Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56870.t1 | XP_013457802.1 | 95.7 | 141 | 4 | 1 | 1 | 141 | 1 | 139 | 8.10E-61 | 243 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56870.t1 | A0A072URZ9 | 95.7 | 141 | 4 | 1 | 1 | 141 | 1 | 139 | 5.9e-61 | 243.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene56870 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene56870 | 0.812796 | 3.54E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene56870 | 0.813485 | 2.50E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene56870 | 0.807057 | 6.09E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene56870 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene56870 | -0.802908 | 4.49E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene56870 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene56870 | 0.816554 | 5.21E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene56870 | 0.834069 | 3.71E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene56870 | 0.812178 | 4.83E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene56870 | 0.821756 | 3.41E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene56870 | 0.812208 | 4.76E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene56870 | -0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene56870 | 0.843384 | 1.45E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene56870 | 0.836286 | 1.02E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene56870 | 0.801559 | 8.51E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene56870 | 0.841127 | 5.74E-58 | -1.69E-46 |
| MS.gene053169 | MS.gene56870 | 0.800543 | 1.37E-48 | -1.69E-46 |
| MS.gene053494 | MS.gene56870 | 0.805419 | 1.35E-49 | -1.69E-46 |
| MS.gene053555 | MS.gene56870 | 0.801677 | 8.05E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene56870 | 0.824648 | 7.20E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene56870 | 0.833275 | 5.86E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene56870 | 0.832663 | 8.31E-56 | -1.69E-46 |
| MS.gene054719 | MS.gene56870 | 0.813338 | 2.69E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene56870 | 0.812437 | 4.24E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene56870 | 0.808839 | 2.54E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene56870 | 0.854792 | 9.72E-62 | -1.69E-46 |
| MS.gene055859 | MS.gene56870 | 0.829247 | 5.73E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene56870 | 0.803702 | 3.07E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene56870 | 0.839016 | 2.04E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene56870 | 0.808599 | 2.86E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene56870 | 0.822971 | 1.78E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene56870 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene56870 | 0.81455 | 1.46E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene56870 | 0.83242 | 9.55E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene56870 | 0.839234 | 1.79E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene56870 | 0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene56870 | 0.836887 | 7.19E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene56870 | 0.824164 | 9.36E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene56870 | 0.800576 | 1.35E-48 | -1.69E-46 |
