Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52582.t1 | XP_013449368.1 | 99 | 597 | 5 | 1 | 1 | 597 | 1 | 596 | 0.00E+00 | 1191.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52582.t1 | Q9STY4 | 70.2 | 597 | 157 | 5 | 12 | 594 | 9 | 598 | 1.2e-236 | 820.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52582.t1 | A0A072U1X8 | 99.0 | 597 | 5 | 1 | 1 | 597 | 1 | 596 | 0.0e+00 | 1191.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene52582 | 0.823597 | 1.27E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene52582 | 0.802236 | 6.17E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene52582 | 0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene52582 | 0.807473 | 4.97E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene52582 | 0.810409 | 1.17E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene52582 | 0.804836 | 1.78E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene52582 | 0.829073 | 6.31E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene52582 | 0.800852 | 1.19E-48 | -1.69E-46 |
| MS.gene050904 | MS.gene52582 | 0.812804 | 3.53E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene52582 | 0.817677 | 2.91E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene52582 | 0.810961 | 8.88E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene52582 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene051858 | MS.gene52582 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene051941 | MS.gene52582 | 0.814573 | 1.44E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene52582 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene52582 | 0.828871 | 7.07E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene52582 | 0.818123 | 2.31E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene52582 | 0.82418 | 9.28E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene52582 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene52582 | 0.810757 | 9.84E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene52582 | 0.805886 | 1.07E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene52582 | 0.817049 | 4.03E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene52582 | 0.830799 | 2.40E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene52582 | 0.815655 | 8.27E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene52582 | 0.812807 | 3.52E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene52582 | 0.832225 | 1.07E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene52582 | 0.805714 | 1.17E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene52582 | 0.810942 | 8.97E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene52582 | 0.802183 | 6.33E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene52582 | 0.81191 | 5.53E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene52582 | 0.856365 | 3.38E-62 | -1.69E-46 |
| MS.gene056409 | MS.gene52582 | 0.804768 | 1.84E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene52582 | 0.824247 | 8.95E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene52582 | 0.808821 | 2.57E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene52582 | 0.809599 | 1.75E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene52582 | 0.805435 | 1.34E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene52582 | 0.844036 | 9.69E-59 | -1.69E-46 |
| MS.gene058120 | MS.gene52582 | 0.817808 | 2.72E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene52582 | 0.806522 | 7.90E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene52582 | 0.83603 | 1.19E-56 | -1.69E-46 |
| MS.gene058700 | MS.gene52582 | 0.803173 | 3.95E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene52582 | 0.827155 | 1.83E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene52582 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene52582 | 0.814602 | 1.42E-51 | -1.69E-46 |
| MS.gene059756 | MS.gene52582 | 0.808596 | 2.87E-50 | -1.69E-46 |
| MS.gene059801 | MS.gene52582 | 0.811518 | 6.72E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene52582 | 0.812954 | 3.27E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene52582 | 0.824356 | 8.44E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene52582 | 0.815519 | 8.87E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52582.t1 | MTR_7g080117 | 98.995 | 597 | 5 | 1 | 1 | 597 | 1 | 596 | 0.0 | 1225 |
| MS.gene52582.t1 | MTR_7g080117 | 98.627 | 510 | 6 | 1 | 1 | 510 | 1 | 509 | 0.0 | 1047 |
| MS.gene52582.t1 | MTR_4g119220 | 28.363 | 342 | 218 | 8 | 21 | 352 | 63 | 387 | 2.63e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52582.t1 | AT3G47390 | 74.150 | 588 | 146 | 4 | 12 | 594 | 9 | 595 | 0.0 | 904 |
| MS.gene52582.t1 | AT3G47390 | 70.519 | 597 | 155 | 6 | 12 | 594 | 9 | 598 | 0.0 | 850 |
| MS.gene52582.t1 | AT4G20960 | 27.922 | 308 | 197 | 8 | 32 | 333 | 74 | 362 | 4.08e-22 | 99.8 |
Find 156 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTCCCCATGATCTCTTT+TGG | 0.157667 | 7.4:-26033266 | MS.gene52582:CDS |
| CCTATTCTAGCAGCTTCTTC+TGG | 0.242745 | 7.4:+26033763 | None:intergenic |
| CTTTAGACGCAAGCAGCTTC+TGG | 0.243341 | 7.4:+26034999 | None:intergenic |
| CCATCTCCTGTGGGTGATCT+TGG | 0.250546 | 7.4:-26034350 | MS.gene52582:CDS |
| ATTCAAATGCCTGATGAAAA+TGG | 0.287858 | 7.4:-26033980 | MS.gene52582:CDS |
| TGCTGTGTCTGCCCTACTTC+AGG | 0.295221 | 7.4:-26036513 | MS.gene52582:intron |
| TTTGTTGCTCCTAAAATTAT+TGG | 0.320816 | 7.4:-26034386 | MS.gene52582:CDS |
| TACCTCCCCTGCCGAAGTTC+AGG | 0.321275 | 7.4:-26036618 | MS.gene52582:CDS |
| TCCCATAGGTTTGCCTCCTC+TGG | 0.337323 | 7.4:+26035076 | None:intergenic |
| GGATTGCAAGTTGATCTTCT+TGG | 0.339246 | 7.4:-26036319 | MS.gene52582:CDS |
| TACTACTGCAAAGGATTGTT+TGG | 0.342245 | 7.4:-26033809 | MS.gene52582:CDS |
