Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050914.t1 | XP_003626230.2 | 98.1 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 2.40E-182 | 647.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050914.t1 | P48490 | 89.8 | 313 | 31 | 1 | 5 | 317 | 1 | 312 | 3.1e-170 | 599.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050914.t1 | G7KXK9 | 98.1 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 1.8e-182 | 647.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050914 | MS.gene072506 | 0.968766 | 3.80E-129 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050914 | MS.gene25326 | PPI |
| MS.gene032713 | MS.gene050914 | PPI |
| MS.gene050914 | MS.gene29552 | PPI |
| MS.gene039628 | MS.gene050914 | PPI |
| MS.gene23035 | MS.gene050914 | PPI |
| MS.gene58553 | MS.gene050914 | PPI |
| MS.gene050914 | MS.gene93729 | PPI |
| MS.gene050914 | MS.gene49664 | PPI |
| MS.gene61079 | MS.gene050914 | PPI |
| MS.gene050914 | MS.gene007026 | PPI |
| MS.gene06018 | MS.gene050914 | PPI |
| MS.gene058508 | MS.gene050914 | PPI |
| MS.gene23125 | MS.gene050914 | PPI |
| MS.gene55750 | MS.gene050914 | PPI |
| MS.gene050914 | MS.gene072506 | PPI |
| MS.gene89706 | MS.gene050914 | PPI |
| MS.gene63929 | MS.gene050914 | PPI |
| MS.gene000895 | MS.gene050914 | PPI |
| MS.gene050914 | MS.gene63084 | PPI |
| MS.gene046213 | MS.gene050914 | PPI |
| MS.gene050914 | MS.gene32487 | PPI |
| MS.gene55751 | MS.gene050914 | PPI |
| MS.gene048874 | MS.gene050914 | PPI |
| MS.gene88462 | MS.gene050914 | PPI |
| MS.gene99972 | MS.gene050914 | PPI |
| MS.gene050914 | MS.gene50106 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050914.t1 | MTR_7g112870 | 98.107 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 0.0 | 639 |
| MS.gene050914.t1 | MTR_1g079950 | 76.603 | 312 | 67 | 2 | 1 | 306 | 26 | 337 | 0.0 | 506 |
| MS.gene050914.t1 | MTR_1g079950 | 76.948 | 308 | 65 | 2 | 5 | 306 | 1 | 308 | 3.42e-180 | 501 |
| MS.gene050914.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 4.65e-180 | 500 |
| MS.gene050914.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 8.76e-180 | 499 |
| MS.gene050914.t1 | MTR_7g116380 | 74.921 | 315 | 73 | 2 | 5 | 313 | 1 | 315 | 1.40e-177 | 494 |
| MS.gene050914.t1 | MTR_7g116380 | 76.299 | 308 | 67 | 2 | 5 | 306 | 1 | 308 | 1.63e-177 | 494 |
| MS.gene050914.t1 | MTR_8g098980 | 72.500 | 320 | 79 | 3 | 5 | 317 | 1 | 318 | 4.55e-177 | 493 |
| MS.gene050914.t1 | MTR_5g081230 | 76.923 | 299 | 66 | 1 | 5 | 300 | 17 | 315 | 5.78e-172 | 479 |
| MS.gene050914.t1 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 4.08e-171 | 478 |
| MS.gene050914.t1 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 7.99e-171 | 476 |
| MS.gene050914.t1 | MTR_1g043240 | 71.565 | 313 | 83 | 3 | 5 | 312 | 1 | 312 | 7.24e-169 | 472 |
| MS.gene050914.t1 | MTR_8g005010 | 74.048 | 289 | 73 | 1 | 10 | 296 | 4 | 292 | 6.85e-165 | 461 |
| MS.gene050914.t1 | MTR_1g079950 | 79.116 | 249 | 48 | 1 | 62 | 306 | 34 | 282 | 8.58e-151 | 426 |
| MS.gene050914.t1 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 1.97e-145 | 410 |
| MS.gene050914.t1 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 3.32e-145 | 409 |
| MS.gene050914.t1 | MTR_8g062430 | 46.154 | 299 | 154 | 3 | 10 | 307 | 7 | 299 | 2.27e-95 | 285 |
| MS.gene050914.t1 | MTR_7g107310 | 46.392 | 291 | 149 | 3 | 10 | 299 | 14 | 298 | 1.73e-94 | 283 |
| MS.gene050914.t1 | MTR_5g037200 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 3.48e-94 | 281 |
| MS.gene050914.t1 | MTR_8g085610 | 46.392 | 291 | 149 | 3 | 10 | 299 | 9 | 293 | 3.86e-93 | 279 |
| MS.gene050914.t1 | MTR_5g093990 | 48.175 | 274 | 141 | 1 | 28 | 300 | 17 | 290 | 6.95e-93 | 278 |
| MS.gene050914.t1 | MTR_8g085610 | 46.840 | 269 | 141 | 2 | 32 | 299 | 2 | 269 | 7.14e-90 | 270 |
