Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54717.t1 | XP_024632737.1 | 85.2 | 731 | 103 | 2 | 1 | 728 | 1 | 729 | 0.00E+00 | 1274.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54717.t1 | A0A396GU28 | 50.9 | 1032 | 446 | 11 | 19 | 1026 | 46 | 1040 | 7.0e-281 | 976.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene54717 | 0.80878 | 2.62E-50 | -1.69E-46 |
| MS.gene050021 | MS.gene54717 | 0.805162 | 1.53E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene54717 | 0.82722 | 1.76E-54 | -1.69E-46 |
| MS.gene050266 | MS.gene54717 | 0.805691 | 1.18E-49 | -1.69E-46 |
| MS.gene050430 | MS.gene54717 | 0.812155 | 4.89E-51 | -1.69E-46 |
| MS.gene051181 | MS.gene54717 | 0.813212 | 2.87E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene54717 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene54717 | 0.813895 | 2.03E-51 | -1.69E-46 |
| MS.gene051332 | MS.gene54717 | 0.801519 | 8.67E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene54717 | 0.822136 | 2.78E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene54717 | 0.807961 | 3.91E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene54717 | 0.814438 | 1.54E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene54717 | 0.806528 | 7.87E-50 | -1.69E-46 |
| MS.gene052447 | MS.gene54717 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene54717 | 0.820114 | 8.14E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene54717 | 0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene54717 | 0.816504 | 5.35E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene54717 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene54717 | 0.811568 | 6.56E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene54717 | 0.800385 | 1.48E-48 | -1.69E-46 |
| MS.gene053296 | MS.gene54717 | 0.80158 | 8.42E-49 | -1.69E-46 |
| MS.gene053641 | MS.gene54717 | 0.807699 | 4.45E-50 | -1.69E-46 |
| MS.gene053974 | MS.gene54717 | 0.814168 | 1.77E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene54717 | 0.803839 | 2.88E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene54717 | 0.822455 | 2.35E-53 | -1.69E-46 |
| MS.gene05422 | MS.gene54717 | 0.803866 | 2.84E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene54717 | 0.827514 | 1.50E-54 | -1.69E-46 |
| MS.gene054291 | MS.gene54717 | -0.838255 | 3.21E-57 | -1.69E-46 |
| MS.gene05435 | MS.gene54717 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene54717 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene54717 | 0.82101 | 5.07E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene54717 | 0.835216 | 1.91E-56 | -1.69E-46 |
| MS.gene055056 | MS.gene54717 | 0.823627 | 1.25E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene54717 | 0.817696 | 2.88E-52 | -1.69E-46 |
| MS.gene055357 | MS.gene54717 | 0.821511 | 3.88E-53 | -1.69E-46 |
| MS.gene055586 | MS.gene54717 | 0.800296 | 1.54E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene54717 | 0.805674 | 1.19E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene54717 | 0.822072 | 2.88E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene54717 | 0.804996 | 1.65E-49 | -1.69E-46 |
| MS.gene056854 | MS.gene54717 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene54717 | 0.814129 | 1.80E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene54717 | 0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene058515 | MS.gene54717 | 0.808116 | 3.63E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene54717 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene54717 | 0.822454 | 2.35E-53 | -1.69E-46 |
| MS.gene05925 | MS.gene54717 | 0.82708 | 1.91E-54 | -1.69E-46 |
| MS.gene059272 | MS.gene54717 | 0.814226 | 1.72E-51 | -1.69E-46 |
| MS.gene059276 | MS.gene54717 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene059437 | MS.gene54717 | 0.803951 | 2.73E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene54717 | 0.826311 | 2.91E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene54717 | 0.807729 | 4.38E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene54717 | 0.800803 | 1.21E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54717.t1 | MTR_8g070580 | 53.213 | 498 | 146 | 8 | 1 | 498 | 1 | 411 | 3.45e-160 | 482 |
| MS.gene54717.t1 | MTR_4g028910 | 44.884 | 303 | 103 | 4 | 147 | 447 | 170 | 410 | 1.85e-70 | 242 |
| MS.gene54717.t1 | MTR_4g028910 | 40.351 | 114 | 56 | 2 | 1 | 102 | 81 | 194 | 3.71e-14 | 76.6 |
| MS.gene54717.t1 | MTR_2g048835 | 31.061 | 264 | 151 | 4 | 586 | 848 | 191 | 424 | 1.88e-32 | 133 |
| MS.gene54717.t1 | MTR_8g464800 | 33.702 | 181 | 119 | 1 | 574 | 753 | 1 | 181 | 1.57e-29 | 122 |
| MS.gene54717.t1 | MTR_7g090610 | 29.224 | 219 | 131 | 2 | 630 | 848 | 1 | 195 | 2.44e-24 | 106 |
| MS.gene54717.t1 | MTR_5g081480 | 31.718 | 227 | 136 | 4 | 717 | 932 | 651 | 869 | 1.67e-23 | 107 |
| MS.gene54717.t1 | MTR_5g081480 | 32.530 | 166 | 99 | 3 | 318 | 471 | 462 | 626 | 2.02e-20 | 98.2 |
| MS.gene54717.t1 | MTR_1g046450 | 70.690 | 58 | 17 | 0 | 392 | 449 | 1 | 58 | 3.73e-22 | 94.4 |
| MS.gene54717.t1 | MTR_3g049490 | 31.429 | 245 | 98 | 7 | 782 | 1026 | 11 | 185 | 2.59e-20 | 90.1 |
| MS.gene54717.t1 | MTR_6g462630 | 35.556 | 135 | 78 | 1 | 714 | 848 | 26 | 151 | 3.90e-20 | 90.5 |
| MS.gene54717.t1 | MTR_1g053290 | 36.296 | 135 | 59 | 3 | 374 | 494 | 79 | 200 | 5.46e-20 | 89.7 |
| MS.gene54717.t1 | MTR_0152s0010 | 47.368 | 76 | 40 | 0 | 590 | 665 | 1 | 76 | 1.59e-19 | 85.1 |
| MS.gene54717.t1 | MTR_0152s0060 | 40.351 | 114 | 52 | 2 | 557 | 669 | 17 | 115 | 2.24e-19 | 92.0 |
| MS.gene54717.t1 | MTR_2g018850 | 26.667 | 150 | 106 | 2 | 354 | 500 | 302 | 450 | 4.10e-14 | 77.0 |
| MS.gene54717.t1 | MTR_1g041225 | 58.491 | 53 | 22 | 0 | 467 | 519 | 1 | 53 | 4.58e-14 | 70.1 |
| MS.gene54717.t1 | MTR_6g022470 | 35.135 | 111 | 64 | 1 | 738 | 848 | 29 | 131 | 5.69e-14 | 73.9 |
| MS.gene54717.t1 | MTR_5g068970 | 55.357 | 56 | 25 | 0 | 535 | 590 | 46 | 101 | 1.44e-13 | 68.2 |
| MS.gene54717.t1 | MTR_8g040660 | 28.000 | 175 | 73 | 3 | 673 | 846 | 13 | 135 | 1.35e-12 | 69.7 |
| MS.gene54717.t1 | MTR_2g020400 | 32.759 | 116 | 68 | 3 | 734 | 848 | 1 | 107 | 2.81e-12 | 67.0 |
