Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072506.t1 | XP_003626230.2 | 98.4 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 8.40E-183 | 649.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072506.t1 | P48490 | 90.1 | 313 | 30 | 1 | 5 | 317 | 1 | 312 | 1.1e-170 | 600.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072506.t1 | G7KXK9 | 98.4 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 6.1e-183 | 649.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050914 | MS.gene072506 | 0.968766 | 3.80E-129 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048874 | MS.gene072506 | PPI |
| MS.gene23125 | MS.gene072506 | PPI |
| MS.gene55750 | MS.gene072506 | PPI |
| MS.gene072506 | MS.gene93729 | PPI |
| MS.gene072506 | MS.gene29552 | PPI |
| MS.gene63929 | MS.gene072506 | PPI |
| MS.gene046213 | MS.gene072506 | PPI |
| MS.gene55751 | MS.gene072506 | PPI |
| MS.gene88462 | MS.gene072506 | PPI |
| MS.gene072506 | MS.gene49664 | PPI |
| MS.gene99972 | MS.gene072506 | PPI |
| MS.gene072506 | MS.gene007026 | PPI |
| MS.gene072506 | MS.gene32487 | PPI |
| MS.gene23035 | MS.gene072506 | PPI |
| MS.gene050914 | MS.gene072506 | PPI |
| MS.gene032713 | MS.gene072506 | PPI |
| MS.gene039628 | MS.gene072506 | PPI |
| MS.gene61079 | MS.gene072506 | PPI |
| MS.gene072506 | MS.gene63084 | PPI |
| MS.gene50106 | MS.gene072506 | PPI |
| MS.gene072506 | MS.gene25326 | PPI |
| MS.gene58553 | MS.gene072506 | PPI |
| MS.gene89706 | MS.gene072506 | PPI |
| MS.gene06018 | MS.gene072506 | PPI |
| MS.gene058508 | MS.gene072506 | PPI |
| MS.gene000895 | MS.gene072506 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072506.t1 | MTR_7g112870 | 98.423 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 0.0 | 640 |
| MS.gene072506.t1 | MTR_1g079950 | 75.235 | 319 | 73 | 2 | 1 | 313 | 26 | 344 | 0.0 | 506 |
| MS.gene072506.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 3.00e-180 | 501 |
| MS.gene072506.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 4.22e-180 | 500 |
| MS.gene072506.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 9.36e-180 | 499 |
| MS.gene072506.t1 | MTR_7g116380 | 74.921 | 315 | 73 | 2 | 5 | 313 | 1 | 315 | 1.29e-177 | 494 |
| MS.gene072506.t1 | MTR_7g116380 | 74.921 | 315 | 73 | 2 | 5 | 313 | 1 | 315 | 1.90e-177 | 494 |
| MS.gene072506.t1 | MTR_8g098980 | 72.500 | 320 | 79 | 3 | 5 | 317 | 1 | 318 | 3.94e-177 | 493 |
| MS.gene072506.t1 | MTR_5g081230 | 76.923 | 299 | 66 | 1 | 5 | 300 | 17 | 315 | 5.71e-172 | 479 |
| MS.gene072506.t1 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 4.36e-171 | 478 |
| MS.gene072506.t1 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 8.44e-171 | 476 |
| MS.gene072506.t1 | MTR_1g043240 | 71.565 | 313 | 83 | 3 | 5 | 312 | 1 | 312 | 7.32e-169 | 472 |
| MS.gene072506.t1 | MTR_8g005010 | 74.048 | 289 | 73 | 1 | 10 | 296 | 4 | 292 | 7.08e-165 | 461 |
| MS.gene072506.t1 | MTR_1g079950 | 79.116 | 249 | 48 | 1 | 62 | 306 | 34 | 282 | 9.16e-151 | 426 |
| MS.gene072506.t1 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 1.91e-145 | 410 |
| MS.gene072506.t1 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 3.39e-145 | 409 |
| MS.gene072506.t1 | MTR_8g062430 | 46.154 | 299 | 154 | 3 | 10 | 307 | 7 | 299 | 1.23e-95 | 285 |
| MS.gene072506.t1 | MTR_7g107310 | 46.392 | 291 | 149 | 3 | 10 | 299 | 14 | 298 | 1.64e-94 | 283 |
| MS.gene072506.t1 | MTR_5g037200 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 2.02e-94 | 282 |
| MS.gene072506.t1 | MTR_5g093990 | 47.331 | 281 | 147 | 1 | 28 | 307 | 17 | 297 | 3.70e-93 | 279 |
| MS.gene072506.t1 | MTR_8g085610 | 46.392 | 291 | 149 | 3 | 10 | 299 | 9 | 293 | 3.90e-93 | 279 |
| MS.gene072506.t1 | MTR_8g085610 | 46.840 | 269 | 141 | 2 | 32 | 299 | 2 | 269 | 7.62e-90 | 270 |