| MS.gene059788 | MS.gene56870 | 0.818359 | 2.04E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene56870 | 0.821297 | 4.35E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene56870 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene060986 | MS.gene56870 | 0.816233 | 6.15E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene56870 | 0.821189 | 4.61E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene56870 | 0.803727 | 3.04E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene56870 | 0.829846 | 4.10E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56870.t1 | MTR_4g105610 | 95.745 | 141 | 4 | 1 | 1 | 141 | 1 | 139 | 5.93e-92 | 267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 30 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGTTTAAGGAGGCTAATTA+AGG | 0.341665 | 8.1:-17580468 | MS.gene56870:CDS |
| TTTGGCGGGTTTGCGGTTGA+TGG | 0.351768 | 8.1:-17580805 | MS.gene56870:CDS |
| GTTAAGTAGTACCAAGAGTT+TGG | 0.384169 | 8.1:-17580823 | MS.gene56870:CDS |
| AGCCTCCTTAAACGCAAAAC+AGG | 0.417473 | 8.1:+17580476 | None:intergenic |
| CCAAGAGTTTGGCGGGTTTG+CGG | 0.430302 | 8.1:-17580812 | MS.gene56870:CDS |
| CCGCAAACCCGCCAAACTCT+TGG | 0.454081 | 8.1:+17580812 | None:intergenic |
| TGCTCTCTTGAAACAACAAA+TGG | 0.454342 | 8.1:-17580652 | MS.gene56870:CDS |
| GGTGGCATGTAGTAATAATT+CGG | 0.455634 | 8.1:-17580727 | MS.gene56870:CDS |
| TTGGCGGGTTTGCGGTTGAT+GGG | 0.472771 | 8.1:-17580804 | MS.gene56870:CDS |
| GATAGAAATGAGGTTGAACT+TGG | 0.475178 | 8.1:+17580690 | None:intergenic |
| GCTTAAGTTGTTTGAAGAAG+AGG | 0.484114 | 8.1:-17580501 | MS.gene56870:CDS |
| GTTCAACCTCATTTCTATCT+CGG | 0.485915 | 8.1:-17580686 | MS.gene56870:CDS |
| AATTGCTGATGAGAGATTCC+AGG | 0.487924 | 8.1:-17580441 | MS.gene56870:intron |
| ATGAAGCGAGGGTGAAAAGA+AGG | 0.496678 | 8.1:-17580779 | MS.gene56870:CDS |
| TACCAACGTTGTAGCATCAC+TGG | 0.515982 | 8.1:+17579319 | None:intergenic |
| AAGTAGTACCAAGAGTTTGG+CGG | 0.543463 | 8.1:-17580820 | MS.gene56870:CDS |
| AGTAGTACCAAGAGTTTGGC+GGG | 0.546540 | 8.1:-17580819 | MS.gene56870:CDS |
| GGCATTGTTATAGGATTACA+AGG | 0.561955 | 8.1:-17580546 | MS.gene56870:intron |
| CAATAGCAATAGCATGGTGG+TGG | 0.572915 | 8.1:-17580745 | MS.gene56870:CDS |
| TGAAGCGAGGGTGAAAAGAA+GGG | 0.587536 | 8.1:-17580778 | MS.gene56870:CDS |
| TTGTTGTTTCAAGAGAGCAT+AGG | 0.596200 | 8.1:+17580656 | None:intergenic |
| TTCCAGTGATGCTACAACGT+TGG | 0.604919 | 8.1:-17579321 | MS.gene56870:CDS |
| GGTTGATGGGTCATGAAGCG+AGG | 0.630103 | 8.1:-17580791 | MS.gene56870:CDS |
| TTGAGTCCGAGATAGAAATG+AGG | 0.635687 | 8.1:+17580680 | None:intergenic |
| CAATAGCAATAGCAATAGCA+TGG | 0.638289 | 8.1:-17580751 | MS.gene56870:CDS |
| GAAGCGAGGGTGAAAAGAAG+GGG | 0.645653 | 8.1:-17580777 | MS.gene56870:CDS |
| GCGAGGGTGAAAAGAAGGGG+TGG | 0.662555 | 8.1:-17580774 | MS.gene56870:CDS |
| GTTGATGGGTCATGAAGCGA+GGG | 0.668748 | 8.1:-17580790 | MS.gene56870:CDS |
| GGAAGTAGCTGCTAAATCCG+AGG | 0.672628 | 8.1:-17580631 | MS.gene56870:intron |