| MS.gene050914.t1 | MTR_1g039380 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 7.37e-88 | 265 |
| MS.gene050914.t1 | MTR_1g039380 | 46.400 | 250 | 131 | 3 | 40 | 287 | 4 | 252 | 6.96e-85 | 257 |
| MS.gene050914.t1 | MTR_2g087530 | 47.078 | 308 | 144 | 6 | 8 | 296 | 639 | 946 | 6.31e-80 | 261 |
| MS.gene050914.t1 | MTR_1g089370 | 43.068 | 339 | 164 | 8 | 5 | 315 | 524 | 861 | 8.84e-80 | 259 |
| MS.gene050914.t1 | MTR_4g050540 | 46.926 | 309 | 145 | 6 | 7 | 296 | 643 | 951 | 3.92e-79 | 259 |
| MS.gene050914.t1 | MTR_2g087530 | 45.625 | 320 | 155 | 6 | 7 | 307 | 525 | 844 | 2.01e-78 | 256 |
| MS.gene050914.t1 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 169 | 446 | 2.51e-71 | 229 |
| MS.gene050914.t1 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 236 | 513 | 1.36e-70 | 228 |
| MS.gene050914.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 87 | 365 | 2.38e-68 | 219 |
| MS.gene050914.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 186 | 464 | 2.15e-67 | 219 |
| MS.gene050914.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 196 | 474 | 3.17e-67 | 219 |
| MS.gene050914.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 157 | 435 | 3.33e-67 | 218 |
| MS.gene050914.t1 | MTR_2g100130 | 38.889 | 306 | 167 | 7 | 8 | 295 | 196 | 499 | 3.60e-67 | 219 |
| MS.gene050914.t1 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 157 | 459 | 7.35e-66 | 214 |
| MS.gene050914.t1 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 196 | 498 | 7.65e-66 | 215 |
| MS.gene050914.t1 | MTR_2g100130 | 41.111 | 270 | 150 | 6 | 8 | 270 | 196 | 463 | 9.35e-66 | 214 |
| MS.gene050914.t1 | MTR_2g100160 | 37.829 | 304 | 176 | 7 | 6 | 298 | 104 | 405 | 5.50e-61 | 200 |
| MS.gene050914.t1 | MTR_5g037200 | 49.730 | 185 | 87 | 2 | 10 | 193 | 7 | 186 | 9.29e-60 | 191 |
| MS.gene050914.t1 | MTR_8g072600 | 30.938 | 320 | 155 | 11 | 42 | 299 | 119 | 434 | 1.70e-34 | 131 |
| MS.gene050914.t1 | MTR_8g072600 | 32.900 | 231 | 115 | 7 | 42 | 236 | 119 | 345 | 2.48e-28 | 112 |
| MS.gene050914.t1 | MTR_2g099710 | 30.417 | 240 | 126 | 9 | 61 | 270 | 244 | 472 | 1.33e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050914.t1 | AT5G27840 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MS.gene050914.t1 | AT3G05580 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MS.gene050914.t1 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MS.gene050914.t1 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MS.gene050914.t1 | AT5G27840 | 87.419 | 310 | 39 | 0 | 1 | 310 | 5 | 314 | 0.0 | 566 |
| MS.gene050914.t1 | AT3G46820 | 75.166 | 302 | 71 | 1 | 2 | 299 | 6 | 307 | 6.74e-174 | 484 |
| MS.gene050914.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 8.03e-174 | 484 |
| MS.gene050914.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 8.03e-174 | 484 |
| MS.gene050914.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 8.03e-174 | 484 |
| MS.gene050914.t1 | AT2G39840 | 76.254 | 299 | 68 | 1 | 5 | 300 | 14 | 312 | 1.61e-173 | 483 |
| MS.gene050914.t1 | AT2G29400 | 75.083 | 301 | 69 | 2 | 5 | 300 | 15 | 314 | 9.96e-173 | 481 |
| MS.gene050914.t1 | AT1G64040 | 72.013 | 318 | 84 | 2 | 5 | 317 | 1 | 318 | 1.01e-172 | 481 |
| MS.gene050914.t1 | AT4G11240 | 69.811 | 318 | 91 | 2 | 5 | 317 | 1 | 318 | 1.81e-169 | 473 |
| MS.gene050914.t1 | AT3G05580 | 89.516 | 248 | 26 | 0 | 1 | 248 | 5 | 252 | 2.37e-168 | 468 |
| MS.gene050914.t1 | AT5G43380 | 70.533 | 319 | 87 | 3 | 5 | 316 | 1 | 319 | 5.87e-166 | 465 |
| MS.gene050914.t1 | AT5G43380 | 70.533 | 319 | 87 | 3 | 5 | 316 | 1 | 319 | 8.42e-166 | 464 |
| MS.gene050914.t1 | AT5G43380 | 70.533 | 319 | 87 | 3 | 5 | 316 | 1 | 319 | 2.04e-165 | 463 |
| MS.gene050914.t1 | AT2G42500 | 47.635 | 296 | 147 | 4 | 6 | 299 | 9 | 298 | 9.26e-97 | 288 |
| MS.gene050914.t1 | AT5G55260 | 47.405 | 289 | 146 | 2 | 28 | 315 | 17 | 300 | 7.92e-96 | 286 |