| MS.gene072506.t1 | MTR_1g039380 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 7.21e-88 | 265 |
| MS.gene072506.t1 | MTR_1g039380 | 46.400 | 250 | 131 | 3 | 40 | 287 | 4 | 252 | 6.96e-85 | 257 |
| MS.gene072506.t1 | MTR_2g087530 | 47.078 | 308 | 144 | 6 | 8 | 296 | 639 | 946 | 5.09e-80 | 262 |
| MS.gene072506.t1 | MTR_1g089370 | 43.068 | 339 | 164 | 8 | 5 | 315 | 524 | 861 | 1.22e-79 | 259 |
| MS.gene072506.t1 | MTR_4g050540 | 46.926 | 309 | 145 | 6 | 7 | 296 | 643 | 951 | 3.47e-79 | 259 |
| MS.gene072506.t1 | MTR_2g087530 | 45.625 | 320 | 155 | 6 | 7 | 307 | 525 | 844 | 1.91e-78 | 256 |
| MS.gene072506.t1 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 169 | 446 | 2.38e-71 | 229 |
| MS.gene072506.t1 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 236 | 513 | 1.30e-70 | 228 |
| MS.gene072506.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 87 | 365 | 2.41e-68 | 219 |
| MS.gene072506.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 186 | 464 | 2.27e-67 | 219 |
| MS.gene072506.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 196 | 474 | 3.11e-67 | 219 |
| MS.gene072506.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 157 | 435 | 3.52e-67 | 218 |
| MS.gene072506.t1 | MTR_2g100130 | 38.889 | 306 | 167 | 7 | 8 | 295 | 196 | 499 | 3.56e-67 | 219 |
| MS.gene072506.t1 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 157 | 459 | 7.43e-66 | 214 |
| MS.gene072506.t1 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 196 | 498 | 8.68e-66 | 215 |
| MS.gene072506.t1 | MTR_2g100130 | 41.111 | 270 | 150 | 6 | 8 | 270 | 196 | 463 | 9.35e-66 | 214 |
| MS.gene072506.t1 | MTR_2g100160 | 37.829 | 304 | 176 | 7 | 6 | 298 | 104 | 405 | 6.12e-61 | 200 |
| MS.gene072506.t1 | MTR_5g037200 | 49.730 | 185 | 87 | 2 | 10 | 193 | 7 | 186 | 8.71e-60 | 191 |
| MS.gene072506.t1 | MTR_8g072600 | 30.938 | 320 | 155 | 11 | 42 | 299 | 119 | 434 | 1.96e-34 | 130 |
| MS.gene072506.t1 | MTR_8g072600 | 32.900 | 231 | 115 | 7 | 42 | 236 | 119 | 345 | 2.64e-28 | 112 |
| MS.gene072506.t1 | MTR_2g099710 | 30.417 | 240 | 126 | 9 | 61 | 270 | 244 | 472 | 1.46e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072506.t1 | AT5G27840 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MS.gene072506.t1 | AT3G05580 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MS.gene072506.t1 | AT5G27840 | 87.742 | 310 | 38 | 0 | 1 | 310 | 5 | 314 | 0.0 | 567 |
| MS.gene072506.t1 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MS.gene072506.t1 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MS.gene072506.t1 | AT3G46820 | 75.166 | 302 | 71 | 1 | 2 | 299 | 6 | 307 | 7.12e-174 | 484 |
| MS.gene072506.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.61e-174 | 484 |
| MS.gene072506.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.61e-174 | 484 |
| MS.gene072506.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.61e-174 | 484 |
| MS.gene072506.t1 | AT2G39840 | 76.254 | 299 | 68 | 1 | 5 | 300 | 14 | 312 | 1.28e-173 | 484 |
| MS.gene072506.t1 | AT2G29400 | 75.083 | 301 | 69 | 2 | 5 | 300 | 15 | 314 | 1.03e-172 | 481 |
| MS.gene072506.t1 | AT1G64040 | 72.013 | 318 | 84 | 2 | 5 | 317 | 1 | 318 | 1.37e-172 | 481 |
| MS.gene072506.t1 | AT4G11240 | 69.811 | 318 | 91 | 2 | 5 | 317 | 1 | 318 | 1.83e-169 | 473 |
| MS.gene072506.t1 | AT3G05580 | 89.516 | 248 | 26 | 0 | 1 | 248 | 5 | 252 | 1.76e-168 | 468 |
| MS.gene072506.t1 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 1.51e-166 | 466 |
| MS.gene072506.t1 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 3.21e-166 | 465 |
| MS.gene072506.t1 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 6.99e-166 | 464 |
| MS.gene072506.t1 | AT2G42500 | 47.635 | 296 | 147 | 4 | 6 | 299 | 9 | 298 | 8.97e-97 | 288 |
| MS.gene072506.t1 | AT5G55260 | 47.405 | 289 | 146 | 2 | 28 | 315 | 17 | 300 | 4.85e-96 | 286 |