| GGGGTCAAAAGGGTTGTTAT+TGG | 0.344452 | 7.4:-26036400 | MS.gene52582:CDS |
| ATTAAATCCGCGGGATGTTA+TGG | 0.355275 | 7.4:-26034951 | MS.gene52582:CDS |
| CCATGTCTGGCTGTCAATCT+TGG | 0.358207 | 7.4:+26035148 | None:intergenic |
| TGCTTTGCATTTGCAGATGA+TGG | 0.358381 | 7.4:+26036805 | None:intergenic |
| TAAACTAGGGTGGGGTCAAA+AGG | 0.367576 | 7.4:-26036411 | MS.gene52582:intron |
| GGAATTGTCGGTGCCGTATC+TGG | 0.388005 | 7.4:+26034121 | None:intergenic |
| CATCTCCTGTGGGTGATCTT+GGG | 0.394148 | 7.4:-26034349 | MS.gene52582:CDS |
| ACCTGCAGATAAGGCCTGAT+TGG | 0.404509 | 7.4:-26033398 | MS.gene52582:intron |
| ATCTTCATGTTGTCCCAATC+AGG | 0.408250 | 7.4:+26033384 | None:intergenic |
| GCTGCGTCTGCTATTTCGTC+TGG | 0.408450 | 7.4:-26034872 | MS.gene52582:CDS |
| GCTGCTTTCAACTGCCGGTT+CGG | 0.409041 | 7.4:-26033301 | MS.gene52582:CDS |
| ACCCCTCTGTGTTACAACTA+TGG | 0.410725 | 7.4:+26035036 | None:intergenic |
| CCAGAAGAAGCTGCTAGAAT+AGG | 0.417213 | 7.4:-26033763 | MS.gene52582:CDS |
| GGCTCCACGGCAACGCTCGC+CGG | 0.419042 | 7.4:+26036583 | None:intergenic |
| GGTCCAGACATGCTTGTTAG+TGG | 0.427768 | 7.4:-26034160 | MS.gene52582:CDS |
| CATATGTCCACCTCCATGTC+TGG | 0.434550 | 7.4:+26035135 | None:intergenic |
| CTCCTCCCCAAAAGAGATCA+TGG | 0.435722 | 7.4:+26033259 | None:intergenic |
| GCGATGACGCAGCCGAAGTT+GGG | 0.438649 | 7.4:+26036689 | None:intergenic |
| AGCATACTTGAGAACAGAAA+AGG | 0.439969 | 7.4:+26035518 | None:intergenic |
| AATCCACTAACAAGCATGTC+TGG | 0.442951 | 7.4:+26034157 | None:intergenic |
| ACAAAGGCAGCGTCCTGATC+TGG | 0.443695 | 7.4:-26033731 | MS.gene52582:intron |
| GGCGATGACGCAGCCGAAGT+TGG | 0.446690 | 7.4:+26036688 | None:intergenic |
| TCCGGCGATGTCGCCGGTGA+AGG | 0.456323 | 7.4:-26036659 | MS.gene52582:CDS |
| AGTCACCAGGTTCCATGTTC+AGG | 0.469375 | 7.4:+26036552 | None:intergenic |
| CTGCTAGCACTGGCCATGCA+TGG | 0.471816 | 7.4:-26035351 | MS.gene52582:CDS |
| CAGAAGCTGCTTGCGTCTAA+AGG | 0.475517 | 7.4:-26034998 | MS.gene52582:CDS |
| ACAACCACGCGCTCGACGCC+GGG | 0.481082 | 7.4:-26036769 | MS.gene52582:CDS |
| CACTAGTAGTAAGATTATAG+AGG | 0.488783 | 7.4:-26036287 | MS.gene52582:intron |
| TCTTCAACCGTTACCAGATA+CGG | 0.490264 | 7.4:-26034134 | MS.gene52582:CDS |
| GTAACGGCCTGAACTTCGGC+AGG | 0.490513 | 7.4:+26036611 | None:intergenic |
| AGCCTCAACTAGAACCGAAC+CGG | 0.490853 | 7.4:+26033287 | None:intergenic |
| CGCGTAGAGGTAACCTTCAC+CGG | 0.491469 | 7.4:+26036646 | None:intergenic |
| TCCTGTGGGTGATCTTGGGA+TGG | 0.493024 | 7.4:-26034345 | MS.gene52582:CDS |
| TTCCTCTAAAATGTTGCAAA+GGG | 0.493936 | 7.4:+26036368 | None:intergenic |
| GTTGCTCCTAAAATTATTGG+TGG | 0.494160 | 7.4:-26034383 | MS.gene52582:CDS |
| ACCGGCGACATCGCCGGAGG+GGG | 0.494201 | 7.4:+26036664 | None:intergenic |
| CACAACCACGCGCTCGACGC+CGG | 0.496670 | 7.4:-26036770 | MS.gene52582:CDS |
| TCTATGCTGCTTTCAACTGC+CGG | 0.499219 | 7.4:-26033306 | MS.gene52582:CDS |
| AATCGATGTTTGCTATCAGC+AGG | 0.499777 | 7.4:-26034297 | MS.gene52582:intron |
| CCTGCAGATAAGGCCTGATT+GGG | 0.500182 | 7.4:-26033397 | MS.gene52582:intron |
| TTCCAGAGGAGGCAAACCTA+TGG | 0.503763 | 7.4:-26035078 | MS.gene52582:CDS |
| TGCCGGTTCGGTTCTAGTTG+AGG | 0.505390 | 7.4:-26033289 | MS.gene52582:CDS |
| ACTTCTCCTCATCCCAACTT+CGG | 0.506879 | 7.4:-26036701 | MS.gene52582:CDS |
| CAACAAGGCAAACCTGAAGT+AGG | 0.507837 | 7.4:+26036501 | None:intergenic |
| ATAAAAGTTTCCGCTGGTGA+TGG | 0.509010 | 7.4:+26034100 | None:intergenic |
| GGCGGATTTGTCAGCGATGA+GGG | 0.514160 | 7.4:+26036730 | None:intergenic |
| AATATGATGCTGGATTCATA+TGG | 0.519826 | 7.4:+26034058 | None:intergenic |
| CTGGGAATGTGGAGGAACAT+TGG | 0.521107 | 7.4:-26034894 | MS.gene52582:CDS |
| TCCGCTGGTGATGGAATTGT+CGG | 0.525819 | 7.4:+26034109 | None:intergenic |
| CAGCGATGAGGGCGGCGCGT+CGG | 0.526230 | 7.4:+26036741 | None:intergenic |
| TCCTCCCCAAAAGAGATCAT+GGG | 0.530278 | 7.4:+26033260 | None:intergenic |
| TCAAAGGAGCGTTAACAAGA+AGG | 0.530304 | 7.4:+26035565 | None:intergenic |
| ACGCTCGCCGGCGGAAGTAA+CGG | 0.532940 | 7.4:+26036595 | None:intergenic |
| ACCTTCACCGGCGACATCGC+CGG | 0.537703 | 7.4:+26036658 | None:intergenic |
| GGGATGAGGAGAAGTGAAAC+CGG | 0.538335 | 7.4:+26036709 | None:intergenic |
| TCCGCCGGCGAGCGTTGCCG+TGG | 0.540138 | 7.4:-26036587 | MS.gene52582:CDS |
| GCATACTTGAGAACAGAAAA+GGG | 0.542072 | 7.4:+26035519 | None:intergenic |
| GGAAGTAACGGCCTGAACTT+CGG | 0.544526 | 7.4:+26036607 | None:intergenic |
| AATGAGAAAGTGTTGGCGAT+TGG | 0.544596 | 7.4:+26036833 | None:intergenic |
| GTGTTGGGTCATACCAGATC+AGG | 0.544618 | 7.4:+26033718 | None:intergenic |
| TCCACGGCAACGCTCGCCGG+CGG | 0.544849 | 7.4:+26036586 | None:intergenic |
| TTTCCTCTAAAATGTTGCAA+AGG | 0.545620 | 7.4:+26036367 | None:intergenic |
| GGAGAAGGCTTGAATTATCT+CGG | 0.546128 | 7.4:-26033228 | MS.gene52582:CDS |
| GGCGCACAAGTTCGTTGGAG+TGG | 0.548370 | 7.4:-26033836 | MS.gene52582:CDS |
| GCCTAGGCGCACAAGTTCGT+TGG | 0.548390 | 7.4:-26033841 | MS.gene52582:intron |
| GTTCAGGCCGTTACTTCCGC+CGG | 0.550199 | 7.4:-26036602 | MS.gene52582:CDS |
| AAACTAGGGTGGGGTCAAAA+GGG | 0.550454 | 7.4:-26036410 | MS.gene52582:intron |
| AGAAGCGATGCAATCATTGT+GGG | 0.552806 | 7.4:-26035280 | MS.gene52582:CDS |
| GTTTGACATATTAAATCCGC+GGG | 0.554131 | 7.4:-26034960 | MS.gene52582:CDS |
| TACCATAGTTGTAACACAGA+GGG | 0.554429 | 7.4:-26035038 | MS.gene52582:CDS |
| TGCAGCTTATCCACCATGCA+TGG | 0.556200 | 7.4:+26035338 | None:intergenic |
| GATTCATATGGAGAGACAGT+AGG | 0.557834 | 7.4:+26034070 | None:intergenic |
| CACCGGCGACATCGCCGGAG+GGG | 0.557977 | 7.4:+26036663 | None:intergenic |
| TCCAGAGGAGGCAAACCTAT+GGG | 0.558460 | 7.4:-26035077 | MS.gene52582:CDS |
| CCAAGATCACCCACAGGAGA+TGG | 0.558536 | 7.4:+26034350 | None:intergenic |
| AACGGCCTGAACTTCGGCAG+GGG | 0.559238 | 7.4:+26036613 | None:intergenic |
