Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54659.t1 | XP_013450845.1 | 95.3 | 361 | 16 | 1 | 1 | 360 | 1 | 361 | 6.00E-177 | 630.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54659.t1 | Q94JU2 | 46.4 | 366 | 178 | 8 | 1 | 350 | 1 | 364 | 3.5e-77 | 290.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54659.t1 | A0A072UGJ8 | 95.3 | 361 | 16 | 1 | 1 | 360 | 1 | 361 | 4.3e-177 | 630.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04933 | MS.gene54659 | 0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene049993 | MS.gene54659 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene050787 | MS.gene54659 | 0.824343 | 8.50E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene54659 | 0.842653 | 2.27E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene54659 | 0.830636 | 2.63E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene54659 | -0.877152 | 7.90E-69 | -1.69E-46 |
| MS.gene052135 | MS.gene54659 | 0.801451 | 8.95E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene54659 | 0.84559 | 3.69E-59 | -1.69E-46 |
| MS.gene052982 | MS.gene54659 | 0.810401 | 1.17E-50 | -1.69E-46 |
| MS.gene053176 | MS.gene54659 | 0.820868 | 5.46E-53 | -1.69E-46 |
| MS.gene053330 | MS.gene54659 | 0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene54659 | 0.875794 | 2.33E-68 | -1.69E-46 |
| MS.gene054473 | MS.gene54659 | 0.810173 | 1.31E-50 | -1.69E-46 |
| MS.gene054548 | MS.gene54659 | 0.813506 | 2.47E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene54659 | 0.802201 | 6.28E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene54659 | 0.844559 | 7.01E-59 | -1.69E-46 |
| MS.gene054920 | MS.gene54659 | 0.827476 | 1.53E-54 | -1.69E-46 |
| MS.gene055217 | MS.gene54659 | 0.836953 | 6.92E-57 | -1.69E-46 |
| MS.gene055356 | MS.gene54659 | 0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene54659 | 0.839811 | 1.27E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene54659 | 0.837873 | 4.02E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene54659 | 0.820072 | 8.32E-53 | -1.69E-46 |
| MS.gene05594 | MS.gene54659 | 0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene056297 | MS.gene54659 | 0.804075 | 2.57E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene54659 | 0.820975 | 5.16E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene54659 | 0.807163 | 5.78E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene54659 | 0.810087 | 1.37E-50 | -1.69E-46 |
| MS.gene057825 | MS.gene54659 | 0.817965 | 2.51E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene54659 | 0.800277 | 1.55E-48 | -1.69E-46 |
| MS.gene058142 | MS.gene54659 | 0.850941 | 1.23E-60 | -1.69E-46 |
| MS.gene058710 | MS.gene54659 | 0.81167 | 6.23E-51 | -1.69E-46 |
| MS.gene058739 | MS.gene54659 | 0.811023 | 8.61E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene54659 | 0.852805 | 3.63E-61 | -1.69E-46 |
| MS.gene058935 | MS.gene54659 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene54659 | 0.812782 | 3.56E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene54659 | 0.848239 | 6.96E-60 | -1.69E-46 |
| MS.gene05984 | MS.gene54659 | 0.803524 | 3.35E-49 | -1.69E-46 |
| MS.gene060038 | MS.gene54659 | 0.804151 | 2.48E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene54659 | 0.804821 | 1.80E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene54659 | -0.836603 | 8.50E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54659.t1 | MTR_6g007747 | 95.291 | 361 | 16 | 1 | 1 | 360 | 1 | 361 | 0.0 | 655 |
| MS.gene54659.t1 | MTR_6g007743 | 77.778 | 360 | 77 | 2 | 1 | 357 | 1 | 360 | 0.0 | 557 |
| MS.gene54659.t1 | MTR_6g007757 | 79.726 | 365 | 69 | 3 | 1 | 360 | 1 | 365 | 0.0 | 545 |
| MS.gene54659.t1 | MTR_6g007750 | 77.322 | 366 | 77 | 3 | 1 | 360 | 1 | 366 | 0.0 | 541 |
| MS.gene54659.t1 | MTR_6g007740 | 78.177 | 362 | 76 | 2 | 1 | 359 | 1 | 362 | 0.0 | 540 |
| MS.gene54659.t1 | MTR_6g007753 | 76.687 | 326 | 71 | 2 | 40 | 360 | 322 | 647 | 6.43e-172 | 493 |
| MS.gene54659.t1 | MTR_6g007753 | 65.651 | 361 | 85 | 3 | 1 | 360 | 1 | 323 | 6.87e-152 | 442 |
| MS.gene54659.t1 | MTR_6g007757 | 81.250 | 256 | 44 | 2 | 1 | 252 | 1 | 256 | 1.40e-143 | 407 |
| MS.gene54659.t1 | MTR_0103s0090 | 54.223 | 367 | 158 | 5 | 1 | 360 | 1 | 364 | 9.08e-134 | 386 |
| MS.gene54659.t1 | MTR_6g007760 | 55.806 | 310 | 130 | 4 | 1 | 304 | 1 | 309 | 3.41e-115 | 337 |
| MS.gene54659.t1 | MTR_0103s0090 | 56.000 | 275 | 114 | 3 | 91 | 360 | 1 | 273 | 4.87e-104 | 307 |
| MS.gene54659.t1 | MTR_1g014510 | 42.857 | 350 | 187 | 5 | 8 | 345 | 7 | 355 | 3.76e-88 | 273 |
| MS.gene54659.t1 | MTR_4g106720 | 41.547 | 349 | 193 | 7 | 7 | 346 | 6 | 352 | 4.84e-81 | 251 |
| MS.gene54659.t1 | MTR_3g090550 | 43.478 | 345 | 182 | 7 | 12 | 350 | 6 | 343 | 8.92e-81 | 250 |
| MS.gene54659.t1 | MTR_5g034980 | 44.304 | 316 | 168 | 4 | 17 | 325 | 12 | 326 | 4.22e-79 | 246 |
| MS.gene54659.t1 | MTR_5g034990 | 41.228 | 342 | 193 | 6 | 10 | 346 | 12 | 350 | 3.61e-73 | 231 |
| MS.gene54659.t1 | MTR_5g034910 | 40.237 | 338 | 185 | 5 | 17 | 346 | 12 | 340 | 6.11e-71 | 225 |
| MS.gene54659.t1 | MTR_5g034930 | 39.883 | 341 | 197 | 4 | 16 | 350 | 10 | 348 | 5.05e-69 | 220 |
| MS.gene54659.t1 | MTR_5g034970 | 40.317 | 315 | 169 | 4 | 17 | 325 | 12 | 313 | 2.57e-61 | 200 |
| MS.gene54659.t1 | MTR_3g095460 | 33.533 | 334 | 213 | 4 | 13 | 337 | 6 | 339 | 9.75e-52 | 175 |
| MS.gene54659.t1 | MTR_3g072560 | 36.688 | 308 | 188 | 6 | 37 | 339 | 43 | 348 | 1.76e-51 | 176 |
| MS.gene54659.t1 | MTR_5g034980 | 42.798 | 243 | 131 | 4 | 17 | 252 | 12 | 253 | 7.32e-51 | 172 |
| MS.gene54659.t1 | MTR_0096s0100 | 30.892 | 314 | 209 | 6 | 37 | 344 | 43 | 354 | 1.07e-47 | 165 |
| MS.gene54659.t1 | MTR_3g072530 | 33.010 | 309 | 198 | 6 | 38 | 338 | 40 | 347 | 4.90e-45 | 158 |
| MS.gene54659.t1 | MTR_8g041390 | 30.380 | 316 | 203 | 6 | 32 | 333 | 33 | 345 | 6.22e-45 | 159 |
| MS.gene54659.t1 | MTR_1g074160 | 33.123 | 317 | 197 | 10 | 32 | 336 | 33 | 346 | 8.31e-45 | 157 |
