AlfalfaGEDB | MS.gene58630

M. sativa cultivar XinJiangDaYe / MS.gene58630

KEGG: -
GO: -
PFAM: PF16913.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58630.t1	XP_013463315.1	97.5	317	8	0	44	360	98	414	3.70E-150	541.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58630.t1	Q9SY29	60.3	302	114	3	47	346	56	353	1.2e-93	344.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58630.t1	A0A072V6T6	97.5	317	8	0	44	360	98	414	2.6e-150	541.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049356	MS.gene58630	0.814681	1.36E-51	-1.69E-46
MS.gene050301	MS.gene58630	0.816872	4.42E-52	-1.69E-46
MS.gene050670	MS.gene58630	0.844485	7.34E-59	-1.69E-46
MS.gene05105	MS.gene58630	0.811137	8.14E-51	-1.69E-46
MS.gene051525	MS.gene58630	0.839122	1.91E-57	-1.69E-46
MS.gene051582	MS.gene58630	0.808951	2.41E-50	-1.69E-46
MS.gene052011	MS.gene58630	-0.828006	1.14E-54	-1.69E-46
MS.gene052188	MS.gene58630	0.859436	4.14E-63	-1.69E-46
MS.gene052253	MS.gene58630	0.820358	7.16E-53	-1.69E-46
MS.gene052340	MS.gene58630	0.851192	1.04E-60	-1.69E-46
MS.gene052485	MS.gene58630	0.814173	1.76E-51	-1.69E-46
MS.gene053169	MS.gene58630	0.824184	9.26E-54	-1.69E-46
MS.gene053836	MS.gene58630	0.806706	7.22E-50	-1.69E-46
MS.gene053928	MS.gene58630	0.831559	1.56E-55	-1.69E-46
MS.gene054123	MS.gene58630	0.815097	1.10E-51	-1.69E-46
MS.gene054183	MS.gene58630	0.829039	6.43E-55	-1.69E-46
MS.gene054349	MS.gene58630	0.839918	1.19E-57	-1.69E-46
MS.gene054556	MS.gene58630	0.84839	6.32E-60	-1.69E-46
MS.gene054719	MS.gene58630	0.81339	2.62E-51	-1.69E-46
MS.gene055116	MS.gene58630	0.84598	2.89E-59	-1.69E-46
MS.gene055369	MS.gene58630	0.828562	8.39E-55	-1.69E-46
MS.gene055539	MS.gene58630	0.832111	1.14E-55	-1.69E-46
MS.gene05553	MS.gene58630	0.847276	1.28E-59	-1.69E-46
MS.gene055604	MS.gene58630	0.812288	4.57E-51	-1.69E-46
MS.gene055741	MS.gene58630	0.809805	1.58E-50	-1.69E-46
MS.gene055744	MS.gene58630	0.819457	1.15E-52	-1.69E-46
MS.gene055911	MS.gene58630	0.804947	1.69E-49	-1.69E-46
MS.gene056191	MS.gene58630	0.810846	9.41E-51	-1.69E-46
MS.gene056407	MS.gene58630	0.82712	1.86E-54	-1.69E-46
MS.gene056514	MS.gene58630	0.805598	1.24E-49	-1.69E-46
MS.gene056659	MS.gene58630	0.859175	4.96E-63	-1.69E-46
MS.gene056723	MS.gene58630	0.832038	1.19E-55	-1.69E-46
MS.gene05702	MS.gene58630	0.80231	5.96E-49	-1.69E-46
MS.gene057396	MS.gene58630	0.82986	4.06E-55	-1.69E-46
MS.gene057476	MS.gene58630	0.800462	1.42E-48	-1.69E-46
MS.gene057749	MS.gene58630	0.844733	6.30E-59	-1.69E-46
MS.gene057823	MS.gene58630	0.844753	6.22E-59	-1.69E-46
MS.gene057825	MS.gene58630	0.840502	8.36E-58	-1.69E-46