| TCAGGCATTTGAATGGGATG+AGG | 0.559838 | 7.4:+26033989 | None:intergenic |
| GCAAGTTGATCTTCTTGGAG+AGG | 0.566968 | 7.4:-26036314 | MS.gene52582:CDS |
| CCAAGATTGACAGCCAGACA+TGG | 0.570075 | 7.4:-26035148 | MS.gene52582:CDS |
| ATTGAGATCAGAGTTTCTTG+AGG | 0.571669 | 7.4:-26033190 | MS.gene52582:CDS |
| ACGCAGCCGAAGTTGGGATG+AGG | 0.573519 | 7.4:+26036695 | None:intergenic |
| ATTCATATGGAGAGACAGTA+GGG | 0.574668 | 7.4:+26034071 | None:intergenic |
| GGCCTGAACTTCGGCAGGGG+AGG | 0.575137 | 7.4:+26036616 | None:intergenic |
| GGAGGAGGTCGAGAAGGAGA+AGG | 0.575738 | 7.4:-26033243 | MS.gene52582:CDS |
| AACAAGGCAAACCTGAAGTA+GGG | 0.576393 | 7.4:+26036502 | None:intergenic |
| AAATACTATACTGCTAAACT+AGG | 0.581783 | 7.4:+26033141 | None:intergenic |
| CTCATCGCTGACAAATCCGC+CGG | 0.584944 | 7.4:-26036728 | MS.gene52582:CDS |
| GTCCCTCGATCTTCCAGAGG+AGG | 0.585588 | 7.4:-26035089 | MS.gene52582:CDS |
| TGCCTCCTCTGGAAGATCGA+GGG | 0.585777 | 7.4:+26035087 | None:intergenic |
| GTCGGTGCCGTATCTGGTAA+CGG | 0.587126 | 7.4:+26034127 | None:intergenic |
| GAAGGTTACCTCTACGCGCA+AGG | 0.589031 | 7.4:-26036641 | MS.gene52582:CDS |
| TTGTAACACAGAGGGGTGCA+AGG | 0.590044 | 7.4:-26035030 | MS.gene52582:CDS |
| GTGCGTGCACTTAGAAGTCA+AGG | 0.591377 | 7.4:-26036340 | MS.gene52582:CDS |
| TAGAAGCGATGCAATCATTG+TGG | 0.591803 | 7.4:-26035281 | MS.gene52582:CDS |
| TTGTCACCGTCACAGTCACC+AGG | 0.594772 | 7.4:+26036539 | None:intergenic |
| AGCCACTGCTTACCTGAACA+TGG | 0.597294 | 7.4:-26036564 | MS.gene52582:CDS |
| GCTTACCTGAACATGGAACC+TGG | 0.598291 | 7.4:-26036557 | MS.gene52582:CDS |
| TCACCGGCGACATCGCCGGA+GGG | 0.599252 | 7.4:+26036662 | None:intergenic |
| TATACCCGGCGTCGAGCGCG+TGG | 0.604200 | 7.4:+26036765 | None:intergenic |
| GCAGCATAGAACTCAAATGC+GGG | 0.604823 | 7.4:+26033319 | None:intergenic |
| GAAGAAGCTCTACAAATCAA+AGG | 0.605213 | 7.4:+26035549 | None:intergenic |
| AAAATGGCGAAAACGTGACT+TGG | 0.606051 | 7.4:-26033964 | MS.gene52582:CDS |
| TGGGAGGAAATACAGTTCGA+AGG | 0.607145 | 7.4:-26035261 | MS.gene52582:CDS |
| TCAGGTAAGCAGTGGCTCCA+CGG | 0.608613 | 7.4:+26036570 | None:intergenic |
| AAACCTCAGACATGTCCCAT+AGG | 0.614924 | 7.4:+26035062 | None:intergenic |
| CGGCGGATTTGTCAGCGATG+AGG | 0.618167 | 7.4:+26036729 | None:intergenic |
| TTCACCGGCGACATCGCCGG+AGG | 0.620959 | 7.4:+26036661 | None:intergenic |
| TTCCATGTTCAGGTAAGCAG+TGG | 0.622564 | 7.4:+26036562 | None:intergenic |
| TATAAAACATGGGATCCTCA+TGG | 0.624108 | 7.4:-26034031 | MS.gene52582:CDS |
| AGTGGATGATACTACTGCAA+AGG | 0.626634 | 7.4:-26033818 | MS.gene52582:CDS |
| AAACGTGACTTGGTTGAGTG+TGG | 0.626984 | 7.4:-26033954 | MS.gene52582:CDS |
| GGGAGGAAATACAGTTCGAA+GGG | 0.627348 | 7.4:-26035260 | MS.gene52582:CDS |
| AAGAAGCTGCTAGAATAGGA+AGG | 0.627823 | 7.4:-26033759 | MS.gene52582:CDS |
| GAAGATCGATGTCATGTACT+CGG | 0.628310 | 7.4:-26033367 | MS.gene52582:CDS |
| AAACCTATGGGACATGTCTG+AGG | 0.629695 | 7.4:-26035065 | MS.gene52582:CDS |
| TTGCCTCCTCTGGAAGATCG+AGG | 0.633064 | 7.4:+26035086 | None:intergenic |
| GAGTGTGGAGCATTACTACC+AGG | 0.633117 | 7.4:-26033939 | MS.gene52582:intron |
| TTGACAGCCAGACATGGAGG+TGG | 0.633158 | 7.4:-26035142 | MS.gene52582:CDS |
| GAATAGGAAGGTCAATACAA+AGG | 0.635333 | 7.4:-26033747 | MS.gene52582:CDS |
| TCAGCAATAAAAGTTTCCGC+TGG | 0.638266 | 7.4:+26034094 | None:intergenic |
| TGAGACATTACAATGCGTAT+CGG | 0.639633 | 7.4:+26035112 | None:intergenic |
| CTAGCACTGGCCATGCATGG+TGG | 0.640844 | 7.4:-26035348 | MS.gene52582:CDS |
| AGTTTGACATATTAAATCCG+CGG | 0.643413 | 7.4:-26034961 | MS.gene52582:CDS |
| TCAGTCCCTCGATCTTCCAG+AGG | 0.644283 | 7.4:-26035092 | MS.gene52582:CDS |
| TTCGTCTGGAGTAATTCACA+AGG | 0.644402 | 7.4:-26034858 | MS.gene52582:intron |
| CCTCCCCAAAAGAGATCATG+GGG | 0.647142 | 7.4:+26033261 | None:intergenic |
| GGATGAGAATGAGAAAGTGT+TGG | 0.647313 | 7.4:+26036826 | None:intergenic |
| AAAGAATGCACCATCTCCTG+TGG | 0.647393 | 7.4:-26034360 | MS.gene52582:CDS |
| GGCGGCGCGTCGGATATACC+CGG | 0.654145 | 7.4:+26036751 | None:intergenic |
| AAATACTCCATAACATCCCG+CGG | 0.656854 | 7.4:+26034944 | None:intergenic |
| GGATTTGTCAGCGATGAGGG+CGG | 0.660555 | 7.4:+26036733 | None:intergenic |
| AGCGATGCAATCATTGTGGG+AGG | 0.663446 | 7.4:-26035277 | MS.gene52582:CDS |
| GGGAGGTACCTTGCGCGTAG+AGG | 0.664030 | 7.4:+26036633 | None:intergenic |
| ACCATCCCAAGATCACCCAC+AGG | 0.664172 | 7.4:+26034344 | None:intergenic |
| TAACGGCCTGAACTTCGGCA+GGG | 0.670902 | 7.4:+26036612 | None:intergenic |
| AAGTATGCTATGACTCTCGA+TGG | 0.677384 | 7.4:-26035504 | MS.gene52582:intron |
| AAATTTGACAATGCACCATG+AGG | 0.688050 | 7.4:+26034016 | None:intergenic |
| ATGAGGAGAAGTGAAACCGG+CGG | 0.688211 | 7.4:+26036712 | None:intergenic |
| AGCAGCATAGAACTCAAATG+CGG | 0.691668 | 7.4:+26033318 | None:intergenic |
| ATGGAACCTGGTGACTGTGA+CGG | 0.698388 | 7.4:-26036545 | MS.gene52582:CDS |
| ACCGACAATTCCATCACCAG+CGG | 0.698989 | 7.4:-26034110 | MS.gene52582:CDS |
| AAGAATGCACCATCTCCTGT+GGG | 0.705424 | 7.4:-26034359 | MS.gene52582:CDS |
| AGATTGACAGCCAGACATGG+AGG | 0.708948 | 7.4:-26035145 | MS.gene52582:CDS |
| ACCATAGTTGTAACACAGAG+GGG | 0.730677 | 7.4:-26035037 | MS.gene52582:CDS |
| CTACCATAGTTGTAACACAG+AGG | 0.759254 | 7.4:-26035039 | MS.gene52582:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGACATATATTTTTAAT+TGG | + | chr7.4:26035774-26035793 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAGAAATGTTAT+TGG | - | chr7.4:26035228-26035247 | MS.gene52582:intron | 10.0% |
| !!! | ATAGAAAATAATGATAATGA+TGG | + | chr7.4:26034770-26034789 | None:intergenic | 15.0% |
| !!! | ATTTTACCTTAAAATATGTT+GGG | - | chr7.4:26035550-26035569 | MS.gene52582:CDS | 15.0% |
| !!! | CATATTTTTCTATAAAACAT+GGG | - | chr7.4:26035953-26035972 | MS.gene52582:intron | 15.0% |