| MS.gene54659.t1 | MTR_2g007990 | 33.333 | 309 | 197 | 6 | 30 | 329 | 33 | 341 | 1.13e-44 | 158 |
| MS.gene54659.t1 | MTR_1g030400 | 34.069 | 317 | 187 | 7 | 32 | 329 | 27 | 340 | 1.90e-44 | 157 |
| MS.gene54659.t1 | MTR_1g074120 | 30.702 | 342 | 229 | 7 | 8 | 343 | 12 | 351 | 2.80e-44 | 156 |
| MS.gene54659.t1 | MTR_1g030600 | 32.550 | 298 | 192 | 5 | 37 | 325 | 43 | 340 | 3.64e-44 | 157 |
| MS.gene54659.t1 | MTR_1g074020 | 34.459 | 296 | 185 | 7 | 37 | 325 | 38 | 331 | 3.67e-44 | 155 |
| MS.gene54659.t1 | MTR_2g027030 | 35.430 | 302 | 187 | 5 | 31 | 324 | 31 | 332 | 3.69e-44 | 156 |
| MS.gene54659.t1 | MTR_3g012420 | 32.890 | 301 | 194 | 6 | 38 | 330 | 43 | 343 | 6.74e-44 | 156 |
| MS.gene54659.t1 | MTR_1g068630 | 34.000 | 300 | 193 | 5 | 30 | 324 | 33 | 332 | 1.10e-43 | 155 |
| MS.gene54659.t1 | MTR_4g094362 | 31.378 | 341 | 220 | 7 | 13 | 339 | 15 | 355 | 1.99e-43 | 154 |
| MS.gene54659.t1 | MTR_4g094340 | 33.524 | 349 | 209 | 9 | 13 | 344 | 10 | 352 | 2.07e-43 | 154 |
| MS.gene54659.t1 | MTR_7g111830 | 31.437 | 334 | 212 | 7 | 12 | 328 | 7 | 340 | 2.82e-43 | 154 |
| MS.gene54659.t1 | MTR_4g094340 | 33.524 | 349 | 209 | 9 | 13 | 344 | 28 | 370 | 3.28e-43 | 154 |
| MS.gene54659.t1 | MTR_2g007970 | 35.065 | 308 | 190 | 6 | 30 | 328 | 30 | 336 | 1.78e-42 | 152 |
| MS.gene54659.t1 | MTR_4g094360 | 30.939 | 362 | 235 | 8 | 13 | 360 | 15 | 375 | 1.79e-42 | 152 |
| MS.gene54659.t1 | MTR_3g072500 | 31.546 | 317 | 195 | 6 | 37 | 337 | 45 | 355 | 4.74e-42 | 151 |
| MS.gene54659.t1 | MTR_6g081840 | 32.686 | 309 | 192 | 5 | 61 | 360 | 60 | 361 | 5.89e-42 | 150 |
| MS.gene54659.t1 | MTR_3g095450 | 29.855 | 345 | 218 | 7 | 25 | 357 | 20 | 352 | 9.62e-42 | 149 |
| MS.gene54659.t1 | MTR_8g092650 | 31.065 | 338 | 219 | 5 | 13 | 337 | 6 | 342 | 1.52e-41 | 149 |
| MS.gene54659.t1 | MTR_4g129650 | 32.597 | 362 | 225 | 9 | 11 | 355 | 7 | 366 | 3.21e-41 | 148 |
| MS.gene54659.t1 | MTR_1g051120 | 31.014 | 345 | 223 | 10 | 8 | 340 | 12 | 353 | 6.63e-41 | 147 |
| MS.gene54659.t1 | MTR_1g030580 | 31.707 | 328 | 208 | 8 | 37 | 353 | 41 | 363 | 1.92e-40 | 147 |
| MS.gene54659.t1 | MTR_2g016710 | 27.855 | 359 | 249 | 6 | 10 | 360 | 6 | 362 | 2.63e-40 | 145 |
| MS.gene54659.t1 | MTR_1g038560 | 31.269 | 323 | 207 | 9 | 13 | 325 | 4 | 321 | 6.83e-40 | 144 |
| MS.gene54659.t1 | MTR_3g095420 | 27.500 | 360 | 239 | 6 | 13 | 360 | 8 | 357 | 7.61e-40 | 144 |
| MS.gene54659.t1 | MTR_1g073990 | 33.028 | 327 | 207 | 8 | 8 | 325 | 12 | 335 | 1.75e-39 | 143 |
| MS.gene54659.t1 | MTR_2g102340 | 33.436 | 326 | 194 | 11 | 30 | 339 | 30 | 348 | 1.76e-39 | 144 |
| MS.gene54659.t1 | MTR_1g074070 | 29.674 | 337 | 227 | 8 | 8 | 337 | 12 | 345 | 2.94e-39 | 143 |
| MS.gene54659.t1 | MTR_1g070175 | 28.852 | 357 | 241 | 8 | 5 | 354 | 9 | 359 | 2.94e-39 | 143 |
| MS.gene54659.t1 | MTR_8g006010 | 32.110 | 327 | 208 | 5 | 11 | 327 | 9 | 331 | 4.68e-39 | 143 |
| MS.gene54659.t1 | MTR_7g100050 | 32.343 | 303 | 196 | 7 | 30 | 324 | 31 | 332 | 6.15e-39 | 142 |
| MS.gene54659.t1 | MTR_6g036450 | 33.228 | 316 | 198 | 6 | 25 | 329 | 31 | 344 | 6.28e-39 | 142 |
| MS.gene54659.t1 | MTR_2g065550 | 30.854 | 363 | 233 | 9 | 6 | 354 | 3 | 361 | 6.87e-39 | 142 |
| MS.gene54659.t1 | MTR_4g094342 | 30.499 | 341 | 226 | 6 | 13 | 342 | 14 | 354 | 9.82e-39 | 142 |
| MS.gene54659.t1 | MTR_1g114210 | 31.683 | 303 | 196 | 6 | 30 | 324 | 29 | 328 | 1.41e-38 | 140 |
| MS.gene54659.t1 | MTR_3g072500 | 33.333 | 258 | 152 | 4 | 94 | 337 | 1 | 252 | 4.71e-38 | 138 |
| MS.gene54659.t1 | MTR_2g007960 | 29.859 | 355 | 233 | 6 | 1 | 339 | 1 | 355 | 4.75e-38 | 140 |
| MS.gene54659.t1 | MTR_3g112480 | 30.671 | 313 | 198 | 5 | 32 | 325 | 40 | 352 | 4.22e-37 | 138 |
| MS.gene54659.t1 | MTR_1g023180 | 30.408 | 319 | 196 | 5 | 32 | 325 | 41 | 358 | 1.37e-36 | 137 |
| MS.gene54659.t1 | MTR_2g007260 | 31.304 | 345 | 219 | 7 | 30 | 359 | 32 | 373 | 1.02e-35 | 134 |
| MS.gene54659.t1 | MTR_4g094352 | 29.041 | 365 | 231 | 7 | 13 | 351 | 13 | 375 | 1.56e-35 | 134 |
| MS.gene54659.t1 | MTR_4g094340 | 33.099 | 284 | 168 | 7 | 79 | 344 | 7 | 286 | 1.68e-35 | 131 |
| MS.gene54659.t1 | MTR_4g094360 | 32.353 | 306 | 193 | 7 | 67 | 360 | 25 | 328 | 9.10e-35 | 130 |
| MS.gene54659.t1 | MTR_3g112480 | 30.714 | 280 | 176 | 4 | 64 | 325 | 18 | 297 | 1.12e-33 | 127 |
| MS.gene54659.t1 | MTR_5g025290 | 28.571 | 350 | 219 | 10 | 5 | 325 | 25 | 372 | 1.65e-32 | 126 |
| MS.gene54659.t1 | MTR_5g025290 | 28.177 | 362 | 228 | 11 | 20 | 352 | 11 | 369 | 2.86e-32 | 125 |
| MS.gene54659.t1 | MTR_8g006090 | 31.250 | 352 | 227 | 7 | 11 | 349 | 10 | 359 | 4.36e-32 | 124 |
| MS.gene54659.t1 | MTR_8g006120 | 31.250 | 336 | 215 | 7 | 11 | 337 | 9 | 337 | 8.64e-32 | 123 |
| MS.gene54659.t1 | MTR_3g095440 | 27.378 | 347 | 224 | 8 | 25 | 357 | 20 | 352 | 1.35e-31 | 122 |
| MS.gene54659.t1 | MTR_5g025400 | 29.446 | 343 | 198 | 10 | 20 | 325 | 11 | 346 | 3.08e-31 | 122 |
| MS.gene54659.t1 | MTR_5g025370 | 29.532 | 342 | 204 | 10 | 32 | 344 | 30 | 363 | 5.90e-31 | 121 |
| MS.gene54659.t1 | MTR_5g025340 | 30.631 | 333 | 195 | 9 | 25 | 325 | 15 | 343 | 1.06e-30 | 120 |
| MS.gene54659.t1 | MTR_2g016710 | 28.094 | 299 | 207 | 5 | 10 | 302 | 6 | 302 | 1.44e-30 | 119 |
| MS.gene54659.t1 | MTR_8g092650 | 29.583 | 240 | 159 | 2 | 109 | 338 | 26 | 265 | 1.49e-30 | 117 |
| MS.gene54659.t1 | MTR_5g021160 | 31.987 | 297 | 190 | 8 | 38 | 324 | 33 | 327 | 1.61e-30 | 119 |
| MS.gene54659.t1 | MTR_4g094360 | 30.100 | 299 | 200 | 6 | 13 | 302 | 15 | 313 | 2.07e-30 | 118 |
| MS.gene54659.t1 | MTR_3g072520 | 29.560 | 318 | 214 | 6 | 34 | 341 | 31 | 348 | 2.38e-30 | 119 |
| MS.gene54659.t1 | MTR_5g025330 | 29.841 | 315 | 199 | 8 | 32 | 325 | 29 | 342 | 2.51e-29 | 119 |
| MS.gene54659.t1 | MTR_4g129650 | 31.923 | 260 | 165 | 5 | 107 | 355 | 1 | 259 | 6.78e-29 | 113 |
| MS.gene54659.t1 | MTR_8g072350 | 27.879 | 330 | 208 | 9 | 25 | 325 | 14 | 342 | 1.32e-28 | 114 |