| MS.gene050914.t1 | AT3G58500 | 47.079 | 291 | 147 | 3 | 10 | 299 | 14 | 298 | 2.15e-95 | 285 |
| MS.gene050914.t1 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 2.41e-94 | 282 |
| MS.gene050914.t1 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 2.41e-94 | 282 |
| MS.gene050914.t1 | AT1G69960 | 45.485 | 299 | 156 | 3 | 10 | 307 | 8 | 300 | 3.46e-94 | 282 |
| MS.gene050914.t1 | AT4G26720 | 44.828 | 290 | 150 | 2 | 28 | 316 | 17 | 297 | 3.91e-93 | 279 |
| MS.gene050914.t1 | AT1G59830 | 45.485 | 299 | 156 | 3 | 10 | 307 | 7 | 299 | 1.63e-92 | 277 |
| MS.gene050914.t1 | AT5G55260 | 41.515 | 330 | 146 | 3 | 28 | 315 | 17 | 341 | 1.93e-87 | 266 |
| MS.gene050914.t1 | AT3G19980 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 2.47e-87 | 264 |
| MS.gene050914.t1 | AT1G50370 | 44.286 | 280 | 148 | 4 | 10 | 287 | 3 | 276 | 2.50e-87 | 264 |
| MS.gene050914.t1 | AT1G59830 | 48.988 | 247 | 119 | 3 | 10 | 255 | 7 | 247 | 1.15e-81 | 248 |
| MS.gene050914.t1 | AT4G03080 | 45.779 | 308 | 150 | 7 | 5 | 296 | 526 | 832 | 1.63e-79 | 259 |
| MS.gene050914.t1 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 644 | 982 | 1.07e-77 | 256 |
| MS.gene050914.t1 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 649 | 987 | 1.08e-77 | 256 |
| MS.gene050914.t1 | AT1G03445 | 40.356 | 337 | 174 | 9 | 4 | 315 | 451 | 785 | 1.07e-76 | 250 |
| MS.gene050914.t1 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 660 | 979 | 1.18e-76 | 253 |
| MS.gene050914.t1 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 655 | 974 | 1.22e-76 | 253 |
| MS.gene050914.t1 | AT2G42500 | 50.455 | 220 | 107 | 2 | 81 | 299 | 33 | 251 | 2.93e-76 | 234 |
| MS.gene050914.t1 | AT1G03445 | 41.956 | 317 | 166 | 8 | 4 | 304 | 451 | 765 | 3.87e-76 | 248 |
| MS.gene050914.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.04e-69 | 224 |
| MS.gene050914.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.04e-69 | 224 |
| MS.gene050914.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.04e-69 | 224 |
| MS.gene050914.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 220 | 501 | 6.94e-69 | 224 |
| MS.gene050914.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 221 | 502 | 7.18e-69 | 224 |
| MS.gene050914.t1 | AT2G42500 | 45.882 | 170 | 82 | 4 | 6 | 170 | 9 | 173 | 3.74e-46 | 154 |
| MS.gene050914.t1 | AT2G42500 | 45.763 | 177 | 84 | 5 | 6 | 177 | 9 | 178 | 5.12e-46 | 154 |
| MS.gene050914.t1 | AT2G42500 | 47.531 | 162 | 75 | 4 | 6 | 162 | 9 | 165 | 3.16e-45 | 152 |
| MS.gene050914.t1 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.34e-37 | 138 |
| MS.gene050914.t1 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.34e-37 | 138 |
| MS.gene050914.t1 | AT5G63870 | 34.513 | 226 | 113 | 5 | 51 | 241 | 73 | 298 | 3.10e-31 | 119 |
| MS.gene050914.t1 | AT1G48120 | 30.537 | 298 | 143 | 8 | 35 | 270 | 630 | 925 | 1.21e-26 | 110 |
| MS.gene050914.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 5.92e-21 | 94.0 |
| MS.gene050914.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 7.29e-21 | 93.6 |
| MS.gene050914.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 8.04e-21 | 93.2 |
Find 70 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTCCCCGCCATAATT+TGG | 0.189229 | 7.1:+3417523 | None:intergenic |
| AAACCTGCTGATAAAGAATT+TGG | 0.231736 | 7.1:-3417442 | MS.gene050914:CDS |
| CGAGGTGTTTCGTGTACTTT+TGG | 0.244051 | 7.1:-3418358 | MS.gene050914:CDS |
| GCTGCAAATTACTTGTTTCT+TGG | 0.257569 | 7.1:-3418769 | MS.gene050914:CDS |
| ATATTCTCTGCCCCAAATTA+TGG | 0.268724 | 7.1:-3417535 | MS.gene050914:CDS |
| CAAATTCCCCGCCATAATTT+GGG | 0.269829 | 7.1:+3417524 | None:intergenic |
| GGTTTATCTTTGCATCTTCA+TGG | 0.299589 | 7.1:+3418647 | None:intergenic |
| GGAGACTATATGCTTGCTTT+TGG | 0.332948 | 7.1:-3418716 | MS.gene050914:CDS |
| ATGATCTTGATCTTATTTGC+AGG | 0.336140 | 7.1:-3418303 | MS.gene050914:CDS |
