Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000895.t1 | XP_003626230.2 | 98.4 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 8.40E-183 | 649.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000895.t1 | P48490 | 90.1 | 313 | 30 | 1 | 5 | 317 | 1 | 312 | 1.1e-170 | 600.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000895.t1 | G7KXK9 | 98.4 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 6.1e-183 | 649.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000895 | MS.gene49664 | PPI |
| MS.gene000895 | MS.gene039628 | PPI |
| MS.gene000895 | MS.gene007026 | PPI |
| MS.gene000895 | MS.gene058508 | PPI |
| MS.gene000895 | MS.gene032713 | PPI |
| MS.gene000895 | MS.gene06018 | PPI |
| MS.gene000895 | MS.gene50106 | PPI |
| MS.gene000895 | MS.gene63084 | PPI |
| MS.gene000895 | MS.gene23035 | PPI |
| MS.gene000895 | MS.gene048874 | PPI |
| MS.gene000895 | MS.gene55750 | PPI |
| MS.gene000895 | MS.gene32487 | PPI |
| MS.gene000895 | MS.gene99972 | PPI |
| MS.gene046213 | MS.gene000895 | PPI |
| MS.gene55751 | MS.gene000895 | PPI |
| MS.gene000895 | MS.gene63929 | PPI |
| MS.gene000895 | MS.gene23125 | PPI |
| MS.gene000895 | MS.gene050914 | PPI |
| MS.gene000895 | MS.gene88462 | PPI |
| MS.gene000895 | MS.gene25326 | PPI |
| MS.gene000895 | MS.gene29552 | PPI |
| MS.gene000895 | MS.gene61079 | PPI |
| MS.gene000895 | MS.gene58553 | PPI |
| MS.gene000895 | MS.gene89706 | PPI |
| MS.gene000895 | MS.gene072506 | PPI |
| MS.gene000895 | MS.gene93729 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000895.t1 | MTR_7g112870 | 98.423 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 0.0 | 640 |
| MS.gene000895.t1 | MTR_1g079950 | 75.235 | 319 | 73 | 2 | 1 | 313 | 26 | 344 | 0.0 | 506 |
| MS.gene000895.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 3.00e-180 | 501 |
| MS.gene000895.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 4.22e-180 | 500 |
| MS.gene000895.t1 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 9.36e-180 | 499 |
| MS.gene000895.t1 | MTR_7g116380 | 74.921 | 315 | 73 | 2 | 5 | 313 | 1 | 315 | 1.29e-177 | 494 |
| MS.gene000895.t1 | MTR_7g116380 | 74.921 | 315 | 73 | 2 | 5 | 313 | 1 | 315 | 1.90e-177 | 494 |
| MS.gene000895.t1 | MTR_8g098980 | 72.500 | 320 | 79 | 3 | 5 | 317 | 1 | 318 | 3.94e-177 | 493 |
| MS.gene000895.t1 | MTR_5g081230 | 76.923 | 299 | 66 | 1 | 5 | 300 | 17 | 315 | 5.71e-172 | 479 |
| MS.gene000895.t1 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 4.36e-171 | 478 |
| MS.gene000895.t1 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 8.44e-171 | 476 |
| MS.gene000895.t1 | MTR_1g043240 | 71.565 | 313 | 83 | 3 | 5 | 312 | 1 | 312 | 7.32e-169 | 472 |