| MS.gene54717.t1 | MTR_6g059380 | 41.667 | 72 | 41 | 1 | 27 | 97 | 443 | 514 | 8.68e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54717.t1 | AT3G05850 | 28.020 | 596 | 376 | 14 | 274 | 848 | 207 | 770 | 7.59e-61 | 223 |
| MS.gene54717.t1 | AT1G06740 | 24.789 | 593 | 405 | 10 | 271 | 848 | 156 | 722 | 2.68e-53 | 200 |
| MS.gene54717.t1 | AT5G15685 | 30.640 | 297 | 202 | 3 | 248 | 541 | 153 | 448 | 1.86e-43 | 166 |
| MS.gene54717.t1 | AT1G64260 | 22.181 | 541 | 393 | 14 | 274 | 797 | 188 | 717 | 2.23e-26 | 116 |
| MS.gene54717.t1 | AT1G64260 | 22.181 | 541 | 393 | 14 | 274 | 797 | 188 | 717 | 2.23e-26 | 116 |
| MS.gene54717.t1 | AT1G64255 | 21.892 | 539 | 382 | 10 | 274 | 789 | 195 | 717 | 9.37e-18 | 89.4 |
| MS.gene54717.t1 | AT1G64253 | 22.443 | 352 | 249 | 10 | 480 | 815 | 3 | 346 | 6.22e-14 | 75.5 |
Find 221 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGACTGTGTTGATTTCTTT+TGG | 0.156896 | 6.1:-4085018 | None:intergenic |
| CTTAGCTGGCCCTTTCTTCT+TGG | 0.184981 | 6.1:-4085256 | None:intergenic |
| ACTATTTGTGGCTTTAAAAT+TGG | 0.188508 | 6.1:-4085576 | None:intergenic |
| TTGCTAAACCTCATGTAAAA+TGG | 0.191414 | 6.1:-4083306 | None:intergenic |
| TCATACGAGGTGTGAGTTTC+AGG | 0.226070 | 6.1:-4083446 | None:intergenic |
| CTGGTTTCTTGAACTGTTAT+TGG | 0.228318 | 6.1:+4083884 | MS.gene54717:CDS |
| TTATTATCTCCACTCCAATT+TGG | 0.239817 | 6.1:-4084537 | None:intergenic |
| ACTACTTGTAGACCATTAAT+TGG | 0.242604 | 6.1:+4083732 | MS.gene54717:CDS |
| TCAAGTTGTGGCCATAATTT+TGG | 0.255565 | 6.1:-4084870 | None:intergenic |
| GAGTTGCTCACAGTCTTCTT+TGG | 0.271354 | 6.1:-4085519 | None:intergenic |
| CCAATGTTCCTGCACTTCTT+AGG | 0.290734 | 6.1:-4085621 | None:intergenic |
| CCACCTGTTGCAACCAATAC+TGG | 0.295863 | 6.1:+4085405 | MS.gene54717:CDS |
| AGTCTTCTTTGGGTCAGTTT+TGG | 0.303068 | 6.1:-4085508 | None:intergenic |
| CTGAGGGCTGGTCTCCAAAT+TGG | 0.311486 | 6.1:+4084523 | MS.gene54717:CDS |
| AATCTTGTGGCTGCAGGAAA+TGG | 0.312971 | 6.1:+4084619 | MS.gene54717:CDS |
| TCTCAAGTGCTGAACTAATT+AGG | 0.314072 | 6.1:+4083187 | MS.gene54717:CDS |
| GCAGTTGTGGTTGCAGTTGA+TGG | 0.319887 | 6.1:-4085306 | None:intergenic |
| AGACCATTAATTGGTCTAGA+TGG | 0.320166 | 6.1:+4083741 | MS.gene54717:CDS |
| TTAGCTGGCCCTTTCTTCTT+GGG | 0.325227 | 6.1:-4085255 | None:intergenic |
| TAAGTAGCTATCAGTTATAT+AGG | 0.331539 | 6.1:+4083517 | MS.gene54717:CDS |
| GCTAGATTTACAGTTTATAA+AGG | 0.340332 | 6.1:+4084564 | MS.gene54717:CDS |
| GTGAGAGAGTTAGGTGTAAA+GGG | 0.346936 | 6.1:+4082604 | MS.gene54717:CDS |
| CACCCATCTAGACCAATTAA+TGG | 0.348906 | 6.1:-4083744 | None:intergenic |
| TCTTGCCACCATATGTTAGA+AGG | 0.349630 | 6.1:+4084904 | MS.gene54717:CDS |
| CTTGGTGCTTTCTTCTTAGC+TGG | 0.350240 | 6.1:-4085270 | None:intergenic |
| TACTTCAAATGTTCAAGCTT+TGG | 0.357622 | 6.1:+4082984 | MS.gene54717:CDS |
| GAAGAGAAAGTCTGATGAAA+TGG | 0.358822 | 6.1:+4085647 | MS.gene54717:CDS |
| TCCAACAGCTTGTTAATCAT+TGG | 0.361353 | 6.1:-4084483 | None:intergenic |
| GGACATTTACTAGCAGCAAT+TGG | 0.364397 | 6.1:+4083789 | MS.gene54717:CDS |
| CTAACATATGGTGGCAAGAT+TGG | 0.369890 | 6.1:-4084900 | None:intergenic |
| AGTTGCTCACAGTCTTCTTT+GGG | 0.372185 | 6.1:-4085518 | None:intergenic |
| GATACAATGGTTACTTTAGT+GGG | 0.374271 | 6.1:+4082488 | MS.gene54717:CDS |
| AGGGGTGATACTTATGAGTA+TGG | 0.376035 | 6.1:+4082532 | MS.gene54717:CDS |
| TACTTTGAGGCATTGTTGTC+AGG | 0.377959 | 6.1:-4081979 | None:intergenic |
| GACTCATATGCTGTTAATCT+TGG | 0.379862 | 6.1:+4084591 | MS.gene54717:CDS |
| ATCCTAACTTTGAATACAAA+AGG | 0.380287 | 6.1:+4082512 | MS.gene54717:CDS |
| GTAGGTAGTTGGTCTAGGGC+TGG | 0.380626 | 6.1:+4084279 | MS.gene54717:CDS |
| TTCAGATTCAAAAGGGGAAT+AGG | 0.382047 | 6.1:-4082809 | None:intergenic |
| GAAAAGCTAGTGAGAGAGTT+AGG | 0.382864 | 6.1:+4082595 | MS.gene54717:CDS |
| GTTGGTACAGTCTTGGTTGC+AGG | 0.384104 | 6.1:-4085360 | None:intergenic |
| GCCTCCTTCAATTGCTCACC+TGG | 0.384592 | 6.1:-4084150 | None:intergenic |
| GAAGAAAGCACCAAGCAAAA+AGG | 0.387960 | 6.1:+4085278 | MS.gene54717:CDS |
| ACTGACTGTTGTGTTCCAAT+AGG | 0.395150 | 6.1:-4085672 | None:intergenic |
| ATGCGCATATTGCTCATCTA+TGG | 0.396606 | 6.1:-4083574 | None:intergenic |
| AAGATGAAGTGGGTGGATAA+AGG | 0.398457 | 6.1:+4081901 | None:intergenic |
| GCTGTTATATCTCTTGTTGA+TGG | 0.401233 | 6.1:+4084387 | MS.gene54717:CDS |
| TCTGATGAAATGGAGCCTAT+TGG | 0.403360 | 6.1:+4085657 | MS.gene54717:CDS |
| GCTTGCACCAGGGGAGAATC+AGG | 0.407445 | 6.1:+4085112 | MS.gene54717:CDS |
| ATCTTCAAGTCTTGCTGCAT+CGG | 0.409753 | 6.1:-4083031 | None:intergenic |
| TCAAGATTTATCACTTGATC+AGG | 0.410785 | 6.1:-4082952 | None:intergenic |
| TAGGTAGTTGGTCTAGGGCT+GGG | 0.415978 | 6.1:+4084280 | MS.gene54717:CDS |
| TGCTAAACCTCATGTAAAAT+GGG | 0.420732 | 6.1:-4083305 | None:intergenic |
| AGTGAGAGAGTTAGGTGTAA+AGG | 0.423643 | 6.1:+4082603 | MS.gene54717:CDS |
| CCTGGTGCCCTTCTAACATA+TGG | 0.427162 | 6.1:-4084912 | None:intergenic |
| TCTTCAAGTCTTGCTGCATC+GGG | 0.428938 | 6.1:-4083030 | None:intergenic |
| GTTCCACTTTCAGATTCAAA+AGG | 0.433601 | 6.1:-4082817 | None:intergenic |
| CTTGTAATGGACCAAAATTA+TGG | 0.435277 | 6.1:+4084859 | MS.gene54717:CDS |
| TTTATGTTAAGAAAAGTGAT+AGG | 0.437204 | 6.1:+4083250 | MS.gene54717:CDS |
| ATGATGTAGGTAGTTGGTCT+AGG | 0.439894 | 6.1:+4084274 | MS.gene54717:CDS |
| TTCAAATGTTCAAGCTTTGG+TGG | 0.440053 | 6.1:+4082987 | MS.gene54717:CDS |
| GTCCATTACAAGGCAGTATG+AGG | 0.442151 | 6.1:-4084848 | None:intergenic |
| CAGATGACTATGTGGCTCAT+TGG | 0.444024 | 6.1:+4084703 | MS.gene54717:CDS |
| ATCTTGTGGCTGCAGGAAAT+GGG | 0.445707 | 6.1:+4084620 | MS.gene54717:CDS |
| AGATACAATGGTTACTTTAG+TGG | 0.447944 | 6.1:+4082487 | MS.gene54717:CDS |
| AAGTAGCTATCAGTTATATA+GGG | 0.450108 | 6.1:+4083518 | MS.gene54717:CDS |
| TCCAATGATTAACAAGCTGT+TGG | 0.450187 | 6.1:+4084482 | MS.gene54717:CDS |
| GATGCTTCTGTTGTGGTTGA+AGG | 0.452796 | 6.1:-4085336 | None:intergenic |
| TCTGAAAGAGTTAGTGAAGA+TGG | 0.454094 | 6.1:+4082874 | MS.gene54717:CDS |
| CTGTTATTGGCTGACTTGAA+TGG | 0.454383 | 6.1:+4083897 | MS.gene54717:CDS |
| TCTGTTGTGGTTGAAGGTGT+TGG | 0.455131 | 6.1:-4085330 | None:intergenic |
| TCCACTACTGCAAATGCAAT+TGG | 0.456140 | 6.1:-4083837 | None:intergenic |
| CTAGCAGCAATTGGGAAAGA+TGG | 0.457434 | 6.1:+4083798 | MS.gene54717:CDS |
| CAATGAGCCACATAGTCATC+TGG | 0.458015 | 6.1:-4084702 | None:intergenic |