| MS.gene072506.t1 | AT3G58500 | 47.079 | 291 | 147 | 3 | 10 | 299 | 14 | 298 | 1.95e-95 | 285 |
| MS.gene072506.t1 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 1.31e-94 | 283 |
| MS.gene072506.t1 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 1.31e-94 | 283 |
| MS.gene072506.t1 | AT1G69960 | 45.485 | 299 | 156 | 3 | 10 | 307 | 8 | 300 | 1.82e-94 | 282 |
| MS.gene072506.t1 | AT1G59830 | 45.485 | 299 | 156 | 3 | 10 | 307 | 7 | 299 | 8.11e-93 | 278 |
| MS.gene072506.t1 | AT4G26720 | 45.985 | 274 | 147 | 1 | 28 | 300 | 17 | 290 | 9.76e-93 | 278 |
| MS.gene072506.t1 | AT5G55260 | 41.515 | 330 | 146 | 3 | 28 | 315 | 17 | 341 | 1.28e-87 | 266 |
| MS.gene072506.t1 | AT3G19980 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 2.44e-87 | 264 |
| MS.gene072506.t1 | AT1G50370 | 44.286 | 280 | 148 | 4 | 10 | 287 | 3 | 276 | 2.50e-87 | 264 |
| MS.gene072506.t1 | AT1G59830 | 48.988 | 247 | 119 | 3 | 10 | 255 | 7 | 247 | 1.22e-81 | 248 |
| MS.gene072506.t1 | AT4G03080 | 45.779 | 308 | 150 | 7 | 5 | 296 | 526 | 832 | 1.72e-79 | 259 |
| MS.gene072506.t1 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 644 | 982 | 1.42e-77 | 255 |
| MS.gene072506.t1 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 649 | 987 | 1.49e-77 | 255 |
| MS.gene072506.t1 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 655 | 974 | 1.14e-76 | 253 |
| MS.gene072506.t1 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 660 | 979 | 1.18e-76 | 253 |
| MS.gene072506.t1 | AT1G03445 | 40.356 | 337 | 174 | 9 | 4 | 315 | 451 | 785 | 1.64e-76 | 249 |
| MS.gene072506.t1 | AT2G42500 | 50.455 | 220 | 107 | 2 | 81 | 299 | 33 | 251 | 2.57e-76 | 234 |
| MS.gene072506.t1 | AT1G03445 | 41.956 | 317 | 166 | 8 | 4 | 304 | 451 | 765 | 3.91e-76 | 248 |
| MS.gene072506.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.20e-69 | 224 |
| MS.gene072506.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.20e-69 | 224 |
| MS.gene072506.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.20e-69 | 224 |
| MS.gene072506.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 220 | 501 | 6.73e-69 | 224 |
| MS.gene072506.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 221 | 502 | 7.41e-69 | 224 |
| MS.gene072506.t1 | AT2G42500 | 45.882 | 170 | 82 | 4 | 6 | 170 | 9 | 173 | 3.62e-46 | 154 |
| MS.gene072506.t1 | AT2G42500 | 45.763 | 177 | 84 | 5 | 6 | 177 | 9 | 178 | 4.65e-46 | 154 |
| MS.gene072506.t1 | AT2G42500 | 47.531 | 162 | 75 | 4 | 6 | 162 | 9 | 165 | 3.16e-45 | 152 |
| MS.gene072506.t1 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.44e-37 | 138 |
| MS.gene072506.t1 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.44e-37 | 138 |
| MS.gene072506.t1 | AT5G63870 | 34.513 | 226 | 113 | 5 | 51 | 241 | 73 | 298 | 2.97e-31 | 119 |
| MS.gene072506.t1 | AT1G48120 | 30.537 | 298 | 143 | 8 | 35 | 270 | 630 | 925 | 1.34e-26 | 110 |
| MS.gene072506.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 6.32e-21 | 93.6 |
| MS.gene072506.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 7.09e-21 | 93.6 |
| MS.gene072506.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 8.11e-21 | 93.2 |
Find 70 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTCCCCGCCATAATT+TGG | 0.189229 | 7.3:+3949811 | None:intergenic |
| AAACCTGCTGATAAAGAATT+TGG | 0.231736 | 7.3:-3949730 | MS.gene072506:CDS |
| CGAGGTGTTTCGTGTACTTT+TGG | 0.244051 | 7.3:-3950646 | MS.gene072506:CDS |
| GCTGCAAATTACTTGTTTCT+TGG | 0.257569 | 7.3:-3951057 | MS.gene072506:CDS |
| ATATTCTCTGCCCCAAATTA+TGG | 0.268724 | 7.3:-3949823 | MS.gene072506:CDS |
| CAAATTCCCCGCCATAATTT+GGG | 0.269829 | 7.3:+3949812 | None:intergenic |
| GGTTTATCTTTGCATCTTCA+TGG | 0.299589 | 7.3:+3950935 | None:intergenic |
| GGAGACTATATGCTTGCTTT+TGG | 0.332948 | 7.3:-3951004 | MS.gene072506:CDS |