| MS.gene000895.t1 | MTR_8g005010 | 74.048 | 289 | 73 | 1 | 10 | 296 | 4 | 292 | 7.08e-165 | 461 |
| MS.gene000895.t1 | MTR_1g079950 | 79.116 | 249 | 48 | 1 | 62 | 306 | 34 | 282 | 9.16e-151 | 426 |
| MS.gene000895.t1 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 1.91e-145 | 410 |
| MS.gene000895.t1 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 3.39e-145 | 409 |
| MS.gene000895.t1 | MTR_8g062430 | 46.154 | 299 | 154 | 3 | 10 | 307 | 7 | 299 | 1.23e-95 | 285 |
| MS.gene000895.t1 | MTR_7g107310 | 46.392 | 291 | 149 | 3 | 10 | 299 | 14 | 298 | 1.64e-94 | 283 |
| MS.gene000895.t1 | MTR_5g037200 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 2.02e-94 | 282 |
| MS.gene000895.t1 | MTR_5g093990 | 47.331 | 281 | 147 | 1 | 28 | 307 | 17 | 297 | 3.70e-93 | 279 |
| MS.gene000895.t1 | MTR_8g085610 | 46.392 | 291 | 149 | 3 | 10 | 299 | 9 | 293 | 3.90e-93 | 279 |
| MS.gene000895.t1 | MTR_8g085610 | 46.840 | 269 | 141 | 2 | 32 | 299 | 2 | 269 | 7.62e-90 | 270 |
| MS.gene000895.t1 | MTR_1g039380 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 7.21e-88 | 265 |
| MS.gene000895.t1 | MTR_1g039380 | 46.400 | 250 | 131 | 3 | 40 | 287 | 4 | 252 | 6.96e-85 | 257 |
| MS.gene000895.t1 | MTR_2g087530 | 47.078 | 308 | 144 | 6 | 8 | 296 | 639 | 946 | 5.09e-80 | 262 |
| MS.gene000895.t1 | MTR_1g089370 | 43.068 | 339 | 164 | 8 | 5 | 315 | 524 | 861 | 1.22e-79 | 259 |
| MS.gene000895.t1 | MTR_4g050540 | 46.926 | 309 | 145 | 6 | 7 | 296 | 643 | 951 | 3.47e-79 | 259 |
| MS.gene000895.t1 | MTR_2g087530 | 45.625 | 320 | 155 | 6 | 7 | 307 | 525 | 844 | 1.91e-78 | 256 |
| MS.gene000895.t1 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 169 | 446 | 2.38e-71 | 229 |
| MS.gene000895.t1 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 236 | 513 | 1.30e-70 | 228 |
| MS.gene000895.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 87 | 365 | 2.41e-68 | 219 |
| MS.gene000895.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 186 | 464 | 2.27e-67 | 219 |
| MS.gene000895.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 196 | 474 | 3.11e-67 | 219 |
| MS.gene000895.t1 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 157 | 435 | 3.52e-67 | 218 |
| MS.gene000895.t1 | MTR_2g100130 | 38.889 | 306 | 167 | 7 | 8 | 295 | 196 | 499 | 3.56e-67 | 219 |
| MS.gene000895.t1 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 157 | 459 | 7.43e-66 | 214 |
| MS.gene000895.t1 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 196 | 498 | 8.68e-66 | 215 |
| MS.gene000895.t1 | MTR_2g100130 | 41.111 | 270 | 150 | 6 | 8 | 270 | 196 | 463 | 9.35e-66 | 214 |
| MS.gene000895.t1 | MTR_2g100160 | 37.829 | 304 | 176 | 7 | 6 | 298 | 104 | 405 | 6.12e-61 | 200 |