MS.gene058002	MS.gene58630	0.815047	1.13E-51	-1.69E-46
MS.gene058007	MS.gene58630	0.858005	1.11E-62	-1.69E-46
MS.gene058142	MS.gene58630	0.819624	1.05E-52	-1.69E-46
MS.gene058700	MS.gene58630	0.838754	2.38E-57	-1.69E-46
MS.gene05886	MS.gene58630	0.819647	1.04E-52	-1.69E-46
MS.gene058928	MS.gene58630	0.800079	1.71E-48	-1.69E-46
MS.gene058948	MS.gene58630	0.808484	3.03E-50	-1.69E-46
MS.gene058949	MS.gene58630	0.85126	9.97E-61	-1.69E-46
MS.gene059011	MS.gene58630	0.8057	1.18E-49	-1.69E-46
MS.gene05907	MS.gene58630	0.838957	2.11E-57	-1.69E-46
MS.gene059082	MS.gene58630	0.818626	1.78E-52	-1.69E-46
MS.gene059420	MS.gene58630	0.857095	2.06E-62	-1.69E-46
MS.gene059462	MS.gene58630	0.822823	1.93E-53	-1.69E-46
MS.gene059676	MS.gene58630	0.822083	2.86E-53	-1.69E-46
MS.gene059688	MS.gene58630	0.821899	3.16E-53	-1.69E-46
MS.gene059692	MS.gene58630	0.825622	4.24E-54	-1.69E-46
MS.gene059695	MS.gene58630	0.833527	5.07E-56	-1.69E-46
MS.gene05984	MS.gene58630	0.802204	6.27E-49	-1.69E-46
MS.gene060247	MS.gene58630	0.823022	1.73E-53	-1.69E-46
MS.gene060407	MS.gene58630	0.803793	2.94E-49	-1.69E-46
MS.gene061049	MS.gene58630	0.819765	9.78E-53	-1.69E-46
MS.gene061154	MS.gene58630	0.82841	9.13E-55	-1.69E-46
MS.gene061159	MS.gene58630	0.826429	2.73E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58630.t1	MTR_2g437590	97.476	317	8	0	44	360	98	414	0.0	634
MS.gene58630.t1	MTR_2g437580	83.974	312	48	2	44	354	78	388	0.0	517
MS.gene58630.t1	MTR_3g099740	38.585	311	172	4	45	337	45	354	8.05e-67	215
MS.gene58630.t1	MTR_3g099750	37.143	315	171	4	45	337	44	353	4.96e-64	208
MS.gene58630.t1	MTR_5g065080	35.220	318	184	5	45	349	48	356	1.19e-60	199
MS.gene58630.t1	MTR_7g080750	33.442	308	184	5	45	345	57	350	1.46e-48	167
MS.gene58630.t1	MTR_2g015470	33.121	314	197	5	45	351	70	377	1.64e-48	168
MS.gene58630.t1	MTR_3g058660	35.350	314	178	8	45	343	43	346	6.75e-42	150
MS.gene58630.t1	MTR_4g098900	33.227	313	172	9	45	343	63	352	2.30e-41	150
MS.gene58630.t1	MTR_8g024620	32.069	290	180	8	45	326	70	350	8.06e-37	136
MS.gene58630.t1	MTR_8g024620	32.069	290	180	8	45	326	81	361	9.70e-37	136
MS.gene58630.t1	MTR_8g024620	32.069	290	180	8	45	326	82	362	9.88e-37	136
MS.gene58630.t1	MTR_6g082540	30.994	171	109	5	182	348	4	169	3.44e-18	81.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58630.t1	AT1G30840	68.662	284	87	2	45	326	54	337	1.86e-131	381
MS.gene58630.t1	AT1G30840	68.662	284	87	2	45	326	54	337	1.86e-131	381
MS.gene58630.t1	AT1G28220	36.424	302	182	4	45	338	32	331	8.14e-66	212
MS.gene58630.t1	AT1G28230	36.503	326	187	4	45	355	32	352	2.86e-63	206