| MS.gene54659.t1 | MTR_5g089390 | 27.907 | 301 | 207 | 5 | 46 | 343 | 48 | 341 | 1.71e-28 | 114 |
| MS.gene54659.t1 | MTR_1g014790 | 46.281 | 121 | 57 | 3 | 88 | 201 | 41 | 160 | 7.28e-28 | 108 |
| MS.gene54659.t1 | MTR_5g068790 | 27.517 | 298 | 207 | 4 | 36 | 324 | 42 | 339 | 8.91e-28 | 112 |
| MS.gene54659.t1 | MTR_5g021160 | 34.310 | 239 | 147 | 6 | 94 | 324 | 8 | 244 | 1.37e-27 | 110 |
| MS.gene54659.t1 | MTR_8g006050 | 31.683 | 303 | 176 | 9 | 43 | 332 | 25 | 309 | 1.97e-27 | 111 |
| MS.gene54659.t1 | MTR_3g019050 | 29.073 | 313 | 210 | 6 | 46 | 346 | 52 | 364 | 3.05e-27 | 111 |
| MS.gene54659.t1 | MTR_1g052205 | 29.508 | 244 | 146 | 7 | 114 | 344 | 2 | 232 | 6.05e-27 | 107 |
| MS.gene54659.t1 | MTR_1g074160 | 32.599 | 227 | 142 | 9 | 32 | 250 | 33 | 256 | 6.13e-27 | 107 |
| MS.gene54659.t1 | MTR_5g012650 | 33.117 | 308 | 178 | 11 | 55 | 344 | 51 | 348 | 9.15e-27 | 109 |
| MS.gene54659.t1 | MTR_8g006090 | 31.727 | 249 | 162 | 5 | 109 | 349 | 31 | 279 | 1.35e-26 | 107 |
| MS.gene54659.t1 | MTR_5g069040 | 26.524 | 328 | 226 | 6 | 36 | 348 | 42 | 369 | 1.47e-26 | 109 |
| MS.gene54659.t1 | MTR_4g100840 | 29.907 | 321 | 202 | 11 | 38 | 344 | 40 | 351 | 5.22e-24 | 101 |
| MS.gene54659.t1 | MTR_3g095440 | 28.750 | 240 | 153 | 7 | 25 | 250 | 20 | 255 | 1.39e-22 | 95.9 |
| MS.gene54659.t1 | MTR_4g094340 | 31.518 | 257 | 156 | 7 | 13 | 255 | 10 | 260 | 2.10e-22 | 95.5 |
| MS.gene54659.t1 | MTR_4g094340 | 31.907 | 257 | 155 | 8 | 13 | 255 | 28 | 278 | 2.95e-22 | 95.5 |
| MS.gene54659.t1 | MTR_3g112480 | 28.444 | 225 | 144 | 3 | 118 | 325 | 1 | 225 | 8.29e-22 | 94.0 |
| MS.gene54659.t1 | MTR_8g006090 | 28.904 | 301 | 203 | 5 | 11 | 302 | 10 | 308 | 2.66e-21 | 93.2 |
| MS.gene54659.t1 | MTR_3g072500 | 29.130 | 230 | 143 | 5 | 37 | 252 | 45 | 268 | 3.06e-21 | 92.4 |
| MS.gene54659.t1 | MTR_3g072530 | 27.888 | 251 | 139 | 7 | 38 | 246 | 40 | 290 | 6.85e-20 | 89.4 |
| MS.gene54659.t1 | MTR_1g051120 | 30.097 | 206 | 134 | 7 | 8 | 205 | 12 | 215 | 6.98e-19 | 84.7 |
| MS.gene54659.t1 | MTR_5g021160 | 32.864 | 213 | 131 | 8 | 38 | 240 | 33 | 243 | 1.09e-18 | 85.1 |
| MS.gene54659.t1 | MTR_2g102340 | 30.303 | 231 | 143 | 8 | 30 | 248 | 56 | 280 | 4.56e-18 | 84.3 |
| MS.gene54659.t1 | MTR_4g094340 | 40.136 | 147 | 82 | 4 | 13 | 155 | 28 | 172 | 7.22e-18 | 82.0 |
| MS.gene54659.t1 | MTR_1g051120 | 31.646 | 158 | 101 | 6 | 8 | 160 | 12 | 167 | 8.97e-18 | 82.4 |
| MS.gene54659.t1 | MTR_3g072500 | 30.769 | 182 | 106 | 5 | 37 | 204 | 45 | 220 | 2.69e-16 | 77.4 |
| MS.gene54659.t1 | MTR_8g006090 | 29.242 | 277 | 182 | 6 | 11 | 278 | 10 | 281 | 2.36e-15 | 76.3 |
| MS.gene54659.t1 | MTR_4g094342 | 32.500 | 160 | 101 | 4 | 13 | 165 | 14 | 173 | 2.84e-15 | 75.1 |
| MS.gene54659.t1 | MTR_1g061900 | 65.957 | 47 | 16 | 0 | 136 | 182 | 46 | 92 | 1.33e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54659.t1 | AT3G28050 | 46.361 | 371 | 171 | 9 | 1 | 350 | 1 | 364 | 1.74e-103 | 309 |
| MS.gene54659.t1 | AT5G40240 | 43.056 | 360 | 182 | 7 | 5 | 350 | 11 | 361 | 2.49e-91 | 278 |
| MS.gene54659.t1 | AT5G40240 | 43.056 | 360 | 182 | 7 | 5 | 350 | 11 | 361 | 2.49e-91 | 278 |
| MS.gene54659.t1 | AT5G40240 | 43.056 | 360 | 182 | 7 | 5 | 350 | 25 | 375 | 4.49e-91 | 278 |
| MS.gene54659.t1 | AT5G40230 | 41.504 | 359 | 195 | 5 | 2 | 350 | 9 | 362 | 1.30e-86 | 266 |
| MS.gene54659.t1 | AT5G40210 | 43.425 | 327 | 163 | 6 | 29 | 349 | 29 | 339 | 1.60e-83 | 257 |
| MS.gene54659.t1 | AT4G15540 | 41.243 | 354 | 190 | 6 | 2 | 350 | 5 | 345 | 3.77e-72 | 228 |
| MS.gene54659.t1 | AT4G15540 | 41.243 | 354 | 190 | 6 | 2 | 350 | 5 | 345 | 3.77e-72 | 228 |
| MS.gene54659.t1 | AT3G28080 | 43.149 | 343 | 182 | 6 | 17 | 350 | 18 | 356 | 1.71e-71 | 227 |
| MS.gene54659.t1 | AT3G28100 | 41.840 | 337 | 183 | 6 | 17 | 344 | 18 | 350 | 8.20e-70 | 223 |
| MS.gene54659.t1 | AT3G28130 | 40.058 | 347 | 191 | 7 | 10 | 346 | 10 | 349 | 7.47e-67 | 215 |
| MS.gene54659.t1 | AT3G28080 | 41.935 | 341 | 181 | 6 | 17 | 350 | 18 | 348 | 2.30e-66 | 213 |
| MS.gene54659.t1 | AT3G28070 | 40.936 | 342 | 182 | 8 | 21 | 350 | 25 | 358 | 4.99e-66 | 213 |
| MS.gene54659.t1 | AT3G28080 | 43.284 | 268 | 141 | 5 | 90 | 350 | 4 | 267 | 4.90e-61 | 197 |
| MS.gene54659.t1 | AT3G28080 | 43.284 | 268 | 141 | 5 | 90 | 350 | 4 | 267 | 4.90e-61 | 197 |
| MS.gene54659.t1 | AT3G28080 | 43.284 | 268 | 141 | 5 | 90 | 350 | 4 | 267 | 4.90e-61 | 197 |
| MS.gene54659.t1 | AT3G28080 | 43.284 | 268 | 141 | 5 | 90 | 350 | 4 | 267 | 4.90e-61 | 197 |
| MS.gene54659.t1 | AT3G28070 | 42.066 | 271 | 139 | 7 | 90 | 350 | 4 | 266 | 4.60e-60 | 194 |
| MS.gene54659.t1 | AT3G28130 | 40.377 | 265 | 143 | 6 | 90 | 346 | 6 | 263 | 1.59e-54 | 180 |
| MS.gene54659.t1 | AT3G28130 | 40.377 | 265 | 143 | 6 | 90 | 346 | 6 | 263 | 1.59e-54 | 180 |
| MS.gene54659.t1 | AT1G21890 | 34.688 | 320 | 190 | 5 | 37 | 337 | 35 | 354 | 7.23e-54 | 182 |
| MS.gene54659.t1 | AT3G28070 | 41.156 | 294 | 157 | 6 | 21 | 302 | 25 | 314 | 3.08e-52 | 176 |
| MS.gene54659.t1 | AT4G08300 | 33.333 | 339 | 213 | 7 | 9 | 334 | 6 | 344 | 5.46e-50 | 172 |
| MS.gene54659.t1 | AT5G07050 | 34.884 | 301 | 182 | 5 | 38 | 324 | 43 | 343 | 2.63e-49 | 171 |
| MS.gene54659.t1 | AT1G70260 | 31.884 | 345 | 219 | 5 | 10 | 339 | 9 | 352 | 4.46e-48 | 167 |
| MS.gene54659.t1 | AT3G28100 | 43.033 | 244 | 130 | 4 | 17 | 251 | 18 | 261 | 7.44e-48 | 163 |
| MS.gene54659.t1 | AT1G44800 | 33.333 | 303 | 184 | 5 | 37 | 327 | 35 | 331 | 2.14e-47 | 165 |
| MS.gene54659.t1 | AT2G39510 | 32.831 | 332 | 214 | 6 | 13 | 336 | 8 | 338 | 5.75e-46 | 161 |
| MS.gene54659.t1 | AT3G30340 | 33.003 | 303 | 196 | 4 | 30 | 325 | 28 | 330 | 5.89e-45 | 158 |
| MS.gene54659.t1 | AT1G60050 | 30.685 | 365 | 229 | 6 | 1 | 344 | 4 | 365 | 6.84e-45 | 158 |
| MS.gene54659.t1 | AT1G11450 | 31.611 | 329 | 218 | 5 | 13 | 335 | 16 | 343 | 1.12e-44 | 157 |
| MS.gene54659.t1 | AT3G28130 | 40.400 | 250 | 140 | 4 | 10 | 250 | 10 | 259 | 7.39e-44 | 152 |
| MS.gene54659.t1 | AT4G08290 | 31.515 | 330 | 215 | 7 | 34 | 354 | 33 | 360 | 1.18e-43 | 155 |