| TAGCAATAGCAATAGCATGG+TGG | 0.729970 | 8.1:-17580748 | MS.gene56870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAGTGTATTTTGAA+AGG | + | chr8.1:17579790-17579809 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTGTATTTTGAAA+GGG | + | chr8.1:17579789-17579808 | None:intergenic | 15.0% |
| !! | AAATTTGAACTCTGTAAATA+TGG | + | chr8.1:17580503-17580522 | None:intergenic | 20.0% |
| !! | AATGCATTACAATATTCAAT+AGG | - | chr8.1:17579868-17579887 | MS.gene56870:intron | 20.0% |
| !! | ACTTAATTAAAAATTGTGTG+TGG | - | chr8.1:17579985-17580004 | MS.gene56870:intron | 20.0% |
| !! | CTTAATTAAAAATTGTGTGT+GGG | - | chr8.1:17579986-17580005 | MS.gene56870:intron | 20.0% |
| !! | TTAAGTGTACAAAAAATACA+AGG | + | chr8.1:17579971-17579990 | None:intergenic | 20.0% |
| !! | TTTATTGAATTGTGAAACAT+AGG | + | chr8.1:17580561-17580580 | None:intergenic | 20.0% |
| ! | AATGAGTAAAAGCTATAGAT+TGG | + | chr8.1:17580450-17580469 | None:intergenic | 25.0% |
| ! | AATTAGAGATGAAATATGCA+TGG | + | chr8.1:17580682-17580701 | None:intergenic | 25.0% |
| ! | ACGCTTTATAATCTATTGTT+AGG | + | chr8.1:17579933-17579952 | None:intergenic | 25.0% |
| ! | TAAAGAAAATAATAGACACC+TGG | + | chr8.1:17579733-17579752 | None:intergenic | 25.0% |
| ! | TCAATTGTAGAATCTCAAAT+TGG | - | chr8.1:17579566-17579585 | MS.gene56870:intron | 25.0% |
| ! | TCGAGTGTACAAAAAATATA+AGG | - | chr8.1:17580035-17580054 | MS.gene56870:intron | 25.0% |
| ! | TTTACAGAGTTCAAATTTGT+TGG | - | chr8.1:17580505-17580524 | MS.gene56870:CDS | 25.0% |
| !!! | ATTACTTTTGAAAACTACAC+CGG | - | chr8.1:17580175-17580194 | MS.gene56870:intron | 25.0% |
| !!! | GAACATTTTAAAAAAGAGTG+TGG | + | chr8.1:17580815-17580834 | None:intergenic | 25.0% |
| ATCTTCTACAAAGAGTTCAA+AGG | + | chr8.1:17580235-17580254 | None:intergenic | 30.0% | |
| GAAAAAGACAATACTAACCT+CGG | + | chr8.1:17579542-17579561 | None:intergenic | 30.0% | |
| TCTTCTACAAAGAGTTCAAA+GGG | + | chr8.1:17580234-17580253 | None:intergenic | 30.0% | |
| TCTTCTCAATAAGTTAGACA+GGG | - | chr8.1:17580471-17580490 | MS.gene56870:CDS | 30.0% | |
| TGTAGAATCTCAAATTGGAA+TGG | - | chr8.1:17579571-17579590 | MS.gene56870:intron | 30.0% | |
| ! | CAATTTGAGTATTGTGGAAT+AGG | + | chr8.1:17580378-17580397 | None:intergenic | 30.0% |
| ! | GGTGTAGTTTTCAAAAGTAA+TGG | + | chr8.1:17580176-17580195 | None:intergenic | 30.0% |
| ! | TCACATCAATTTGAGTATTG+TGG | + | chr8.1:17580384-17580403 | None:intergenic | 30.0% |
| !! | AGTTCAAATTTGTTGGAGTA+TGG | - | chr8.1:17580512-17580531 | MS.gene56870:CDS | 30.0% |
| AATGCATTGTCCATACCATT+TGG | + | chr8.1:17579856-17579875 | None:intergenic | 35.0% | |
| ATAGGATCACATAGACTGAT+AGG | + | chr8.1:17580543-17580562 | None:intergenic | 35.0% | |
| ATGCATTGTCCATACCATTT+GGG | + | chr8.1:17579855-17579874 | None:intergenic | 35.0% | |
| CAATAGCAATAGCAATAGCA+TGG | - | chr8.1:17579402-17579421 | MS.gene56870:intron | 35.0% | |
| CTCTTCTCAATAAGTTAGAC+AGG | - | chr8.1:17580470-17580489 | MS.gene56870:CDS | 35.0% | |
| GACAAAAAAAGAAACATGCG+AGG | - | chr8.1:17579897-17579916 | MS.gene56870:intron | 35.0% | |
| GATAGAAATGAGGTTGAACT+TGG | + | chr8.1:17579466-17579485 | None:intergenic | 35.0% | |
| GGCATTGTTATAGGATTACA+AGG | - | chr8.1:17579607-17579626 | MS.gene56870:intron | 35.0% | |
| GGTGGCATGTAGTAATAATT+CGG | - | chr8.1:17579426-17579445 | MS.gene56870:intron | 35.0% | |
