0% |
| ! | TGGGGTGGTTGGGGGGGGGG+GGG | - | chr7.4:29292336-29292355 | MS.gene52170:CDS | 80.0% |
| ! | GGGGTGGTTGGGGGGGGGGG+GGG | - | chr7.4:29292337-29292356 | MS.gene52170:CDS | 85.0% |
| ! | GGGTGGTTGGGGGGGGGGGG+GGG | - | chr7.4:29292338-29292357 | MS.gene52170:CDS | 85.0% |
| ! | GGTGGTTGGGGGGGGGGGGG+GGG | - | chr7.4:29292339-29292358 | MS.gene52170:CDS | 85.0% |
| ! | GTGGTTGGGGGGGGGGGGGG+GGG | - | chr7.4:29292340-29292359 | MS.gene52170:CDS | 85.0% |
| ! | TGGTTGGGGGGGGGGGGGGG+GGG | - | chr7.4:29292341-29292360 | MS.gene52170:CDS | 85.0% |
| ! | GGGGGGGGGGGGGGGGGGTA+TGG | - | chr7.4:29292354-29292373 | MS.gene52170:CDS | 90.0% |
| ! | GGTTGGGGGGGGGGGGGGGG+GGG | - | chr7.4:29292342-29292361 | MS.gene52170:CDS | 90.0% |
| ! | GTTGGGGGGGGGGGGGGGGG+GGG | - | chr7.4:29292343-29292362 | MS.gene52170:CDS | 90.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr7.4:29292344-29292363 | MS.gene52170:CDS | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr7.4:29292345-29292364 | MS.gene52170:CDS | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 29289405 | 29293667 | 29289405 | ID=MS.gene52170 |
| chr7.4 | mRNA | 29289405 | 29293667 | 29289405 | ID=MS.gene52170.t1;Parent=MS.gene52170 |
| chr7.4 | exon | 29293532 | 29293667 | 29293532 | ID=MS.gene52170.t1.exon1;Parent=MS.gene52170.t1 |
| chr7.4 | CDS | 29293532 | 29293667 | 29293532 | ID=cds.MS.gene52170.t1;Parent=MS.gene52170.t1 |
| chr7.4 | exon | 29292023 | 29292442 | 29292023 | ID=MS.gene52170.t1.exon2;Parent=MS.gene52170.t1 |
| chr7.4 | CDS | 29292023 | 29292442 | 29292023 | ID=cds.MS.gene52170.t1;Parent=MS.gene52170.t1 |
| chr7.4 | exon | 29291751 | 29291932 | 29291751 | ID=MS.gene52170.t1.exon3;Parent=MS.gene52170.t1 |
| chr7.4 | CDS | 29291751 | 29291932 | 29291751 | ID=cds.MS.gene52170.t1;Parent=MS.gene52170.t1 |
| chr7.4 | exon | 29291282 | 29291400 | 29291282 | ID=MS.gene52170.t1.exon4;Parent=MS.gene52170.t1 |
| chr7.4 | CDS | 29291282 | 29291400 | 29291282 | ID=cds.MS.gene52170.t1;Parent=MS.gene52170.t1 |
| chr7.4 | exon | 29289405 | 29289684 | 29289405 | ID=MS.gene52170.t1.exon5;Parent=MS.gene52170.t1 |
| chr7.4 | CDS | 29289405 | 29289684 | 29289405 | ID=cds.MS.gene52170.t1;Parent=MS.gene52170.t1 |
| Gene Sequence |
| Protein sequence |