MS.gene58630.t1	AT2G33750	36.228	334	202	5	12	337	1	331	6.71e-60	197
MS.gene58630.t1	AT2G33750	35.072	345	202	6	12	337	1	342	2.17e-56	188
MS.gene58630.t1	AT4G08700	34.471	293	183	4	45	333	64	351	1.63e-45	159
MS.gene58630.t1	AT1G44750	33.333	294	192	2	45	335	60	352	3.71e-44	156
MS.gene58630.t1	AT1G44750	33.333	294	192	2	45	335	60	352	3.71e-44	156
MS.gene58630.t1	AT1G44750	33.333	294	192	2	45	335	72	364	6.20e-44	156
MS.gene58630.t1	AT4G18220	35.117	299	177	6	42	330	70	361	1.08e-43	155
MS.gene58630.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.28e-42	150
MS.gene58630.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.28e-42	150
MS.gene58630.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.28e-42	150
MS.gene58630.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.28e-42	150
MS.gene58630.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.28e-42	150
MS.gene58630.t1	AT5G41160	32.423	293	192	4	45	333	64	354	1.01e-39	144
MS.gene58630.t1	AT4G18190	32.609	322	192	9	45	348	64	378	5.29e-39	143
MS.gene58630.t1	AT4G18210	32.911	316	193	7	45	348	73	381	9.70e-38	139
MS.gene58630.t1	AT4G18195	32.026	306	186	8	42	335	71	366	5.17e-32	124
MS.gene58630.t1	AT4G18205	29.667	300	201	5	42	335	65	360	5.96e-32	124
MS.gene58630.t1	AT2G24220	29.032	279	191	3	45	320	66	340	1.57e-27	111
MS.gene58630.t1	AT2G24220	29.032	279	191	3	45	320	84	358	1.57e-27	112
MS.gene58630.t1	AT4G18197	28.333	300	205	5	42	335	68	363	5.90e-27	110
MS.gene58630.t1	AT1G57990	25.312	320	214	8	42	344	76	387	8.86e-17	81.3
MS.gene58630.t1	AT1G57980	26.524	328	208	11	42	349	80	394	2.73e-16	79.7
MS.gene58630.t1	AT1G57943	23.585	318	223	7	42	344	82	394	1.88e-15	77.4
MS.gene58630.t1	AT1G57943	23.585	318	223	7	42	344	83	395	2.24e-15	77.0
MS.gene58630.t1	AT1G09860	24.496	347	226	13	21	346	50	381	4.18e-14	73.2
MS.gene58630.t1	AT1G19770	25.000	276	182	8	73	328	116	386	1.12e-12	68.9
MS.gene58630.t1	AT1G47603	26.220	328	204	10	21	328	67	376	1.24e-12	68.9

Find 55 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAAGGGAAGTAGAGTTTAT+TGG	0.279865	2.3:+54111708	MS.gene58630:CDS
TTATAAACCTTCTCCATAAC+TGG	0.280738	2.3:-54111551	None:intergenic
TGGTGAGATTGAGGAGATAA+GGG	0.288450	2.3:-54111175	None:intergenic
TTCTTGACATCTTCATTAAC+TGG	0.298768	2.3:+54111794	MS.gene58630:CDS
TGCACTTTATTTACCAGTTA+TGG	0.308330	2.3:+54111538	MS.gene58630:CDS
AGTTTATTGGGTGACGGTTA+TGG	0.334506	2.3:+54111721	MS.gene58630:CDS
TAAGGGAAGTAGAGTTTATT+GGG	0.337303	2.3:+54111709	MS.gene58630:CDS
TTGGTGAGATTGAGGAGATA+AGG	0.343021	2.3:-54111176	None:intergenic