| GTATCAAAGTTACACGAGAA+TGG | - | chr8.1:17580101-17580120 | MS.gene56870:intron | 35.0% | |
| GTTAAGTAGTACCAAGAGTT+TGG | - | chr8.1:17579330-17579349 | MS.gene56870:CDS | 35.0% | |
| GTTCAACCTCATTTCTATCT+CGG | - | chr8.1:17579467-17579486 | MS.gene56870:intron | 35.0% | |
| TATGTCGATCTGATAGAATG+TGG | + | chr8.1:17580659-17580678 | None:intergenic | 35.0% | |
| TGCTCTCTTGAAACAACAAA+TGG | - | chr8.1:17579501-17579520 | MS.gene56870:intron | 35.0% | |
| TGTAATCCTATAACAATGCC+CGG | + | chr8.1:17579607-17579626 | None:intergenic | 35.0% | |
| TGTAGAAGATTCACAACCTT+TGG | - | chr8.1:17580245-17580264 | MS.gene56870:intron | 35.0% | |
| TTGGAATGGAAGATAAGAAC+CGG | - | chr8.1:17579585-17579604 | MS.gene56870:intron | 35.0% | |
| ! | CACTCTTCCTTCTTATTTCT+AGG | - | chr8.1:17580751-17580770 | MS.gene56870:CDS | 35.0% |
| ! | CTAGTTGTGTTTGACACTTT+TGG | + | chr8.1:17580281-17580300 | None:intergenic | 35.0% |
| ! | GCTTAAGTTGTTTGAAGAAG+AGG | - | chr8.1:17579652-17579671 | MS.gene56870:intron | 35.0% |
| !! | AATGGTTTTGCCATCCAAAA+AGG | + | chr8.1:17580158-17580177 | None:intergenic | 35.0% |
| !! | ATGGTTTTGCCATCCAAAAA+GGG | + | chr8.1:17580157-17580176 | None:intergenic | 35.0% |
| !! | TTGTTGTTTCAAGAGAGCAT+AGG | + | chr8.1:17579500-17579519 | None:intergenic | 35.0% |
| !! | TTTGCTTAAAGCGGTTTTGA+TGG | - | chr8.1:17580349-17580368 | MS.gene56870:intron | 35.0% |
| AAGTAGTACCAAGAGTTTGG+CGG | - | chr8.1:17579333-17579352 | MS.gene56870:CDS | 40.0% | |
| AATTGCTGATGAGAGATTCC+AGG | - | chr8.1:17579712-17579731 | MS.gene56870:intron | 40.0% | |
| CAAAGTTACACGAGAATGGA+AGG | - | chr8.1:17580105-17580124 | MS.gene56870:intron | 40.0% | |
| GCGTTTAAGGAGGCTAATTA+AGG | - | chr8.1:17579685-17579704 | MS.gene56870:intron | 40.0% | |
| GCTGCATCCTAGAAATAAGA+AGG | + | chr8.1:17580761-17580780 | None:intergenic | 40.0% | |
| GTACACTCGAGCTAAATTGT+TGG | + | chr8.1:17580025-17580044 | None:intergenic | 40.0% | |
| TAACTCTCACCCAAATGGTA+TGG | - | chr8.1:17579843-17579862 | MS.gene56870:intron | 40.0% | |
| TAGCAATAGCAATAGCATGG+TGG | - | chr8.1:17579405-17579424 | MS.gene56870:intron | 40.0% | |
| TGCCATCCAAAAAGGGTTAA+TGG | + | chr8.1:17580150-17580169 | None:intergenic | 40.0% | |
| TGGAATGGAAGATAAGAACC+GGG | - | chr8.1:17579586-17579605 | MS.gene56870:intron | 40.0% | |
| TTCCAAGTAACATGTGAGTG+AGG | - | chr8.1:17579808-17579827 | MS.gene56870:intron | 40.0% | |
| TTGAGTCCGAGATAGAAATG+AGG | + | chr8.1:17579476-17579495 | None:intergenic | 40.0% | |
| ! | AACCTGTTTTGCGTTTAAGG+AGG | - | chr8.1:17579675-17579694 | MS.gene56870:intron | 40.0% |
| ! | AGGAACCTGTTTTGCGTTTA+AGG | - | chr8.1:17579672-17579691 | MS.gene56870:intron | 40.0% |
| ! | CAAAACCGCTTTAAGCAAAG+TGG | + | chr8.1:17580348-17580367 | None:intergenic | 40.0% |
| ! | TAAGAACCGGGCATTGTTAT+AGG | - | chr8.1:17579598-17579617 | MS.gene56870:intron | 40.0% |
| ! | TGCCATTAACCCTTTTTGGA+TGG | - | chr8.1:17580145-17580164 | MS.gene56870:intron | 40.0% |
| ! | TTTGGCCACTTTGCTTAAAG+CGG | - | chr8.1:17580340-17580359 | MS.gene56870:intron | 40.0% |
| !! | AGTGTGCCATTAACCCTTTT+TGG | - | chr8.1:17580141-17580160 | MS.gene56870:intron | 40.0% |
| AAAACTACACCGGTAGACCT+AGG | - | chr8.1:17580185-17580204 | MS.gene56870:intron | 45.0% | |
| AGCCTCCTTAAACGCAAAAC+AGG | + | chr8.1:17579680-17579699 | None:intergenic | 45.0% | |