| MS.gene54659.t1 | AT4G28040 | 36.513 | 304 | 178 | 7 | 32 | 329 | 27 | 321 | 1.89e-43 | 154 |
| MS.gene54659.t1 | AT4G28040 | 36.513 | 304 | 178 | 7 | 32 | 329 | 27 | 321 | 1.89e-43 | 154 |
| MS.gene54659.t1 | AT4G28040 | 36.513 | 304 | 178 | 7 | 32 | 329 | 27 | 321 | 1.89e-43 | 154 |
| MS.gene54659.t1 | AT4G28040 | 36.513 | 304 | 178 | 7 | 32 | 329 | 27 | 321 | 1.89e-43 | 154 |
| MS.gene54659.t1 | AT4G28040 | 36.513 | 304 | 178 | 7 | 32 | 329 | 27 | 321 | 1.89e-43 | 154 |
| MS.gene54659.t1 | AT1G21890 | 33.808 | 281 | 171 | 4 | 37 | 302 | 35 | 315 | 2.08e-43 | 154 |
| MS.gene54659.t1 | AT4G01430 | 29.577 | 355 | 239 | 6 | 13 | 357 | 9 | 362 | 2.11e-43 | 154 |
| MS.gene54659.t1 | AT2G37460 | 32.812 | 320 | 200 | 8 | 30 | 339 | 32 | 346 | 1.02e-42 | 152 |
| MS.gene54659.t1 | AT5G13670 | 30.678 | 339 | 215 | 9 | 13 | 335 | 8 | 342 | 1.09e-42 | 152 |
| MS.gene54659.t1 | AT1G11460 | 31.348 | 319 | 212 | 4 | 13 | 324 | 16 | 334 | 2.87e-42 | 150 |
| MS.gene54659.t1 | AT1G01070 | 30.960 | 323 | 213 | 5 | 11 | 324 | 14 | 335 | 4.07e-42 | 150 |
| MS.gene54659.t1 | AT1G11450 | 32.770 | 296 | 192 | 5 | 46 | 335 | 5 | 299 | 8.10e-42 | 148 |
| MS.gene54659.t1 | AT3G28080 | 37.607 | 234 | 135 | 5 | 124 | 350 | 1 | 230 | 1.14e-41 | 145 |
| MS.gene54659.t1 | AT1G11450 | 32.534 | 292 | 190 | 5 | 50 | 335 | 2 | 292 | 9.48e-41 | 145 |
| MS.gene54659.t1 | AT3G28070 | 36.709 | 237 | 132 | 7 | 124 | 350 | 1 | 229 | 1.65e-40 | 142 |
| MS.gene54659.t1 | AT3G28080 | 37.828 | 267 | 103 | 6 | 90 | 350 | 4 | 213 | 2.28e-39 | 139 |
| MS.gene54659.t1 | AT3G28100 | 46.701 | 197 | 97 | 3 | 14 | 202 | 15 | 211 | 4.80e-39 | 139 |
| MS.gene54659.t1 | AT5G64700 | 32.166 | 314 | 198 | 6 | 32 | 332 | 27 | 338 | 1.07e-38 | 141 |
| MS.gene54659.t1 | AT2G40900 | 30.448 | 335 | 208 | 9 | 37 | 353 | 35 | 362 | 5.86e-38 | 140 |
| MS.gene54659.t1 | AT1G75500 | 29.846 | 325 | 208 | 7 | 32 | 341 | 39 | 358 | 1.22e-37 | 139 |
| MS.gene54659.t1 | AT1G75500 | 29.846 | 325 | 208 | 7 | 32 | 341 | 39 | 358 | 1.22e-37 | 139 |
| MS.gene54659.t1 | AT3G18200 | 31.288 | 326 | 215 | 6 | 38 | 359 | 60 | 380 | 1.72e-37 | 139 |
| MS.gene54659.t1 | AT1G09380 | 29.193 | 322 | 218 | 5 | 10 | 321 | 5 | 326 | 4.51e-37 | 137 |
| MS.gene54659.t1 | AT1G01070 | 31.481 | 270 | 176 | 4 | 63 | 324 | 20 | 288 | 5.47e-37 | 136 |
| MS.gene54659.t1 | AT3G28130 | 35.498 | 231 | 134 | 6 | 124 | 346 | 1 | 224 | 5.92e-37 | 133 |
| MS.gene54659.t1 | AT3G56620 | 30.565 | 301 | 179 | 8 | 37 | 321 | 35 | 321 | 6.24e-37 | 137 |
| MS.gene54659.t1 | AT3G28130 | 43.781 | 201 | 105 | 3 | 10 | 202 | 10 | 210 | 2.74e-36 | 131 |
| MS.gene54659.t1 | AT3G28080 | 47.938 | 194 | 93 | 3 | 14 | 199 | 15 | 208 | 4.88e-36 | 133 |
| MS.gene54659.t1 | AT5G45370 | 30.488 | 328 | 209 | 11 | 32 | 351 | 39 | 355 | 2.38e-35 | 132 |
| MS.gene54659.t1 | AT1G11450 | 29.730 | 296 | 202 | 4 | 13 | 302 | 16 | 311 | 8.62e-35 | 130 |
| MS.gene54659.t1 | AT1G43650 | 31.847 | 314 | 205 | 6 | 30 | 337 | 24 | 334 | 1.45e-34 | 130 |
| MS.gene54659.t1 | AT4G30420 | 29.917 | 361 | 224 | 8 | 28 | 360 | 13 | 372 | 3.14e-34 | 130 |
| MS.gene54659.t1 | AT4G01440 | 29.333 | 300 | 205 | 6 | 36 | 328 | 32 | 331 | 3.33e-34 | 129 |
| MS.gene54659.t1 | AT4G01430 | 29.333 | 300 | 202 | 5 | 13 | 302 | 9 | 308 | 4.47e-34 | 128 |
| MS.gene54659.t1 | AT4G30420 | 29.917 | 361 | 224 | 8 | 28 | 360 | 23 | 382 | 5.09e-34 | 129 |
| MS.gene54659.t1 | AT1G11450 | 32.669 | 251 | 164 | 3 | 89 | 335 | 2 | 251 | 1.27e-33 | 125 |
| MS.gene54659.t1 | AT5G45370 | 28.613 | 346 | 216 | 10 | 32 | 351 | 39 | 379 | 4.70e-33 | 127 |
| MS.gene54659.t1 | AT5G45370 | 28.613 | 346 | 216 | 10 | 32 | 351 | 39 | 379 | 4.70e-33 | 127 |
| MS.gene54659.t1 | AT1G68170 | 30.383 | 339 | 215 | 6 | 1 | 324 | 1 | 333 | 1.08e-32 | 125 |
| MS.gene54659.t1 | AT1G25270 | 29.375 | 320 | 218 | 5 | 14 | 325 | 4 | 323 | 1.23e-32 | 125 |
| MS.gene54659.t1 | AT1G68170 | 32.039 | 309 | 189 | 6 | 31 | 324 | 21 | 323 | 2.79e-32 | 124 |
| MS.gene54659.t1 | AT3G53210 | 29.492 | 295 | 201 | 5 | 38 | 325 | 35 | 329 | 2.55e-31 | 122 |
| MS.gene54659.t1 | AT2G37450 | 31.132 | 318 | 176 | 9 | 37 | 337 | 33 | 324 | 1.25e-30 | 119 |
| MS.gene54659.t1 | AT5G47470 | 31.507 | 292 | 188 | 7 | 59 | 344 | 78 | 363 | 2.66e-28 | 113 |
| MS.gene54659.t1 | AT2G37450 | 33.591 | 259 | 148 | 8 | 96 | 337 | 1 | 252 | 3.29e-28 | 111 |
| MS.gene54659.t1 | AT5G47470 | 31.507 | 292 | 188 | 7 | 59 | 344 | 106 | 391 | 3.33e-28 | 114 |
| MS.gene54659.t1 | AT4G01440 | 29.344 | 259 | 176 | 6 | 36 | 287 | 32 | 290 | 3.86e-28 | 112 |
| MS.gene54659.t1 | AT3G18200 | 31.621 | 253 | 166 | 4 | 109 | 359 | 3 | 250 | 2.40e-27 | 108 |
| MS.gene54659.t1 | AT4G19185 | 27.619 | 315 | 206 | 8 | 32 | 325 | 40 | 353 | 3.64e-27 | 111 |
| MS.gene54659.t1 | AT4G08290 | 33.482 | 224 | 140 | 6 | 34 | 248 | 33 | 256 | 8.09e-27 | 107 |
| MS.gene54659.t1 | AT5G47470 | 31.159 | 276 | 179 | 6 | 59 | 328 | 106 | 376 | 9.98e-27 | 109 |
| MS.gene54659.t1 | AT3G53210 | 30.508 | 236 | 159 | 3 | 95 | 325 | 37 | 272 | 1.39e-26 | 108 |
| MS.gene54659.t1 | AT3G45870 | 28.483 | 323 | 211 | 7 | 15 | 319 | 14 | 334 | 4.03e-26 | 108 |
| MS.gene54659.t1 | AT3G30340 | 31.304 | 230 | 151 | 4 | 30 | 252 | 28 | 257 | 1.52e-24 | 101 |
| MS.gene54659.t1 | AT5G45370 | 27.305 | 282 | 176 | 8 | 94 | 351 | 1 | 277 | 3.37e-24 | 100 |
| MS.gene54659.t1 | AT5G45370 | 27.305 | 282 | 176 | 8 | 94 | 351 | 1 | 277 | 3.37e-24 | 100 |
| MS.gene54659.t1 | AT4G19185 | 26.953 | 256 | 167 | 6 | 89 | 325 | 21 | 275 | 4.54e-24 | 101 |
| MS.gene54659.t1 | AT5G64700 | 32.328 | 232 | 144 | 5 | 32 | 250 | 27 | 258 | 2.15e-23 | 98.2 |
| MS.gene54659.t1 | AT4G01430 | 28.319 | 226 | 155 | 3 | 138 | 357 | 1 | 225 | 5.45e-23 | 96.3 |
| MS.gene54659.t1 | AT4G01440 | 26.457 | 223 | 160 | 3 | 110 | 328 | 1 | 223 | 1.27e-22 | 95.9 |
| MS.gene54659.t1 | AT4G01440 | 26.457 | 223 | 160 | 3 | 110 | 328 | 1 | 223 | 1.27e-22 | 95.9 |