| MS.gene000895.t1 | MTR_5g037200 | 49.730 | 185 | 87 | 2 | 10 | 193 | 7 | 186 | 8.71e-60 | 191 |
| MS.gene000895.t1 | MTR_8g072600 | 30.938 | 320 | 155 | 11 | 42 | 299 | 119 | 434 | 1.96e-34 | 130 |
| MS.gene000895.t1 | MTR_8g072600 | 32.900 | 231 | 115 | 7 | 42 | 236 | 119 | 345 | 2.64e-28 | 112 |
| MS.gene000895.t1 | MTR_2g099710 | 30.417 | 240 | 126 | 9 | 61 | 270 | 244 | 472 | 1.46e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000895.t1 | AT5G27840 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MS.gene000895.t1 | AT3G05580 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MS.gene000895.t1 | AT5G27840 | 87.742 | 310 | 38 | 0 | 1 | 310 | 5 | 314 | 0.0 | 567 |
| MS.gene000895.t1 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MS.gene000895.t1 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MS.gene000895.t1 | AT3G46820 | 75.166 | 302 | 71 | 1 | 2 | 299 | 6 | 307 | 7.12e-174 | 484 |
| MS.gene000895.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.61e-174 | 484 |
| MS.gene000895.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.61e-174 | 484 |
| MS.gene000895.t1 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.61e-174 | 484 |
| MS.gene000895.t1 | AT2G39840 | 76.254 | 299 | 68 | 1 | 5 | 300 | 14 | 312 | 1.28e-173 | 484 |
| MS.gene000895.t1 | AT2G29400 | 75.083 | 301 | 69 | 2 | 5 | 300 | 15 | 314 | 1.03e-172 | 481 |
| MS.gene000895.t1 | AT1G64040 | 72.013 | 318 | 84 | 2 | 5 | 317 | 1 | 318 | 1.37e-172 | 481 |
| MS.gene000895.t1 | AT4G11240 | 69.811 | 318 | 91 | 2 | 5 | 317 | 1 | 318 | 1.83e-169 | 473 |
| MS.gene000895.t1 | AT3G05580 | 89.516 | 248 | 26 | 0 | 1 | 248 | 5 | 252 | 1.76e-168 | 468 |
| MS.gene000895.t1 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 1.51e-166 | 466 |
| MS.gene000895.t1 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 3.21e-166 | 465 |
| MS.gene000895.t1 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 6.99e-166 | 464 |
| MS.gene000895.t1 | AT2G42500 | 47.635 | 296 | 147 | 4 | 6 | 299 | 9 | 298 | 8.97e-97 | 288 |
| MS.gene000895.t1 | AT5G55260 | 47.405 | 289 | 146 | 2 | 28 | 315 | 17 | 300 | 4.85e-96 | 286 |
| MS.gene000895.t1 | AT3G58500 | 47.079 | 291 | 147 | 3 | 10 | 299 | 14 | 298 | 1.95e-95 | 285 |
| MS.gene000895.t1 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 1.31e-94 | 283 |
| MS.gene000895.t1 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 1.31e-94 | 283 |
| MS.gene000895.t1 | AT1G69960 | 45.485 | 299 | 156 | 3 | 10 | 307 | 8 | 300 | 1.82e-94 | 282 |
| MS.gene000895.t1 | AT1G59830 | 45.485 | 299 | 156 | 3 | 10 | 307 | 7 | 299 | 8.11e-93 | 278 |
| MS.gene000895.t1 | AT4G26720 | 45.985 | 274 | 147 | 1 | 28 | 300 | 17 | 290 | 9.76e-93 | 278 |