| GTCTCTTGTGCGATCTGCTT+TGG | 0.337128 | 7.1:-3418423 | MS.gene050914:CDS |
| GAGACCGCTGTCTGGAATTT+CGG | 0.338263 | 7.1:+3418441 | None:intergenic |
| GCAAAGATAAACCGAATATA+TGG | 0.352537 | 7.1:-3418637 | MS.gene050914:CDS |
| GATAGAGTTTATCTCTTAAG+AGG | 0.369598 | 7.1:-3418673 | MS.gene050914:CDS |
| AGACAGAGGGAAGCAAAGTT+TGG | 0.370499 | 7.1:-3418737 | MS.gene050914:CDS |
| CGATTGCTTTAACTGTTTGC+CGG | 0.396470 | 7.1:-3418560 | MS.gene050914:CDS |
| AAGAAGATTGTTAGAAGGAA+AGG | 0.405161 | 7.1:-3419820 | MS.gene050914:CDS |
| TGATCCTAACGCTGAGGGTT+GGG | 0.411650 | 7.1:-3418392 | MS.gene050914:CDS |
| TCTTATTTGCAGGGGTCATC+AGG | 0.413370 | 7.1:-3418293 | MS.gene050914:intron |
| GTAAAAGGAGGTTCAATGTT+AGG | 0.413611 | 7.1:-3418600 | MS.gene050914:CDS |
| TTCTTATAGGTTGTGGAGGA+TGG | 0.418589 | 7.1:-3417592 | MS.gene050914:intron |
| GGCCTACAAAATAAGATATC+CGG | 0.419399 | 7.1:-3418695 | MS.gene050914:CDS |
| AACGACAATGGAAGGAGAAA+TGG | 0.424864 | 7.1:-3419868 | None:intergenic |
| GTGATAAGAAGATTGTTAGA+AGG | 0.438726 | 7.1:-3419825 | MS.gene050914:CDS |
| CTTCCAAATTCTTTATCAGC+AGG | 0.440807 | 7.1:+3417439 | None:intergenic |
| CGTGCTCCCATCCGCATTTG+CGG | 0.444802 | 7.1:-3419702 | MS.gene050914:intron |
| CTTAAGAGATAAACTCTATC+CGG | 0.451063 | 7.1:+3418676 | None:intergenic |
| GACTAGATCTATCCCTGTGC+AGG | 0.453447 | 7.1:+3417289 | None:intergenic |
| CAACCCTCAGCGTTAGGATC+AGG | 0.455754 | 7.1:+3418394 | None:intergenic |
| CTGCATGCAGGTGATATTCA+TGG | 0.458163 | 7.1:-3418841 | MS.gene050914:intron |
| TCGCACAAGAGACCGCTGTC+TGG | 0.467988 | 7.1:+3418433 | None:intergenic |
| TCTGCCCAACCCTCAGCGTT+AGG | 0.475726 | 7.1:+3418388 | None:intergenic |
| GCACGAAGATCGAGAAGAAT+AGG | 0.484459 | 7.1:+3419720 | None:intergenic |
| CGAGAAGAATAGGTTGAGAG+AGG | 0.490202 | 7.1:+3419730 | None:intergenic |
| AGAAGATTGTTAGAAGGAAA+GGG | 0.491790 | 7.1:-3419819 | MS.gene050914:CDS |
| GGAGGTTCAATGTTAGGCTA+TGG | 0.496598 | 7.1:-3418594 | MS.gene050914:CDS |
| CGGCAAACAGTTAAAGCAAT+CGG | 0.514394 | 7.1:+3418561 | None:intergenic |
| TGATCTTGATCTTATTTGCA+GGG | 0.521526 | 7.1:-3418302 | MS.gene050914:CDS |
| GGAAGGAGAAATGGACAAAA+CGG | 0.528497 | 7.1:-3419859 | MS.gene050914:CDS |
| CTGATCCTAACGCTGAGGGT+TGG | 0.537776 | 7.1:-3418393 | MS.gene050914:CDS |
| TACTAACCGCAAATGCGGAT+GGG | 0.543656 | 7.1:+3419696 | None:intergenic |
| AGAAACAAGTAATTTGCAGC+TGG | 0.546090 | 7.1:+3418772 | None:intergenic |
| GGCATAGGAACGACAATGGA+AGG | 0.548710 | 7.1:-3419876 | None:intergenic |
| TAGATCTATCCCTGTGCAGG+GGG | 0.550107 | 7.1:+3417292 | None:intergenic |
| TCTCTGCCCCAAATTATGGC+GGG | 0.558401 | 7.1:-3417531 | MS.gene050914:CDS |
| AACAAGTAATTTGCAGCTGG+AGG | 0.567978 | 7.1:+3418775 | None:intergenic |
| CCGCTGTCTGGAATTTCGGT+AGG | 0.569213 | 7.1:+3418445 | None:intergenic |
| TCATCAATGAGTGCAGCTAC+CGG | 0.570663 | 7.1:+3418541 | None:intergenic |
| GAGAAAATACTTTGTATGCA+TGG | 0.574695 | 7.1:-3418520 | MS.gene050914:CDS |
| TTGGTGATTATGTAGACAGA+GGG | 0.580074 | 7.1:-3418750 | MS.gene050914:CDS |
| ACTAGATCTATCCCTGTGCA+GGG | 0.580786 | 7.1:+3417290 | None:intergenic |
| CTCTGCCCCAAATTATGGCG+GGG | 0.582113 | 7.1:-3417530 | MS.gene050914:CDS |
| GATCCTGATCCTAACGCTGA+GGG | 0.583668 | 7.1:-3418397 | MS.gene050914:CDS |
| GTACTAACCGCAAATGCGGA+TGG | 0.584337 | 7.1:+3419695 | None:intergenic |
| GGCGGGGAATTTGACAACGC+TGG | 0.591736 | 7.1:-3417514 | MS.gene050914:CDS |
| AGATTGTTAGAAGGAAAGGG+AGG | 0.602378 | 7.1:-3419816 | MS.gene050914:CDS |
| TTCTCTGCCCCAAATTATGG+CGG | 0.611120 | 7.1:-3417532 | MS.gene050914:CDS |
| TTTACGATGAATGTAAAAGG+AGG | 0.613144 | 7.1:-3418612 | MS.gene050914:CDS |
| ACAAGTAATTTGCAGCTGGA+GGG | 0.614880 | 7.1:+3418776 | None:intergenic |
| CTTGGTGATTATGTAGACAG+AGG | 0.622438 | 7.1:-3418751 | MS.gene050914:CDS |
| ATCAGATAAGAGAGGTTACG+AGG | 0.624724 | 7.1:-3418468 | MS.gene050914:CDS |