| MS.gene54659.t1 | AT4G01440 | 31.532 | 222 | 145 | 6 | 36 | 250 | 32 | 253 | 1.42e-22 | 96.3 |
| MS.gene54659.t1 | AT4G01450 | 25.758 | 330 | 239 | 5 | 13 | 338 | 10 | 337 | 4.36e-22 | 96.3 |
| MS.gene54659.t1 | AT4G01450 | 25.758 | 264 | 190 | 5 | 13 | 272 | 10 | 271 | 7.95e-21 | 92.4 |
| MS.gene54659.t1 | AT3G45870 | 27.213 | 305 | 204 | 7 | 15 | 302 | 14 | 317 | 3.70e-20 | 90.5 |
| MS.gene54659.t1 | AT1G43650 | 34.632 | 231 | 140 | 7 | 25 | 249 | 21 | 246 | 5.12e-20 | 89.0 |
| MS.gene54659.t1 | AT3G53210 | 31.694 | 183 | 118 | 5 | 38 | 213 | 35 | 217 | 8.01e-20 | 88.2 |
| MS.gene54659.t1 | AT4G16620 | 30.605 | 281 | 182 | 7 | 58 | 328 | 57 | 334 | 1.22e-19 | 89.4 |
| MS.gene54659.t1 | AT4G24980 | 28.671 | 286 | 152 | 8 | 43 | 325 | 3 | 239 | 3.21e-19 | 86.7 |
| MS.gene54659.t1 | AT3G28060 | 35.135 | 148 | 90 | 3 | 156 | 302 | 12 | 154 | 7.57e-19 | 82.8 |
| MS.gene54659.t1 | AT2G37450 | 30.303 | 198 | 109 | 6 | 154 | 337 | 103 | 285 | 1.14e-18 | 85.5 |
| MS.gene54659.t1 | AT4G01450 | 26.860 | 242 | 171 | 5 | 13 | 250 | 10 | 249 | 1.74e-17 | 81.6 |
| MS.gene54659.t1 | AT4G16620 | 30.000 | 240 | 158 | 5 | 96 | 328 | 1 | 237 | 5.72e-17 | 80.1 |
| MS.gene54659.t1 | AT4G16620 | 30.000 | 240 | 158 | 5 | 96 | 328 | 1 | 237 | 5.72e-17 | 80.1 |
| MS.gene54659.t1 | AT4G01450 | 32.895 | 152 | 99 | 3 | 13 | 161 | 10 | 161 | 2.21e-15 | 75.5 |
| MS.gene54659.t1 | AT3G28070 | 46.281 | 121 | 61 | 2 | 5 | 123 | 11 | 129 | 7.22e-15 | 73.6 |
| MS.gene54659.t1 | AT5G45370 | 25.523 | 239 | 150 | 7 | 136 | 351 | 86 | 319 | 1.12e-14 | 74.3 |
| MS.gene54659.t1 | AT3G45870 | 36.806 | 144 | 88 | 3 | 15 | 155 | 14 | 157 | 2.93e-14 | 72.8 |
| MS.gene54659.t1 | AT3G45870 | 24.201 | 219 | 148 | 5 | 117 | 319 | 43 | 259 | 6.85e-11 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATGTTCAGCTCAGATTT+TGG | 0.167569 | 6.1:+3438476 | MS.gene54659:intron |
| AATGCAAGTGCTTGGAAAAT+AGG | 0.247518 | 6.1:+3439991 | MS.gene54659:CDS |
| TTGGTCTTTATGCTGTATTA+TGG | 0.259309 | 6.1:+3440593 | MS.gene54659:CDS |
| TAGAGATGAGTGAGAGATTT+AGG | 0.263106 | 6.1:-3440014 | None:intergenic |
| AGTAGTAATGCTAAGGTAAT+AGG | 0.269594 | 6.1:+3438824 | MS.gene54659:CDS |
| CTTGGTGATATTCTTCATAT+TGG | 0.270149 | 6.1:+3440260 | MS.gene54659:CDS |
| ATTGCCTATGCTTATGCTAT+TGG | 0.291027 | 6.1:+3437753 | MS.gene54659:CDS |
| ATATTGAAAAGTGTGCTTCT+TGG | 0.313105 | 6.1:+3438179 | MS.gene54659:CDS |
| AAGACTAAAGTTACTTCATC+TGG | 0.315019 | 6.1:-3439910 | None:intergenic |
| AGCCAACAGAAATAACAATT+TGG | 0.327837 | 6.1:-3440223 | None:intergenic |
| TGGTCTTTATGCTGTATTAT+GGG | 0.328682 | 6.1:+3440594 | MS.gene54659:CDS |
| TGGCAGGAAATCCATGTAAA+AGG | 0.332324 | 6.1:-3437637 | None:intergenic |
| TGCTTCAGCAATTGGTAATC+TGG | 0.334590 | 6.1:+3438533 | MS.gene54659:CDS |
| CCAACACTTGCTTCAGCAAT+TGG | 0.341035 | 6.1:+3438525 | MS.gene54659:CDS |
| AGTGTGCTTCTTGGAGCAAT+AGG | 0.353294 | 6.1:+3438188 | MS.gene54659:CDS |
| GTTCTATAACTTTGCAAAAG+AGG | 0.357834 | 6.1:-3440682 | None:intergenic |
| CTGCCAATTGTAGTGATCAT+AGG | 0.366069 | 6.1:+3437654 | MS.gene54659:CDS |
| CTCCAAATTGTTATTTCTGT+TGG | 0.376296 | 6.1:+3440221 | MS.gene54659:CDS |
| ATTGTTATTTCTGTTGGCTT+AGG | 0.378336 | 6.1:+3440227 | MS.gene54659:CDS |
| GGCTTAGGAGTTATATTCCT+TGG | 0.379735 | 6.1:+3440242 | MS.gene54659:CDS |
| TTCAAAGCAGCCACACTTCA+AGG | 0.420349 | 6.1:+3437711 | MS.gene54659:CDS |
| GTGGATTCAAGTTGGGCCAT+TGG | 0.424561 | 6.1:+3438950 | MS.gene54659:CDS |
| AATATTATGGAGAAACTTAG+TGG | 0.426341 | 6.1:-3438161 | None:intergenic |
| TGATATGATGGTAGCAGTTA+TGG | 0.428349 | 6.1:-3439941 | None:intergenic |
| CAGTTCCAAATGCAAGTGCT+TGG | 0.453359 | 6.1:+3439983 | MS.gene54659:CDS |
| AGGACAGGAAACTATTGAAA+TGG | 0.462574 | 6.1:+3437674 | MS.gene54659:CDS |
| CATGGCAGTGGATTCAAGTT+GGG | 0.468094 | 6.1:+3438943 | MS.gene54659:CDS |
| GAAAAGATAGAGGAAGATGT+TGG | 0.478936 | 6.1:+3440628 | MS.gene54659:CDS |
| TCATGGCAGTGGATTCAAGT+TGG | 0.479967 | 6.1:+3438942 | MS.gene54659:CDS |
| TGTCCTATGATCACTACAAT+TGG | 0.481544 | 6.1:-3437657 | None:intergenic |
| GTGTGCTTCTTGGAGCAATA+GGG | 0.485757 | 6.1:+3438189 | MS.gene54659:CDS |
| GGAGCCACAATAATCACAAT+TGG | 0.486194 | 6.1:+3440574 | MS.gene54659:CDS |
| AGCTACAATTGTTGATATGA+TGG | 0.490173 | 6.1:-3439953 | None:intergenic |
| GTGATATTCTTCATATTGGA+AGG | 0.496039 | 6.1:+3440264 | MS.gene54659:CDS |
| CAAAGCAACAGAAAAGATAG+AGG | 0.513986 | 6.1:+3440618 | MS.gene54659:CDS |
| CCAATTGCTGAAGCAAGTGT+TGG | 0.519221 | 6.1:-3438525 | None:intergenic |
| GCATGGTCATTGAACATGAA+GGG | 0.523936 | 6.1:+3440170 | MS.gene54659:CDS |
| AGTCGGCTTTGTCATGGCAG+TGG | 0.529674 | 6.1:+3438931 | MS.gene54659:CDS |
| CTATGATCACTACAATTGGC+AGG | 0.536209 | 6.1:-3437653 | None:intergenic |
| GATTCAAGTTGGGCCATTGG+TGG | 0.543513 | 6.1:+3438953 | MS.gene54659:CDS |
| AATTTGGAGTGGCTTGAATG+AGG | 0.545289 | 6.1:-3440207 | None:intergenic |
| AAGACCAATTGTGATTATTG+TGG | 0.545851 | 6.1:-3440578 | None:intergenic |
| TCTTTACTTCATCAACCAGT+CGG | 0.549163 | 6.1:+3438914 | MS.gene54659:CDS |
| TCAACCAGTCGGCTTTGTCA+TGG | 0.554001 | 6.1:+3438925 | MS.gene54659:CDS |
| AATTGTAGTGATCATAGGAC+AGG | 0.554011 | 6.1:+3437659 | MS.gene54659:CDS |
| GGTCTTTATGCTGTATTATG+GGG | 0.556844 | 6.1:+3440595 | MS.gene54659:CDS |
| TAGGAAATATGACAAGAAGA+TGG | 0.568520 | 6.1:+3437613 | None:intergenic |
| TCTCTATAGATGATGACTCT+AGG | 0.570253 | 6.1:-3440654 | None:intergenic |
| GGAAGCATAATATCGATAGC+AGG | 0.572698 | 6.1:+3438845 | MS.gene54659:CDS |
| AGACTAAAGTTACTTCATCT+GGG | 0.574935 | 6.1:-3439909 | None:intergenic |
| TCAAAGCAGCCACACTTCAA+GGG | 0.585251 | 6.1:+3437712 | MS.gene54659:CDS |
| AAGTAGAAGTAGTAATGCTA+AGG | 0.588785 | 6.1:+3438817 | MS.gene54659:CDS |
| TGCATGGTCATTGAACATGA+AGG | 0.595200 | 6.1:+3440169 | MS.gene54659:CDS |
| ACTGCCATGACAAAGCCGAC+TGG | 0.596833 | 6.1:-3438929 | None:intergenic |
| GCTAGAATGAAAGTGAAAGC+AGG | 0.596873 | 6.1:-3438558 | None:intergenic |
| CATGGTCATTGAACATGAAG+GGG | 0.602521 | 6.1:+3440171 | MS.gene54659:CDS |