| MS.gene000895.t1 | AT5G55260 | 41.515 | 330 | 146 | 3 | 28 | 315 | 17 | 341 | 1.28e-87 | 266 |
| MS.gene000895.t1 | AT3G19980 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 2.44e-87 | 264 |
| MS.gene000895.t1 | AT1G50370 | 44.286 | 280 | 148 | 4 | 10 | 287 | 3 | 276 | 2.50e-87 | 264 |
| MS.gene000895.t1 | AT1G59830 | 48.988 | 247 | 119 | 3 | 10 | 255 | 7 | 247 | 1.22e-81 | 248 |
| MS.gene000895.t1 | AT4G03080 | 45.779 | 308 | 150 | 7 | 5 | 296 | 526 | 832 | 1.72e-79 | 259 |
| MS.gene000895.t1 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 644 | 982 | 1.42e-77 | 255 |
| MS.gene000895.t1 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 649 | 987 | 1.49e-77 | 255 |
| MS.gene000895.t1 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 655 | 974 | 1.14e-76 | 253 |
| MS.gene000895.t1 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 660 | 979 | 1.18e-76 | 253 |
| MS.gene000895.t1 | AT1G03445 | 40.356 | 337 | 174 | 9 | 4 | 315 | 451 | 785 | 1.64e-76 | 249 |
| MS.gene000895.t1 | AT2G42500 | 50.455 | 220 | 107 | 2 | 81 | 299 | 33 | 251 | 2.57e-76 | 234 |
| MS.gene000895.t1 | AT1G03445 | 41.956 | 317 | 166 | 8 | 4 | 304 | 451 | 765 | 3.91e-76 | 248 |
| MS.gene000895.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.20e-69 | 224 |
| MS.gene000895.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.20e-69 | 224 |
| MS.gene000895.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.20e-69 | 224 |
| MS.gene000895.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 220 | 501 | 6.73e-69 | 224 |
| MS.gene000895.t1 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 221 | 502 | 7.41e-69 | 224 |
| MS.gene000895.t1 | AT2G42500 | 45.882 | 170 | 82 | 4 | 6 | 170 | 9 | 173 | 3.62e-46 | 154 |
| MS.gene000895.t1 | AT2G42500 | 45.763 | 177 | 84 | 5 | 6 | 177 | 9 | 178 | 4.65e-46 | 154 |
| MS.gene000895.t1 | AT2G42500 | 47.531 | 162 | 75 | 4 | 6 | 162 | 9 | 165 | 3.16e-45 | 152 |
| MS.gene000895.t1 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.44e-37 | 138 |
| MS.gene000895.t1 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.44e-37 | 138 |
| MS.gene000895.t1 | AT5G63870 | 34.513 | 226 | 113 | 5 | 51 | 241 | 73 | 298 | 2.97e-31 | 119 |
| MS.gene000895.t1 | AT1G48120 | 30.537 | 298 | 143 | 8 | 35 | 270 | 630 | 925 | 1.34e-26 | 110 |
| MS.gene000895.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 6.32e-21 | 93.6 |
| MS.gene000895.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 7.09e-21 | 93.6 |
| MS.gene000895.t1 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 8.11e-21 | 93.2 |
Find 71 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTCCCCGCCATAATT+TGG | 0.189229 | 7.4:+3803351 | None:intergenic |