| !!! | TCATATTTTTCTATAAAACA+TGG | - | chr7.4:26035952-26035971 | MS.gene52582:intron | 15.0% |
| !! | AAATCAACTTTAAACAATCT+CGG | + | chr7.4:26035377-26035396 | None:intergenic | 20.0% |
| !! | ATAATATGAAGTTCAATACA+AGG | + | chr7.4:26033941-26033960 | None:intergenic | 20.0% |
| !! | TTGTATTGAACTTCATATTA+TGG | - | chr7.4:26033940-26033959 | MS.gene52582:CDS | 20.0% |
| !! | TTTATAGAAAAATATGATGC+TGG | + | chr7.4:26035949-26035968 | None:intergenic | 20.0% |
| !!! | AAACTTTTTGTTGTTGAAAA+GGG | - | chr7.4:26034246-26034265 | MS.gene52582:intron | 20.0% |
| !!! | ATAAATTTAATTTGATGCCT+AGG | - | chr7.4:26036137-26036156 | MS.gene52582:intron | 20.0% |
| !!! | GATTTTACCTTAAAATATGT+TGG | - | chr7.4:26035549-26035568 | MS.gene52582:CDS | 20.0% |
| !!! | GTTTTCATATAAGTTTTAAG+TGG | + | chr7.4:26036424-26036443 | None:intergenic | 20.0% |
| !!! | TCTTTTGTTTTAATTCAAGA+AGG | - | chr7.4:26033786-26033805 | MS.gene52582:CDS | 20.0% |
| !!! | TTATTTGATAACACTGATTT+TGG | - | chr7.4:26033994-26034013 | MS.gene52582:CDS | 20.0% |
| !!! | TTTTGATGATTGAAACTTAT+TGG | - | chr7.4:26036573-26036592 | MS.gene52582:CDS | 20.0% |
| ! | AAACAGTATCAGTATTTCAA+AGG | + | chr7.4:26035747-26035766 | None:intergenic | 25.0% |
| ! | AAATGTTTGAAAAACGTGTT+GGG | + | chr7.4:26036294-26036313 | None:intergenic | 25.0% |
| ! | AACAGTATCAGTATTTCAAA+GGG | + | chr7.4:26035746-26035765 | None:intergenic | 25.0% |
| ! | ATGTGTGAATAAAAAGCTAA+AGG | + | chr7.4:26034362-26034381 | None:intergenic | 25.0% |
| ! | CACACAAAAAAAAAATTACC+TGG | + | chr7.4:26036076-26036095 | None:intergenic | 25.0% |
| ! | CTATTAATGTGTCTTACTTT+CGG | - | chr7.4:26033760-26033779 | MS.gene52582:CDS | 25.0% |
| ! | TATTAATGTGTCTTACTTTC+GGG | - | chr7.4:26033761-26033780 | MS.gene52582:CDS | 25.0% |
| ! | TTTGTTGCTCCTAAAATTAT+TGG | - | chr7.4:26035608-26035627 | MS.gene52582:intron | 25.0% |
| !! | AGTTATCCCAACATATTTTA+AGG | + | chr7.4:26035559-26035578 | None:intergenic | 25.0% |
| !! | GAATAAAAAGCTAAAGGTTT+TGG | + | chr7.4:26034356-26034375 | None:intergenic | 25.0% |
| !! | GGATCTGAATGAATTTTAAA+AGG | + | chr7.4:26034828-26034847 | None:intergenic | 25.0% |
| !! | TAGCTTTTTATTCACACATA+TGG | - | chr7.4:26034363-26034382 | MS.gene52582:CDS | 25.0% |
| !! | TTCTTTCCACCAATAATTTT+AGG | + | chr7.4:26035620-26035639 | None:intergenic | 25.0% |
| !!! | AATGAAGTTCCATTTGTTAT+TGG | - | chr7.4:26035197-26035216 | MS.gene52582:intron | 25.0% |
| !!! | ACAAAAAGTTTGATTTTGCT+TGG | + | chr7.4:26034237-26034256 | None:intergenic | 25.0% |
| !!! | ATGAATTTTAAAAGGAAGGA+AGG | + | chr7.4:26034820-26034839 | None:intergenic | 25.0% |
| !!! | CAAACTTTTTGTTGTTGAAA+AGG | - | chr7.4:26034245-26034264 | MS.gene52582:intron | 25.0% |
| !!! | CTGAATGAATTTTAAAAGGA+AGG | + | chr7.4:26034824-26034843 | None:intergenic | 25.0% |
| !!! | TTATCTTTTTCATTTTCCGT+AGG | - | chr7.4:26035165-26035184 | MS.gene52582:intron | 25.0% |
| AAAACACTGCCAATAACAAA+TGG | + | chr7.4:26035209-26035228 | None:intergenic | 30.0% | |
| AAACATTTCTCAAACTCTTG+GGG | - | chr7.4:26036306-26036325 | MS.gene52582:CDS | 30.0% | |
| AAAGCCTCAATAAGTTAGAT+CGG | - | chr7.4:26036529-26036548 | MS.gene52582:CDS | 30.0% | |
| AATATGATGCTGGATTCATA+TGG | + | chr7.4:26035939-26035958 | None:intergenic | 30.0% | |
| ACAACACAATAATACTGCAA+AGG | + | chr7.4:26036115-26036134 | None:intergenic | 30.0% | |
| AGTTTGACATATTAAATCCG+CGG | - | chr7.4:26035033-26035052 | MS.gene52582:CDS | 30.0% | |
| ATGTGTTCTGTTTAATTGAC+AGG | - | chr7.4:26034390-26034409 | MS.gene52582:CDS | 30.0% | |
| ATTCAAATGCCTGATGAAAA+TGG | - | chr7.4:26036014-26036033 | MS.gene52582:intron | 30.0% | |
| CAAACATTTCTCAAACTCTT+GGG | - | chr7.4:26036305-26036324 | MS.gene52582:CDS | 30.0% | |
| CACTAGTAGTAAGATTATAG+AGG | - | chr7.4:26033707-26033726 | MS.gene52582:intron | 30.0% | |
| CTTATTTGAGCTTATCTGTT+CGG | - | chr7.4:26036343-26036362 | MS.gene52582:CDS | 30.0% | |
| CTTCATTTCAATTTCTCCTA+CGG | + | chr7.4:26035184-26035203 | None:intergenic | 30.0% | |
| GAAATGTTTGAAAAACGTGT+TGG | + | chr7.4:26036295-26036314 | None:intergenic | 30.0% | |
| TAGATTAAGGGCTATTACAT+AGG | - | chr7.4:26035489-26035508 | MS.gene52582:intron | 30.0% | |
| TATCAGTTCTTTATGTACTG+TGG | - | chr7.4:26034321-26034340 | MS.gene52582:CDS | 30.0% | |
| TCAAACATTTCTCAAACTCT+TGG | - | chr7.4:26036304-26036323 | MS.gene52582:CDS | 30.0% | |
| TTATTTAAGCATACCTCACA+GGG | - | chr7.4:26034195-26034214 | MS.gene52582:intron | 30.0% | |
| TTATTTGAGCTTATCTGTTC+GGG | - | chr7.4:26036344-26036363 | MS.gene52582:CDS | 30.0% | |
| TTCTAACTAATTTACTGCTG+CGG | - | chr7.4:26035275-26035294 | MS.gene52582:CDS | 30.0% | |
| ! | AATACTTCAATGATAACGCT+TGG | - | chr7.4:26036487-26036506 | MS.gene52582:intron | 30.0% |
| ! | ATTTTCATCAGGCATTTGAA+TGG | + | chr7.4:26036015-26036034 | None:intergenic | 30.0% |
| ! | GCTTTTGCTACTATTATTGA+AGG | - | chr7.4:26034271-26034290 | MS.gene52582:intron | 30.0% |
| ! | GTGGTTTTCATATACTATCT+AGG | + | chr7.4:26036405-26036424 | None:intergenic | 30.0% |
| ! | TTTTCATCAGGCATTTGAAT+GGG | + | chr7.4:26036014-26036033 | None:intergenic | 30.0% |
| !! | ATGGAGTATTTTTATGATCG+AGG | - | chr7.4:26035062-26035081 | MS.gene52582:CDS | 30.0% |
| !! | TGGAGTATTTTTATGATCGA+GGG | - | chr7.4:26035063-26035082 | MS.gene52582:CDS | 30.0% |
| !! | TTCCTCTAAAATGTTGCAAA+GGG | + | chr7.4:26033629-26033648 | None:intergenic | 30.0% |
| !! | TTTCCTCTAAAATGTTGCAA+AGG | + | chr7.4:26033630-26033649 | None:intergenic | 30.0% |
| !!! | TTGATAACACTGATTTTGGT+TGG | - | chr7.4:26033998-26034017 | MS.gene52582:CDS | 30.0% |
| AAATTTGACAATGCACCATG+AGG | + | chr7.4:26035981-26036000 | None:intergenic | 35.0% | |
| AACCTCCCTTCAATTTCAAA+GGG | + | chr7.4:26034100-26034119 | None:intergenic | 35.0% | |