| GACATTTACTAGCAGCAATT+GGG | 0.459543 | 6.1:+4083790 | MS.gene54717:CDS |
| CAGTGTAAAGATAGTGATGC+TGG | 0.462404 | 6.1:+4083654 | MS.gene54717:CDS |
| AAGTGATAGGAAGAGGGTTG+TGG | 0.464601 | 6.1:+4083263 | MS.gene54717:CDS |
| TTAAGAAAAGTGATAGGAAG+AGG | 0.467754 | 6.1:+4083256 | MS.gene54717:CDS |
| GAGATGAGTGAGCATGATGT+AGG | 0.469277 | 6.1:+4084261 | MS.gene54717:CDS |
| AAGGTTCATAGCTGAGTATA+AGG | 0.471702 | 6.1:+4082708 | MS.gene54717:CDS |
| TCCTAACTTTGAATACAAAA+GGG | 0.472525 | 6.1:+4082513 | MS.gene54717:CDS |
| TTCCACTTTCAGATTCAAAA+GGG | 0.474526 | 6.1:-4082816 | None:intergenic |
| CATTAATGAAGCTGCTTGGA+AGG | 0.475001 | 6.1:+4084239 | MS.gene54717:CDS |
| AATCTGTGCTCATGAGCATC+AGG | 0.478855 | 6.1:-4084087 | None:intergenic |
| CTGTTATATCTCTTGTTGAT+GGG | 0.479210 | 6.1:+4084388 | MS.gene54717:CDS |
| AGAACCACTCAGTGAGGATA+AGG | 0.481629 | 6.1:+4082461 | MS.gene54717:CDS |
| TAAGAGCAATTAAAAGTGAT+GGG | 0.484032 | 6.1:+4082677 | MS.gene54717:CDS |
| ACCAATTGCATTTGCAGTAG+TGG | 0.484367 | 6.1:+4083836 | MS.gene54717:CDS |
| TGAAGGTGTTGGTGCAGTTG+TGG | 0.485630 | 6.1:-4085319 | None:intergenic |
| TATGAGGATAAAGAAATTGA+AGG | 0.486370 | 6.1:+4083464 | MS.gene54717:CDS |
| AACCTCATACTGCCTTGTAA+TGG | 0.488394 | 6.1:+4084846 | MS.gene54717:CDS |
| CCTTTCTTCTTGGGTGCAAG+TGG | 0.489398 | 6.1:-4085246 | None:intergenic |
| TTGTGTGTTAAACATCTGTA+TGG | 0.489585 | 6.1:+4084108 | MS.gene54717:CDS |
| TAGGGCTAAGAAGAAGTCTC+TGG | 0.490854 | 6.1:+4083536 | MS.gene54717:CDS |
| GCTTGAGGTTGCTGAACAGT+TGG | 0.494368 | 6.1:-4085222 | None:intergenic |
| CTGAAAGAGTTAGTGAAGAT+GGG | 0.494930 | 6.1:+4082875 | MS.gene54717:CDS |
| CCACTTGCACCCAAGAAGAA+AGG | 0.496782 | 6.1:+4085246 | MS.gene54717:CDS |
| GGTCCAGTATTGGTTGCAAC+AGG | 0.498094 | 6.1:-4085408 | None:intergenic |
| TGAAACTCACACCTCGTATG+AGG | 0.499300 | 6.1:+4083448 | MS.gene54717:CDS |
| TGAAAATGTATATCACAGAT+AGG | 0.500546 | 6.1:+4084412 | MS.gene54717:CDS |
| TGAAGTTAACCTAGTTGACT+TGG | 0.503825 | 6.1:+4082573 | MS.gene54717:CDS |
| AGGTTGCTGAACAGTTGGAT+TGG | 0.509702 | 6.1:-4085217 | None:intergenic |
| GTTTGTACCTGATTCTCCCC+TGG | 0.510072 | 6.1:-4085119 | None:intergenic |
| AAACAAAGGACGCATGGGAC+TGG | 0.510481 | 6.1:+4083865 | MS.gene54717:CDS |
| AGTAGTGGACGCTGAAACAA+AGG | 0.510518 | 6.1:+4083851 | MS.gene54717:CDS |
| CACTTGCACCCAAGAAGAAA+GGG | 0.511746 | 6.1:+4085247 | MS.gene54717:CDS |
| TGCAGGAAATGGGATCTGTC+TGG | 0.512144 | 6.1:+4084630 | MS.gene54717:CDS |
| CTAAGAGCAATTAAAAGTGA+TGG | 0.512478 | 6.1:+4082676 | MS.gene54717:CDS |
| ACTGTGTGGTATGCTGTGGC+TGG | 0.512520 | 6.1:+4082634 | MS.gene54717:CDS |
| TGCAGCAGTTGGTACAGTCT+TGG | 0.514704 | 6.1:-4085367 | None:intergenic |
| TGAGAGAGTTAGGTGTAAAG+GGG | 0.516554 | 6.1:+4082605 | MS.gene54717:CDS |
| AGAACATTAATGAAGCTGCT+TGG | 0.516759 | 6.1:+4084235 | MS.gene54717:CDS |
| CACATGCAATTGCTTGCATA+TGG | 0.520343 | 6.1:+4084664 | MS.gene54717:CDS |
| GAGAGAGTTAGGTGTAAAGG+GGG | 0.521044 | 6.1:+4082606 | MS.gene54717:CDS |
| ACTATGTGGCTCATTGGTAC+AGG | 0.523538 | 6.1:+4084709 | MS.gene54717:CDS |
| GAATTGTTGAGGAGCAATCC+TGG | 0.524805 | 6.1:+4083615 | MS.gene54717:CDS |
| ACAGTGTTCAAGCAAGTTGA+TGG | 0.525361 | 6.1:-4085432 | None:intergenic |
| ACATATGGTGGCAAGATTGG+TGG | 0.525632 | 6.1:-4084897 | None:intergenic |
| GTGACAGTGTTGCTTGCAGA+TGG | 0.530301 | 6.1:-4085486 | None:intergenic |
| TGCAGGTGATGCTTCTGTTG+TGG | 0.530745 | 6.1:-4085343 | None:intergenic |
| CAAGCAATTGCATGTGGACA+AGG | 0.531261 | 6.1:-4084657 | None:intergenic |
| ACATCCAGGTGAGCAATTGA+AGG | 0.532118 | 6.1:+4084146 | MS.gene54717:CDS |
| TTTCATTTCAGACCAGCAAA+AGG | 0.532385 | 6.1:+4083941 | MS.gene54717:CDS |
| GGTGACAGGATGCTTGCACC+AGG | 0.532698 | 6.1:+4085101 | MS.gene54717:CDS |
| GACCATTAATTGGTCTAGAT+GGG | 0.533441 | 6.1:+4083742 | MS.gene54717:CDS |
| GACTATATGTTGAGGTATGA+TGG | 0.533838 | 6.1:+4084450 | MS.gene54717:CDS |
| ACTATGATGAGGGCTTTGAC+TGG | 0.534289 | 6.1:+4082917 | MS.gene54717:CDS |
| AGGATAAGGTTTAGATACAA+TGG | 0.537914 | 6.1:+4082475 | MS.gene54717:CDS |
| ATGTTAGAAGGGCACCAGGC+AGG | 0.538427 | 6.1:+4084916 | MS.gene54717:CDS |
| TCATGGTGCCTAAGAAGTGC+AGG | 0.538945 | 6.1:+4085613 | MS.gene54717:CDS |
| AGTTGATGGTGGTCCAGTAT+TGG | 0.539239 | 6.1:-4085418 | None:intergenic |
| GTAAGAAGGAAGCTGAGGGC+TGG | 0.541575 | 6.1:+4084511 | MS.gene54717:CDS |
| CCATATGTTAGAAGGGCACC+AGG | 0.541887 | 6.1:+4084912 | MS.gene54717:CDS |
| CATAATGCTAGGACATGCTA+TGG | 0.543257 | 6.1:+4085068 | MS.gene54717:CDS |
| GGTTGAATTTAACAAGGCAA+TGG | 0.543685 | 6.1:+4084203 | MS.gene54717:CDS |
| CCTAAGAAGTGCAGGAACAT+TGG | 0.544024 | 6.1:+4085621 | MS.gene54717:CDS |
| AACTTTAAGAAGAGACATCC+AGG | 0.546993 | 6.1:+4084132 | MS.gene54717:CDS |
| TGAAGGAGGCTTGTAAAGAA+AGG | 0.547771 | 6.1:+4083481 | MS.gene54717:CDS |
| AAACAGTCTCAATCTAGTGC+TGG | 0.548939 | 6.1:+4084978 | MS.gene54717:CDS |
| GCTGTTGGATAGGTGTAAGA+AGG | 0.549902 | 6.1:+4084497 | MS.gene54717:CDS |
| CGCTGAAACAAAGGACGCAT+GGG | 0.550123 | 6.1:+4083860 | MS.gene54717:CDS |
| TGTGGAAGATGTGGTGAGCT+TGG | 0.554813 | 6.1:+4085044 | MS.gene54717:CDS |
| GCTGATCATAAGTGTCATTA+CGG | 0.559180 | 6.1:+4083369 | MS.gene54717:CDS |
| ATCATAAGTGTCATTACGGT+GGG | 0.559472 | 6.1:+4083373 | MS.gene54717:CDS |
| TGAATCTTCACACTGCTACC+AGG | 0.559896 | 6.1:-4083633 | None:intergenic |
| TTGGGTGCAAGTGGTGCTTG+AGG | 0.562173 | 6.1:-4085237 | None:intergenic |
| CCTTCAGCTGCTACAAACTC+AGG | 0.562217 | 6.1:-4082844 | None:intergenic |
| CGAGGTGTGAGTTTCAGGAT+TGG | 0.562225 | 6.1:-4083441 | None:intergenic |
| TGATGCAAGATATGAGGATG+AGG | 0.563105 | 6.1:+4082780 | MS.gene54717:CDS |
| TGATGTAGGTAGTTGGTCTA+GGG | 0.564288 | 6.1:+4084275 | MS.gene54717:CDS |
| ACATGCTATGGTAAACAACT+TGG | 0.566425 | 6.1:+4085080 | MS.gene54717:CDS |
| GTGTGGTATGCTGTGGCTGG+AGG | 0.566649 | 6.1:+4082637 | MS.gene54717:CDS |
| CCTGAGTTTGTAGCAGCTGA+AGG | 0.567429 | 6.1:+4082844 | MS.gene54717:CDS |
| TGATTAACAAGCTGTTGGAT+AGG | 0.570723 | 6.1:+4084487 | MS.gene54717:CDS |
| ATGGTAAACAACTTGGTGAC+AGG | 0.571572 | 6.1:+4085087 | MS.gene54717:CDS |
| AAAGTGATGGGGATGTGCTA+AGG | 0.571680 | 6.1:+4082689 | MS.gene54717:CDS |
| CATAGCTGAGTATAAGGCTG+AGG | 0.572723 | 6.1:+4082714 | MS.gene54717:CDS |