| AAACCTGCTGATAAAGAATT+TGG | 0.231736 | 7.4:-3803270 | MS.gene000895:CDS |
| CGAGGTGTTTCGTGTACTTT+TGG | 0.244051 | 7.4:-3804181 | MS.gene000895:CDS |
| GCTGCAAATTACTTGTTTCT+TGG | 0.257569 | 7.4:-3804592 | MS.gene000895:CDS |
| ATATTCTCTGCCCCAAATTA+TGG | 0.268724 | 7.4:-3803363 | MS.gene000895:CDS |
| CAAATTCCCCGCCATAATTT+GGG | 0.269829 | 7.4:+3803352 | None:intergenic |
| GGTTTATCTTTGCATCTTCA+TGG | 0.299589 | 7.4:+3804470 | None:intergenic |
| GGAGACTATATGCTTGCTTT+TGG | 0.332948 | 7.4:-3804539 | MS.gene000895:CDS |
| ATGATCTTGATCTTATTTGC+AGG | 0.336140 | 7.4:-3804126 | MS.gene000895:CDS |
| GAGACCACTGTCTGGAATTT+CGG | 0.339758 | 7.4:+3804264 | None:intergenic |
| GCAAAGATAAACCGAATATA+TGG | 0.352537 | 7.4:-3804460 | MS.gene000895:CDS |
| GATAGAGTTTATCTCTTAAG+AGG | 0.369598 | 7.4:-3804496 | MS.gene000895:CDS |
| AGACAGAGGGAAGCAAAGTT+TGG | 0.370499 | 7.4:-3804560 | MS.gene000895:CDS |
| GTCTCTTGTGCGATCTGCTT+TGG | 0.374526 | 7.4:-3804246 | MS.gene000895:CDS |
| CAACCCTCAGCGTTAGGATC+AGG | 0.386986 | 7.4:+3804217 | None:intergenic |
| CGATTGCTTTAACTGTTTGC+CGG | 0.396470 | 7.4:-3804383 | MS.gene000895:CDS |
| AAGAAGATTGTTAGAAGGAA+AGG | 0.405161 | 7.4:-3805642 | MS.gene000895:CDS |
| TGATCCTAACGCTGAGGGTT+GGG | 0.410803 | 7.4:-3804215 | MS.gene000895:CDS |
| TCTTATTTGCAGGGGTCATC+AGG | 0.413370 | 7.4:-3804116 | MS.gene000895:intron |
| GTAAAAGGAGGTTCAATGTT+AGG | 0.413611 | 7.4:-3804423 | MS.gene000895:CDS |
| TTCTTATAGGTTGTGGAGGA+TGG | 0.418589 | 7.4:-3803420 | MS.gene000895:intron |
| GGCCTACAAAATAAGATATC+CGG | 0.419399 | 7.4:-3804518 | MS.gene000895:CDS |
| AACGACAATGGAAGGAGAAA+TGG | 0.424864 | 7.4:-3805690 | None:intergenic |
| GTGATAAGAAGATTGTTAGA+AGG | 0.438726 | 7.4:-3805647 | MS.gene000895:CDS |
| CTTCCAAATTCTTTATCAGC+AGG | 0.440807 | 7.4:+3803267 | None:intergenic |
| CGTGCTCCCATCCGCATTTG+CGG | 0.444802 | 7.4:-3805524 | MS.gene000895:intron |
| CTTAAGAGATAAACTCTATC+CGG | 0.451063 | 7.4:+3804499 | None:intergenic |
| GACTAGATCTATCCCTGTGC+AGG | 0.453447 | 7.4:+3803117 | None:intergenic |
| CTGCATGCAGGTGATATTCA+TGG | 0.458163 | 7.4:-3804664 | MS.gene000895:intron |
| TCTGCCCAACCCTCAGCGTT+AGG | 0.475726 | 7.4:+3804211 | None:intergenic |
| GCACGAAGATCGAGAAGAAT+AGG | 0.484459 | 7.4:+3805542 | None:intergenic |
| CGAGAAGAATAGGTTGAGAG+AGG | 0.490202 | 7.4:+3805552 | None:intergenic |
| AGAAGATTGTTAGAAGGAAA+GGG | 0.491790 | 7.4:-3805641 | MS.gene000895:CDS |
| GGAGGTTCAATGTTAGGCTA+TGG | 0.496598 | 7.4:-3804417 | MS.gene000895:CDS |
| CGGCAAACAGTTAAAGCAAT+CGG | 0.514394 | 7.4:+3804384 | None:intergenic |
| TCGCACAAGAGACCACTGTC+TGG | 0.516072 | 7.4:+3804256 | None:intergenic |