| AGAACCGATCTAACTTATTG+AGG | + | chr7.4:26036536-26036555 | None:intergenic | 35.0% | |
| AGCATACTTGAGAACAGAAA+AGG | + | chr7.4:26034479-26034498 | None:intergenic | 35.0% | |
| ATCATCAAAACACTCAGCAA+AGG | + | chr7.4:26036563-26036582 | None:intergenic | 35.0% | |
| ATTCATATGGAGAGACAGTA+GGG | + | chr7.4:26035926-26035945 | None:intergenic | 35.0% | |
| ATTGAGATCAGAGTTTCTTG+AGG | - | chr7.4:26036804-26036823 | MS.gene52582:CDS | 35.0% | |
| CAGTGTGTGAAACTAAACTA+GGG | - | chr7.4:26033570-26033589 | MS.gene52582:intron | 35.0% | |
| CTATTACATAGGCAACAACA+GGG | - | chr7.4:26035500-26035519 | MS.gene52582:intron | 35.0% | |
| CTCGAAATTGCATAAACTGT+TGG | - | chr7.4:26034573-26034592 | MS.gene52582:intron | 35.0% | |
| CTGTGATATTTATGTCTGTC+AGG | - | chr7.4:26035577-26035596 | MS.gene52582:CDS | 35.0% | |
| CTTTATGTACTGTGGTTAGT+GGG | - | chr7.4:26034329-26034348 | MS.gene52582:CDS | 35.0% | |
| GAAGAAGCTCTACAAATCAA+AGG | + | chr7.4:26034448-26034467 | None:intergenic | 35.0% | |
| GAATAGGAAGGTCAATACAA+AGG | - | chr7.4:26036247-26036266 | MS.gene52582:intron | 35.0% | |
| GCATACTTGAGAACAGAAAA+GGG | + | chr7.4:26034478-26034497 | None:intergenic | 35.0% | |
| GTACCACACAGTAATAATCT+TGG | + | chr7.4:26035441-26035460 | None:intergenic | 35.0% | |
| GTTATTTAAGCATACCTCAC+AGG | - | chr7.4:26034194-26034213 | MS.gene52582:intron | 35.0% | |
| GTTGCTCCTAAAATTATTGG+TGG | - | chr7.4:26035611-26035630 | MS.gene52582:intron | 35.0% | |
| GTTTGACATATTAAATCCGC+GGG | - | chr7.4:26035034-26035053 | MS.gene52582:CDS | 35.0% | |
| TACAAGGTGTAGTCAAATAG+TGG | + | chr7.4:26033925-26033944 | None:intergenic | 35.0% | |
| TACCATAGTTGTAACACAGA+GGG | - | chr7.4:26034956-26034975 | MS.gene52582:CDS | 35.0% | |
| TACTACTGCAAAGGATTGTT+TGG | - | chr7.4:26036185-26036204 | MS.gene52582:intron | 35.0% | |
| TATAAAACATGGGATCCTCA+TGG | - | chr7.4:26035963-26035982 | MS.gene52582:intron | 35.0% | |
| TCAAATAGTGGCTATAGCAA+TGG | + | chr7.4:26033913-26033932 | None:intergenic | 35.0% | |
| TCATCAAAACACTCAGCAAA+GGG | + | chr7.4:26036562-26036581 | None:intergenic | 35.0% | |
| TCTTTATGTACTGTGGTTAG+TGG | - | chr7.4:26034328-26034347 | MS.gene52582:CDS | 35.0% | |
| TGAATCAATCACTGTAATGC+AGG | - | chr7.4:26035809-26035828 | MS.gene52582:intron | 35.0% | |
| TGAGACATTACAATGCGTAT+CGG | + | chr7.4:26034885-26034904 | None:intergenic | 35.0% | |
| TTCTTGTCTCATTACCTTCT+TGG | - | chr7.4:26034603-26034622 | MS.gene52582:intron | 35.0% | |
| ! | ACATTTTACCCTCATTTGTC+GGG | + | chr7.4:26034142-26034161 | None:intergenic | 35.0% |
| ! | ATTGTGAAGACACTTTTCTG+CGG | - | chr7.4:26035252-26035271 | MS.gene52582:intron | 35.0% |
| ! | CACATTTTACCCTCATTTGT+CGG | + | chr7.4:26034143-26034162 | None:intergenic | 35.0% |
| ! | CTAGTTTAGTTTCACACACT+GGG | + | chr7.4:26033571-26033590 | None:intergenic | 35.0% |
| ! | TTTTTCCTGTTACACCAAGA+AGG | + | chr7.4:26034620-26034639 | None:intergenic | 35.0% |
| !! | AGGGTATCTTTCAGTTTTCT+GGG | - | chr7.4:26035082-26035101 | MS.gene52582:CDS | 35.0% |
| !! | CAACTCCCTTTGAAATTGAA+GGG | - | chr7.4:26034092-26034111 | MS.gene52582:CDS | 35.0% |
| !! | GGTTGATTCGTTTCTAACTA+TGG | - | chr7.4:26034019-26034038 | MS.gene52582:CDS | 35.0% |
| !! | TCAACTCCCTTTGAAATTGA+AGG | - | chr7.4:26034091-26034110 | MS.gene52582:CDS | 35.0% |
| AAAATGGCGAAAACGTGACT+TGG | - | chr7.4:26036030-26036049 | MS.gene52582:intron | 40.0% | |
| AAATACTCCATAACATCCCG+CGG | + | chr7.4:26035053-26035072 | None:intergenic | 40.0% | |
| AACAAGGCAAACCTGAAGTA+GGG | + | chr7.4:26033495-26033514 | None:intergenic | 40.0% | |
| AAGAAGCTGCTAGAATAGGA+AGG | - | chr7.4:26036235-26036254 | MS.gene52582:intron | 40.0% | |
| AAGTATGCTATGACTCTCGA+TGG | - | chr7.4:26034490-26034509 | MS.gene52582:intron | 40.0% | |
| AATCCACTAACAAGCATGTC+TGG | + | chr7.4:26035840-26035859 | None:intergenic | 40.0% | |
| ACCATAGTTGTAACACAGAG+GGG | - | chr7.4:26034957-26034976 | MS.gene52582:CDS | 40.0% | |
| ACTGAAAACTCGTGCAAGAA+AGG | + | chr7.4:26034546-26034565 | None:intergenic | 40.0% | |
| ACTTATTGGACCTGCAGATA+AGG | - | chr7.4:26036587-26036606 | MS.gene52582:CDS | 40.0% | |
| AGAAGCGATGCAATCATTGT+GGG | - | chr7.4:26034714-26034733 | MS.gene52582:intron | 40.0% | |
| AGCAGCATAGAACTCAAATG+CGG | + | chr7.4:26036679-26036698 | None:intergenic | 40.0% | |
| AGTGGATGATACTACTGCAA+AGG | - | chr7.4:26036176-26036195 | MS.gene52582:intron | 40.0% | |
| ATAAAAGTTTCCGCTGGTGA+TGG | + | chr7.4:26035897-26035916 | None:intergenic | 40.0% | |
| ATCGTCTCACCTCAAATCAA+CGG | - | chr7.4:26035415-26035434 | MS.gene52582:intron | 40.0% | |
| ATCTTCATGTTGTCCCAATC+AGG | + | chr7.4:26036613-26036632 | None:intergenic | 40.0% | |
| ATTAAATCCGCGGGATGTTA+TGG | - | chr7.4:26035043-26035062 | MS.gene52582:CDS | 40.0% | |
| CAACCTCCCTTCAATTTCAA+AGG | + | chr7.4:26034101-26034120 | None:intergenic | 40.0% | |
| CCAGTGTGTGAAACTAAACT+AGG | - | chr7.4:26033569-26033588 | MS.gene52582:intron | 40.0% | |
| CTACCATAGTTGTAACACAG+AGG | - | chr7.4:26034955-26034974 | MS.gene52582:CDS | 40.0% | |
| CTCGGTCAGTGATATAGATT+GGG | + | chr7.4:26035359-26035378 | None:intergenic | 40.0% | |
| GAAGATCGATGTCATGTACT+CGG | - | chr7.4:26036627-26036646 | MS.gene52582:CDS | 40.0% | |
| GATTCATATGGAGAGACAGT+AGG | + | chr7.4:26035927-26035946 | None:intergenic | 40.0% | |
| GCTATTACATAGGCAACAAC+AGG | - | chr7.4:26035499-26035518 | MS.gene52582:intron | 40.0% | |
| GGAGAAGGCTTGAATTATCT+CGG | - | chr7.4:26036766-26036785 | MS.gene52582:CDS | 40.0% | |
| GTGTGAAACTAAACTAGGGT+GGG | - | chr7.4:26033574-26033593 | MS.gene52582:intron | 40.0% | |
| TAGAAGCGATGCAATCATTG+TGG | - | chr7.4:26034713-26034732 | MS.gene52582:intron | 40.0% | |
| TCAATCACTGTAATGCAGGT+TGG | - | chr7.4:26035813-26035832 | MS.gene52582:intron | 40.0% | |