| ATGATCTTGATCTTATTTGC+AGG | 0.336140 | 7.3:-3950591 | MS.gene072506:CDS |
| GTCTCTTGTGCGATCTGCTT+TGG | 0.337128 | 7.3:-3950711 | MS.gene072506:CDS |
| GAGACCGCTGTCTGGAATTT+CGG | 0.338263 | 7.3:+3950729 | None:intergenic |
| GCAAAGATAAACCGAATATA+TGG | 0.352537 | 7.3:-3950925 | MS.gene072506:CDS |
| GATAGAGTTTATCTCTTAAG+AGG | 0.369598 | 7.3:-3950961 | MS.gene072506:CDS |
| AGACAGAGGGAAGCAAAGTT+TGG | 0.370499 | 7.3:-3951025 | MS.gene072506:CDS |
| CGATTGCTTTAACTGTTTGC+CGG | 0.396470 | 7.3:-3950848 | MS.gene072506:CDS |
| AAGAAGATTGTTAGAAGGAA+AGG | 0.405161 | 7.3:-3952105 | MS.gene072506:CDS |
| TGATCCTAACGCTGAGGGTT+GGG | 0.411650 | 7.3:-3950680 | MS.gene072506:CDS |
| TCTTATTTGCAGGGGTCATC+AGG | 0.413370 | 7.3:-3950581 | MS.gene072506:intron |
| GTAAAAGGAGGTTCAATGTT+AGG | 0.413611 | 7.3:-3950888 | MS.gene072506:CDS |
| TTCTTATAGGTTGTGGAGGA+TGG | 0.418589 | 7.3:-3949880 | MS.gene072506:intron |
| GGCCTACAAAATAAGATATC+CGG | 0.419399 | 7.3:-3950983 | MS.gene072506:CDS |
| AACGACAATGGAAGGAGAAA+TGG | 0.424864 | 7.3:-3952153 | None:intergenic |
| GTGATAAGAAGATTGTTAGA+AGG | 0.438726 | 7.3:-3952110 | MS.gene072506:CDS |
| CTTCCAAATTCTTTATCAGC+AGG | 0.440807 | 7.3:+3949727 | None:intergenic |
| CGTGCTCCCATCCGCATTTG+CGG | 0.444802 | 7.3:-3951987 | MS.gene072506:intron |
| CTTAAGAGATAAACTCTATC+CGG | 0.451063 | 7.3:+3950964 | None:intergenic |
| GACTAGATCTATCCCTGTGC+AGG | 0.453447 | 7.3:+3949577 | None:intergenic |
| CAACCCTCAGCGTTAGGATC+AGG | 0.455754 | 7.3:+3950682 | None:intergenic |
| CTGCATGCAGGTGATATTCA+TGG | 0.458163 | 7.3:-3951129 | MS.gene072506:intron |
| TCGCACAAGAGACCGCTGTC+TGG | 0.467988 | 7.3:+3950721 | None:intergenic |
| TCTGCCCAACCCTCAGCGTT+AGG | 0.475726 | 7.3:+3950676 | None:intergenic |
| GCACGAAGATCGAGAAGAAT+AGG | 0.484459 | 7.3:+3952005 | None:intergenic |
| CGAGAAGAATAGGTTGAGAG+AGG | 0.490202 | 7.3:+3952015 | None:intergenic |
| AGAAGATTGTTAGAAGGAAA+GGG | 0.491790 | 7.3:-3952104 | MS.gene072506:CDS |
| GGAGGTTCAATGTTAGGCTA+TGG | 0.496598 | 7.3:-3950882 | MS.gene072506:CDS |
| CGGCAAACAGTTAAAGCAAT+CGG | 0.514394 | 7.3:+3950849 | None:intergenic |
| TGATCTTGATCTTATTTGCA+GGG | 0.521526 | 7.3:-3950590 | MS.gene072506:CDS |
| GGAAGGAGAAATGGACAAAA+CGG | 0.528497 | 7.3:-3952144 | MS.gene072506:CDS |
| CTGATCCTAACGCTGAGGGT+TGG | 0.537776 | 7.3:-3950681 | MS.gene072506:CDS |
| TACTAACCGCAAATGCGGAT+GGG | 0.543656 | 7.3:+3951981 | None:intergenic |
| AGAAACAAGTAATTTGCAGC+TGG | 0.546090 | 7.3:+3951060 | None:intergenic |
| GGCATAGGAACGACAATGGA+AGG | 0.548710 | 7.3:-3952161 | None:intergenic |
| TAGATCTATCCCTGTGCAGG+GGG | 0.550107 | 7.3:+3949580 | None:intergenic |
| TCTCTGCCCCAAATTATGGC+GGG | 0.558401 | 7.3:-3949819 | MS.gene072506:CDS |
| AACAAGTAATTTGCAGCTGG+AGG | 0.567978 | 7.3:+3951063 | None:intergenic |
| CCGCTGTCTGGAATTTCGGT+AGG | 0.569213 | 7.3:+3950733 | None:intergenic |
| TCATCAATGAGTGCAGCTAC+CGG | 0.570663 | 7.3:+3950829 | None:intergenic |
| GAGAAAATACTTTGTATGCA+TGG | 0.574695 | 7.3:-3950808 | MS.gene072506:CDS |
| TTGGTGATTATGTAGACAGA+GGG | 0.580074 | 7.3:-3951038 | MS.gene072506:CDS |
| ACTAGATCTATCCCTGTGCA+GGG | 0.580786 | 7.3:+3949578 | None:intergenic |
| CTCTGCCCCAAATTATGGCG+GGG | 0.582113 | 7.3:-3949818 | MS.gene072506:CDS |
| GATCCTGATCCTAACGCTGA+GGG | 0.583668 | 7.3:-3950685 | MS.gene072506:CDS |
| GTACTAACCGCAAATGCGGA+TGG | 0.584337 | 7.3:+3951980 | None:intergenic |
| GGCGGGGAATTTGACAACGC+TGG | 0.591736 | 7.3:-3949802 | MS.gene072506:CDS |
| AGATTGTTAGAAGGAAAGGG+AGG | 0.602378 | 7.3:-3952101 | MS.gene072506:CDS |
| TTCTCTGCCCCAAATTATGG+CGG | 0.611120 | 7.3:-3949820 | MS.gene072506:CDS |
| TTTACGATGAATGTAAAAGG+AGG | 0.613144 | 7.3:-3950900 | MS.gene072506:CDS |
| ACAAGTAATTTGCAGCTGGA+GGG | 0.614880 | 7.3:+3951064 | None:intergenic |
| CTTGGTGATTATGTAGACAG+AGG | 0.622438 | 7.3:-3951039 | MS.gene072506:CDS |