| TCAGCAGTACCGCTATTGCA+TGG | 0.607406 | 6.1:+3440153 | MS.gene54659:CDS |
| TGTTAGCAGAATGCCACCAA+TGG | 0.614355 | 6.1:-3438966 | None:intergenic |
| TTTGTGATGACTTTCTACAA+AGG | 0.624165 | 6.1:+3438872 | MS.gene54659:CDS |
| GTTGTTCATCCCTTGAAGTG+TGG | 0.626287 | 6.1:-3437721 | None:intergenic |
| AGTACCAATAGCATAAGCAT+AGG | 0.629753 | 6.1:-3437757 | None:intergenic |
| AAAGACGAATTCATGATCGA+TGG | 0.641827 | 6.1:-3438896 | None:intergenic |
| GTTCAATGACCATGCAATAG+CGG | 0.642378 | 6.1:-3440162 | None:intergenic |
| ACAGAAATAACAATTTGGAG+TGG | 0.648085 | 6.1:-3440218 | None:intergenic |
| AAGCATAGGCAATAAAGACA+TGG | 0.665582 | 6.1:-3437743 | None:intergenic |
| ATTATGGAGAAACTTAGTGG+TGG | 0.666472 | 6.1:-3438158 | None:intergenic |
| CAATATGAAGAATATCACCA+AGG | 0.717298 | 6.1:-3440259 | None:intergenic |
| ATGGTCATTGAACATGAAGG+GGG | 0.755717 | 6.1:+3440172 | MS.gene54659:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATAGAATCTTTAA+TGG | + | chr6.1:3439206-3439225 | MS.gene54659:intron | 10.0% |
| !!! | ATTTTGACAAAAATTATTTT+TGG | + | chr6.1:3437952-3437971 | MS.gene54659:intron | 10.0% |
| !!! | AAAAAGTATACACAAATTAA+AGG | - | chr6.1:3440534-3440553 | None:intergenic | 15.0% |
| !!! | AACTTCATAAATTTTTAACT+CGG | - | chr6.1:3438694-3438713 | None:intergenic | 15.0% |
| !!! | ACAAAAATTATTTTTGGAAA+CGG | + | chr6.1:3437958-3437977 | MS.gene54659:intron | 15.0% |
| !! | AACTAAATAACATCAATACT+AGG | - | chr6.1:3438401-3438420 | None:intergenic | 20.0% |
| !! | AGTTCATATATTTATTTCAC+AGG | + | chr6.1:3439867-3439886 | MS.gene54659:intron | 20.0% |
| !! | ATAACAAGAAAACAAATAAG+TGG | - | chr6.1:3438766-3438785 | None:intergenic | 20.0% |
| !! | ATAGTGCAAATATTCTAAAT+AGG | - | chr6.1:3439341-3439360 | None:intergenic | 20.0% |
| !! | TATAAATAATGAGAGAATTG+AGG | - | chr6.1:3439806-3439825 | None:intergenic | 20.0% |
| !!! | ATACTTTAAGAATTAAAGTG+CGG | + | chr6.1:3439061-3439080 | MS.gene54659:intron | 20.0% |
| !!! | GTATTGATGTTATTTAGTTT+TGG | + | chr6.1:3438402-3438421 | MS.gene54659:intron | 20.0% |
| !!! | TTAAGTTTAAAATTGTGCAT+TGG | + | chr6.1:3439503-3439522 | MS.gene54659:intron | 20.0% |
| !!! | TTTTTAATGTCAATCATGTT+CGG | - | chr6.1:3439283-3439302 | None:intergenic | 20.0% |
| ! | AATAACAATAACTGGTGTAA+AGG | - | chr6.1:3438235-3438254 | None:intergenic | 25.0% |
| ! | AATATTATGGAGAAACTTAG+TGG | - | chr6.1:3438164-3438183 | None:intergenic | 25.0% |
| ! | AGAAATAGACTTTGGTATTA+CGG | - | chr6.1:3438370-3438389 | None:intergenic | 25.0% |
| ! | ATCAAACTATCAAATTGAAC+AGG | - | chr6.1:3439706-3439725 | None:intergenic | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | - | chr6.1:3439327-3439346 | None:intergenic | 25.0% |
| ! | GTGAATTGTCTCTTATAATA+AGG | + | chr6.1:3438270-3438289 | MS.gene54659:intron | 25.0% |
| ! | GTTTACAAATTATTTACCTC+CGG | + | chr6.1:3438336-3438355 | MS.gene54659:intron | 25.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | - | chr6.1:3439328-3439347 | None:intergenic | 25.0% |
| ! | TCTTTATGTTATGCTTATGA+TGG | + | chr6.1:3438436-3438455 | MS.gene54659:intron | 25.0% |
| ! | TTAGTACATGTTTAGATTGA+CGG | + | chr6.1:3437894-3437913 | MS.gene54659:intron | 25.0% |
| ! | TTAGTATTACGTAAAATGAG+AGG | + | chr6.1:3439034-3439053 | MS.gene54659:intron | 25.0% |
| !! | AAGCACACTTTTCAATATTA+TGG | - | chr6.1:3438177-3438196 | None:intergenic | 25.0% |
| !! | CAATTTTTGCATTTAAGCTA+TGG | + | chr6.1:3440298-3440317 | MS.gene54659:intron | 25.0% |
| !! | CTTCTTCTAAAAAAAGTGAT+AGG | - | chr6.1:3437795-3437814 | None:intergenic | 25.0% |
| !! | TATTTTTCCAGGGTATATTT+GGG | + | chr6.1:3440123-3440142 | MS.gene54659:intron | 25.0% |
| !! | TCGGTTTGAAATCATATAAT+AGG | - | chr6.1:3439264-3439283 | None:intergenic | 25.0% |
| !! | TCTTGTTATCATTGCAATTA+AGG | + | chr6.1:3438777-3438796 | MS.gene54659:intron | 25.0% |
| !! | TTAAGAGTTGTACATGTTTT+TGG | - | chr6.1:3440076-3440095 | None:intergenic | 25.0% |
| !! | TTCTAAAAAAAGTGATAGGA+AGG | - | chr6.1:3437791-3437810 | None:intergenic | 25.0% |
| !! | TTTTCATTGTGCAGTATAAT+TGG | + | chr6.1:3440553-3440572 | MS.gene54659:intron | 25.0% |
| !!! | AATGTCACATTTATTTTTCC+AGG | + | chr6.1:3440112-3440131 | MS.gene54659:intron | 25.0% |
| !!! | ATGTCACATTTATTTTTCCA+GGG | + | chr6.1:3440113-3440132 | MS.gene54659:intron | 25.0% |
| !!! | CTATCACTTTTTTTAGAAGA+AGG | + | chr6.1:3437793-3437812 | MS.gene54659:CDS | 25.0% |
| !!! | TAAGAGACAATTCACTTTTT+TGG | - | chr6.1:3438265-3438284 | None:intergenic | 25.0% |
| !!! | TTATTTAGTTTTGGAGAAAG+TGG | + | chr6.1:3438411-3438430 | MS.gene54659:intron | 25.0% |
| !!! | TTATTTTTCCAGGGTATATT+TGG | + | chr6.1:3440122-3440141 | MS.gene54659:intron | 25.0% |
| AAGACCAATTGTGATTATTG+TGG | - | chr6.1:3440581-3440600 | None:intergenic | 30.0% | |
| AAGACTAAAGTTACTTCATC+TGG | - | chr6.1:3439913-3439932 | None:intergenic | 30.0% | |
| AAGTAGAAGTAGTAATGCTA+AGG | + | chr6.1:3438817-3438836 | MS.gene54659:CDS | 30.0% | |
| ACAGAAATAACAATTTGGAG+TGG | - | chr6.1:3440221-3440240 | None:intergenic | 30.0% | |
| ACCGAACTGTTAAAATAGTT+CGG | + | chr6.1:3439181-3439200 | MS.gene54659:intron | 30.0% | |
| AGAAAAATAGAGTCAAAGCA+TGG | - | chr6.1:3439371-3439390 | None:intergenic | 30.0% | |
| AGACTAAAGTTACTTCATCT+GGG | - | chr6.1:3439912-3439931 | None:intergenic | 30.0% | |
| AGCCAACAGAAATAACAATT+TGG | - | chr6.1:3440226-3440245 | None:intergenic | 30.0% | |
| AGCTACAATTGTTGATATGA+TGG | - | chr6.1:3439956-3439975 | None:intergenic | 30.0% | |
| AGTAGTAATGCTAAGGTAAT+AGG | + | chr6.1:3438824-3438843 | MS.gene54659:CDS | 30.0% | |
| ATTCTTCATATTGGAAGGTA+TGG | + | chr6.1:3440269-3440288 | MS.gene54659:intron | 30.0% | |
| CAATATGAAGAATATCACCA+AGG | - | chr6.1:3440262-3440281 | None:intergenic | 30.0% | |
| GATGATTGAATGTAAATACG+TGG | + | chr6.1:3439150-3439169 | MS.gene54659:intron | 30.0% | |
| GTGATATTCTTCATATTGGA+AGG | + | chr6.1:3440264-3440283 | MS.gene54659:CDS | 30.0% | |
| GTTATCATTGCAATTAAGGA+TGG | + | chr6.1:3438781-3438800 | MS.gene54659:intron | 30.0% | |