| TCAGCAATAAAAGTTTCCGC+TGG | + | chr7.4:26035903-26035922 | None:intergenic | 40.0% | |
| TCTCGGTCAGTGATATAGAT+TGG | + | chr7.4:26035360-26035379 | None:intergenic | 40.0% | |
| TCTTCAACCGTTACCAGATA+CGG | - | chr7.4:26035860-26035879 | MS.gene52582:intron | 40.0% | |
| TGCTTTGCATTTGCAGATGA+TGG | + | chr7.4:26033192-26033211 | None:intergenic | 40.0% | |
| TGTACTTTGTGTGAGCAACA+AGG | + | chr7.4:26033511-26033530 | None:intergenic | 40.0% | |
| TGTGAAACTAAACTAGGGTG+GGG | - | chr7.4:26033575-26033594 | MS.gene52582:intron | 40.0% | |
| TGTGTGAAACTAAACTAGGG+TGG | - | chr7.4:26033573-26033592 | MS.gene52582:intron | 40.0% | |
| ! | CACCCTTTGCAACATTTTAG+AGG | - | chr7.4:26033624-26033643 | MS.gene52582:intron | 40.0% |
| ! | CATTACCTTCTTGGTGTAAC+AGG | - | chr7.4:26034612-26034631 | MS.gene52582:intron | 40.0% |
| ! | CCTAGTTTAGTTTCACACAC+TGG | + | chr7.4:26033572-26033591 | None:intergenic | 40.0% |
| ! | GCAATTTTCCCGACAAATGA+GGG | - | chr7.4:26034131-26034150 | MS.gene52582:CDS | 40.0% |
| ! | GGATGAGAATGAGAAAGTGT+TGG | + | chr7.4:26033171-26033190 | None:intergenic | 40.0% |
| ! | TACTTTTACTGCAGGAAGTC+CGG | - | chr7.4:26035458-26035477 | MS.gene52582:intron | 40.0% |
| ! | TGCAATTTTCCCGACAAATG+AGG | - | chr7.4:26034130-26034149 | MS.gene52582:CDS | 40.0% |
| ! | TTCGTCTGGAGTAATTCACA+AGG | - | chr7.4:26035136-26035155 | MS.gene52582:CDS | 40.0% |
| ! | TTCTCCCCATGATCTCTTTT+GGG | - | chr7.4:26036729-26036748 | MS.gene52582:CDS | 40.0% |
| !! | AATCGATGTTTGCTATCAGC+AGG | - | chr7.4:26035697-26035716 | MS.gene52582:intron | 40.0% |
| !! | AATGAGAAAGTGTTGGCGAT+TGG | + | chr7.4:26033164-26033183 | None:intergenic | 40.0% |
| !! | ACGTTTTCGCCATTTTCATC+AGG | + | chr7.4:26036026-26036045 | None:intergenic | 40.0% |
| !! | ATTTACTGCTGCGGATTAGA+TGG | - | chr7.4:26035284-26035303 | MS.gene52582:CDS | 40.0% |
| !! | CTTTCAGTTTTCTGGGAATG+TGG | - | chr7.4:26035089-26035108 | MS.gene52582:CDS | 40.0% |
| !! | GGATTGCAAGTTGATCTTCT+TGG | - | chr7.4:26033675-26033694 | MS.gene52582:intron | 40.0% |
| !! | TAATCTTGGCCGTTGATTTG+AGG | + | chr7.4:26035427-26035446 | None:intergenic | 40.0% |
| !! | TCAAAGGAGCGTTAACAAGA+AGG | + | chr7.4:26034432-26034451 | None:intergenic | 40.0% |
| !!! | GAGGGTATCTTTCAGTTTTC+TGG | - | chr7.4:26035081-26035100 | MS.gene52582:CDS | 40.0% |
| AAACCTATGGGACATGTCTG+AGG | - | chr7.4:26034929-26034948 | MS.gene52582:CDS | 45.0% | |
| AAACCTCAGACATGTCCCAT+AGG | + | chr7.4:26034935-26034954 | None:intergenic | 45.0% | |
| AAACTAGGGTGGGGTCAAAA+GGG | - | chr7.4:26033584-26033603 | MS.gene52582:intron | 45.0% | |
| AAAGAATGCACCATCTCCTG+TGG | - | chr7.4:26035634-26035653 | MS.gene52582:intron | 45.0% | |
| AAGAATGCACCATCTCCTGT+GGG | - | chr7.4:26035635-26035654 | MS.gene52582:intron | 45.0% | |
| AATGCTAGTAAGTCCCGTGA+GGG | - | chr7.4:26034044-26034063 | MS.gene52582:CDS | 45.0% | |
| ACCCCTCTGTGTTACAACTA+TGG | + | chr7.4:26034961-26034980 | None:intergenic | 45.0% | |
| ACTTCTCCTCATCCCAACTT+CGG | - | chr7.4:26033293-26033312 | MS.gene52582:CDS | 45.0% | |
| CAACAACAGGGTCACATAGT+TGG | - | chr7.4:26035512-26035531 | MS.gene52582:CDS | 45.0% | |
| CAACAAGGCAAACCTGAAGT+AGG | + | chr7.4:26033496-26033515 | None:intergenic | 45.0% | |
| CCAGAAGAAGCTGCTAGAAT+AGG | - | chr7.4:26036231-26036250 | MS.gene52582:intron | 45.0% | |
| CCTATTCTAGCAGCTTCTTC+TGG | + | chr7.4:26036234-26036253 | None:intergenic | 45.0% | |
| CGGCCAAGATTATTACTGTG+TGG | - | chr7.4:26035435-26035454 | MS.gene52582:intron | 45.0% | |
| CTCATTCTGATTGACCCTCA+CGG | + | chr7.4:26034061-26034080 | None:intergenic | 45.0% | |
| GCAGCATAGAACTCAAATGC+GGG | + | chr7.4:26036678-26036697 | None:intergenic | 45.0% | |
| GGAAAAATTGCTGCTAGCAC+TGG | - | chr7.4:26034633-26034652 | MS.gene52582:intron | 45.0% | |
| GGGAGGAAATACAGTTCGAA+GGG | - | chr7.4:26034734-26034753 | MS.gene52582:intron | 45.0% | |
| GGGGTCAAAAGGGTTGTTAT+TGG | - | chr7.4:26033594-26033613 | MS.gene52582:intron | 45.0% | |
| GTGTACTGTACAGTGACTTG+TGG | - | chr7.4:26033820-26033839 | MS.gene52582:CDS | 45.0% | |
| TAAACTAGGGTGGGGTCAAA+AGG | - | chr7.4:26033583-26033602 | MS.gene52582:intron | 45.0% | |
| TAATGCTAGTAAGTCCCGTG+AGG | - | chr7.4:26034043-26034062 | MS.gene52582:CDS | 45.0% | |
| TAGCTCGCAGCTCAAAAACT+AGG | + | chr7.4:26034695-26034714 | None:intergenic | 45.0% | |
| TCAAACTCTTGGGGTCTGTT+TGG | - | chr7.4:26036315-26036334 | MS.gene52582:CDS | 45.0% | |
| TCAGGCATTTGAATGGGATG+AGG | + | chr7.4:26036008-26036027 | None:intergenic | 45.0% | |
| TCATTCTGATTGACCCTCAC+GGG | + | chr7.4:26034060-26034079 | None:intergenic | 45.0% | |
| TCCTCCCCAAAAGAGATCAT+GGG | + | chr7.4:26036737-26036756 | None:intergenic | 45.0% | |
| TGGGAGGAAATACAGTTCGA+AGG | - | chr7.4:26034733-26034752 | MS.gene52582:intron | 45.0% | |
| TGGGCGATCGAGATATGTAA+AGG | + | chr7.4:26035340-26035359 | None:intergenic | 45.0% | |
| TTCCATGTTCAGGTAAGCAG+TGG | + | chr7.4:26033435-26033454 | None:intergenic | 45.0% | |
| ! | ACTTTTACTGCAGGAAGTCC+GGG | - | chr7.4:26035459-26035478 | MS.gene52582:intron | 45.0% |
| ! | CCCTTAATCTAAAGCAGACC+CGG | + | chr7.4:26035480-26035499 | None:intergenic | 45.0% |
| ! | CCGGGTCTGCTTTAGATTAA+GGG | - | chr7.4:26035477-26035496 | MS.gene52582:intron | 45.0% |
| ! | CTGTGTGGTACTTTTACTGC+AGG | - | chr7.4:26035450-26035469 | MS.gene52582:intron | 45.0% |
| ! | CTTCTCCCCATGATCTCTTT+TGG | - | chr7.4:26036728-26036747 | MS.gene52582:CDS | 45.0% |
| ! | TCCGGGTCTGCTTTAGATTA+AGG | - | chr7.4:26035476-26035495 | MS.gene52582:intron | 45.0% |
| ! | TCTCCCCATGATCTCTTTTG+GGG | - | chr7.4:26036730-26036749 | MS.gene52582:CDS | 45.0% |
| !! | AAACGTGACTTGGTTGAGTG+TGG | - | chr7.4:26036040-26036059 | MS.gene52582:intron | 45.0% |
| !! | CTCCCTTTGAAATTGAAGGG+AGG | - | chr7.4:26034095-26034114 | MS.gene52582:CDS | 45.0% |