| AAAAGTACTAACCGCAAATG+CGG | 0.624956 | 7.1:+3419691 | None:intergenic |
| TGATCCTGATCCTAACGCTG+AGG | 0.628710 | 7.1:-3418398 | MS.gene050914:CDS |
| AAATTCCCCGCCATAATTTG+GGG | 0.631186 | 7.1:+3417525 | None:intergenic |
| GATCTTGATCTTATTTGCAG+GGG | 0.650810 | 7.1:-3418301 | MS.gene050914:CDS |
| CTAGATCTATCCCTGTGCAG+GGG | 0.653548 | 7.1:+3417291 | None:intergenic |
| CAAAAGTACACGAAACACCT+CGG | 0.655383 | 7.1:+3418359 | None:intergenic |
| AAATTTAGATCAGATAAGAG+AGG | 0.664730 | 7.1:-3418476 | MS.gene050914:CDS |
| GGTTGGGCAGATAGTGACCG+AGG | 0.706364 | 7.1:-3418376 | MS.gene050914:CDS |
| AAAATACTTTGTATGCATGG+AGG | 0.710478 | 7.1:-3418517 | MS.gene050914:CDS |
| CCTACCGAAATTCCAGACAG+CGG | 0.761713 | 7.1:-3418445 | MS.gene050914:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATTTACTAAAAGT+TGG | - | chr7.1:3418039-3418058 | MS.gene050914:intron | 10.0% |
| !! | TCAAAAAAAAAAAAAAAAGT+TGG | - | chr7.1:3418074-3418093 | MS.gene050914:intron | 10.0% |
| !!! | CTATTTTTCAAAAATATATA+CGG | - | chr7.1:3417592-3417611 | MS.gene050914:intron | 10.0% |
| !! | ATATCAACTAATTTCAAAAT+GGG | + | chr7.1:3419032-3419051 | None:intergenic | 15.0% |
| !! | ATTATTCAGTTTCTATTAAA+TGG | + | chr7.1:3418221-3418240 | None:intergenic | 15.0% |
| !! | TATATCAACTAATTTCAAAA+TGG | + | chr7.1:3419033-3419052 | None:intergenic | 15.0% |
| !!! | GTTTTTACAATTAAGAATAT+TGG | - | chr7.1:3417708-3417727 | MS.gene050914:intron | 15.0% |
| !!! | TGCAATTTTTTTTTTCTTAT+AGG | - | chr7.1:3419553-3419572 | MS.gene050914:intron | 15.0% |
| !! | AAAATATTTAGGAATGAAAC+TGG | - | chr7.1:3419106-3419125 | MS.gene050914:intron | 20.0% |
| !! | AGATAAGAAAGTCAATATAT+TGG | + | chr7.1:3419412-3419431 | None:intergenic | 20.0% |
| !! | TAAAACCTATATCAAACATA+TGG | - | chr7.1:3418005-3418024 | MS.gene050914:intron | 20.0% |
| !! | TTAAGAATATTGGTCATTTA+AGG | - | chr7.1:3417718-3417737 | MS.gene050914:intron | 20.0% |
| !! | TTTAATTCATGATAGATGAA+GGG | + | chr7.1:3418127-3418146 | None:intergenic | 20.0% |
| !!! | AAAAGTAACTAGATGAATTT+TGG | + | chr7.1:3418952-3418971 | None:intergenic | 20.0% |
| !!! | ATCACAAATGAATTTTAAGA+AGG | - | chr7.1:3419748-3419767 | MS.gene050914:CDS | 20.0% |
| !!! | ATGAATTTTGGAAATTATGA+AGG | + | chr7.1:3418940-3418959 | None:intergenic | 20.0% |
| !!! | CATAGTCTTGTATATATATT+TGG | - | chr7.1:3419802-3419821 | MS.gene050914:CDS | 20.0% |
| !!! | TGATCTAAATTTTGTAATTC+AGG | + | chr7.1:3418674-3418693 | None:intergenic | 20.0% |
| !!! | TTATTGAGACTTTTTGAATA+TGG | - | chr7.1:3418353-3418372 | MS.gene050914:CDS | 20.0% |
| !!! | TTTTAAAATATTGCAGATAG+AGG | + | chr7.1:3418173-3418192 | None:intergenic | 20.0% |
| !!! | TTTTAATTCATGATAGATGA+AGG | + | chr7.1:3418128-3418147 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTATAGGTTG+TGG | - | chr7.1:3419559-3419578 | MS.gene050914:intron | 20.0% |
| !!! | TTTTTTTTTTTGAGCAATAC+AGG | + | chr7.1:3418067-3418086 | None:intergenic | 20.0% |
| ! | AAAATATATCACGAAAACCA+AGG | - | chr7.1:3417798-3417817 | MS.gene050914:intron | 25.0% |
| ! | AAATTTAGATCAGATAAGAG+AGG | - | chr7.1:3418682-3418701 | MS.gene050914:CDS | 25.0% |
| ! | CATCGTAAAAACCATATATT+CGG | + | chr7.1:3418535-3418554 | None:intergenic | 25.0% |
| ! | TAATTTAATGACCGTGATAA+AGG | + | chr7.1:3419083-3419102 | None:intergenic | 25.0% |
| ! | TCAAAAATATATACGGAGTT+TGG | - | chr7.1:3417599-3417618 | MS.gene050914:intron | 25.0% |
| ! | TTGAGAATTGTGGTTAAATA+TGG | - | chr7.1:3417914-3417933 | MS.gene050914:intron | 25.0% |
| !! | ATTAGTTGATATACAGTTTG+TGG | - | chr7.1:3419040-3419059 | MS.gene050914:intron | 25.0% |
| !! | GTAAATTTTGTTGAGAATTG+TGG | - | chr7.1:3417904-3417923 | MS.gene050914:intron | 25.0% |
| !! | GTTTTTACGATGAATGTAAA+AGG | - | chr7.1:3418543-3418562 | MS.gene050914:CDS | 25.0% |
| !!! | TTTCTCTCTCTTTGAAATTT+TGG | - | chr7.1:3417502-3417521 | MS.gene050914:CDS | 25.0% |