| GTTCACTGAATAACAATAAC+TGG | - | chr6.1:3438243-3438262 | None:intergenic | 30.0% | |
| GTTCTATAACTTTGCAAAAG+AGG | - | chr6.1:3440685-3440704 | None:intergenic | 30.0% | |
| TAAACAATCAGTACTTCATC+CGG | - | chr6.1:3438321-3438340 | None:intergenic | 30.0% | |
| TAAATTTCCCAAATATACCC+TGG | - | chr6.1:3440133-3440152 | None:intergenic | 30.0% | |
| TAAGCTATGGAATCAACTTA+TGG | + | chr6.1:3440311-3440330 | MS.gene54659:intron | 30.0% | |
| TCAACTAGGTCAAGTAATAT+GGG | + | chr6.1:3439540-3439559 | MS.gene54659:intron | 30.0% | |
| TCGAATGTTTATATTAGTCC+AGG | - | chr6.1:3439237-3439256 | None:intergenic | 30.0% | |
| TGGTCTTTATGCTGTATTAT+GGG | + | chr6.1:3440594-3440613 | MS.gene54659:CDS | 30.0% | |
| TTTGTGATGACTTTCTACAA+AGG | + | chr6.1:3438872-3438891 | MS.gene54659:CDS | 30.0% | |
| ! | ATATTGAAAAGTGTGCTTCT+TGG | + | chr6.1:3438179-3438198 | MS.gene54659:CDS | 30.0% |
| ! | CTTGGTGATATTCTTCATAT+TGG | + | chr6.1:3440260-3440279 | MS.gene54659:CDS | 30.0% |
| ! | GTATTTGCTAAGTGTAAGTT+TGG | - | chr6.1:3437993-3438012 | None:intergenic | 30.0% |
| ! | TATGATGTCTTTTTGCAGAT+TGG | + | chr6.1:3438133-3438152 | MS.gene54659:intron | 30.0% |
| ! | TGTAAAGGATAAGACCATTT+TGG | - | chr6.1:3438220-3438239 | None:intergenic | 30.0% |
| ! | TTGGTCTTTATGCTGTATTA+TGG | + | chr6.1:3440593-3440612 | MS.gene54659:CDS | 30.0% |
| ! | TTTTGTCAAAATCTCGATGA+TGG | - | chr6.1:3437944-3437963 | None:intergenic | 30.0% |
| !! | ATTGTTATTTCTGTTGGCTT+AGG | + | chr6.1:3440227-3440246 | MS.gene54659:CDS | 30.0% |
| !! | CTCCAAATTGTTATTTCTGT+TGG | + | chr6.1:3440221-3440240 | MS.gene54659:CDS | 30.0% |
| !!! | ACCGAACTATTTTAACAGTT+CGG | - | chr6.1:3439185-3439204 | None:intergenic | 30.0% |
| AAAGACGAATTCATGATCGA+TGG | - | chr6.1:3438899-3438918 | None:intergenic | 35.0% | |
| AACAACTCTGACATTCACTT+TGG | - | chr6.1:3439608-3439627 | None:intergenic | 35.0% | |
| AAGCATAGGCAATAAAGACA+TGG | - | chr6.1:3437746-3437765 | None:intergenic | 35.0% | |
| AATGCAAGTGCTTGGAAAAT+AGG | + | chr6.1:3439991-3440010 | MS.gene54659:CDS | 35.0% | |
| AATTGTAGTGATCATAGGAC+AGG | + | chr6.1:3437659-3437678 | MS.gene54659:CDS | 35.0% | |
| AGATTGACGGTAAATTTGTC+AGG | + | chr6.1:3437907-3437926 | MS.gene54659:intron | 35.0% | |
| AGGACAGGAAACTATTGAAA+TGG | + | chr6.1:3437674-3437693 | MS.gene54659:CDS | 35.0% | |
| AGGTAAGTTTGTCAGAATCA+CGG | + | chr6.1:3437813-3437832 | MS.gene54659:intron | 35.0% | |
| AGTACCAATAGCATAAGCAT+AGG | - | chr6.1:3437760-3437779 | None:intergenic | 35.0% | |
| ATAGGTCAAGTAATATGGGA+CGG | - | chr6.1:3439323-3439342 | None:intergenic | 35.0% | |
| ATTATGGAGAAACTTAGTGG+TGG | - | chr6.1:3438161-3438180 | None:intergenic | 35.0% | |
| ATTGCCTATGCTTATGCTAT+TGG | + | chr6.1:3437753-3437772 | MS.gene54659:CDS | 35.0% | |
| CAAAGCAACAGAAAAGATAG+AGG | + | chr6.1:3440618-3440637 | MS.gene54659:CDS | 35.0% | |
| CAAATTAAAGGACTCAGACA+CGG | - | chr6.1:3440522-3440541 | None:intergenic | 35.0% | |
| GAAAAGATAGAGGAAGATGT+TGG | + | chr6.1:3440628-3440647 | MS.gene54659:CDS | 35.0% | |
| GGTCTTTATGCTGTATTATG+GGG | + | chr6.1:3440595-3440614 | MS.gene54659:CDS | 35.0% | |
| GTCAACTAGGTCAAGTAATA+TGG | + | chr6.1:3439539-3439558 | MS.gene54659:intron | 35.0% | |
| TAGAGATGAGTGAGAGATTT+AGG | - | chr6.1:3440017-3440036 | None:intergenic | 35.0% | |
| TCTCTATAGATGATGACTCT+AGG | - | chr6.1:3440657-3440676 | None:intergenic | 35.0% | |
| TCTTTACTTCATCAACCAGT+CGG | + | chr6.1:3438914-3438933 | MS.gene54659:CDS | 35.0% | |
| TGATATGATGGTAGCAGTTA+TGG | - | chr6.1:3439944-3439963 | None:intergenic | 35.0% | |
| TGTCCTATGATCACTACAAT+TGG | - | chr6.1:3437660-3437679 | None:intergenic | 35.0% | |
| TGTGATTTCAAACACACACT+TGG | + | chr6.1:3438076-3438095 | MS.gene54659:intron | 35.0% | |
| ! | AAGAAGATGGTCCTTTTACA+TGG | + | chr6.1:3437626-3437645 | MS.gene54659:CDS | 35.0% |
| ! | AGATGTTCAGCTCAGATTTT+GGG | + | chr6.1:3438477-3438496 | MS.gene54659:intron | 35.0% |
| ! | ATTTTCCAAGCACTTGCATT+TGG | - | chr6.1:3439991-3440010 | None:intergenic | 35.0% |
| ! | CAGTTCTTTTCAGTGTAGTT+TGG | - | chr6.1:3439655-3439674 | None:intergenic | 35.0% |
| ! | TACCAAAGTCTATTTCTCCA+CGG | + | chr6.1:3438373-3438392 | MS.gene54659:intron | 35.0% |
| !! | TGCAGTAGTATTTTTGTCTC+CGG | + | chr6.1:3438299-3438318 | MS.gene54659:intron | 35.0% |
| !!! | TCATTCTAGCTGTCATTTTC+AGG | + | chr6.1:3438571-3438590 | MS.gene54659:CDS | 35.0% |
| AACATCAATACTAGGTTCCG+TGG | - | chr6.1:3438393-3438412 | None:intergenic | 40.0% | |
| AGACACGTGCGATTACATTT+AGG | - | chr6.1:3439739-3439758 | None:intergenic | 40.0% | |
| ATGGTACAATATCCGACATC+GGG | - | chr6.1:3440408-3440427 | None:intergenic | 40.0% | |
| ATGGTCATTGAACATGAAGG+GGG | + | chr6.1:3440172-3440191 | MS.gene54659:CDS | 40.0% | |
| CATGGTACAATATCCGACAT+CGG | - | chr6.1:3440409-3440428 | None:intergenic | 40.0% | |
| CATGGTCATTGAACATGAAG+GGG | + | chr6.1:3440171-3440190 | MS.gene54659:CDS | 40.0% | |
| CTAGGTCAAGTAATATGGGA+CGG | + | chr6.1:3439544-3439563 | MS.gene54659:intron | 40.0% | |
| CTATGATCACTACAATTGGC+AGG | - | chr6.1:3437656-3437675 | None:intergenic | 40.0% | |
| CTGCCAATTGTAGTGATCAT+AGG | + | chr6.1:3437654-3437673 | MS.gene54659:CDS | 40.0% | |
| GAATCTTTAATGGTTCGTCC+TGG | + | chr6.1:3439216-3439235 | MS.gene54659:intron | 40.0% | |
| GCAATAGGGTAATGCCAAAA+TGG | + | chr6.1:3438203-3438222 | MS.gene54659:intron | 40.0% | |
| GCATGGTCATTGAACATGAA+GGG | + | chr6.1:3440170-3440189 | MS.gene54659:CDS | 40.0% | |
| GCTAGAATGAAAGTGAAAGC+AGG | - | chr6.1:3438561-3438580 | None:intergenic | 40.0% | |
| GGAAGTCAATTGTCACATTC+TGG | - | chr6.1:3439785-3439804 | None:intergenic | 40.0% | |
| GGAGCCACAATAATCACAAT+TGG | + | chr6.1:3440574-3440593 | MS.gene54659:CDS | 40.0% | |
| GGCTTAGGAGTTATATTCCT+TGG | + | chr6.1:3440242-3440261 | MS.gene54659:CDS | 40.0% | |
| GTTCAATGACCATGCAATAG+CGG | - | chr6.1:3440165-3440184 | None:intergenic | 40.0% | |
| TATGAAGCCCAGATACTTCT+CGG | + | chr6.1:3440371-3440390 | MS.gene54659:intron | 40.0% | |