| ATCAGATAAGAGAGGTTACG+AGG | 0.624724 | 7.3:-3950756 | MS.gene072506:CDS |
| AAAAGTACTAACCGCAAATG+CGG | 0.624956 | 7.3:+3951976 | None:intergenic |
| TGATCCTGATCCTAACGCTG+AGG | 0.628710 | 7.3:-3950686 | MS.gene072506:CDS |
| AAATTCCCCGCCATAATTTG+GGG | 0.631186 | 7.3:+3949813 | None:intergenic |
| GATCTTGATCTTATTTGCAG+GGG | 0.650810 | 7.3:-3950589 | MS.gene072506:CDS |
| CTAGATCTATCCCTGTGCAG+GGG | 0.653548 | 7.3:+3949579 | None:intergenic |
| CAAAAGTACACGAAACACCT+CGG | 0.655383 | 7.3:+3950647 | None:intergenic |
| AAATTTAGATCAGATAAGAG+AGG | 0.664730 | 7.3:-3950764 | MS.gene072506:CDS |
| GGTTGGGCAGATAGTGACCG+AGG | 0.706364 | 7.3:-3950664 | MS.gene072506:CDS |
| AAAATACTTTGTATGCATGG+AGG | 0.710478 | 7.3:-3950805 | MS.gene072506:CDS |
| CCTACCGAAATTCCAGACAG+CGG | 0.761713 | 7.3:-3950733 | MS.gene072506:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATTTACTAAAAGT+TGG | - | chr7.3:3950324-3950343 | MS.gene072506:intron | 10.0% |
| !! | TCAAAAAAAAAAAAAAAAGT+TGG | - | chr7.3:3950359-3950378 | MS.gene072506:intron | 10.0% |
| !!! | CTATTTTTCAAAAATATATA+CGG | - | chr7.3:3949880-3949899 | MS.gene072506:intron | 10.0% |
| !! | ATATCAACTAATTTCAAAAT+GGG | + | chr7.3:3951317-3951336 | None:intergenic | 15.0% |
| !! | ATTATTCAGTTTCTATTAAA+TGG | + | chr7.3:3950506-3950525 | None:intergenic | 15.0% |
| !! | TATATCAACTAATTTCAAAA+TGG | + | chr7.3:3951318-3951337 | None:intergenic | 15.0% |
| !!! | ATCAAAAATGAATTTTAAGA+AGG | - | chr7.3:3952033-3952052 | MS.gene072506:CDS | 15.0% |
| !!! | GTTTTTACAATTAAGAATAT+TGG | - | chr7.3:3949993-3950012 | MS.gene072506:intron | 15.0% |
| !!! | TGCAATTTTTTTTTTCTTAT+AGG | - | chr7.3:3951838-3951857 | MS.gene072506:intron | 15.0% |
| !! | AAAATATTTAGGAATGAAAC+TGG | - | chr7.3:3951391-3951410 | MS.gene072506:intron | 20.0% |
| !! | AGATAAGAAAGTCAATATAT+TGG | + | chr7.3:3951697-3951716 | None:intergenic | 20.0% |
| !! | TAAAACCTATATCAAACATA+TGG | - | chr7.3:3950290-3950309 | MS.gene072506:intron | 20.0% |
| !! | TTAAGAATATTGGTCATTTA+AGG | - | chr7.3:3950003-3950022 | MS.gene072506:intron | 20.0% |
| !! | TTTAATTCATGATAGATGAA+GGG | + | chr7.3:3950412-3950431 | None:intergenic | 20.0% |
| !!! | AAAAGTAACTAGATGAATTT+TGG | + | chr7.3:3951237-3951256 | None:intergenic | 20.0% |
| !!! | ATGAATTTTGGAAATTATGA+AGG | + | chr7.3:3951225-3951244 | None:intergenic | 20.0% |
| !!! | CATAGTCTTGTATATATATT+TGG | - | chr7.3:3952087-3952106 | MS.gene072506:CDS | 20.0% |
| !!! | TGATCTAAATTTTGTAATTC+AGG | + | chr7.3:3950959-3950978 | None:intergenic | 20.0% |
| !!! | TTATTGAGACTTTTTGAATA+TGG | - | chr7.3:3950638-3950657 | MS.gene072506:CDS | 20.0% |
| !!! | TTTTAAAATATTGCAGATAG+AGG | + | chr7.3:3950458-3950477 | None:intergenic | 20.0% |
| !!! | TTTTAATTCATGATAGATGA+AGG | + | chr7.3:3950413-3950432 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTATAGGTTG+TGG | - | chr7.3:3951844-3951863 | MS.gene072506:intron | 20.0% |
| !!! | TTTTTTTTTTTGAGCAATAC+AGG | + | chr7.3:3950352-3950371 | None:intergenic | 20.0% |
| ! | AAAATATATCACGAAAACCA+AGG | - | chr7.3:3950083-3950102 | MS.gene072506:intron | 25.0% |
| ! | AAATTTAGATCAGATAAGAG+AGG | - | chr7.3:3950967-3950986 | MS.gene072506:CDS | 25.0% |
| ! | CATCGTAAAAACCATATATT+CGG | + | chr7.3:3950820-3950839 | None:intergenic | 25.0% |
| ! | TAATTTAATGACCGTGATAA+AGG | + | chr7.3:3951368-3951387 | None:intergenic | 25.0% |
| ! | TCAAAAATATATACGGAGTT+TGG | - | chr7.3:3949887-3949906 | MS.gene072506:intron | 25.0% |
| ! | TTGAGAATTGTGGTTAAATA+TGG | - | chr7.3:3950199-3950218 | MS.gene072506:intron | 25.0% |
| !! | ATTAGTTGATATACAGTTTG+TGG | - | chr7.3:3951325-3951344 | MS.gene072506:intron | 25.0% |
| !! | GTAAATTTTGTTGAGAATTG+TGG | - | chr7.3:3950189-3950208 | MS.gene072506:intron | 25.0% |
| !! | GTTTTTACGATGAATGTAAA+AGG | - | chr7.3:3950828-3950847 | MS.gene072506:CDS | 25.0% |