| AAAATACTTTGTATGCATGG+AGG | - | chr7.1:3418641-3418660 | MS.gene050914:CDS | 30.0% | |
| AAACCTGCTGATAAAGAATT+TGG | - | chr7.1:3419716-3419735 | MS.gene050914:CDS | 30.0% | |
| AAGAAGATTGTTAGAAGGAA+AGG | - | chr7.1:3417338-3417357 | MS.gene050914:intron | 30.0% | |
| AGAAGATTGTTAGAAGGAAA+GGG | - | chr7.1:3417339-3417358 | MS.gene050914:intron | 30.0% | |
| ATGAAACTGGAACAATTAAG+TGG | - | chr7.1:3419119-3419138 | MS.gene050914:intron | 30.0% | |
| CAAAAAGTCTCAATAAGTCT+TGG | + | chr7.1:3418349-3418368 | None:intergenic | 30.0% | |
| CATCAGGAACAACAAAAAAT+AGG | + | chr7.1:3418283-3418302 | None:intergenic | 30.0% | |
| CTTAAGAGATAAACTCTATC+CGG | + | chr7.1:3418485-3418504 | None:intergenic | 30.0% | |
| GAATATTGGTCATTTAAGGA+AGG | - | chr7.1:3417722-3417741 | MS.gene050914:intron | 30.0% | |
| GAGAAAATACTTTGTATGCA+TGG | - | chr7.1:3418638-3418657 | MS.gene050914:CDS | 30.0% | |
| GATAGAGTTTATCTCTTAAG+AGG | - | chr7.1:3418485-3418504 | MS.gene050914:CDS | 30.0% | |
| GCAAAGATAAACCGAATATA+TGG | - | chr7.1:3418521-3418540 | MS.gene050914:CDS | 30.0% | |
| GTGATAAGAAGATTGTTAGA+AGG | - | chr7.1:3417333-3417352 | MS.gene050914:intron | 30.0% | |
| TCAAAGAGAGAGAAAACAAA+AGG | + | chr7.1:3417497-3417516 | None:intergenic | 30.0% | |
| TCTTGCCATATGTTTGATAT+AGG | + | chr7.1:3418013-3418032 | None:intergenic | 30.0% | |
| TGAAACTGGAACAATTAAGT+GGG | - | chr7.1:3419120-3419139 | MS.gene050914:intron | 30.0% | |
| TTATCATTATGCTCGTATGA+AGG | + | chr7.1:3418901-3418920 | None:intergenic | 30.0% | |
| TTTACGATGAATGTAAAAGG+AGG | - | chr7.1:3418546-3418565 | MS.gene050914:CDS | 30.0% | |
| ! | ATGATCTTGATCTTATTTGC+AGG | - | chr7.1:3418855-3418874 | MS.gene050914:intron | 30.0% |
| ! | TGATCTTGATCTTATTTGCA+GGG | - | chr7.1:3418856-3418875 | MS.gene050914:intron | 30.0% |
| ! | TTGAGACTTTTTGAATATGG+TGG | - | chr7.1:3418356-3418375 | MS.gene050914:CDS | 30.0% |
| !!! | ATCCGGATATCTTATTTTGT+AGG | + | chr7.1:3418468-3418487 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTATAGGTTGTGG+AGG | - | chr7.1:3419562-3419581 | MS.gene050914:intron | 30.0% |
| AAAGATTGCATGGTAACTTG+GGG | - | chr7.1:3419211-3419230 | MS.gene050914:intron | 35.0% | |
| ACATCAAATTACATGGGAAC+TGG | - | chr7.1:3417837-3417856 | MS.gene050914:intron | 35.0% | |
| ATATTCTCTGCCCCAAATTA+TGG | - | chr7.1:3419623-3419642 | MS.gene050914:intron | 35.0% | |
| CGTCGAACATCAAATTACAT+GGG | - | chr7.1:3417831-3417850 | MS.gene050914:intron | 35.0% | |
| CTTCCAAATTCTTTATCAGC+AGG | + | chr7.1:3419722-3419741 | None:intergenic | 35.0% | |
| GAAAGATTGCATGGTAACTT+GGG | - | chr7.1:3419210-3419229 | MS.gene050914:intron | 35.0% | |
| GGAACAACAAAAAATAGGTG+TGG | + | chr7.1:3418278-3418297 | None:intergenic | 35.0% | |
| GGCCTACAAAATAAGATATC+CGG | - | chr7.1:3418463-3418482 | MS.gene050914:CDS | 35.0% | |
| GGTTTATCTTTGCATCTTCA+TGG | + | chr7.1:3418514-3418533 | None:intergenic | 35.0% | |
| GTAAAAGGAGGTTCAATGTT+AGG | - | chr7.1:3418558-3418577 | MS.gene050914:CDS | 35.0% | |
| TACCATGCAATCTTTCCTAA+CGG | + | chr7.1:3419206-3419225 | None:intergenic | 35.0% | |
| TCGTCGAACATCAAATTACA+TGG | - | chr7.1:3417830-3417849 | MS.gene050914:intron | 35.0% | |
| TGACATTGCTACCATAATCA+AGG | - | chr7.1:3417967-3417986 | MS.gene050914:intron | 35.0% | |
| TGAGACCTTAATCAGAAGTT+GGG | + | chr7.1:3419523-3419542 | None:intergenic | 35.0% | |
| ! | AGAAACAAGTAATTTGCAGC+TGG | + | chr7.1:3418389-3418408 | None:intergenic | 35.0% |
| ! | GATCTTGATCTTATTTGCAG+GGG | - | chr7.1:3418857-3418876 | MS.gene050914:intron | 35.0% |
| ! | GCTGCAAATTACTTGTTTCT+TGG | - | chr7.1:3418389-3418408 | MS.gene050914:CDS | 35.0% |
| ! | TTGGTGATTATGTAGACAGA+GGG | - | chr7.1:3418408-3418427 | MS.gene050914:CDS | 35.0% |
| !! | AAAAGTACTAACCGCAAATG+CGG | + | chr7.1:3417470-3417489 | None:intergenic | 35.0% |
| !!! | AAGCAAGTTTTTTTCCCGTT+AGG | - | chr7.1:3419188-3419207 | MS.gene050914:intron | 35.0% |