| TGCATGGTCATTGAACATGA+AGG | + | chr6.1:3440169-3440188 | MS.gene54659:CDS | 40.0% | |
| TGGCAGGAAATCCATGTAAA+AGG | - | chr6.1:3437640-3437659 | None:intergenic | 40.0% | |
| TGGTATTACGGAGTTTGATC+CGG | - | chr6.1:3438358-3438377 | None:intergenic | 40.0% | |
| TTCCGTGGAGAAATAGACTT+TGG | - | chr6.1:3438378-3438397 | None:intergenic | 40.0% | |
| ! | AATTTGGAGTGGCTTGAATG+AGG | - | chr6.1:3440210-3440229 | None:intergenic | 40.0% |
| ! | CAGATGTTCAGCTCAGATTT+TGG | + | chr6.1:3438476-3438495 | MS.gene54659:intron | 40.0% |
| ! | GATGTTCAGCTCAGATTTTG+GGG | + | chr6.1:3438478-3438497 | MS.gene54659:intron | 40.0% |
| ! | GGAAGCATAATATCGATAGC+AGG | + | chr6.1:3438845-3438864 | MS.gene54659:CDS | 40.0% |
| ! | TGCTTCAGCAATTGGTAATC+TGG | + | chr6.1:3438533-3438552 | MS.gene54659:CDS | 40.0% |
| !! | ACCTAATCCGAGAAGTATCT+GGG | - | chr6.1:3440381-3440400 | None:intergenic | 40.0% |
| !!! | CTACGCTACATTTTTCAGGT+AGG | + | chr6.1:3439010-3439029 | MS.gene54659:intron | 40.0% |
| AATGACTACCGTGTCAGTGT+CGG | - | chr6.1:3440433-3440452 | None:intergenic | 45.0% | |
| AGTGTGCTTCTTGGAGCAAT+AGG | + | chr6.1:3438188-3438207 | MS.gene54659:CDS | 45.0% | |
| CAGTTCCAAATGCAAGTGCT+TGG | + | chr6.1:3439983-3440002 | MS.gene54659:CDS | 45.0% | |
| CATCGGACACAACAAGTACA+CGG | - | chr6.1:3440498-3440517 | None:intergenic | 45.0% | |
| CCAACACTTGCTTCAGCAAT+TGG | + | chr6.1:3438525-3438544 | MS.gene54659:CDS | 45.0% | |
| CCAATTGCTGAAGCAAGTGT+TGG | - | chr6.1:3438528-3438547 | None:intergenic | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | + | chr6.1:3439548-3439567 | MS.gene54659:intron | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | - | chr6.1:3439567-3439548 | None:intergenic | 45.0% | |
| GTGTGCTTCTTGGAGCAATA+GGG | + | chr6.1:3438189-3438208 | MS.gene54659:CDS | 45.0% | |
| GTTGTTCATCCCTTGAAGTG+TGG | - | chr6.1:3437724-3437743 | None:intergenic | 45.0% | |
| TATTACGGAGTTTGATCCGG+AGG | - | chr6.1:3438355-3438374 | None:intergenic | 45.0% | |
| TCAAAGCAGCCACACTTCAA+GGG | + | chr6.1:3437712-3437731 | MS.gene54659:CDS | 45.0% | |
| TGGTACAATATCCGACATCG+GGG | - | chr6.1:3440407-3440426 | None:intergenic | 45.0% | |
| TGTTAGCAGAATGCCACCAA+TGG | - | chr6.1:3438969-3438988 | None:intergenic | 45.0% | |
| TTCAAAGCAGCCACACTTCA+AGG | + | chr6.1:3437711-3437730 | MS.gene54659:CDS | 45.0% | |
| ! | CATGGCAGTGGATTCAAGTT+GGG | + | chr6.1:3438943-3438962 | MS.gene54659:CDS | 45.0% |
| ! | GTCGCTACGCTACATTTTTC+AGG | + | chr6.1:3439006-3439025 | MS.gene54659:CDS | 45.0% |
| ! | TCATGGCAGTGGATTCAAGT+TGG | + | chr6.1:3438942-3438961 | MS.gene54659:CDS | 45.0% |
| !! | CACCTAATCCGAGAAGTATC+TGG | - | chr6.1:3440382-3440401 | None:intergenic | 45.0% |
| !!! | GCTCAGATTTTGGGGTACAT+TGG | + | chr6.1:3438486-3438505 | MS.gene54659:CDS | 45.0% |
| AAGGACTCAGACACGGACAT+CGG | - | chr6.1:3440515-3440534 | None:intergenic | 50.0% | |
| CATACGTGACAGGGTCAACT+AGG | + | chr6.1:3439526-3439545 | MS.gene54659:intron | 50.0% | |
| GCCCAGATACTTCTCGGATT+AGG | + | chr6.1:3440377-3440396 | MS.gene54659:intron | 50.0% | |
| GGTACAATATCCGACATCGG+GGG | - | chr6.1:3440406-3440425 | None:intergenic | 50.0% | |
| GGTCAAGTAATATGGGACGG+AGG | + | chr6.1:3439547-3439566 | MS.gene54659:intron | 50.0% | |
| GGTCAAGTAATATGGGACGG+AGG | - | chr6.1:3439566-3439547 | None:intergenic | 50.0% | |
| GTAATCGCACGTGTCTACGT+CGG | + | chr6.1:3439743-3439762 | MS.gene54659:intron | 50.0% | |
| TACCATGTCCGACACTGACA+CGG | + | chr6.1:3440422-3440441 | MS.gene54659:intron | 50.0% | |
| TCAGCAGTACCGCTATTGCA+TGG | + | chr6.1:3440153-3440172 | MS.gene54659:CDS | 50.0% | |
| ! | GTGCATTGGCATACGTGACA+GGG | + | chr6.1:3439517-3439536 | MS.gene54659:intron | 50.0% |
| ! | TCAACCAGTCGGCTTTGTCA+TGG | + | chr6.1:3438925-3438944 | MS.gene54659:CDS | 50.0% |
| ! | TGTGCATTGGCATACGTGAC+AGG | + | chr6.1:3439516-3439535 | MS.gene54659:intron | 50.0% |
| !! | GATTCAAGTTGGGCCATTGG+TGG | + | chr6.1:3438953-3438972 | MS.gene54659:CDS | 50.0% |
| !! | GTGGATTCAAGTTGGGCCAT+TGG | + | chr6.1:3438950-3438969 | MS.gene54659:CDS | 50.0% |
| ACTGCCATGACAAAGCCGAC+TGG | - | chr6.1:3438932-3438951 | None:intergenic | 55.0% | |
| GATTAGGTGTCCCCCGATGT+CGG | + | chr6.1:3440393-3440412 | MS.gene54659:intron | 55.0% | |
| ! | AGTCGGCTTTGTCATGGCAG+TGG | + | chr6.1:3438931-3438950 | MS.gene54659:CDS | 55.0% |
| ! | TACCGTGTCAGTGTCGGACA+TGG | - | chr6.1:3440427-3440446 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 3437621 | 3440741 | 3437621 | ID=MS.gene54659 |
| chr6.1 | mRNA | 3437621 | 3440741 | 3437621 | ID=MS.gene54659.t1;Parent=MS.gene54659 |
| chr6.1 | exon | 3437621 | 3437814 | 3437621 | ID=MS.gene54659.t1.exon1;Parent=MS.gene54659.t1 |
| chr6.1 | CDS | 3437621 | 3437814 | 3437621 | ID=cds.MS.gene54659.t1;Parent=MS.gene54659.t1 |
| chr6.1 | exon | 3438151 | 3438210 | 3438151 | ID=MS.gene54659.t1.exon2;Parent=MS.gene54659.t1 |
| chr6.1 | CDS | 3438151 | 3438210 | 3438151 | ID=cds.MS.gene54659.t1;Parent=MS.gene54659.t1 |
| chr6.1 | exon | 3438479 | 3438592 | 3438479 | ID=MS.gene54659.t1.exon3;Parent=MS.gene54659.t1 |
| chr6.1 | CDS | 3438479 | 3438592 | 3438479 | ID=cds.MS.gene54659.t1;Parent=MS.gene54659.t1 |
| chr6.1 | exon | 3438799 | 3439027 | 3438799 | ID=MS.gene54659.t1.exon4;Parent=MS.gene54659.t1 |
| chr6.1 | CDS | 3438799 | 3439027 | 3438799 | ID=cds.MS.gene54659.t1;Parent=MS.gene54659.t1 |
| chr6.1 | exon | 3439889 | 3440047 | 3439889 | ID=MS.gene54659.t1.exon5;Parent=MS.gene54659.t1 |
| chr6.1 | CDS | 3439889 | 3440047 | 3439889 | ID=cds.MS.gene54659.t1;Parent=MS.gene54659.t1 |
| chr6.1 | exon | 3440134 | 3440285 | 3440134 | ID=MS.gene54659.t1.exon6;Parent=MS.gene54659.t1 |
| chr6.1 | CDS | 3440134 | 3440285 | 3440134 | ID=cds.MS.gene54659.t1;Parent=MS.gene54659.t1 |
| chr6.1 | exon | 3440567 | 3440741 | 3440567 | ID=MS.gene54659.t1.exon7;Parent=MS.gene54659.t1 |
| chr6.1 | CDS | 3440567 | 3440741 | 3440567 | ID=cds.MS.gene54659.t1;Parent=MS.gene54659.t1 |
| Gene Sequence |
| Protein sequence |