| !!! | TTTCTCTCTCTTTGAAATTT+TGG | - | chr7.3:3949790-3949809 | MS.gene072506:CDS | 25.0% |
| AAAATACTTTGTATGCATGG+AGG | - | chr7.3:3950926-3950945 | MS.gene072506:CDS | 30.0% | |
| AAACCTGCTGATAAAGAATT+TGG | - | chr7.3:3952001-3952020 | MS.gene072506:CDS | 30.0% | |
| AAGAAGATTGTTAGAAGGAA+AGG | - | chr7.3:3949626-3949645 | MS.gene072506:intron | 30.0% | |
| AGAAGATTGTTAGAAGGAAA+GGG | - | chr7.3:3949627-3949646 | MS.gene072506:intron | 30.0% | |
| ATGAAACTGGAACAATTAAG+TGG | - | chr7.3:3951404-3951423 | MS.gene072506:intron | 30.0% | |
| CAAAAAGTCTCAATAAGTCT+TGG | + | chr7.3:3950634-3950653 | None:intergenic | 30.0% | |
| CATCAGGAACAACAAAAAAT+AGG | + | chr7.3:3950568-3950587 | None:intergenic | 30.0% | |
| CTTAAGAGATAAACTCTATC+CGG | + | chr7.3:3950770-3950789 | None:intergenic | 30.0% | |
| GAGAAAATACTTTGTATGCA+TGG | - | chr7.3:3950923-3950942 | MS.gene072506:CDS | 30.0% | |
| GATAGAGTTTATCTCTTAAG+AGG | - | chr7.3:3950770-3950789 | MS.gene072506:CDS | 30.0% | |
| GCAAAGATAAACCGAATATA+TGG | - | chr7.3:3950806-3950825 | MS.gene072506:CDS | 30.0% | |
| GTGATAAGAAGATTGTTAGA+AGG | - | chr7.3:3949621-3949640 | MS.gene072506:intron | 30.0% | |
| TCAAAGAGAGAGAAAACAAA+AGG | + | chr7.3:3949785-3949804 | None:intergenic | 30.0% | |
| TCTTGCCATATGTTTGATAT+AGG | + | chr7.3:3950298-3950317 | None:intergenic | 30.0% | |
| TGAAACTGGAACAATTAAGT+GGG | - | chr7.3:3951405-3951424 | MS.gene072506:intron | 30.0% | |
| TTATCATTATGCTCGTATGA+AGG | + | chr7.3:3951186-3951205 | None:intergenic | 30.0% | |
| TTTACGATGAATGTAAAAGG+AGG | - | chr7.3:3950831-3950850 | MS.gene072506:CDS | 30.0% | |
| ! | ATGATCTTGATCTTATTTGC+AGG | - | chr7.3:3951140-3951159 | MS.gene072506:intron | 30.0% |
| ! | TGATCTTGATCTTATTTGCA+GGG | - | chr7.3:3951141-3951160 | MS.gene072506:intron | 30.0% |
| ! | TTGAGACTTTTTGAATATGG+TGG | - | chr7.3:3950641-3950660 | MS.gene072506:CDS | 30.0% |
| !!! | ATCCGGATATCTTATTTTGT+AGG | + | chr7.3:3950753-3950772 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTATAGGTTGTGG+AGG | - | chr7.3:3951847-3951866 | MS.gene072506:intron | 30.0% |
| AAAGATTGCATGGTAACTTG+GGG | - | chr7.3:3951496-3951515 | MS.gene072506:intron | 35.0% | |
| ACATCAAATTACATGGGAAC+TGG | - | chr7.3:3950122-3950141 | MS.gene072506:intron | 35.0% | |
| ATATTCTCTGCCCCAAATTA+TGG | - | chr7.3:3951908-3951927 | MS.gene072506:intron | 35.0% | |
| CGTCGAACATCAAATTACAT+GGG | - | chr7.3:3950116-3950135 | MS.gene072506:intron | 35.0% | |
| CTTCCAAATTCTTTATCAGC+AGG | + | chr7.3:3952007-3952026 | None:intergenic | 35.0% | |
| GAAAGATTGCATGGTAACTT+GGG | - | chr7.3:3951495-3951514 | MS.gene072506:intron | 35.0% | |
| GGAACAACAAAAAATAGGTG+TGG | + | chr7.3:3950563-3950582 | None:intergenic | 35.0% | |
| GGCCTACAAAATAAGATATC+CGG | - | chr7.3:3950748-3950767 | MS.gene072506:CDS | 35.0% | |
| GGTTTATCTTTGCATCTTCA+TGG | + | chr7.3:3950799-3950818 | None:intergenic | 35.0% | |
| GTAAAAGGAGGTTCAATGTT+AGG | - | chr7.3:3950843-3950862 | MS.gene072506:CDS | 35.0% | |
| TACCATGCAATCTTTCCTAA+CGG | + | chr7.3:3951491-3951510 | None:intergenic | 35.0% | |
| TCGTCGAACATCAAATTACA+TGG | - | chr7.3:3950115-3950134 | MS.gene072506:intron | 35.0% | |
| TGACATTGCTACCATAATCA+AGG | - | chr7.3:3950252-3950271 | MS.gene072506:intron | 35.0% | |
| TGAGACCTTAATCAGAAGTT+GGG | + | chr7.3:3951808-3951827 | None:intergenic | 35.0% | |
| ! | AGAAACAAGTAATTTGCAGC+TGG | + | chr7.3:3950674-3950693 | None:intergenic | 35.0% |
| ! | GATCTTGATCTTATTTGCAG+GGG | - | chr7.3:3951142-3951161 | MS.gene072506:intron | 35.0% |
| ! | GCTGCAAATTACTTGTTTCT+TGG | - | chr7.3:3950674-3950693 | MS.gene072506:CDS | 35.0% |
| ! | TTGGTGATTATGTAGACAGA+GGG | - | chr7.3:3950693-3950712 | MS.gene072506:CDS | 35.0% |
| !! | AAAAGTACTAACCGCAAATG+CGG | + | chr7.3:3949758-3949777 | None:intergenic | 35.0% |
| !!! | AAGCAAGTTTTTTTCCCGTT+AGG | - | chr7.3:3951473-3951492 | MS.gene072506:intron | 35.0% |