TGTTTCTTCTTGATGATCAA+TGG	0.353300	2.3:-54110904	None:intergenic
TCCACAAAGGTTCAAGCAAA+TGG	0.354436	2.3:+54111096	MS.gene58630:intron
CAAGCAAATGGGTCTCTACT+TGG	0.360905	2.3:+54111108	MS.gene58630:CDS
ATCAGTGAAAGGGTTTCTTT+TGG	0.372970	2.3:-54111195	None:intergenic
AAAAGTTTATTGTTACGAAA+TGG	0.386412	2.3:+54111574	MS.gene58630:CDS
GATGGAAATGCAGCTTATAA+TGG	0.403898	2.3:+54111598	MS.gene58630:CDS
GTTGTTTATAGAGATGAATT+TGG	0.416669	2.3:+54111866	MS.gene58630:CDS
TCTACTTGGGTTCAATGTGC+TGG	0.422043	2.3:+54111122	MS.gene58630:CDS
TTGAGTACTATGAGAAGAAG+TGG	0.434168	2.3:+54112016	MS.gene58630:CDS
AAAAGTGCTGAAGTTGAAAC+AGG	0.437415	2.3:-54111308	None:intergenic
GTTAAGATGTTGGAAGAGAA+AGG	0.463040	2.3:+54111956	MS.gene58630:CDS
TTGTTGTCTATGAATGTGTT+GGG	0.470612	2.3:+54111836	MS.gene58630:CDS
TTTGTTGTCTATGAATGTGT+TGG	0.476057	2.3:+54111835	MS.gene58630:CDS
AGAGAAAGGGAAGATCGTTA+AGG	0.485099	2.3:+54111970	MS.gene58630:CDS
CCACAAAGGTTCAAGCAAAT+GGG	0.489497	2.3:+54111097	MS.gene58630:intron
TTGGTGTGAAATCAGTGAAA+GGG	0.497171	2.3:-54111205	None:intergenic
TTAAGATGTTGGAAGAGAAA+GGG	0.499536	2.3:+54111957	MS.gene58630:CDS
TCTAGTAGTGAGAGACCAAA+AGG	0.503256	2.3:+54111455	MS.gene58630:CDS
TTTGATCATTTGCATGCAGG+TGG	0.522538	2.3:-54110971	None:intergenic
AGAAATGAAGAGAGAAAGTG+AGG	0.526851	2.3:+54111676	MS.gene58630:CDS
TGACATCTTCATTAACTGGT+GGG	0.528350	2.3:+54111798	MS.gene58630:CDS
TTGTTGTTGACAAATGGTGA+TGG	0.529791	2.3:-54110945	None:intergenic
TTATTGTTACGAAATGGTGA+TGG	0.534521	2.3:+54111580	MS.gene58630:CDS
AGCGACAGTGGGAATGGCGT+GGG	0.535390	2.3:+54111640	MS.gene58630:CDS
TTGACATCTTCATTAACTGG+TGG	0.536861	2.3:+54111797	MS.gene58630:CDS
TTTGGTGTGAAATCAGTGAA+AGG	0.536940	2.3:-54111206	None:intergenic
AAGCAAATGGGTCTCTACTT+GGG	0.537370	2.3:+54111109	MS.gene58630:CDS
GGAAAGGAATGATTCTTCCA+TGG	0.538536	2.3:+54111991	MS.gene58630:CDS
AGAAGAAGTGGAGGTGCAGC+TGG	0.540825	2.3:+54112028	MS.gene58630:CDS
TGGTATGTATGTTAAGATGT+TGG	0.542161	2.3:+54111946	MS.gene58630:CDS
AAGTAGAGTTTATTGGGTGA+CGG	0.542295	2.3:+54111715	MS.gene58630:CDS
GTGGGAATGGCGTGGGACGG+CGG	0.550756	2.3:+54111647	MS.gene58630:CDS
AAGGGAAGATCGTTAAGGAA+AGG	0.560916	2.3:+54111975	MS.gene58630:CDS
ACAGTGGGAATGGCGTGGGA+CGG	0.571066	2.3:+54111644	MS.gene58630:CDS
TTATTTACCAGTTATGGAGA+AGG	0.571264	2.3:+54111544	MS.gene58630:CDS
TATAATGGAGATTGCAGCGA+CGG	0.573317	2.3:+54111613	MS.gene58630:CDS
TAGCGACAGTGGGAATGGCG+TGG	0.574181	2.3:+54111639	MS.gene58630:CDS
AAAATTGGGATGATTAAGAG+AGG	0.581342	2.3:-54111149	None:intergenic
AAATAACAACCCTGCACCAA+GGG	0.586933	2.3:-54111516	None:intergenic
GTTTATAGAGATGAATTTGG+TGG	0.600174	2.3:+54111869	MS.gene58630:CDS