| TGATCTTGATCTTATTTGCA+GGG | 0.521526 | 7.4:-3804125 | MS.gene000895:CDS |
| GGAAGGAGAAATGGACAAAA+CGG | 0.528497 | 7.4:-3805681 | MS.gene000895:CDS |
| TACTAACCGCAAATGCGGAT+GGG | 0.543656 | 7.4:+3805518 | None:intergenic |
| CTGATCCTAACGCTGAGGGT+TGG | 0.544593 | 7.4:-3804216 | MS.gene000895:CDS |
| AGAAACAAGTAATTTGCAGC+TGG | 0.546090 | 7.4:+3804595 | None:intergenic |
| GGCATAGGAACGACAATGGA+AGG | 0.548710 | 7.4:-3805698 | None:intergenic |
| TAGATCTATCCCTGTGCAGG+GGG | 0.550107 | 7.4:+3803120 | None:intergenic |
| TCTCTGCCCCAAATTATGGC+GGG | 0.558401 | 7.4:-3803359 | MS.gene000895:CDS |
| AACCCTCAGCGTTAGGATCA+GGG | 0.560456 | 7.4:+3804218 | None:intergenic |
| GACCCTGATCCTAACGCTGA+GGG | 0.563933 | 7.4:-3804220 | MS.gene000895:CDS |
| AACAAGTAATTTGCAGCTGG+AGG | 0.567978 | 7.4:+3804598 | None:intergenic |
| TCATCAATGAGTGCAGCTAC+CGG | 0.570663 | 7.4:+3804364 | None:intergenic |
| GAGAAAATACTTTGTATGCA+TGG | 0.574695 | 7.4:-3804343 | MS.gene000895:CDS |
| TTGGTGATTATGTAGACAGA+GGG | 0.580074 | 7.4:-3804573 | MS.gene000895:CDS |
| ACTAGATCTATCCCTGTGCA+GGG | 0.580786 | 7.4:+3803118 | None:intergenic |
| CTCTGCCCCAAATTATGGCG+GGG | 0.582113 | 7.4:-3803358 | MS.gene000895:CDS |
| GTACTAACCGCAAATGCGGA+TGG | 0.584337 | 7.4:+3805517 | None:intergenic |
| GGCGGGGAATTTGACAACGC+TGG | 0.591736 | 7.4:-3803342 | MS.gene000895:CDS |
| AGATTGTTAGAAGGAAAGGG+AGG | 0.602378 | 7.4:-3805638 | MS.gene000895:CDS |
| CCACTGTCTGGAATTTCGGT+AGG | 0.602527 | 7.4:+3804268 | None:intergenic |
| TTCTCTGCCCCAAATTATGG+CGG | 0.611120 | 7.4:-3803360 | MS.gene000895:CDS |
| TTTACGATGAATGTAAAAGG+AGG | 0.613144 | 7.4:-3804435 | MS.gene000895:CDS |
| ACAAGTAATTTGCAGCTGGA+GGG | 0.614880 | 7.4:+3804599 | None:intergenic |
| CTTGGTGATTATGTAGACAG+AGG | 0.622438 | 7.4:-3804574 | MS.gene000895:CDS |
| ATCAGATAAGAGAGGTTACG+AGG | 0.624724 | 7.4:-3804291 | MS.gene000895:CDS |
| AAAAGTACTAACCGCAAATG+CGG | 0.624956 | 7.4:+3805513 | None:intergenic |
| AAATTCCCCGCCATAATTTG+GGG | 0.631186 | 7.4:+3803353 | None:intergenic |
| TGACCCTGATCCTAACGCTG+AGG | 0.633433 | 7.4:-3804221 | MS.gene000895:CDS |
| GATCTTGATCTTATTTGCAG+GGG | 0.650810 | 7.4:-3804124 | MS.gene000895:CDS |
| CTAGATCTATCCCTGTGCAG+GGG | 0.653548 | 7.4:+3803119 | None:intergenic |
| CAAAAGTACACGAAACACCT+CGG | 0.655383 | 7.4:+3804182 | None:intergenic |
| AAATTTAGATCAGATAAGAG+AGG | 0.664730 | 7.4:-3804299 | MS.gene000895:CDS |
| GGTTGGGCAGATAGTGACCG+AGG | 0.706364 | 7.4:-3804199 | MS.gene000895:CDS |
| AAAATACTTTGTATGCATGG+AGG | 0.710478 | 7.4:-3804340 | MS.gene000895:CDS |
| CCTACCGAAATTCCAGACAG+TGG | 0.737500 | 7.4:-3804268 | MS.gene000895:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATTTACTAAAAGT+TGG | - | chr7.4:3803867-3803886 | MS.gene000895:intron | 10.0% |