| !!! | TGATGTTGTCGCAGATTTTT+TGG | - | chr7.3:3951111-3951130 | MS.gene072506:CDS | 35.0% |
| AAATTCCCCGCCATAATTTG+GGG | + | chr7.3:3951921-3951940 | None:intergenic | 40.0% | |
| ACAATGTGAGTGATGCTAAG+AGG | + | chr7.3:3951563-3951582 | None:intergenic | 40.0% | |
| ACCATAATCAAGGTTGTGGA+CGG | - | chr7.3:3950262-3950281 | MS.gene072506:intron | 40.0% | |
| ACCATGCAATCTTTCCTAAC+GGG | + | chr7.3:3951490-3951509 | None:intergenic | 40.0% | |
| AGATTGTTAGAAGGAAAGGG+AGG | - | chr7.3:3949630-3949649 | MS.gene072506:intron | 40.0% | |
| AGTTTGTGGACTTCTGATAG+AGG | - | chr7.3:3951339-3951358 | MS.gene072506:intron | 40.0% | |
| ATCAGATAAGAGAGGTTACG+AGG | - | chr7.3:3950975-3950994 | MS.gene072506:CDS | 40.0% | |
| CAAATTACATGGGAACTGGA+GGG | - | chr7.3:3950126-3950145 | MS.gene072506:intron | 40.0% | |
| CAAATTCCCCGCCATAATTT+GGG | + | chr7.3:3951922-3951941 | None:intergenic | 40.0% | |
| CGATTGCTTTAACTGTTTGC+CGG | - | chr7.3:3950883-3950902 | MS.gene072506:CDS | 40.0% | |
| CGGCAAACAGTTAAAGCAAT+CGG | + | chr7.3:3950885-3950904 | None:intergenic | 40.0% | |
| GAATTGCATAGTGCAACTAC+AGG | + | chr7.3:3950387-3950406 | None:intergenic | 40.0% | |
| GAGACCTTAATCAGAAGTTG+GGG | + | chr7.3:3951807-3951826 | None:intergenic | 40.0% | |
| GATAGAGGCAACCTTTATCA+CGG | - | chr7.3:3951354-3951373 | MS.gene072506:intron | 40.0% | |
| GGAAAGATTGCATGGTAACT+TGG | - | chr7.3:3951494-3951513 | MS.gene072506:intron | 40.0% | |
| GGAAGGAGAAATGGACAAAA+CGG | - | chr7.3:3949587-3949606 | MS.gene072506:intron | 40.0% | |
| GTGAGACCTTAATCAGAAGT+TGG | + | chr7.3:3951809-3951828 | None:intergenic | 40.0% | |
| TAAGACCAAAGGAGATGTGT+CGG | - | chr7.3:3950150-3950169 | MS.gene072506:intron | 40.0% | |
| TCAAATTACATGGGAACTGG+AGG | - | chr7.3:3950125-3950144 | MS.gene072506:intron | 40.0% | |
| TCAAATTCCCCGCCATAATT+TGG | + | chr7.3:3951923-3951942 | None:intergenic | 40.0% | |
| TGCTACCATAATCAAGGTTG+TGG | - | chr7.3:3950258-3950277 | MS.gene072506:intron | 40.0% | |
| TTATGCTCGTATGAAGGAAG+AGG | + | chr7.3:3951180-3951199 | None:intergenic | 40.0% | |
| TTCGACGAAGAGATAAACCT+TGG | + | chr7.3:3950103-3950122 | None:intergenic | 40.0% | |
| TTCTTATAGGTTGTGGAGGA+TGG | - | chr7.3:3951851-3951870 | MS.gene072506:intron | 40.0% | |
| TTTGCCCCAACTTCTGATTA+AGG | - | chr7.3:3951800-3951819 | MS.gene072506:intron | 40.0% | |
| ! | AACAAGTAATTTGCAGCTGG+AGG | + | chr7.3:3950671-3950690 | None:intergenic | 40.0% |
| ! | ACAAGTAATTTGCAGCTGGA+GGG | + | chr7.3:3950670-3950689 | None:intergenic | 40.0% |
| ! | CAAAAGTACACGAAACACCT+CGG | + | chr7.3:3951087-3951106 | None:intergenic | 40.0% |
| ! | CTTGGTGATTATGTAGACAG+AGG | - | chr7.3:3950692-3950711 | MS.gene072506:CDS | 40.0% |
| ! | GGAGACTATATGCTTGCTTT+TGG | - | chr7.3:3950727-3950746 | MS.gene072506:CDS | 40.0% |
| ! | TCTCGAGTTGCAAGCAATAT+GGG | + | chr7.3:3951645-3951664 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTCCTGATGTCG+TGG | - | chr7.3:3950571-3950590 | MS.gene072506:intron | 40.0% |
| AACTGGAGGGATAAGACCAA+AGG | - | chr7.3:3950139-3950158 | MS.gene072506:intron | 45.0% | |
| ACCGTCCACAACCTTGATTA+TGG | + | chr7.3:3950266-3950285 | None:intergenic | 45.0% | |
| AGACAGAGGGAAGCAAAGTT+TGG | - | chr7.3:3950706-3950725 | MS.gene072506:CDS | 45.0% | |
| AGCAAAAGAACCACGACATC+AGG | + | chr7.3:3950584-3950603 | None:intergenic | 45.0% | |
| CTGCATGCAGGTGATATTCA+TGG | - | chr7.3:3950602-3950621 | MS.gene072506:CDS | 45.0% | |
| GCACGAAGATCGAGAAGAAT+AGG | + | chr7.3:3949729-3949748 | None:intergenic | 45.0% | |
| GCTCGTGTATAATTCGACTC+TGG | + | chr7.3:3951745-3951764 | None:intergenic | 45.0% | |
| GGAGGTTCAATGTTAGGCTA+TGG | - | chr7.3:3950849-3950868 | MS.gene072506:CDS | 45.0% | |
| GTGTATAATTCGACTCTGGC+TGG | + | chr7.3:3951741-3951760 | None:intergenic | 45.0% | |
| TACTAACCGCAAATGCGGAT+GGG | + | chr7.3:3949753-3949772 | None:intergenic | 45.0% | |