| !!! | TGATGTTGTCGCAGATTTTT+TGG | - | chr7.1:3418826-3418845 | MS.gene050914:CDS | 35.0% |
| AAATTCCCCGCCATAATTTG+GGG | + | chr7.1:3419636-3419655 | None:intergenic | 40.0% | |
| ACAATGTGAGTGATGCTAAG+AGG | + | chr7.1:3419278-3419297 | None:intergenic | 40.0% | |
| ACCATAATCAAGGTTGTGGA+CGG | - | chr7.1:3417977-3417996 | MS.gene050914:intron | 40.0% | |
| ACCATGCAATCTTTCCTAAC+GGG | + | chr7.1:3419205-3419224 | None:intergenic | 40.0% | |
| AGATTGTTAGAAGGAAAGGG+AGG | - | chr7.1:3417342-3417361 | MS.gene050914:intron | 40.0% | |
| AGTTTGTGGACTTCTGATAG+AGG | - | chr7.1:3419054-3419073 | MS.gene050914:intron | 40.0% | |
| ATCAGATAAGAGAGGTTACG+AGG | - | chr7.1:3418690-3418709 | MS.gene050914:CDS | 40.0% | |
| CAAATTACATGGGAACTGGA+GGG | - | chr7.1:3417841-3417860 | MS.gene050914:intron | 40.0% | |
| CAAATTCCCCGCCATAATTT+GGG | + | chr7.1:3419637-3419656 | None:intergenic | 40.0% | |
| CGATTGCTTTAACTGTTTGC+CGG | - | chr7.1:3418598-3418617 | MS.gene050914:CDS | 40.0% | |
| CGGCAAACAGTTAAAGCAAT+CGG | + | chr7.1:3418600-3418619 | None:intergenic | 40.0% | |
| GAATTGCATAGTGCAACTAC+AGG | + | chr7.1:3418102-3418121 | None:intergenic | 40.0% | |
| GAGACCTTAATCAGAAGTTG+GGG | + | chr7.1:3419522-3419541 | None:intergenic | 40.0% | |
| GATAGAGGCAACCTTTATCA+CGG | - | chr7.1:3419069-3419088 | MS.gene050914:intron | 40.0% | |
| GGAAAGATTGCATGGTAACT+TGG | - | chr7.1:3419209-3419228 | MS.gene050914:intron | 40.0% | |
| GGAAGGAGAAATGGACAAAA+CGG | - | chr7.1:3417299-3417318 | MS.gene050914:intron | 40.0% | |
| GTGAGACCTTAATCAGAAGT+TGG | + | chr7.1:3419524-3419543 | None:intergenic | 40.0% | |
| TAAGACCAAAGGAGATGTGT+CGG | - | chr7.1:3417865-3417884 | MS.gene050914:intron | 40.0% | |
| TCAAATTACATGGGAACTGG+AGG | - | chr7.1:3417840-3417859 | MS.gene050914:intron | 40.0% | |
| TCAAATTCCCCGCCATAATT+TGG | + | chr7.1:3419638-3419657 | None:intergenic | 40.0% | |
| TGCTACCATAATCAAGGTTG+TGG | - | chr7.1:3417973-3417992 | MS.gene050914:intron | 40.0% | |
| TTATGCTCGTATGAAGGAAG+AGG | + | chr7.1:3418895-3418914 | None:intergenic | 40.0% | |
| TTCGACGAAGAGATAAACCT+TGG | + | chr7.1:3417818-3417837 | None:intergenic | 40.0% | |
| TTCTTATAGGTTGTGGAGGA+TGG | - | chr7.1:3419566-3419585 | MS.gene050914:intron | 40.0% | |
| TTTGCCCCAACTTCTGATTA+AGG | - | chr7.1:3419515-3419534 | MS.gene050914:intron | 40.0% | |
| ! | AACAAGTAATTTGCAGCTGG+AGG | + | chr7.1:3418386-3418405 | None:intergenic | 40.0% |
| ! | ACAAGTAATTTGCAGCTGGA+GGG | + | chr7.1:3418385-3418404 | None:intergenic | 40.0% |
| ! | CAAAAGTACACGAAACACCT+CGG | + | chr7.1:3418802-3418821 | None:intergenic | 40.0% |
| ! | CTTGGTGATTATGTAGACAG+AGG | - | chr7.1:3418407-3418426 | MS.gene050914:CDS | 40.0% |
| ! | GGAGACTATATGCTTGCTTT+TGG | - | chr7.1:3418442-3418461 | MS.gene050914:CDS | 40.0% |
| ! | TCTCGAGTTGCAAGCAATAT+GGG | + | chr7.1:3419360-3419379 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTCCTGATGTCG+TGG | - | chr7.1:3418286-3418305 | MS.gene050914:intron | 40.0% |
| AACTGGAGGGATAAGACCAA+AGG | - | chr7.1:3417854-3417873 | MS.gene050914:intron | 45.0% | |
| ACCGTCCACAACCTTGATTA+TGG | + | chr7.1:3417981-3418000 | None:intergenic | 45.0% | |
| AGACAGAGGGAAGCAAAGTT+TGG | - | chr7.1:3418421-3418440 | MS.gene050914:CDS | 45.0% | |
| AGCAAAAGAACCACGACATC+AGG | + | chr7.1:3418299-3418318 | None:intergenic | 45.0% | |
| CTGCATGCAGGTGATATTCA+TGG | - | chr7.1:3418317-3418336 | MS.gene050914:CDS | 45.0% | |
| GCACGAAGATCGAGAAGAAT+AGG | + | chr7.1:3417441-3417460 | None:intergenic | 45.0% | |
| GCTCGTGTATAATTCGACTC+TGG | + | chr7.1:3419460-3419479 | None:intergenic | 45.0% | |
| GGAGGTTCAATGTTAGGCTA+TGG | - | chr7.1:3418564-3418583 | MS.gene050914:CDS | 45.0% | |
| GTGTATAATTCGACTCTGGC+TGG | + | chr7.1:3419456-3419475 | None:intergenic | 45.0% | |