| GCTGGAGGAGAACTCAAAGA+TGG | 0.577876 | 6.1:+4082652 | MS.gene54717:CDS |
| TGATCTTGATGCAAGATATG+AGG | 0.578326 | 6.1:+4082774 | MS.gene54717:CDS |
| ACGCTGAAACAAAGGACGCA+TGG | 0.578444 | 6.1:+4083859 | MS.gene54717:CDS |
| TGAACATTTGAAGTAACCAC+AGG | 0.580157 | 6.1:-4082976 | None:intergenic |
| GTTGTGGCTAAGTGTGCTGA+TGG | 0.582427 | 6.1:+4083279 | MS.gene54717:CDS |
| CCAGTATTGGTTGCAACAGG+TGG | 0.585794 | 6.1:-4085405 | None:intergenic |
| TAAGAAAAGTGATAGGAAGA+GGG | 0.586873 | 6.1:+4083257 | MS.gene54717:CDS |
| GGATAAAGGCTTGAATCGAA+TGG | 0.587954 | 6.1:+4081915 | MS.gene54717:CDS |
| TGACAGGATGCTTGCACCAG+GGG | 0.590664 | 6.1:+4085103 | MS.gene54717:CDS |
| AGGCAATGTGGAAAGCTGCT+AGG | 0.595180 | 6.1:+4084169 | MS.gene54717:CDS |
| CTTGCCACCATATGTTAGAA+GGG | 0.595352 | 6.1:+4084905 | MS.gene54717:CDS |
| GTGACAGGATGCTTGCACCA+GGG | 0.596778 | 6.1:+4085102 | MS.gene54717:CDS |
| GGCTGGTCTCCAAATTGGAG+TGG | 0.599060 | 6.1:+4084528 | MS.gene54717:CDS |
| GGCACATTGTTGCTTGCAAG+TGG | 0.604283 | 6.1:-4085465 | None:intergenic |
| AGTGATAAATCTTGAACCTG+TGG | 0.606675 | 6.1:+4082960 | MS.gene54717:CDS |
| GAGGATAAAGAAATTGAAGG+AGG | 0.607215 | 6.1:+4083467 | MS.gene54717:CDS |
| GGAGGCTTGTAAAGAAAGGT+GGG | 0.609114 | 6.1:+4083485 | MS.gene54717:CDS |
| TTCGGAGAAGATGAAGTGGG+TGG | 0.609860 | 6.1:+4081894 | None:intergenic |
| AAGTCTCTGGAACTTATCCA+TGG | 0.615263 | 6.1:+4083549 | MS.gene54717:CDS |
| AGGAGGCTTGTAAAGAAAGG+TGG | 0.615604 | 6.1:+4083484 | MS.gene54717:CDS |
| TATCATCTGCTCTTCTGATG+AGG | 0.620542 | 6.1:+4083089 | MS.gene54717:CDS |
| ATATACTGTGTGGTATGCTG+TGG | 0.623292 | 6.1:+4082630 | MS.gene54717:CDS |
| TCCACTTTCAGATTCAAAAG+GGG | 0.623534 | 6.1:-4082815 | None:intergenic |
| GTGAGCATGATGTAGGTAGT+TGG | 0.625649 | 6.1:+4084268 | MS.gene54717:CDS |
| CCTAACTTTGAATACAAAAG+GGG | 0.626197 | 6.1:+4082514 | MS.gene54717:CDS |
| GGTGCCCTTCTAACATATGG+TGG | 0.626501 | 6.1:-4084909 | None:intergenic |
| AGTGTAAAGATAGTGATGCT+GGG | 0.628640 | 6.1:+4083655 | MS.gene54717:CDS |
| TTTAAAGCCACAAATAGTGG+GGG | 0.629217 | 6.1:+4085581 | MS.gene54717:CDS |
| GTGAGCTTGGTCATAATGCT+AGG | 0.629928 | 6.1:+4085057 | MS.gene54717:CDS |
| AATCAACACAGTCTCAAGTG+TGG | 0.632912 | 6.1:+4085026 | MS.gene54717:CDS |
| TGAAAGAGTTAGTGAAGATG+GGG | 0.633656 | 6.1:+4082876 | MS.gene54717:CDS |
| ATACAATGGTTACTTTAGTG+GGG | 0.636397 | 6.1:+4082489 | MS.gene54717:CDS |
| AACTTAGAGACTATATGTTG+AGG | 0.636919 | 6.1:+4084442 | MS.gene54717:CDS |
| TAGGTGTAAGAAGGAAGCTG+AGG | 0.637007 | 6.1:+4084506 | MS.gene54717:CDS |
| TACAATGGTTGAATTTAACA+AGG | 0.637028 | 6.1:+4084197 | MS.gene54717:CDS |
| TTTCTGAAAGGAAGAGATGG+AGG | 0.643266 | 6.1:+4083768 | MS.gene54717:CDS |
| AGCTGCTAGGTGTACTACAA+TGG | 0.644005 | 6.1:+4084182 | MS.gene54717:CDS |
| AACAGGTGGAACACTTGTTG+TGG | 0.644252 | 6.1:-4085391 | None:intergenic |
| AGTCTCAAGTGTGGAAGATG+TGG | 0.644758 | 6.1:+4085035 | MS.gene54717:CDS |
| AATGACAGTGACTATGATGA+GGG | 0.646991 | 6.1:+4082907 | MS.gene54717:CDS |
| GAATGACAGTGACTATGATG+AGG | 0.652354 | 6.1:+4082906 | MS.gene54717:CDS |
| CTTGTTGTGGATGCAGCAGT+TGG | 0.653590 | 6.1:-4085378 | None:intergenic |
| AAGAGCAATTAAAAGTGATG+GGG | 0.654014 | 6.1:+4082678 | MS.gene54717:CDS |
| GATCATAAGTGTCATTACGG+TGG | 0.654602 | 6.1:+4083372 | MS.gene54717:CDS |
| GTGTTCAAGCAAGTTGATGG+TGG | 0.654916 | 6.1:-4085429 | None:intergenic |
| TCCAGGTGAGCAATTGAAGG+AGG | 0.660416 | 6.1:+4084149 | MS.gene54717:CDS |
| CATATGCAAGCAATTGCATG+TGG | 0.664766 | 6.1:-4084663 | None:intergenic |
| TGTGTGTTAAACATCTGTAT+GGG | 0.668791 | 6.1:+4084109 | MS.gene54717:CDS |
| AGGTGTAAGAAGGAAGCTGA+GGG | 0.668965 | 6.1:+4084507 | MS.gene54717:CDS |
| GGCTTGAATCGAATGGACCA+TGG | 0.670315 | 6.1:+4081922 | MS.gene54717:CDS |
| CTTATGAGTATGGAGGCACG+TGG | 0.673041 | 6.1:+4082542 | MS.gene54717:CDS |
| AATTTCTTTATCCTCATACG+AGG | 0.678356 | 6.1:-4083459 | None:intergenic |
| ATTGCTCATCTATGGCACCA+TGG | 0.678376 | 6.1:-4083566 | None:intergenic |
| AGCAATTGAAGGAGGCAATG+TGG | 0.678725 | 6.1:+4084157 | MS.gene54717:CDS |
| ATGGTGGCAAGATTGGTGGA+AGG | 0.679947 | 6.1:-4084893 | None:intergenic |
| ACAAGTAAACAACATGTGTG+AGG | 0.682325 | 6.1:+4084329 | MS.gene54717:CDS |
| GGTGATACTTATGAGTATGG+AGG | 0.687282 | 6.1:+4082535 | MS.gene54717:CDS |
| ATTGGTGGAAGGTCAAGTTG+TGG | 0.698009 | 6.1:-4084882 | None:intergenic |
| ACTATGCTGAGGAATTGTTG+AGG | 0.698262 | 6.1:+4083604 | MS.gene54717:CDS |
| GCATCTGAGAAACTATGCTG+AGG | 0.703280 | 6.1:+4083593 | MS.gene54717:CDS |
| CTACTAAGAACCACTCAGTG+AGG | 0.703377 | 6.1:+4082455 | MS.gene54717:CDS |
| GACGAGCAGAGCTTTCACCA+TGG | 0.711365 | 6.1:-4081939 | None:intergenic |
| TAAACCTTATCCTCACTGAG+TGG | 0.713054 | 6.1:-4082465 | None:intergenic |
| TCTGATGAGGATACTGACCG+TGG | 0.724939 | 6.1:+4083102 | MS.gene54717:CDS |
| TTATGAGTATGGAGGCACGT+GGG | 0.759191 | 6.1:+4082543 | MS.gene54717:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAACTTGAAATTATAT+AGG | + | chr6.1:4084796-4084815 | MS.gene54717:intron | 10.0% |
| !!! | ATATTGTTTTATTTATTTGA+AGG | + | chr6.1:4084038-4084057 | MS.gene54717:intron | 10.0% |
| !!! | TATTGTTTTATTTATTTGAA+GGG | + | chr6.1:4084039-4084058 | MS.gene54717:intron | 10.0% |
| !!! | ACAATAATAATGTCATTTAA+GGG | + | chr6.1:4082395-4082414 | MS.gene54717:intron | 15.0% |
| !!! | TACAATAATAATGTCATTTA+AGG | + | chr6.1:4082394-4082413 | MS.gene54717:intron | 15.0% |
| !! | ATTATATAACACATTAGCAA+AGG | + | chr6.1:4084767-4084786 | MS.gene54717:intron | 20.0% |
| !! | TGCATATAATATTGTAACTT+GGG | + | chr6.1:4082140-4082159 | MS.gene54717:intron | 20.0% |
| !! | TTATATAACACATTAGCAAA+GGG | + | chr6.1:4084768-4084787 | MS.gene54717:intron | 20.0% |
| !! | TTTATGTTAAGAAAAGTGAT+AGG | + | chr6.1:4083250-4083269 | MS.gene54717:CDS | 20.0% |
| !!! | AAGAAATTGTTTTTGTGAAA+GGG | + | chr6.1:4083157-4083176 | MS.gene54717:CDS | 20.0% |
| !!! | AAGTATGTTGTTTGAATTTA+GGG | + | chr6.1:4082188-4082207 | MS.gene54717:intron | 20.0% |
| !!! | ATATAGGAAATCTACTTTTT+TGG | + | chr6.1:4084812-4084831 | MS.gene54717:intron | 20.0% |
| !!! | CAATAATAATGTCATTTAAG+GGG | + | chr6.1:4082396-4082415 | MS.gene54717:intron | 20.0% |
| !!! | GTTAAAACAAAGTATGTTTT+AGG | - | chr6.1:4083339-4083358 | None:intergenic | 20.0% |
| ! | AAGTAGCTATCAGTTATATA+GGG | + | chr6.1:4083518-4083537 | MS.gene54717:CDS | 25.0% |