| AGTAGTACCAAGAGTTTGGC+GGG | - | chr8.1:17579334-17579353 | MS.gene56870:CDS | 45.0% | |
| ATAGCAATGTTGCGTCTCCT+AGG | + | chr8.1:17580205-17580224 | None:intergenic | 45.0% | |
| ATGAAGCGAGGGTGAAAAGA+AGG | - | chr8.1:17579374-17579393 | MS.gene56870:CDS | 45.0% | |
| CAATAGCAATAGCATGGTGG+TGG | - | chr8.1:17579408-17579427 | MS.gene56870:intron | 45.0% | |
| CACTCGAGCTAAATTGTTGG+AGG | + | chr8.1:17580022-17580041 | None:intergenic | 45.0% | |
| CTCCTCACTCACATGTTACT+TGG | + | chr8.1:17579813-17579832 | None:intergenic | 45.0% | |
| GAGCATAACTCTCACCCAAA+TGG | - | chr8.1:17579838-17579857 | MS.gene56870:intron | 45.0% | |
| TACCAACGTTGTAGCATCAC+TGG | + | chr8.1:17580837-17580856 | None:intergenic | 45.0% | |
| TGAACATGCTTTCTCGCGTT+TGG | - | chr8.1:17580322-17580341 | MS.gene56870:intron | 45.0% | |
| TGAAGCGAGGGTGAAAAGAA+GGG | - | chr8.1:17579375-17579394 | MS.gene56870:CDS | 45.0% | |
| TTCCAGTGATGCTACAACGT+TGG | - | chr8.1:17580832-17580851 | MS.gene56870:CDS | 45.0% | |
| TTGGGTGAGAGTTATGCTCA+CGG | + | chr8.1:17579837-17579856 | None:intergenic | 45.0% | |
| !! | GATTCACAACCTTTGGTGCT+AGG | - | chr8.1:17580252-17580271 | MS.gene56870:intron | 45.0% |
| !!! | TTTTGGCTTCCTAGCACCAA+AGG | + | chr8.1:17580264-17580283 | None:intergenic | 45.0% |
| ACACGAGAATGGAAGGCAAG+CGG | - | chr8.1:17580112-17580131 | MS.gene56870:intron | 50.0% | |
| GAAGCGAGGGTGAAAAGAAG+GGG | - | chr8.1:17579376-17579395 | MS.gene56870:CDS | 50.0% | |
| GGAAGTAGCTGCTAAATCCG+AGG | - | chr8.1:17579522-17579541 | MS.gene56870:intron | 50.0% | |
| ! | GTTGATGGGTCATGAAGCGA+GGG | - | chr8.1:17579363-17579382 | MS.gene56870:CDS | 50.0% |
| CACGAGAATGGAAGGCAAGC+GGG | - | chr8.1:17580113-17580132 | MS.gene56870:intron | 55.0% | |
| GTTGCGTCTCCTAGGTCTAC+CGG | + | chr8.1:17580197-17580216 | None:intergenic | 55.0% | |
| !! | CCAAGAGTTTGGCGGGTTTG+CGG | - | chr8.1:17579341-17579360 | MS.gene56870:CDS | 55.0% |
| !! | GGTTGATGGGTCATGAAGCG+AGG | - | chr8.1:17579362-17579381 | MS.gene56870:CDS | 55.0% |
| !! | TTGGCGGGTTTGCGGTTGAT+GGG | - | chr8.1:17579349-17579368 | MS.gene56870:CDS | 55.0% |
| !! | TTTGGCGGGTTTGCGGTTGA+TGG | - | chr8.1:17579348-17579367 | MS.gene56870:CDS | 55.0% |
| CCGCAAACCCGCCAAACTCT+TGG | + | chr8.1:17579344-17579363 | None:intergenic | 60.0% | |
| GCGAGGGTGAAAAGAAGGGG+TGG | - | chr8.1:17579379-17579398 | MS.gene56870:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 17579316 | 17580859 | 17579316 | ID=MS.gene56870 |
| chr8.1 | mRNA | 17579316 | 17580859 | 17579316 | ID=MS.gene56870.t1;Parent=MS.gene56870 |
| chr8.1 | exon | 17580632 | 17580859 | 17580632 | ID=MS.gene56870.t1.exon1;Parent=MS.gene56870.t1 |
| chr8.1 | CDS | 17580632 | 17580859 | 17580632 | ID=cds.MS.gene56870.t1;Parent=MS.gene56870.t1 |
| chr8.1 | exon | 17580442 | 17580555 | 17580442 | ID=MS.gene56870.t1.exon2;Parent=MS.gene56870.t1 |
| chr8.1 | CDS | 17580442 | 17580555 | 17580442 | ID=cds.MS.gene56870.t1;Parent=MS.gene56870.t1 |
| chr8.1 | exon | 17579316 | 17579402 | 17579316 | ID=MS.gene56870.t1.exon3;Parent=MS.gene56870.t1 |
| chr8.1 | CDS | 17579316 | 17579402 | 17579316 | ID=cds.MS.gene56870.t1;Parent=MS.gene56870.t1 |
| Gene Sequence |
| Protein sequence |