TCTCATAGTACTCAACTCCA+TGG	0.606411	2.3:-54112008	None:intergenic
TTGTCTATGAATGTGTTGGG+TGG	0.612302	2.3:+54111839	MS.gene58630:CDS
AATGAAGAGAGAAAGTGAGG+AGG	0.621575	2.3:+54111679	MS.gene58630:CDS
AAATTGGGATGATTAAGAGA+GGG	0.629799	2.3:-54111148	None:intergenic
CAAATAACAACCCTGCACCA+AGG	0.641471	2.3:-54111517	None:intergenic
TTATGGCGAATGTCGTGACG+TGG	0.680193	2.3:+54111738	MS.gene58630:CDS
AGTACTATGAGAAGAAGTGG+AGG	0.697026	2.3:+54112019	MS.gene58630:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAAAAAAAGAATACTTTAT+TGG	+	chr2.3:54111482-54111501	MS.gene58630:CDS	15.0%
!!	AAAAGTTTATTGTTACGAAA+TGG	+	chr2.3:54111574-54111593	MS.gene58630:CDS	20.0%
!!!	TAACAATCTTTTAATCTCAT+GGG	+	chr2.3:54111271-54111290	MS.gene58630:CDS	20.0%
!!!	TTAACAATCTTTTAATCTCA+TGG	+	chr2.3:54111270-54111289	MS.gene58630:CDS	20.0%
!	AAAAATCCATCACAAACAAA+AGG	+	chr2.3:54110991-54111010	MS.gene58630:CDS	25.0%
!	AAATACTATTTCATCCACAA+AGG	+	chr2.3:54111083-54111102	MS.gene58630:intron	25.0%
!	GATACCAACAAAAATTGATA+GGG	-	chr2.3:54111240-54111259	None:intergenic	25.0%
!	GTTGTTTATAGAGATGAATT+TGG	+	chr2.3:54111866-54111885	MS.gene58630:CDS	25.0%
!	TGATACCAACAAAAATTGAT+AGG	-	chr2.3:54111241-54111260	None:intergenic	25.0%
!!	AACAATCTTTTAATCTCATG+GGG	+	chr2.3:54111272-54111291	MS.gene58630:CDS	25.0%
!!	ATTGATAGGGTTAACATTTT+TGG	-	chr2.3:54111227-54111246	None:intergenic	25.0%
!!	ATTTTTGTTGGTATCATGTT+AGG	+	chr2.3:54111245-54111264	MS.gene58630:CDS	25.0%
!!	GGATTTTGTTCTTATGTTTA+TGG	+	chr2.3:54111926-54111945	MS.gene58630:CDS	25.0%
!!	TTAACCCTATCAATTTTTGT+TGG	+	chr2.3:54111233-54111252	MS.gene58630:CDS	25.0%
!!	TTTTTGTTGGTATCATGTTA+GGG	+	chr2.3:54111246-54111265	MS.gene58630:CDS	25.0%
!!!	TCTTTTTTTGTTAGTCCTTT+TGG	-	chr2.3:54111473-54111492	None:intergenic	25.0%
	AAAATTGGGATGATTAAGAG+AGG	-	chr2.3:54111152-54111171	None:intergenic	30.0%
	AAATTGGGATGATTAAGAGA+GGG	-	chr2.3:54111151-54111170	None:intergenic	30.0%
	AGAGGTAGTTGATTATCAAA+AGG	-	chr2.3:54111025-54111044	None:intergenic	30.0%
	AGGTAGTTGATTATCAAAAG+GGG	-	chr2.3:54111023-54111042	None:intergenic	30.0%
	ATAAGGGAAGTAGAGTTTAT+TGG	+	chr2.3:54111708-54111727	MS.gene58630:CDS	30.0%
	GAGGTAGTTGATTATCAAAA+GGG	-	chr2.3:54111024-54111043	None:intergenic	30.0%
	GTTTATAGAGATGAATTTGG+TGG	+	chr2.3:54111869-54111888	MS.gene58630:CDS	30.0%
	TAAGGGAAGTAGAGTTTATT+GGG	+	chr2.3:54111709-54111728	MS.gene58630:CDS	30.0%
	TGGTATGTATGTTAAGATGT+TGG	+	chr2.3:54111946-54111965	MS.gene58630:CDS	30.0%
	TTAAGATGTTGGAAGAGAAA+GGG	+	chr2.3:54111957-54111976	MS.gene58630:CDS	30.0%
	TTATAAACCTTCTCCATAAC+TGG	-	chr2.3:54111554-54111573	None:intergenic	30.0%