| ! | ATCCTAACTTTGAATACAAA+AGG | + | chr6.1:4082512-4082531 | MS.gene54717:CDS | 25.0% |
| ! | CCTAAAAAACAAAGGAAAAA+AGG | + | chr6.1:4084939-4084958 | MS.gene54717:CDS | 25.0% |
| ! | CTGCATATAATATTGTAACT+TGG | + | chr6.1:4082139-4082158 | MS.gene54717:intron | 25.0% |
| ! | GCTAGATTTACAGTTTATAA+AGG | + | chr6.1:4084564-4084583 | MS.gene54717:CDS | 25.0% |
| ! | TAAGAGCAATTAAAAGTGAT+GGG | + | chr6.1:4082677-4082696 | MS.gene54717:CDS | 25.0% |
| ! | TAAGTAGCTATCAGTTATAT+AGG | + | chr6.1:4083517-4083536 | MS.gene54717:CDS | 25.0% |
| ! | TACAATGGTTGAATTTAACA+AGG | + | chr6.1:4084197-4084216 | MS.gene54717:CDS | 25.0% |
| ! | TATGAGGATAAAGAAATTGA+AGG | + | chr6.1:4083464-4083483 | MS.gene54717:CDS | 25.0% |
| ! | TCCTAACTTTGAATACAAAA+GGG | + | chr6.1:4082513-4082532 | MS.gene54717:CDS | 25.0% |
| ! | TGAAAATGTATATCACAGAT+AGG | + | chr6.1:4084412-4084431 | MS.gene54717:CDS | 25.0% |
| ! | TTTGTCTTTGCTTGAATATT+CGG | + | chr6.1:4082011-4082030 | MS.gene54717:intron | 25.0% |
| ! | TTTGTCTTTGCTTGAATATT+GGG | + | chr6.1:4082011-4082030 | MS.gene54717:intron | 25.0% |
| !! | ACATATATTCTCTGAAAAAC+AGG | - | chr6.1:4083681-4083700 | None:intergenic | 25.0% |
| !! | GAAGTATGTTGTTTGAATTT+AGG | + | chr6.1:4082187-4082206 | MS.gene54717:intron | 25.0% |
| !! | TATGTAATTTTGTCTTACCA+CGG | - | chr6.1:4083122-4083141 | None:intergenic | 25.0% |
| !! | TTTTGTCTTTGCTTGAATAT+TGG | + | chr6.1:4082010-4082029 | MS.gene54717:intron | 25.0% |
| !!! | AAAACAAAGTATGTTTTAGG+TGG | - | chr6.1:4083336-4083355 | None:intergenic | 25.0% |
| !!! | AATTTTAAAGCCACAAATAG+TGG | + | chr6.1:4085578-4085597 | MS.gene54717:CDS | 25.0% |
| !!! | ACTATTTGTGGCTTTAAAAT+TGG | - | chr6.1:4085579-4085598 | None:intergenic | 25.0% |
| !!! | ATTTTAAAGCCACAAATAGT+GGG | + | chr6.1:4085579-4085598 | MS.gene54717:CDS | 25.0% |
| !!! | CCTTTTTTCCTTTGTTTTTT+AGG | - | chr6.1:4084942-4084961 | None:intergenic | 25.0% |
| !!! | GAAGAAATTGTTTTTGTGAA+AGG | + | chr6.1:4083156-4083175 | MS.gene54717:CDS | 25.0% |
| !!! | TTATACTACTGATTTTGGTA+TGG | + | chr6.1:4082354-4082373 | MS.gene54717:intron | 25.0% |
| AACTTAGAGACTATATGTTG+AGG | + | chr6.1:4084442-4084461 | MS.gene54717:CDS | 30.0% | |
| AAGAGCAATTAAAAGTGATG+GGG | + | chr6.1:4082678-4082697 | MS.gene54717:CDS | 30.0% | |
| AATCTTGGAGAAAAATCTTG+TGG | + | chr6.1:4084606-4084625 | MS.gene54717:CDS | 30.0% | |
| AATTTCTTTATCCTCATACG+AGG | - | chr6.1:4083462-4083481 | None:intergenic | 30.0% | |
| ACTACTTGTAGACCATTAAT+TGG | + | chr6.1:4083732-4083751 | MS.gene54717:CDS | 30.0% | |
| AGGATAAGGTTTAGATACAA+TGG | + | chr6.1:4082475-4082494 | MS.gene54717:CDS | 30.0% | |
| CAAAAACGAATCTTACTTTG+AGG | - | chr6.1:4081995-4082014 | None:intergenic | 30.0% | |
| CCTAACTTTGAATACAAAAG+GGG | + | chr6.1:4082514-4082533 | MS.gene54717:CDS | 30.0% | |
| CTAAGAGCAATTAAAAGTGA+TGG | + | chr6.1:4082676-4082695 | MS.gene54717:CDS | 30.0% | |
| CTGTTATATCTCTTGTTGAT+GGG | + | chr6.1:4084388-4084407 | MS.gene54717:CDS | 30.0% | |
| GAAAAAAGGTAATGATGAGA+AGG | + | chr6.1:4084953-4084972 | MS.gene54717:CDS | 30.0% | |
| TAAGAAAAGTGATAGGAAGA+GGG | + | chr6.1:4083257-4083276 | MS.gene54717:CDS | 30.0% | |
| TACTTCAAATGTTCAAGCTT+TGG | + | chr6.1:4082984-4083003 | MS.gene54717:CDS | 30.0% | |
| TCAAGATTTATCACTTGATC+AGG | - | chr6.1:4082955-4082974 | None:intergenic | 30.0% | |
| TGCTAAACCTCATGTAAAAT+GGG | - | chr6.1:4083308-4083327 | None:intergenic | 30.0% | |
| TGTGTGTTAAACATCTGTAT+GGG | + | chr6.1:4084109-4084128 | MS.gene54717:CDS | 30.0% | |
| TTAAGAAAAGTGATAGGAAG+AGG | + | chr6.1:4083256-4083275 | MS.gene54717:CDS | 30.0% | |
| TTATTATCTCCACTCCAATT+TGG | - | chr6.1:4084540-4084559 | None:intergenic | 30.0% | |
| TTCACATAACACAACCAAAA+AGG | - | chr6.1:4082170-4082189 | None:intergenic | 30.0% | |
| TTCCACTTTCAGATTCAAAA+GGG | - | chr6.1:4082819-4082838 | None:intergenic | 30.0% | |
| TTGCTAAACCTCATGTAAAA+TGG | - | chr6.1:4083309-4083328 | None:intergenic | 30.0% | |
| TTGTGTGTTAAACATCTGTA+TGG | + | chr6.1:4084108-4084127 | MS.gene54717:CDS | 30.0% | |
| ! | AGATACAATGGTTACTTTAG+TGG | + | chr6.1:4082487-4082506 | MS.gene54717:CDS | 30.0% |
| ! | ATACAATGGTTACTTTAGTG+GGG | + | chr6.1:4082489-4082508 | MS.gene54717:CDS | 30.0% |
| ! | ATTTTACATGAGGTTTAGCA+AGG | + | chr6.1:4083308-4083327 | MS.gene54717:CDS | 30.0% |
| ! | GATACAATGGTTACTTTAGT+GGG | + | chr6.1:4082488-4082507 | MS.gene54717:CDS | 30.0% |
| !! | CATAATTTTGGTCCATTACA+AGG | - | chr6.1:4084861-4084880 | None:intergenic | 30.0% |
| !! | CTTGTAATGGACCAAAATTA+TGG | + | chr6.1:4084859-4084878 | MS.gene54717:CDS | 30.0% |
| !!! | AGACTGTGTTGATTTCTTTT+GGG | - | chr6.1:4085020-4085039 | None:intergenic | 30.0% |
| !!! | GAAGATTTTGATGATGAGAA+TGG | + | chr6.1:4083048-4083067 | MS.gene54717:CDS | 30.0% |
| !!! | GAATATTCGGTTGTCTTTTT+TGG | + | chr6.1:4082099-4082118 | MS.gene54717:intron | 30.0% |
| !!! | GAATATTGGGTTGTCTTTTT+TGG | + | chr6.1:4082024-4082043 | MS.gene54717:intron | 30.0% |
| !!! | TGCTGTTATACTACTGATTT+TGG | + | chr6.1:4082349-4082368 | MS.gene54717:intron | 30.0% |
| !!! | TTTTAAAGCCACAAATAGTG+GGG | + | chr6.1:4085580-4085599 | MS.gene54717:CDS | 30.0% |
| AAGGTTCATAGCTGAGTATA+AGG | + | chr6.1:4082708-4082727 | MS.gene54717:CDS | 35.0% | |
| AATGACAGTGACTATGATGA+GGG | + | chr6.1:4082907-4082926 | MS.gene54717:CDS | 35.0% | |
| ACAAGTAAACAACATGTGTG+AGG | + | chr6.1:4084329-4084348 | MS.gene54717:CDS | 35.0% | |
| ACATGCTATGGTAAACAACT+TGG | + | chr6.1:4085080-4085099 | MS.gene54717:CDS | 35.0% | |
| AGAACATTAATGAAGCTGCT+TGG | + | chr6.1:4084235-4084254 | MS.gene54717:CDS | 35.0% | |
| AGTGATAAATCTTGAACCTG+TGG | + | chr6.1:4082960-4082979 | MS.gene54717:CDS | 35.0% | |
| AGTGTAAAGATAGTGATGCT+GGG | + | chr6.1:4083655-4083674 | MS.gene54717:CDS | 35.0% | |
| ATGGCATTGCAGCTAAAAAA+TGG | + | chr6.1:4083916-4083935 | MS.gene54717:CDS | 35.0% | |
| CTGAAAGAGTTAGTGAAGAT+GGG | + | chr6.1:4082875-4082894 | MS.gene54717:CDS | 35.0% | |
| CTGGTTTCTTGAACTGTTAT+TGG | + | chr6.1:4083884-4083903 | MS.gene54717:CDS | 35.0% | |
| GAAAAATCCAGATGACTATG+TGG | + | chr6.1:4084695-4084714 | MS.gene54717:CDS | 35.0% | |
| GAAGAGAAAGTCTGATGAAA+TGG | + | chr6.1:4085647-4085666 | MS.gene54717:CDS | 35.0% | |