| TCATCAATGAGTGCAGCTAC+CGG | + | chr7.3:3950905-3950924 | None:intergenic | 45.0% | |
| TCCCGTTAGGAAAGATTGCA+TGG | - | chr7.3:3951486-3951505 | MS.gene072506:intron | 45.0% | |
| TTCTCTGCCCCAAATTATGG+CGG | - | chr7.3:3951911-3951930 | MS.gene072506:intron | 45.0% | |
| ! | CGAGAAGAATAGGTTGAGAG+AGG | + | chr7.3:3949719-3949738 | None:intergenic | 45.0% |
| ! | GTCTCGAGTTGCAAGCAATA+TGG | + | chr7.3:3951646-3951665 | None:intergenic | 45.0% |
| ! | TAACTTGGGGCTTCGATTTG+CGG | - | chr7.3:3951509-3951528 | MS.gene072506:intron | 45.0% |
| ! | TCTTATTTGCAGGGGTCATC+AGG | - | chr7.3:3951150-3951169 | MS.gene072506:intron | 45.0% |
| !! | CGAGGTGTTTCGTGTACTTT+TGG | - | chr7.3:3951085-3951104 | MS.gene072506:CDS | 45.0% |
| !! | TTAAATTAATGAAAATATTT+AGG | - | chr7.3:3951380-3951399 | MS.gene072506:intron | 5.0% |
| CCTACCGAAATTCCAGACAG+CGG | - | chr7.3:3950998-3951017 | MS.gene072506:CDS | 50.0% | |
| GATCCTGATCCTAACGCTGA+GGG | - | chr7.3:3951046-3951065 | MS.gene072506:CDS | 50.0% | |
| GTACTAACCGCAAATGCGGA+TGG | + | chr7.3:3949754-3949773 | None:intergenic | 50.0% | |
| GTCTCTTGTGCGATCTGCTT+TGG | - | chr7.3:3951020-3951039 | MS.gene072506:CDS | 50.0% | |
| TCTCTGCCCCAAATTATGGC+GGG | - | chr7.3:3951912-3951931 | MS.gene072506:intron | 50.0% | |
| TGATCCTAACGCTGAGGGTT+GGG | - | chr7.3:3951051-3951070 | MS.gene072506:CDS | 50.0% | |
| TGATCCTGATCCTAACGCTG+AGG | - | chr7.3:3951045-3951064 | MS.gene072506:CDS | 50.0% | |
| ! | GAGACCGCTGTCTGGAATTT+CGG | + | chr7.3:3951005-3951024 | None:intergenic | 50.0% |
| ! | GTGGTTCTTTTGCTGCATGC+AGG | - | chr7.3:3950590-3950609 | MS.gene072506:CDS | 50.0% |
| CAACCCTCAGCGTTAGGATC+AGG | + | chr7.3:3951052-3951071 | None:intergenic | 55.0% | |
| CTCTGCCCCAAATTATGGCG+GGG | - | chr7.3:3951913-3951932 | MS.gene072506:intron | 55.0% | |
| CTGATCCTAACGCTGAGGGT+TGG | - | chr7.3:3951050-3951069 | MS.gene072506:CDS | 55.0% | |
| GAGAGCCGACACATCTCCTT+TGG | + | chr7.3:3950158-3950177 | None:intergenic | 55.0% | |
| ! | CCGCTGTCTGGAATTTCGGT+AGG | + | chr7.3:3951001-3951020 | None:intergenic | 55.0% |
| CGTGCTCCCATCCGCATTTG+CGG | - | chr7.3:3949744-3949763 | MS.gene072506:CDS | 60.0% | |
| GGCGGGGAATTTGACAACGC+TGG | - | chr7.3:3951929-3951948 | MS.gene072506:intron | 60.0% | |
| GGTTGGGCAGATAGTGACCG+AGG | - | chr7.3:3951067-3951086 | MS.gene072506:CDS | 60.0% | |
| TCGCACAAGAGACCGCTGTC+TGG | + | chr7.3:3951013-3951032 | None:intergenic | 60.0% | |
| TCTGCCCAACCCTCAGCGTT+AGG | + | chr7.3:3951058-3951077 | None:intergenic | 60.0% | |
| TTTCTGCAGCCCCCTGCACA+GGG | - | chr7.3:3952142-3952161 | MS.gene072506:CDS | 60.0% | |
| ! | CTTGGGGCTTCGATTTGCGG+AGG | - | chr7.3:3951512-3951531 | MS.gene072506:intron | 60.0% |
| ! | TTTTCTGCAGCCCCCTGCAC+AGG | - | chr7.3:3952141-3952160 | MS.gene072506:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3949585 | 3952168 | 3949585 | ID=MS.gene072506 |
| chr7.3 | mRNA | 3949585 | 3952168 | 3949585 | ID=MS.gene072506.t1;Parent=MS.gene072506 |
| chr7.3 | exon | 3951988 | 3952168 | 3951988 | ID=MS.gene072506.t1.exon1;Parent=MS.gene072506.t1 |
| chr7.3 | CDS | 3951988 | 3952168 | 3951988 | ID=cds.MS.gene072506.t1;Parent=MS.gene072506.t1 |
| chr7.3 | exon | 3950582 | 3951141 | 3950582 | ID=MS.gene072506.t1.exon2;Parent=MS.gene072506.t1 |
| chr7.3 | CDS | 3950582 | 3951141 | 3950582 | ID=cds.MS.gene072506.t1;Parent=MS.gene072506.t1 |
| chr7.3 | exon | 3949699 | 3949893 | 3949699 | ID=MS.gene072506.t1.exon3;Parent=MS.gene072506.t1 |
| chr7.3 | CDS | 3949699 | 3949893 | 3949699 | ID=cds.MS.gene072506.t1;Parent=MS.gene072506.t1 |
| chr7.3 | exon | 3949585 | 3949602 | 3949585 | ID=MS.gene072506.t1.exon4;Parent=MS.gene072506.t1 |
| chr7.3 | CDS | 3949585 | 3949602 | 3949585 | ID=cds.MS.gene072506.t1;Parent=MS.gene072506.t1 |
| Gene Sequence |
| Protein sequence |