| TACTAACCGCAAATGCGGAT+GGG | + | chr7.1:3417465-3417484 | None:intergenic | 45.0% | |
| TCATCAATGAGTGCAGCTAC+CGG | + | chr7.1:3418620-3418639 | None:intergenic | 45.0% | |
| TCCCGTTAGGAAAGATTGCA+TGG | - | chr7.1:3419201-3419220 | MS.gene050914:intron | 45.0% | |
| TTCTCTGCCCCAAATTATGG+CGG | - | chr7.1:3419626-3419645 | MS.gene050914:intron | 45.0% | |
| ! | CGAGAAGAATAGGTTGAGAG+AGG | + | chr7.1:3417431-3417450 | None:intergenic | 45.0% |
| ! | GTCTCGAGTTGCAAGCAATA+TGG | + | chr7.1:3419361-3419380 | None:intergenic | 45.0% |
| ! | TAACTTGGGGCTTCGATTTG+CGG | - | chr7.1:3419224-3419243 | MS.gene050914:intron | 45.0% |
| ! | TCTTATTTGCAGGGGTCATC+AGG | - | chr7.1:3418865-3418884 | MS.gene050914:intron | 45.0% |
| !! | CGAGGTGTTTCGTGTACTTT+TGG | - | chr7.1:3418800-3418819 | MS.gene050914:CDS | 45.0% |
| !! | TTAAATTAATGAAAATATTT+AGG | - | chr7.1:3419095-3419114 | MS.gene050914:intron | 5.0% |
| CCTACCGAAATTCCAGACAG+CGG | - | chr7.1:3418713-3418732 | MS.gene050914:CDS | 50.0% | |
| GATCCTGATCCTAACGCTGA+GGG | - | chr7.1:3418761-3418780 | MS.gene050914:CDS | 50.0% | |
| GTACTAACCGCAAATGCGGA+TGG | + | chr7.1:3417466-3417485 | None:intergenic | 50.0% | |
| GTCTCTTGTGCGATCTGCTT+TGG | - | chr7.1:3418735-3418754 | MS.gene050914:CDS | 50.0% | |
| TCTCTGCCCCAAATTATGGC+GGG | - | chr7.1:3419627-3419646 | MS.gene050914:intron | 50.0% | |
| TGATCCTAACGCTGAGGGTT+GGG | - | chr7.1:3418766-3418785 | MS.gene050914:CDS | 50.0% | |
| TGATCCTGATCCTAACGCTG+AGG | - | chr7.1:3418760-3418779 | MS.gene050914:CDS | 50.0% | |
| ! | GAGACCGCTGTCTGGAATTT+CGG | + | chr7.1:3418720-3418739 | None:intergenic | 50.0% |
| ! | GTGGTTCTTTTGCTGCATGC+AGG | - | chr7.1:3418305-3418324 | MS.gene050914:CDS | 50.0% |
| CAACCCTCAGCGTTAGGATC+AGG | + | chr7.1:3418767-3418786 | None:intergenic | 55.0% | |
| CTCTGCCCCAAATTATGGCG+GGG | - | chr7.1:3419628-3419647 | MS.gene050914:intron | 55.0% | |
| CTGATCCTAACGCTGAGGGT+TGG | - | chr7.1:3418765-3418784 | MS.gene050914:CDS | 55.0% | |
| GAGAGCCGACACATCTCCTT+TGG | + | chr7.1:3417873-3417892 | None:intergenic | 55.0% | |
| ! | CCGCTGTCTGGAATTTCGGT+AGG | + | chr7.1:3418716-3418735 | None:intergenic | 55.0% |
| CGTGCTCCCATCCGCATTTG+CGG | - | chr7.1:3417456-3417475 | MS.gene050914:CDS | 60.0% | |
| GGCGGGGAATTTGACAACGC+TGG | - | chr7.1:3419644-3419663 | MS.gene050914:intron | 60.0% | |
| GGTTGGGCAGATAGTGACCG+AGG | - | chr7.1:3418782-3418801 | MS.gene050914:CDS | 60.0% | |
| TCGCACAAGAGACCGCTGTC+TGG | + | chr7.1:3418728-3418747 | None:intergenic | 60.0% | |
| TCTGCCCAACCCTCAGCGTT+AGG | + | chr7.1:3418773-3418792 | None:intergenic | 60.0% | |
| TTTCTGCAGCCCCCTGCACA+GGG | - | chr7.1:3419857-3419876 | MS.gene050914:CDS | 60.0% | |
| ! | CTTGGGGCTTCGATTTGCGG+AGG | - | chr7.1:3419227-3419246 | MS.gene050914:intron | 60.0% |
| ! | TTTTCTGCAGCCCCCTGCAC+AGG | - | chr7.1:3419856-3419875 | MS.gene050914:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3417297 | 3419883 | 3417297 | ID=MS.gene050914 |
| chr7.1 | mRNA | 3417297 | 3419883 | 3417297 | ID=MS.gene050914.t1;Parent=MS.gene050914 |
| chr7.1 | exon | 3419703 | 3419883 | 3419703 | ID=MS.gene050914.t1.exon1;Parent=MS.gene050914.t1 |
| chr7.1 | CDS | 3419703 | 3419883 | 3419703 | ID=cds.MS.gene050914.t1;Parent=MS.gene050914.t1 |
| chr7.1 | exon | 3418294 | 3418853 | 3418294 | ID=MS.gene050914.t1.exon2;Parent=MS.gene050914.t1 |
| chr7.1 | CDS | 3418294 | 3418853 | 3418294 | ID=cds.MS.gene050914.t1;Parent=MS.gene050914.t1 |
| chr7.1 | exon | 3417411 | 3417605 | 3417411 | ID=MS.gene050914.t1.exon3;Parent=MS.gene050914.t1 |
| chr7.1 | CDS | 3417411 | 3417605 | 3417411 | ID=cds.MS.gene050914.t1;Parent=MS.gene050914.t1 |
| chr7.1 | exon | 3417297 | 3417314 | 3417297 | ID=MS.gene050914.t1.exon4;Parent=MS.gene050914.t1 |
| chr7.1 | CDS | 3417297 | 3417314 | 3417297 | ID=cds.MS.gene050914.t1;Parent=MS.gene050914.t1 |
| Gene Sequence |
| Protein sequence |