	TTATTGTTACGAAATGGTGA+TGG	+	chr2.3:54111580-54111599	MS.gene58630:CDS	30.0%
	TTATTTACCAGTTATGGAGA+AGG	+	chr2.3:54111544-54111563	MS.gene58630:CDS	30.0%
	TTCTTGACATCTTCATTAAC+TGG	+	chr2.3:54111794-54111813	MS.gene58630:CDS	30.0%
	TTGTTGTCTATGAATGTGTT+GGG	+	chr2.3:54111836-54111855	MS.gene58630:CDS	30.0%
!	ATTTTTGATCATTTGCATGC+AGG	-	chr2.3:54110977-54110996	None:intergenic	30.0%
!	TGCACTTTATTTACCAGTTA+TGG	+	chr2.3:54111538-54111557	MS.gene58630:CDS	30.0%
!	TGTTTCTTCTTGATGATCAA+TGG	-	chr2.3:54110907-54110926	None:intergenic	30.0%
!	TTCAACTGTTTTGTGTATGT+GGG	+	chr2.3:54111904-54111923	MS.gene58630:CDS	30.0%
!	TTTCAACTGTTTTGTGTATG+TGG	+	chr2.3:54111903-54111922	MS.gene58630:CDS	30.0%
!	TTTGTTGTCTATGAATGTGT+TGG	+	chr2.3:54111835-54111854	MS.gene58630:CDS	30.0%
!!	GATCTTTTGTTTCACTATGA+TGG	-	chr2.3:54111372-54111391	None:intergenic	30.0%
!!!	TGGTTTTTGTTGTTGACAAA+TGG	-	chr2.3:54110954-54110973	None:intergenic	30.0%
	AACTACCTCTTACTCTTTGT+TGG	+	chr2.3:54111035-54111054	MS.gene58630:intron	35.0%
	AAGTAGAGTTTATTGGGTGA+CGG	+	chr2.3:54111715-54111734	MS.gene58630:CDS	35.0%
	AGAAATGAAGAGAGAAAGTG+AGG	+	chr2.3:54111676-54111695	MS.gene58630:CDS	35.0%
	AGGAGATAAGGGAGAAAAAT+TGG	-	chr2.3:54111167-54111186	None:intergenic	35.0%
	GATGGAAATGCAGCTTATAA+TGG	+	chr2.3:54111598-54111617	MS.gene58630:CDS	35.0%
	GGAGATAAGGGAGAAAAATT+GGG	-	chr2.3:54111166-54111185	None:intergenic	35.0%
	GTTAAGATGTTGGAAGAGAA+AGG	+	chr2.3:54111956-54111975	MS.gene58630:CDS	35.0%
	TGACATCTTCATTAACTGGT+GGG	+	chr2.3:54111798-54111817	MS.gene58630:CDS	35.0%
	TTGAACCAACAAAGAGTAAG+AGG	-	chr2.3:54111043-54111062	None:intergenic	35.0%
	TTGACATCTTCATTAACTGG+TGG	+	chr2.3:54111797-54111816	MS.gene58630:CDS	35.0%
	TTGAGTACTATGAGAAGAAG+TGG	+	chr2.3:54112016-54112035	MS.gene58630:CDS	35.0%
	TTGGTGTGAAATCAGTGAAA+GGG	-	chr2.3:54111208-54111227	None:intergenic	35.0%
!	AAGTGAGGAGGTTTTTGATA+AGG	+	chr2.3:54111691-54111710	MS.gene58630:CDS	35.0%
!	AGTGAGGAGGTTTTTGATAA+GGG	+	chr2.3:54111692-54111711	MS.gene58630:CDS	35.0%
!	ATCAGTGAAAGGGTTTCTTT+TGG	-	chr2.3:54111198-54111217	None:intergenic	35.0%
!	TCAACTGTTTTGTGTATGTG+GGG	+	chr2.3:54111905-54111924	MS.gene58630:CDS	35.0%
!	TTGTTGTTGACAAATGGTGA+TGG	-	chr2.3:54110948-54110967	None:intergenic	35.0%
!	TTTGGTGTGAAATCAGTGAA+AGG	-	chr2.3:54111209-54111228	None:intergenic	35.0%
!!	AAAAGTGCTGAAGTTGAAAC+AGG	-	chr2.3:54111311-54111330	None:intergenic	35.0%
!!	CATGTACCTTTTGTTTGTGA+TGG	-	chr2.3:54111000-54111019	None:intergenic	35.0%
!!!	ACGTGGCAGTTTTGTTTTAT+GGG	+	chr2.3:54111755-54111774	MS.gene58630:CDS	35.0%