| GAATCTTGCTTTGTACTTTG+AGG | - | chr6.1:4082063-4082082 | None:intergenic | 35.0% | |
| GACATTTACTAGCAGCAATT+GGG | + | chr6.1:4083790-4083809 | MS.gene54717:CDS | 35.0% | |
| GACTATATGTTGAGGTATGA+TGG | + | chr6.1:4084450-4084469 | MS.gene54717:CDS | 35.0% | |
| GACTCATATGCTGTTAATCT+TGG | + | chr6.1:4084591-4084610 | MS.gene54717:CDS | 35.0% | |
| GAGGATAAAGAAATTGAAGG+AGG | + | chr6.1:4083467-4083486 | MS.gene54717:CDS | 35.0% | |
| GCTGTTATATCTCTTGTTGA+TGG | + | chr6.1:4084387-4084406 | MS.gene54717:CDS | 35.0% | |
| GGTTGAATTTAACAAGGCAA+TGG | + | chr6.1:4084203-4084222 | MS.gene54717:CDS | 35.0% | |
| GTTCCACTTTCAGATTCAAA+AGG | - | chr6.1:4082820-4082839 | None:intergenic | 35.0% | |
| TCCAATGATTAACAAGCTGT+TGG | + | chr6.1:4084482-4084501 | MS.gene54717:CDS | 35.0% | |
| TCCACTTTCAGATTCAAAAG+GGG | - | chr6.1:4082818-4082837 | None:intergenic | 35.0% | |
| TCTGAAAGAGTTAGTGAAGA+TGG | + | chr6.1:4082874-4082893 | MS.gene54717:CDS | 35.0% | |
| TGAAAGAGTTAGTGAAGATG+GGG | + | chr6.1:4082876-4082895 | MS.gene54717:CDS | 35.0% | |
| TGAAGTTAACCTAGTTGACT+TGG | + | chr6.1:4082573-4082592 | MS.gene54717:CDS | 35.0% | |
| TGATCTTGATGCAAGATATG+AGG | + | chr6.1:4082774-4082793 | MS.gene54717:CDS | 35.0% | |
| TGATTAACAAGCTGTTGGAT+AGG | + | chr6.1:4084487-4084506 | MS.gene54717:CDS | 35.0% | |
| TTCAGATTCAAAAGGGGAAT+AGG | - | chr6.1:4082812-4082831 | None:intergenic | 35.0% | |
| TTTCATTTCAGACCAGCAAA+AGG | + | chr6.1:4083941-4083960 | MS.gene54717:CDS | 35.0% | |
| ! | AACAAATGCATACCTTTTGC+TGG | - | chr6.1:4083956-4083975 | None:intergenic | 35.0% |
| ! | AACTTTAAGAAGAGACATCC+AGG | + | chr6.1:4084132-4084151 | MS.gene54717:CDS | 35.0% |
| ! | AGACCATTAATTGGTCTAGA+TGG | + | chr6.1:4083741-4083760 | MS.gene54717:CDS | 35.0% |
| ! | ATCATAAGTGTCATTACGGT+GGG | + | chr6.1:4083373-4083392 | MS.gene54717:CDS | 35.0% |
| ! | CCCCTTTTGTATTCAAAGTT+AGG | - | chr6.1:4082517-4082536 | None:intergenic | 35.0% |
| ! | GACCATTAATTGGTCTAGAT+GGG | + | chr6.1:4083742-4083761 | MS.gene54717:CDS | 35.0% |
| ! | GCTGATCATAAGTGTCATTA+CGG | + | chr6.1:4083369-4083388 | MS.gene54717:CDS | 35.0% |
| ! | GGATAGTGTGACTTTTTACT+TGG | + | chr6.1:4082735-4082754 | MS.gene54717:CDS | 35.0% |
| ! | TGAACATTTGAAGTAACCAC+AGG | - | chr6.1:4082979-4082998 | None:intergenic | 35.0% |
| ! | TTCAAATGTTCAAGCTTTGG+TGG | + | chr6.1:4082987-4083006 | MS.gene54717:CDS | 35.0% |
| ! | TTTAAAGCCACAAATAGTGG+GGG | + | chr6.1:4085581-4085600 | MS.gene54717:CDS | 35.0% |
| !! | TCAAGTTGTGGCCATAATTT+TGG | - | chr6.1:4084873-4084892 | None:intergenic | 35.0% |
| !! | TCCAACAGCTTGTTAATCAT+TGG | - | chr6.1:4084486-4084505 | None:intergenic | 35.0% |
| !! | TCTCAAGTGCTGAACTAATT+AGG | + | chr6.1:4083187-4083206 | MS.gene54717:CDS | 35.0% |
| !! | TGTTTTCTGAAAGGAAGAGA+TGG | + | chr6.1:4083765-4083784 | MS.gene54717:CDS | 35.0% |
| !!! | ACTACTGATTTTGGTATGGT+TGG | + | chr6.1:4082358-4082377 | MS.gene54717:intron | 35.0% |
| !!! | GAGACTGTGTTGATTTCTTT+TGG | - | chr6.1:4085021-4085040 | None:intergenic | 35.0% |
| AAACAGTCTCAATCTAGTGC+TGG | + | chr6.1:4084978-4084997 | MS.gene54717:CDS | 40.0% | |
| AACCTCATACTGCCTTGTAA+TGG | + | chr6.1:4084846-4084865 | MS.gene54717:CDS | 40.0% | |
| AATCAACACAGTCTCAAGTG+TGG | + | chr6.1:4085026-4085045 | MS.gene54717:CDS | 40.0% | |
| ACCAATTGCATTTGCAGTAG+TGG | + | chr6.1:4083836-4083855 | MS.gene54717:CDS | 40.0% | |
| ACTATGCTGAGGAATTGTTG+AGG | + | chr6.1:4083604-4083623 | MS.gene54717:CDS | 40.0% | |
| ACTGACTGTTGTGTTCCAAT+AGG | - | chr6.1:4085675-4085694 | None:intergenic | 40.0% | |
| AGGGGTGATACTTATGAGTA+TGG | + | chr6.1:4082532-4082551 | MS.gene54717:CDS | 40.0% | |
| AGTGAGAGAGTTAGGTGTAA+AGG | + | chr6.1:4082603-4082622 | MS.gene54717:CDS | 40.0% | |
| AGTTGCTCACAGTCTTCTTT+GGG | - | chr6.1:4085521-4085540 | None:intergenic | 40.0% | |
| ATATACTGTGTGGTATGCTG+TGG | + | chr6.1:4082630-4082649 | MS.gene54717:CDS | 40.0% | |
| ATCTTCAAGTCTTGCTGCAT+CGG | - | chr6.1:4083034-4083053 | None:intergenic | 40.0% | |
| ATGCGCATATTGCTCATCTA+TGG | - | chr6.1:4083577-4083596 | None:intergenic | 40.0% | |
| CACATGCAATTGCTTGCATA+TGG | + | chr6.1:4084664-4084683 | MS.gene54717:CDS | 40.0% | |
| CACCCATCTAGACCAATTAA+TGG | - | chr6.1:4083747-4083766 | None:intergenic | 40.0% | |
| CAGTGTAAAGATAGTGATGC+TGG | + | chr6.1:4083654-4083673 | MS.gene54717:CDS | 40.0% | |
| CATAATGCTAGGACATGCTA+TGG | + | chr6.1:4085068-4085087 | MS.gene54717:CDS | 40.0% | |
| CATATGCAAGCAATTGCATG+TGG | - | chr6.1:4084666-4084685 | None:intergenic | 40.0% | |
| CATTAATGAAGCTGCTTGGA+AGG | + | chr6.1:4084239-4084258 | MS.gene54717:CDS | 40.0% | |
| CTAACATATGGTGGCAAGAT+TGG | - | chr6.1:4084903-4084922 | None:intergenic | 40.0% | |
| CTTGCCACCATATGTTAGAA+GGG | + | chr6.1:4084905-4084924 | MS.gene54717:CDS | 40.0% | |
| GAAAAGCTAGTGAGAGAGTT+AGG | + | chr6.1:4082595-4082614 | MS.gene54717:CDS | 40.0% | |
| GAATGACAGTGACTATGATG+AGG | + | chr6.1:4082906-4082925 | MS.gene54717:CDS | 40.0% | |
| GGACATTTACTAGCAGCAAT+TGG | + | chr6.1:4083789-4083808 | MS.gene54717:CDS | 40.0% | |
| GGATAAAGGCTTGAATCGAA+TGG | + | chr6.1:4081915-4081934 | MS.gene54717:CDS | 40.0% | |
| GGTGATACTTATGAGTATGG+AGG | + | chr6.1:4082535-4082554 | MS.gene54717:CDS | 40.0% | |
| GTGAGAGAGTTAGGTGTAAA+GGG | + | chr6.1:4082604-4082623 | MS.gene54717:CDS | 40.0% | |
| TAAACCTTATCCTCACTGAG+TGG | - | chr6.1:4082468-4082487 | None:intergenic | 40.0% | |
| TAAAGGGGGAATATACTGTG+TGG | + | chr6.1:4082620-4082639 | MS.gene54717:CDS | 40.0% | |
| TATCATCTGCTCTTCTGATG+AGG | + | chr6.1:4083089-4083108 | MS.gene54717:CDS | 40.0% | |
| TCCACTACTGCAAATGCAAT+TGG | - | chr6.1:4083840-4083859 | None:intergenic | 40.0% | |
| TCTGATGAAATGGAGCCTAT+TGG | + | chr6.1:4085657-4085676 | MS.gene54717:CDS | 40.0% | |
| TCTTGCCACCATATGTTAGA+AGG | + | chr6.1:4084904-4084923 | MS.gene54717:CDS | 40.0% | |
| TGAAGGAGGCTTGTAAAGAA+AGG | + | chr6.1:4083481-4083500 | MS.gene54717:CDS | 40.0% | |
| TGAGAGAGTTAGGTGTAAAG+GGG | + | chr6.1:4082605-4082624 | MS.gene54717:CDS | 40.0% | |
| TGATGCAAGATATGAGGATG+AGG | + | chr6.1:4082780-4082799 | MS.gene54717:CDS | 40.0% | |
| ! | ACAGTGTTCAAGCAAGTTGA+TGG | - | chr6.1:4085435-4085454 | None:intergenic | 40.0% |
| ! | AGTCTTCTTTGGGTCAGTTT+TGG | - | chr6.1:4085511-4085530 | None:intergenic | 40.0% |