| !! | GCAAGTTGATCTTCTTGGAG+AGG | - | chr7.4:26033680-26033699 | MS.gene52582:intron | 45.0% |
| !! | TCAGTTTTCTGGGAATGTGG+AGG | - | chr7.4:26035092-26035111 | MS.gene52582:CDS | 45.0% |
| !! | TCTATGCTGCTTTCAACTGC+CGG | - | chr7.4:26036688-26036707 | MS.gene52582:CDS | 45.0% |
| ACCGACAATTCCATCACCAG+CGG | - | chr7.4:26035884-26035903 | MS.gene52582:intron | 50.0% | |
| ACCTGCAGATAAGGCCTGAT+TGG | - | chr7.4:26036596-26036615 | MS.gene52582:CDS | 50.0% | |
| AGATTGACAGCCAGACATGG+AGG | - | chr7.4:26034849-26034868 | MS.gene52582:intron | 50.0% | |
| AGCCACTGCTTACCTGAACA+TGG | - | chr7.4:26033430-26033449 | MS.gene52582:intron | 50.0% | |
| AGCCTCAACTAGAACCGAAC+CGG | + | chr7.4:26036710-26036729 | None:intergenic | 50.0% | |
| AGCGATGCAATCATTGTGGG+AGG | - | chr7.4:26034717-26034736 | MS.gene52582:intron | 50.0% | |
| AGTCACCAGGTTCCATGTTC+AGG | + | chr7.4:26033445-26033464 | None:intergenic | 50.0% | |
| AGTTGCACTCATACCCTGTG+AGG | + | chr7.4:26034211-26034230 | None:intergenic | 50.0% | |
| ATGAGGAGAAGTGAAACCGG+CGG | + | chr7.4:26033285-26033304 | None:intergenic | 50.0% | |
| ATGGAACCTGGTGACTGTGA+CGG | - | chr7.4:26033449-26033468 | MS.gene52582:intron | 50.0% | |
| CAGAAGCTGCTTGCGTCTAA+AGG | - | chr7.4:26034996-26035015 | MS.gene52582:CDS | 50.0% | |
| CATATGTCCACCTCCATGTC+TGG | + | chr7.4:26034862-26034881 | None:intergenic | 50.0% | |
| CATCTCCTGTGGGTGATCTT+GGG | - | chr7.4:26035645-26035664 | MS.gene52582:intron | 50.0% | |
| CCAAGATTGACAGCCAGACA+TGG | - | chr7.4:26034846-26034865 | MS.gene52582:intron | 50.0% | |
| CCATGTCTGGCTGTCAATCT+TGG | + | chr7.4:26034849-26034868 | None:intergenic | 50.0% | |
| CCTCCCCAAAAGAGATCATG+GGG | + | chr7.4:26036736-26036755 | None:intergenic | 50.0% | |
| CCTGCAGATAAGGCCTGATT+GGG | - | chr7.4:26036597-26036616 | MS.gene52582:CDS | 50.0% | |
| CGTGAGGGTCAATCAGAATG+AGG | - | chr7.4:26034059-26034078 | MS.gene52582:CDS | 50.0% | |
| CTCCTCCCCAAAAGAGATCA+TGG | + | chr7.4:26036738-26036757 | None:intergenic | 50.0% | |
| CTGGGAATGTGGAGGAACAT+TGG | - | chr7.4:26035100-26035119 | MS.gene52582:CDS | 50.0% | |
| CTTTAGACGCAAGCAGCTTC+TGG | + | chr7.4:26034998-26035017 | None:intergenic | 50.0% | |
| GAAATTGAAGGGAGGTTGCC+AGG | - | chr7.4:26034103-26034122 | MS.gene52582:CDS | 50.0% | |
| GCTATGACTCTCGATGGTGA+GGG | - | chr7.4:26034496-26034515 | MS.gene52582:intron | 50.0% | |
| GCTTACCTGAACATGGAACC+TGG | - | chr7.4:26033437-26033456 | MS.gene52582:intron | 50.0% | |
| GGAAGTAACGGCCTGAACTT+CGG | + | chr7.4:26033390-26033409 | None:intergenic | 50.0% | |
| GGGATGAGGAGAAGTGAAAC+CGG | + | chr7.4:26033288-26033307 | None:intergenic | 50.0% | |
| GTGCGTGCACTTAGAAGTCA+AGG | - | chr7.4:26033654-26033673 | MS.gene52582:intron | 50.0% | |
| GTGTTGGGTCATACCAGATC+AGG | + | chr7.4:26036279-26036298 | None:intergenic | 50.0% | |
| TCCAGAGGAGGCAAACCTAT+GGG | - | chr7.4:26034917-26034936 | MS.gene52582:CDS | 50.0% | |
| TCGGGAAAATTGCACCAACC+TGG | + | chr7.4:26034124-26034143 | None:intergenic | 50.0% | |
| TGCAGCTTATCCACCATGCA+TGG | + | chr7.4:26034659-26034678 | None:intergenic | 50.0% | |
| TGCTATGACTCTCGATGGTG+AGG | - | chr7.4:26034495-26034514 | MS.gene52582:intron | 50.0% | |
| TTCCAGAGGAGGCAAACCTA+TGG | - | chr7.4:26034916-26034935 | MS.gene52582:CDS | 50.0% | |
| ! | GAGTGTGGAGCATTACTACC+AGG | - | chr7.4:26036055-26036074 | MS.gene52582:intron | 50.0% |
| ! | GGTCCAGACATGCTTGTTAG+TGG | - | chr7.4:26035834-26035853 | MS.gene52582:intron | 50.0% |
| ! | TTGTAACACAGAGGGGTGCA+AGG | - | chr7.4:26034964-26034983 | MS.gene52582:CDS | 50.0% |
| !! | CATGATCTCTTTTGGGGAGG+AGG | - | chr7.4:26036736-26036755 | MS.gene52582:CDS | 50.0% |
| !! | TCCGCTGGTGATGGAATTGT+CGG | + | chr7.4:26035888-26035907 | None:intergenic | 50.0% |
| ACAAAGGCAGCGTCCTGATC+TGG | - | chr7.4:26036263-26036282 | MS.gene52582:intron | 55.0% | |
| ACCATCCCAAGATCACCCAC+AGG | + | chr7.4:26035653-26035672 | None:intergenic | 55.0% | |
| CCAAGATCACCCACAGGAGA+TGG | + | chr7.4:26035647-26035666 | None:intergenic | 55.0% | |
| CCATCTCCTGTGGGTGATCT+TGG | - | chr7.4:26035644-26035663 | MS.gene52582:intron | 55.0% | |
| CGCGTAGAGGTAACCTTCAC+CGG | + | chr7.4:26033351-26033370 | None:intergenic | 55.0% | |
| CTCATCGCTGACAAATCCGC+CGG | - | chr7.4:26033266-26033285 | MS.gene52582:CDS | 55.0% | |
| GAAGGTTACCTCTACGCGCA+AGG | - | chr7.4:26033353-26033372 | MS.gene52582:CDS | 55.0% | |
| GGATTTGTCAGCGATGAGGG+CGG | + | chr7.4:26033264-26033283 | None:intergenic | 55.0% | |
| TAACGGCCTGAACTTCGGCA+GGG | + | chr7.4:26033385-26033404 | None:intergenic | 55.0% | |
| TCAGGTAAGCAGTGGCTCCA+CGG | + | chr7.4:26033427-26033446 | None:intergenic | 55.0% | |
| TCAGTCCCTCGATCTTCCAG+AGG | - | chr7.4:26034902-26034921 | MS.gene52582:CDS | 55.0% | |
| TCCAACGAACTTGTGCGCCT+AGG | + | chr7.4:26036157-26036176 | None:intergenic | 55.0% | |
| TCCCATAGGTTTGCCTCCTC+TGG | + | chr7.4:26034921-26034940 | None:intergenic | 55.0% | |
| TCCTGTGGGTGATCTTGGGA+TGG | - | chr7.4:26035649-26035668 | MS.gene52582:intron | 55.0% | |
| TGCTGTGTCTGCCCTACTTC+AGG | - | chr7.4:26033481-26033500 | MS.gene52582:intron | 55.0% | |
| TTGAAGGGAGGTTGCCAGGT+TGG | - | chr7.4:26034107-26034126 | MS.gene52582:CDS | 55.0% | |
| TTGACAGCCAGACATGGAGG+TGG | - | chr7.4:26034852-26034871 | MS.gene52582:intron | 55.0% | |
| TTGTCACCGTCACAGTCACC+AGG | + | chr7.4:26033458-26033477 | None:intergenic | 55.0% | |
| ! | CCCAATCAGGCCTTATCTGC+AGG | + | chr7.4:26036600-26036619 | None:intergenic | 55.0% |
| ! | GCTGCTTTCAACTGCCGGTT+CGG | - | chr7.4:26036693-26036712 | MS.gene52582:CDS | 55.0% |
| ! | GGCGGATTTGTCAGCGATGA+GGG | + | chr7.4:26033267-26033286 | None:intergenic | 55.0% |
| ! | TGCCTCCTCTGGAAGATCGA+GGG | + | chr7.4:26034910-26034929 | None:intergenic | 55.0% |