	AAATAACAACCCTGCACCAA+GGG	-	chr2.3:54111519-54111538	None:intergenic	40.0%
	AAGCAAATGGGTCTCTACTT+GGG	+	chr2.3:54111109-54111128	MS.gene58630:CDS	40.0%
	AAGGGAAGATCGTTAAGGAA+AGG	+	chr2.3:54111975-54111994	MS.gene58630:CDS	40.0%
	AATGAAGAGAGAAAGTGAGG+AGG	+	chr2.3:54111679-54111698	MS.gene58630:CDS	40.0%
	AGAGAAAGGGAAGATCGTTA+AGG	+	chr2.3:54111970-54111989	MS.gene58630:CDS	40.0%
	AGTACTATGAGAAGAAGTGG+AGG	+	chr2.3:54112019-54112038	MS.gene58630:CDS	40.0%
	CCACAAAGGTTCAAGCAAAT+GGG	+	chr2.3:54111097-54111116	MS.gene58630:intron	40.0%
	GGAAAGGAATGATTCTTCCA+TGG	+	chr2.3:54111991-54112010	MS.gene58630:CDS	40.0%
	TCCACAAAGGTTCAAGCAAA+TGG	+	chr2.3:54111096-54111115	MS.gene58630:intron	40.0%
	TCTAGTAGTGAGAGACCAAA+AGG	+	chr2.3:54111455-54111474	MS.gene58630:CDS	40.0%
	TCTCATAGTACTCAACTCCA+TGG	-	chr2.3:54112011-54112030	None:intergenic	40.0%
	TGGTGAGATTGAGGAGATAA+GGG	-	chr2.3:54111178-54111197	None:intergenic	40.0%
	TTGGTGAGATTGAGGAGATA+AGG	-	chr2.3:54111179-54111198	None:intergenic	40.0%
	TTGTCTATGAATGTGTTGGG+TGG	+	chr2.3:54111839-54111858	MS.gene58630:CDS	40.0%
	TTTGATCATTTGCATGCAGG+TGG	-	chr2.3:54110974-54110993	None:intergenic	40.0%
!	AGTTTATTGGGTGACGGTTA+TGG	+	chr2.3:54111721-54111740	MS.gene58630:CDS	40.0%
!	ATTGGATTCTTTTGCACCCT+TGG	+	chr2.3:54111500-54111519	MS.gene58630:CDS	40.0%
!	GGTTTCTTTTGGTGAGATTG+AGG	-	chr2.3:54111187-54111206	None:intergenic	40.0%
!	TATAATGGAGATTGCAGCGA+CGG	+	chr2.3:54111613-54111632	MS.gene58630:CDS	40.0%
!!!	CGTGGCAGTTTTGTTTTATG+GGG	+	chr2.3:54111756-54111775	MS.gene58630:CDS	40.0%
!!!	GACGTGGCAGTTTTGTTTTA+TGG	+	chr2.3:54111754-54111773	MS.gene58630:CDS	40.0%
!!!	TTTGTTTTATGGGGACTGCT+GGG	+	chr2.3:54111765-54111784	MS.gene58630:CDS	40.0%
!!!	TTTTGTTTTATGGGGACTGC+TGG	+	chr2.3:54111764-54111783	MS.gene58630:CDS	40.0%
	CAAATAACAACCCTGCACCA+AGG	-	chr2.3:54111520-54111539	None:intergenic	45.0%
	CAAGCAAATGGGTCTCTACT+TGG	+	chr2.3:54111108-54111127	MS.gene58630:CDS	45.0%
	CCCATTTGCTTGAACCTTTG+TGG	-	chr2.3:54111100-54111119	None:intergenic	45.0%
	TCTACTTGGGTTCAATGTGC+TGG	+	chr2.3:54111122-54111141	MS.gene58630:CDS	45.0%
	TTATGGCGAATGTCGTGACG+TGG	+	chr2.3:54111738-54111757	MS.gene58630:CDS	50.0%
!	TTTTATGGGGACTGCTGGGA+TGG	+	chr2.3:54111769-54111788	MS.gene58630:CDS	50.0%
!!	GGTTTTAGCGACAGTGGGAA+TGG	+	chr2.3:54111634-54111653	MS.gene58630:CDS	50.0%
!!	TCTTTTGCACCCTTGGTGCA+GGG	+	chr2.3:54111507-54111526	MS.gene58630:CDS	50.0%
!!	TTCTTTTGCACCCTTGGTGC+AGG	+	chr2.3:54111506-54111525	MS.gene58630:CDS	50.0%
!	AGAAGAAGTGGAGGTGCAGC+TGG	+	chr2.3:54112028-54112047	MS.gene58630:CDS	55.0%