| ! | ATGATGTAGGTAGTTGGTCT+AGG | + | chr6.1:4084274-4084293 | MS.gene54717:CDS | 40.0% |
| ! | ATGGTAAACAACTTGGTGAC+AGG | + | chr6.1:4085087-4085106 | MS.gene54717:CDS | 40.0% |
| ! | ATGGTTGCCCATTTTACATG+AGG | + | chr6.1:4083298-4083317 | MS.gene54717:CDS | 40.0% |
| ! | ATGTTTTCCCCCACTATTTG+TGG | - | chr6.1:4085591-4085610 | None:intergenic | 40.0% |
| ! | CTAGATGGGTGTTTTCTGAA+AGG | + | chr6.1:4083756-4083775 | MS.gene54717:CDS | 40.0% |
| ! | GATCATAAGTGTCATTACGG+TGG | + | chr6.1:4083372-4083391 | MS.gene54717:CDS | 40.0% |
| ! | GTGCTTTTATGCTTGCAAGA+GGG | + | chr6.1:4083701-4083720 | MS.gene54717:CDS | 40.0% |
| ! | TCCCCTTTTGAATCTGAAAG+TGG | + | chr6.1:4082814-4082833 | MS.gene54717:CDS | 40.0% |
| ! | TGATGTAGGTAGTTGGTCTA+GGG | + | chr6.1:4084275-4084294 | MS.gene54717:CDS | 40.0% |
| ! | TGTGCTTTTATGCTTGCAAG+AGG | + | chr6.1:4083700-4083719 | MS.gene54717:CDS | 40.0% |
| ! | TTTCTGAAAGGAAGAGATGG+AGG | + | chr6.1:4083768-4083787 | MS.gene54717:CDS | 40.0% |
| !! | AAGTCTCTGGAACTTATCCA+TGG | + | chr6.1:4083549-4083568 | MS.gene54717:CDS | 40.0% |
| !! | CTAGCTTTTCCAAGTCAACT+AGG | - | chr6.1:4082585-4082604 | None:intergenic | 40.0% |
| !! | CTGTTATTGGCTGACTTGAA+TGG | + | chr6.1:4083897-4083916 | MS.gene54717:CDS | 40.0% |
| !! | GAAGAAAGCACCAAGCAAAA+AGG | + | chr6.1:4085278-4085297 | MS.gene54717:CDS | 40.0% |
| !! | TACTTTGAGGCATTGTTGTC+AGG | - | chr6.1:4081982-4082001 | None:intergenic | 40.0% |
| AAGCACCAAGCAAAAAGGCT+GGG | + | chr6.1:4085283-4085302 | MS.gene54717:CDS | 45.0% | |
| AAGTGATAGGAAGAGGGTTG+TGG | + | chr6.1:4083263-4083282 | MS.gene54717:CDS | 45.0% | |
| AATCTGTGCTCATGAGCATC+AGG | - | chr6.1:4084090-4084109 | None:intergenic | 45.0% | |
| AATCTTGTGGCTGCAGGAAA+TGG | + | chr6.1:4084619-4084638 | MS.gene54717:CDS | 45.0% | |
| ACATATGGTGGCAAGATTGG+TGG | - | chr6.1:4084900-4084919 | None:intergenic | 45.0% | |
| ACATCCAGGTGAGCAATTGA+AGG | + | chr6.1:4084146-4084165 | MS.gene54717:CDS | 45.0% | |
| ACTATGTGGCTCATTGGTAC+AGG | + | chr6.1:4084709-4084728 | MS.gene54717:CDS | 45.0% | |
| AGAACCACTCAGTGAGGATA+AGG | + | chr6.1:4082461-4082480 | MS.gene54717:CDS | 45.0% | |
| AGCAATTGAAGGAGGCAATG+TGG | + | chr6.1:4084157-4084176 | MS.gene54717:CDS | 45.0% | |
| AGCTGCTAGGTGTACTACAA+TGG | + | chr6.1:4084182-4084201 | MS.gene54717:CDS | 45.0% | |
| AGGAGGCTTGTAAAGAAAGG+TGG | + | chr6.1:4083484-4083503 | MS.gene54717:CDS | 45.0% | |
| AGGTGTAAGAAGGAAGCTGA+GGG | + | chr6.1:4084507-4084526 | MS.gene54717:CDS | 45.0% | |
| AGGTTGCTGAACAGTTGGAT+TGG | - | chr6.1:4085220-4085239 | None:intergenic | 45.0% | |
| AGTCTCAAGTGTGGAAGATG+TGG | + | chr6.1:4085035-4085054 | MS.gene54717:CDS | 45.0% | |
| AGTGGGGGAAAACATACTCA+TGG | + | chr6.1:4085596-4085615 | MS.gene54717:CDS | 45.0% | |
| ATCTTGTGGCTGCAGGAAAT+GGG | + | chr6.1:4084620-4084639 | MS.gene54717:CDS | 45.0% | |
| ATTGCTCATCTATGGCACCA+TGG | - | chr6.1:4083569-4083588 | None:intergenic | 45.0% | |
| CAAGCAATTGCATGTGGACA+AGG | - | chr6.1:4084660-4084679 | None:intergenic | 45.0% | |
| CAATGAGCCACATAGTCATC+TGG | - | chr6.1:4084705-4084724 | None:intergenic | 45.0% | |
| CACTTGCACCCAAGAAGAAA+GGG | + | chr6.1:4085247-4085266 | MS.gene54717:CDS | 45.0% | |
| CAGATGACTATGTGGCTCAT+TGG | + | chr6.1:4084703-4084722 | MS.gene54717:CDS | 45.0% | |
| CAGGCAGGCCTAAAAAACAA+AGG | + | chr6.1:4084931-4084950 | MS.gene54717:CDS | 45.0% | |
| CATAGCTGAGTATAAGGCTG+AGG | + | chr6.1:4082714-4082733 | MS.gene54717:CDS | 45.0% | |
| CCAATGTTCCTGCACTTCTT+AGG | - | chr6.1:4085624-4085643 | None:intergenic | 45.0% | |
| CTACTAAGAACCACTCAGTG+AGG | + | chr6.1:4082455-4082474 | MS.gene54717:CDS | 45.0% | |
| CTAGCAGCAATTGGGAAAGA+TGG | + | chr6.1:4083798-4083817 | MS.gene54717:CDS | 45.0% | |
| GAATTGTTGAGGAGCAATCC+TGG | + | chr6.1:4083615-4083634 | MS.gene54717:CDS | 45.0% | |
| GAGAAAAATCTTGTGGCTGC+AGG | + | chr6.1:4084613-4084632 | MS.gene54717:CDS | 45.0% | |
| GAGAGAGTTAGGTGTAAAGG+GGG | + | chr6.1:4082606-4082625 | MS.gene54717:CDS | 45.0% | |
| GAGATGAGTGAGCATGATGT+AGG | + | chr6.1:4084261-4084280 | MS.gene54717:CDS | 45.0% | |
| GAGTTGCTCACAGTCTTCTT+TGG | - | chr6.1:4085522-4085541 | None:intergenic | 45.0% | |
| GATGCTTCTGTTGTGGTTGA+AGG | - | chr6.1:4085339-4085358 | None:intergenic | 45.0% | |
| GCATCTGAGAAACTATGCTG+AGG | + | chr6.1:4083593-4083612 | MS.gene54717:CDS | 45.0% | |
| GCTGTTGGATAGGTGTAAGA+AGG | + | chr6.1:4084497-4084516 | MS.gene54717:CDS | 45.0% | |
| GGAGGCTTGTAAAGAAAGGT+GGG | + | chr6.1:4083485-4083504 | MS.gene54717:CDS | 45.0% | |
| GTCCATTACAAGGCAGTATG+AGG | - | chr6.1:4084851-4084870 | None:intergenic | 45.0% | |
| GTGAGCATGATGTAGGTAGT+TGG | + | chr6.1:4084268-4084287 | MS.gene54717:CDS | 45.0% | |
| GTGAGCTTGGTCATAATGCT+AGG | + | chr6.1:4085057-4085076 | MS.gene54717:CDS | 45.0% | |
| TAGGGCTAAGAAGAAGTCTC+TGG | + | chr6.1:4083536-4083555 | MS.gene54717:CDS | 45.0% | |
| TAGGTGTAAGAAGGAAGCTG+AGG | + | chr6.1:4084506-4084525 | MS.gene54717:CDS | 45.0% | |
| TCATACGAGGTGTGAGTTTC+AGG | - | chr6.1:4083449-4083468 | None:intergenic | 45.0% | |
| TCTTCAAGTCTTGCTGCATC+GGG | - | chr6.1:4083033-4083052 | None:intergenic | 45.0% | |
| TGAAACTCACACCTCGTATG+AGG | + | chr6.1:4083448-4083467 | MS.gene54717:CDS | 45.0% | |
| TGAATCTTCACACTGCTACC+AGG | - | chr6.1:4083636-4083655 | None:intergenic | 45.0% | |
| TTAGCTGGCCCTTTCTTCTT+GGG | - | chr6.1:4085258-4085277 | None:intergenic | 45.0% | |
| ! | AAAGCACCAAGCAAAAAGGC+TGG | + | chr6.1:4085282-4085301 | MS.gene54717:CDS | 45.0% |
| ! | AAAGTGATGGGGATGTGCTA+AGG | + | chr6.1:4082689-4082708 | MS.gene54717:CDS | 45.0% |
| ! | AACAGGTGGAACACTTGTTG+TGG | - | chr6.1:4085394-4085413 | None:intergenic | 45.0% |
| ! | ACTATGATGAGGGCTTTGAC+TGG | + | chr6.1:4082917-4082936 | MS.gene54717:CDS | 45.0% |
| ! | ATTGGTGGAAGGTCAAGTTG+TGG | - | chr6.1:4084885-4084904 | None:intergenic | 45.0% |
| ! | CCTAAGAAGTGCAGGAACAT+TGG | + | chr6.1:4085621-4085640 | MS.gene54717:CDS | 45.0% |
| ! | GTAACTTGGGTCGTCCTTTT+TGG | + | chr6.1:4082153-4082172 | MS.gene54717:intron | 45.0% |
| ! | TCTGTTGTGGTTGAAGGTGT+TGG | - | chr6.1:4085333-4085352 | None:intergenic | 45.0% |
| ! | TTATGAGTATGGAGGCACGT+GGG | + | chr6.1:4082543-4082562 | MS.gene54717:CDS | 45.0% |