| ! | TTGCCTCCTCTGGAAGATCG+AGG | + | chr7.4:26034911-26034930 | None:intergenic | 55.0% |
| !! | CCCCATGATCTCTTTTGGGG+AGG | - | chr7.4:26036733-26036752 | MS.gene52582:CDS | 55.0% |
| !! | GCTGCGTCTGCTATTTCGTC+TGG | - | chr7.4:26035122-26035141 | MS.gene52582:CDS | 55.0% |
| !! | GGAATTGTCGGTGCCGTATC+TGG | + | chr7.4:26035876-26035895 | None:intergenic | 55.0% |
| !! | GTCGGTGCCGTATCTGGTAA+CGG | + | chr7.4:26035870-26035889 | None:intergenic | 55.0% |
| !! | TGCCGGTTCGGTTCTAGTTG+AGG | - | chr7.4:26036705-26036724 | MS.gene52582:CDS | 55.0% |
| !! | TTTTGGGGAGGAGGTCGAGA+AGG | - | chr7.4:26036745-26036764 | MS.gene52582:CDS | 55.0% |
| AACGGCCTGAACTTCGGCAG+GGG | + | chr7.4:26033384-26033403 | None:intergenic | 60.0% | |
| ACGCAGCCGAAGTTGGGATG+AGG | + | chr7.4:26033302-26033321 | None:intergenic | 60.0% | |
| GCCTAGGCGCACAAGTTCGT+TGG | - | chr7.4:26036153-26036172 | MS.gene52582:intron | 60.0% | |
| GCGATGACGCAGCCGAAGTT+GGG | + | chr7.4:26033308-26033327 | None:intergenic | 60.0% | |
| GGAGGAGGTCGAGAAGGAGA+AGG | - | chr7.4:26036751-26036770 | MS.gene52582:CDS | 60.0% | |
| GGCGCACAAGTTCGTTGGAG+TGG | - | chr7.4:26036158-26036177 | MS.gene52582:intron | 60.0% | |
| GTAACGGCCTGAACTTCGGC+AGG | + | chr7.4:26033386-26033405 | None:intergenic | 60.0% | |
| GTCCCTCGATCTTCCAGAGG+AGG | - | chr7.4:26034905-26034924 | MS.gene52582:CDS | 60.0% | |
| GTTCAGGCCGTTACTTCCGC+CGG | - | chr7.4:26033392-26033411 | MS.gene52582:CDS | 60.0% | |
| TACCTCCCCTGCCGAAGTTC+AGG | - | chr7.4:26033376-26033395 | MS.gene52582:CDS | 60.0% | |
| ! | CGGCGGATTTGTCAGCGATG+AGG | + | chr7.4:26033268-26033287 | None:intergenic | 60.0% |
| !! | CTAGCACTGGCCATGCATGG+TGG | - | chr7.4:26034646-26034665 | MS.gene52582:intron | 60.0% |
| !! | CTGCTAGCACTGGCCATGCA+TGG | - | chr7.4:26034643-26034662 | MS.gene52582:intron | 60.0% |
| ACCTTCACCGGCGACATCGC+CGG | + | chr7.4:26033339-26033358 | None:intergenic | 65.0% | |
| ACGCTCGCCGGCGGAAGTAA+CGG | + | chr7.4:26033402-26033421 | None:intergenic | 65.0% | |
| GGCGATGACGCAGCCGAAGT+TGG | + | chr7.4:26033309-26033328 | None:intergenic | 65.0% | |
| !! | GGGAGGTACCTTGCGCGTAG+AGG | + | chr7.4:26033364-26033383 | None:intergenic | 65.0% |
| ACAACCACGCGCTCGACGCC+GGG | - | chr7.4:26033225-26033244 | MS.gene52582:CDS | 70.0% | |
| CACAACCACGCGCTCGACGC+CGG | - | chr7.4:26033224-26033243 | MS.gene52582:CDS | 70.0% | |
| GGCCTGAACTTCGGCAGGGG+AGG | + | chr7.4:26033381-26033400 | None:intergenic | 70.0% | |
| GGCGGCGCGTCGGATATACC+CGG | + | chr7.4:26033246-26033265 | None:intergenic | 70.0% | |
| TCACCGGCGACATCGCCGGA+GGG | + | chr7.4:26033335-26033354 | None:intergenic | 70.0% | |
| TCCGGCGATGTCGCCGGTGA+AGG | - | chr7.4:26033335-26033354 | MS.gene52582:CDS | 70.0% | |
| TGCGTCATCGCCACCCCCTC+CGG | - | chr7.4:26033317-26033336 | MS.gene52582:CDS | 70.0% | |
| TTCACCGGCGACATCGCCGG+AGG | + | chr7.4:26033336-26033355 | None:intergenic | 70.0% | |
| ! | TATACCCGGCGTCGAGCGCG+TGG | + | chr7.4:26033232-26033251 | None:intergenic | 70.0% |
| ACCCCCTCCGGCGATGTCGC+CGG | - | chr7.4:26033329-26033348 | MS.gene52582:CDS | 75.0% | |
| ACCGGCGACATCGCCGGAGG+GGG | + | chr7.4:26033333-26033352 | None:intergenic | 75.0% | |
| CACCGGCGACATCGCCGGAG+GGG | + | chr7.4:26033334-26033353 | None:intergenic | 75.0% | |
| CAGCGATGAGGGCGGCGCGT+CGG | + | chr7.4:26033256-26033275 | None:intergenic | 75.0% | |
| GGCTCCACGGCAACGCTCGC+CGG | + | chr7.4:26033414-26033433 | None:intergenic | 75.0% | |
| TCCACGGCAACGCTCGCCGG+CGG | + | chr7.4:26033411-26033430 | None:intergenic | 75.0% | |
| ! | GGCGACATCGCCGGAGGGGG+TGG | + | chr7.4:26033330-26033349 | None:intergenic | 80.0% |
| !! | TCCGCCGGCGAGCGTTGCCG+TGG | - | chr7.4:26033407-26033426 | MS.gene52582:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 26033146 | 26036870 | 26033146 | ID=MS.gene52582 |
| chr7.4 | mRNA | 26033146 | 26036870 | 26033146 | ID=MS.gene52582.t1;Parent=MS.gene52582 |
| chr7.4 | exon | 26036514 | 26036870 | 26036514 | ID=MS.gene52582.t1.exon1;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26036514 | 26036870 | 26036514 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26036288 | 26036425 | 26036288 | ID=MS.gene52582.t1.exon2;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26036288 | 26036425 | 26036288 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26035505 | 26035604 | 26035505 | ID=MS.gene52582.t1.exon3;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26035505 | 26035604 | 26035505 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26035257 | 26035382 | 26035257 | ID=MS.gene52582.t1.exon4;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26035257 | 26035382 | 26035257 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26034859 | 26035172 | 26034859 | ID=MS.gene52582.t1.exon5;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26034859 | 26035172 | 26034859 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26034298 | 26034417 | 26034298 | ID=MS.gene52582.t1.exon6;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26034298 | 26034417 | 26034298 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26033940 | 26034185 | 26033940 | ID=MS.gene52582.t1.exon7;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26033940 | 26034185 | 26033940 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26033732 | 26033857 | 26033732 | ID=MS.gene52582.t1.exon8;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26033732 | 26033857 | 26033732 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| chr7.4 | exon | 26033146 | 26033412 | 26033146 | ID=MS.gene52582.t1.exon9;Parent=MS.gene52582.t1 |
| chr7.4 | CDS | 26033146 | 26033412 | 26033146 | ID=cds.MS.gene52582.t1;Parent=MS.gene52582.t1 |
| Gene Sequence |
| Protein sequence |