!!	AGCGACGGTTTTAGCGACAG+TGG	+	chr2.3:54111628-54111647	MS.gene58630:CDS	55.0%
!!	GCGACGGTTTTAGCGACAGT+GGG	+	chr2.3:54111629-54111648	MS.gene58630:CDS	55.0%
	ACAGTGGGAATGGCGTGGGA+CGG	+	chr2.3:54111644-54111663	MS.gene58630:CDS	60.0%
	AGCGACAGTGGGAATGGCGT+GGG	+	chr2.3:54111640-54111659	MS.gene58630:CDS	60.0%
	TAGCGACAGTGGGAATGGCG+TGG	+	chr2.3:54111639-54111658	MS.gene58630:CDS	60.0%
	GTGGGAATGGCGTGGGACGG+CGG	+	chr2.3:54111647-54111666	MS.gene58630:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	54110880	54112054	54110880	ID=MS.gene58630
chr2.3	mRNA	54110880	54112054	54110880	ID=MS.gene58630.t1;Parent=MS.gene58630
chr2.3	exon	54110880	54111012	54110880	ID=MS.gene58630.t1.exon1;Parent=MS.gene58630.t1
chr2.3	CDS	54110880	54111012	54110880	ID=cds.MS.gene58630.t1;Parent=MS.gene58630.t1
chr2.3	exon	54111105	54112054	54111105	ID=MS.gene58630.t1.exon2;Parent=MS.gene58630.t1
chr2.3	CDS	54111105	54112054	54111105	ID=cds.MS.gene58630.t1;Parent=MS.gene58630.t1

Gene Sequence

>MS.gene58630

ATGAAGATACAATTGACATTGAAGCCATTGATCATCAAGAAGAAACACAAAAACATCAAAATCAACCATCACCATTTGTCAACAACAAAAACCACCTGCATGCAAATGATCAAAAATCCATCACAAACAAAAGGTACATGCCCCTTTTGATAATCAACTACCTCTTACTCTTTGTTGGTTCAATCTCATCAAGTTTACTCTCAAAATACTATTTCATCCACAAAGGTTCAAGCAAATGGGTCTCTACTTGGGTTCAATGTGCTGGCTTCCCTCTCTTAATCATCCCAATTTTTCTCCCTTATCTCCTCAATCTCACCAAAAGAAACCCTTTCACTGATTTCACACCAAAAATGTTAACCCTATCAATTTTTGTTGGTATCATGTTAGGGTTTAACAATCTTTTAATCTCATGGGGTGTTGCATATCTACCTGTTTCAACTTCAGCACTTTTACTATCATCACAGCTTGTTTTTAATCTCATTCTCTCAGCCATCATAGTGAAACAAAAGATCACTTTTTCAAATCTCAATTGTGTTATTCTTCTCACATTGAGTTCAATCATTCTTGCATTGAATTCTAGTAGTGAGAGACCAAAAGGACTAACAAAAAAAGAATACTTTATTGGATTCTTTTGCACCCTTGGTGCAGGGTTGTTATTTGCACTTTATTTACCAGTTATGGAGAAGGTTTATAAAAAAGTTTATTGTTACGAAATGGTGATGGAAATGCAGCTTATAATGGAGATTGCAGCGACGGTTTTAGCGACAGTGGGAATGGCGTGGGACGGCGGATTTAAAGAAATGAAGAGAGAAAGTGAGGAGGTTTTTGATAAGGGAAGTAGAGTTTATTGGGTGACGGTTATGGCGAATGTCGTGACGTGGCAGTTTTGTTTTATGGGGACTGCTGGGATGGTTTTCTTGACATCTTCATTAACTGGTGGGATTTGTATGACAGCTTTGTTGTCTATGAATGTGTTGGGTGGTGTTGTTGTTTATAGAGATGAATTTGGTGGTTTGAAAGCTGTTTCAACTGTTTTGTGTATGTGGGGATTTTGTTCTTATGTTTATGGTATGTATGTTAAGATGTTGGAAGAGAAAGGGAAGATCGTTAAGGAAAGGAATGATTCTTCCATGGAGTTGAGTACTATGAGAAGAAGTGGAGGTGCAGCTGGTTGA

Protein sequence

>MS.gene58630.t1

MKIQLTLKPLIIKKKHKNIKINHHHLSTTKTTCMQMIKNPSQTKGSSKWVSTWVQCAGFPLLIIPIFLPYLLNLTKRNPFTDFTPKMLTLSIFVGIMLGFNNLLISWGVAYLPVSTSALLLSSQLVFNLILSAIIVKQKITFSNLNCVILLTLSSIILALNSSSERPKGLTKKEYFIGFFCTLGAGLLFALYLPVMEKVYKKVYCYEMVMEMQLIMEIAATVLATVGMAWDGGFKEMKRESEEVFDKGSRVYWVTVMANVVTWQFCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVVVYRDEFGGLKAVSTVLCMWGFCSYVYGMYVKMLEEKGKIVKERNDSSMELSTMRRSGGAAG