| !! | AGTAGTGGACGCTGAAACAA+AGG | + | chr6.1:4083851-4083870 | MS.gene54717:CDS | 45.0% |
| !! | AGTTGATGGTGGTCCAGTAT+TGG | - | chr6.1:4085421-4085440 | None:intergenic | 45.0% |
| !! | CTTGGTGCTTTCTTCTTAGC+TGG | - | chr6.1:4085273-4085292 | None:intergenic | 45.0% |
| !! | GTGTTCAAGCAAGTTGATGG+TGG | - | chr6.1:4085432-4085451 | None:intergenic | 45.0% |
| !!! | CTTTGTTTTTTAGGCCTGCC+TGG | - | chr6.1:4084933-4084952 | None:intergenic | 45.0% |
| AAACAAAGGACGCATGGGAC+TGG | + | chr6.1:4083865-4083884 | MS.gene54717:CDS | 50.0% | |
| ACGCTGAAACAAAGGACGCA+TGG | + | chr6.1:4083859-4083878 | MS.gene54717:CDS | 50.0% | |
| AGGCAATGTGGAAAGCTGCT+AGG | + | chr6.1:4084169-4084188 | MS.gene54717:CDS | 50.0% | |
| ATGGTGGCAAGATTGGTGGA+AGG | - | chr6.1:4084896-4084915 | None:intergenic | 50.0% | |
| CCACCTGTTGCAACCAATAC+TGG | + | chr6.1:4085405-4085424 | MS.gene54717:CDS | 50.0% | |
| CCACTTGCACCCAAGAAGAA+AGG | + | chr6.1:4085246-4085265 | MS.gene54717:CDS | 50.0% | |
| CCTGAGTTTGTAGCAGCTGA+AGG | + | chr6.1:4082844-4082863 | MS.gene54717:CDS | 50.0% | |
| CCTGGTGCCCTTCTAACATA+TGG | - | chr6.1:4084915-4084934 | None:intergenic | 50.0% | |
| CCTTCAGCTGCTACAAACTC+AGG | - | chr6.1:4082847-4082866 | None:intergenic | 50.0% | |
| CCTTTCTTCTTGGGTGCAAG+TGG | - | chr6.1:4085249-4085268 | None:intergenic | 50.0% | |
| CGAGGTGTGAGTTTCAGGAT+TGG | - | chr6.1:4083444-4083463 | None:intergenic | 50.0% | |
| CGCTGAAACAAAGGACGCAT+GGG | + | chr6.1:4083860-4083879 | MS.gene54717:CDS | 50.0% | |
| CTTAGCTGGCCCTTTCTTCT+TGG | - | chr6.1:4085259-4085278 | None:intergenic | 50.0% | |
| GCAGTTGTGGTTGCAGTTGA+TGG | - | chr6.1:4085309-4085328 | None:intergenic | 50.0% | |
| GCTGGAGGAGAACTCAAAGA+TGG | + | chr6.1:4082652-4082671 | MS.gene54717:CDS | 50.0% | |
| GCTTGAGGTTGCTGAACAGT+TGG | - | chr6.1:4085225-4085244 | None:intergenic | 50.0% | |
| GGCTTGAATCGAATGGACCA+TGG | + | chr6.1:4081922-4081941 | MS.gene54717:CDS | 50.0% | |
| GGTGCCCTTCTAACATATGG+TGG | - | chr6.1:4084912-4084931 | None:intergenic | 50.0% | |
| GTTGGTACAGTCTTGGTTGC+AGG | - | chr6.1:4085363-4085382 | None:intergenic | 50.0% | |
| GTTGTGGCTAAGTGTGCTGA+TGG | + | chr6.1:4083279-4083298 | MS.gene54717:CDS | 50.0% | |
| GTTTGTACCTGATTCTCCCC+TGG | - | chr6.1:4085122-4085141 | None:intergenic | 50.0% | |
| TCCAGGTGAGCAATTGAAGG+AGG | + | chr6.1:4084149-4084168 | MS.gene54717:CDS | 50.0% | |
| TCTGATGAGGATACTGACCG+TGG | + | chr6.1:4083102-4083121 | MS.gene54717:CDS | 50.0% | |
| TGCAGGAAATGGGATCTGTC+TGG | + | chr6.1:4084630-4084649 | MS.gene54717:CDS | 50.0% | |
| TGCAGGTGATGCTTCTGTTG+TGG | - | chr6.1:4085346-4085365 | None:intergenic | 50.0% | |
| TGTGGAAGATGTGGTGAGCT+TGG | + | chr6.1:4085044-4085063 | MS.gene54717:CDS | 50.0% | |
| ! | CTTATGAGTATGGAGGCACG+TGG | + | chr6.1:4082542-4082561 | MS.gene54717:CDS | 50.0% |
| ! | CTTGTTGTGGATGCAGCAGT+TGG | - | chr6.1:4085381-4085400 | None:intergenic | 50.0% |
| ! | GGCACATTGTTGCTTGCAAG+TGG | - | chr6.1:4085468-4085487 | None:intergenic | 50.0% |
| ! | TAGGTAGTTGGTCTAGGGCT+GGG | + | chr6.1:4084280-4084299 | MS.gene54717:CDS | 50.0% |
| ! | TCATGGTGCCTAAGAAGTGC+AGG | + | chr6.1:4085613-4085632 | MS.gene54717:CDS | 50.0% |
| ! | TGCAGCAGTTGGTACAGTCT+TGG | - | chr6.1:4085370-4085389 | None:intergenic | 50.0% |
| !! | CCAGTATTGGTTGCAACAGG+TGG | - | chr6.1:4085408-4085427 | None:intergenic | 50.0% |
| !! | CCATATGTTAGAAGGGCACC+AGG | + | chr6.1:4084912-4084931 | MS.gene54717:CDS | 50.0% |
| !! | GGTCCAGTATTGGTTGCAAC+AGG | - | chr6.1:4085411-4085430 | None:intergenic | 50.0% |
| !! | GTGACAGTGTTGCTTGCAGA+TGG | - | chr6.1:4085489-4085508 | None:intergenic | 50.0% |
| !! | TGAAGGTGTTGGTGCAGTTG+TGG | - | chr6.1:4085322-4085341 | None:intergenic | 50.0% |
| ACTGTGTGGTATGCTGTGGC+TGG | + | chr6.1:4082634-4082653 | MS.gene54717:CDS | 55.0% | |
| GACGAGCAGAGCTTTCACCA+TGG | - | chr6.1:4081942-4081961 | None:intergenic | 55.0% | |
| GCCTCCTTCAATTGCTCACC+TGG | - | chr6.1:4084153-4084172 | None:intergenic | 55.0% | |
| GTAAGAAGGAAGCTGAGGGC+TGG | + | chr6.1:4084511-4084530 | MS.gene54717:CDS | 55.0% | |
| GTGACAGGATGCTTGCACCA+GGG | + | chr6.1:4085102-4085121 | MS.gene54717:CDS | 55.0% | |
| TGACAGGATGCTTGCACCAG+GGG | + | chr6.1:4085103-4085122 | MS.gene54717:CDS | 55.0% | |
| TTGGGTGCAAGTGGTGCTTG+AGG | - | chr6.1:4085240-4085259 | None:intergenic | 55.0% | |
| ! | GATGGCCCAGCCTTTTTGCT+TGG | - | chr6.1:4085291-4085310 | None:intergenic | 55.0% |
| ! | GTAGGTAGTTGGTCTAGGGC+TGG | + | chr6.1:4084279-4084298 | MS.gene54717:CDS | 55.0% |
| !! | ATGTTAGAAGGGCACCAGGC+AGG | + | chr6.1:4084916-4084935 | MS.gene54717:CDS | 55.0% |
| !! | CTGAGGGCTGGTCTCCAAAT+TGG | + | chr6.1:4084523-4084542 | MS.gene54717:CDS | 55.0% |
| !! | GGCTGGTCTCCAAATTGGAG+TGG | + | chr6.1:4084528-4084547 | MS.gene54717:CDS | 55.0% |
| GCTTGCACCAGGGGAGAATC+AGG | + | chr6.1:4085112-4085131 | MS.gene54717:CDS | 60.0% | |
| GGTGACAGGATGCTTGCACC+AGG | + | chr6.1:4085101-4085120 | MS.gene54717:CDS | 60.0% | |
| GTGTGGTATGCTGTGGCTGG+AGG | + | chr6.1:4082637-4082656 | MS.gene54717:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 4081904 | 4085707 | 4081904 | ID=MS.gene54717 |
| chr6.1 | mRNA | 4081904 | 4085707 | 4081904 | ID=MS.gene54717.t1;Parent=MS.gene54717 |
| chr6.1 | exon | 4081904 | 4081998 | 4081904 | ID=MS.gene54717.t1.exon1;Parent=MS.gene54717.t1 |
| chr6.1 | CDS | 4081904 | 4081998 | 4081904 | ID=cds.MS.gene54717.t1;Parent=MS.gene54717.t1 |
| chr6.1 | exon | 4082453 | 4083962 | 4082453 | ID=MS.gene54717.t1.exon2;Parent=MS.gene54717.t1 |
| chr6.1 | CDS | 4082453 | 4083962 | 4082453 | ID=cds.MS.gene54717.t1;Parent=MS.gene54717.t1 |
| chr6.1 | exon | 4084060 | 4084730 | 4084060 | ID=MS.gene54717.t1.exon3;Parent=MS.gene54717.t1 |
| chr6.1 | CDS | 4084060 | 4084730 | 4084060 | ID=cds.MS.gene54717.t1;Parent=MS.gene54717.t1 |
| chr6.1 | exon | 4084818 | 4085133 | 4084818 | ID=MS.gene54717.t1.exon4;Parent=MS.gene54717.t1 |
| chr6.1 | CDS | 4084818 | 4085133 | 4084818 | ID=cds.MS.gene54717.t1;Parent=MS.gene54717.t1 |
| chr6.1 | exon | 4085216 | 4085707 | 4085216 | ID=MS.gene54717.t1.exon5;Parent=MS.gene54717.t1 |
| chr6.1 | CDS | 4085216 | 4085707 | 4085216 | ID=cds.MS.gene54717.t1;Parent=MS.gene54717.t1 |
| Gene Sequence |
| Protein sequence |