| !! | CTCAAAAAAAAAAAAAAAAT+TGG | - | chr7.4:3803901-3803920 | MS.gene000895:intron | 10.0% |
| !!! | CTATTTTTCAAAAATATATA+CGG | - | chr7.4:3803424-3803443 | MS.gene000895:intron | 10.0% |
| !! | ATATCAACTAATTTCAAAAT+GGG | + | chr7.4:3804859-3804878 | None:intergenic | 15.0% |
| !! | ATTATTCAGTTTCTATTAAA+TGG | + | chr7.4:3804048-3804067 | None:intergenic | 15.0% |
| !! | TATATCAACTAATTTCAAAA+TGG | + | chr7.4:3804860-3804879 | None:intergenic | 15.0% |
| !!! | ATCAAAAATGAATTTTAAGA+AGG | - | chr7.4:3805570-3805589 | MS.gene000895:CDS | 15.0% |
| !!! | TGCAATTTTTTTTTTCTTAT+AGG | - | chr7.4:3805375-3805394 | MS.gene000895:intron | 15.0% |
| !! | AAAATATTTAGGAATGAAAC+TGG | - | chr7.4:3804933-3804952 | MS.gene000895:intron | 20.0% |
| !! | AGATAAGAAAGTCAATATAT+TGG | + | chr7.4:3805239-3805258 | None:intergenic | 20.0% |
| !! | GTGTTTACAATTAAGAATAT+TGG | - | chr7.4:3803536-3803555 | MS.gene000895:intron | 20.0% |
| !! | TAAAACCTATATCAAACATA+TGG | - | chr7.4:3803833-3803852 | MS.gene000895:intron | 20.0% |
| !! | TTAAGAATATTGGTCATTTA+AGG | - | chr7.4:3803546-3803565 | MS.gene000895:intron | 20.0% |
| !! | TTTAATTCATGATAGATGAA+GGG | + | chr7.4:3803954-3803973 | None:intergenic | 20.0% |
| !!! | AAAAGTAACTAGATGAATTT+TGG | + | chr7.4:3804779-3804798 | None:intergenic | 20.0% |
| !!! | ATGAATTTTGGAAATTATGA+AGG | + | chr7.4:3804767-3804786 | None:intergenic | 20.0% |
| !!! | CATAGTCTTGTATATATATT+TGG | - | chr7.4:3805624-3805643 | MS.gene000895:CDS | 20.0% |
| !!! | TGATCTAAATTTTGTAATTC+AGG | + | chr7.4:3804501-3804520 | None:intergenic | 20.0% |
| !!! | TTATTGAGACTTTTTGAATA+TGG | - | chr7.4:3804180-3804199 | MS.gene000895:CDS | 20.0% |
| !!! | TTTTAAAATATTGCAGATAG+AGG | + | chr7.4:3804000-3804019 | None:intergenic | 20.0% |
| !!! | TTTTAATTCATGATAGATGA+AGG | + | chr7.4:3803955-3803974 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTATAGGTTG+TGG | - | chr7.4:3805381-3805400 | MS.gene000895:intron | 20.0% |
| !!! | TTTTTTTTTTTGAGCAATAC+AGG | + | chr7.4:3803895-3803914 | None:intergenic | 20.0% |
| ! | AAAATATATCACGAAAACCA+AGG | - | chr7.4:3803626-3803645 | MS.gene000895:intron | 25.0% |
| ! | AAATTTAGATCAGATAAGAG+AGG | - | chr7.4:3804509-3804528 | MS.gene000895:CDS | 25.0% |
| ! | CATCGTAAAAACCATATATT+CGG | + | chr7.4:3804362-3804381 | None:intergenic | 25.0% |
| ! | TAATTTAATGACCGTGATAA+AGG | + | chr7.4:3804910-3804929 | None:intergenic | 25.0% |
| ! | TCAAAAATATATACGGAGTT+TGG | - | chr7.4:3803431-3803450 | MS.gene000895:intron | 25.0% |
| ! | TTGAGAATTGTGGTTAAATA+TGG | - | chr7.4:3803742-3803761 | MS.gene000895:intron | 25.0% |
| !! | ATTAGTTGATATACAGTTTG+TGG | - | chr7.4:3804867-3804886 | MS.gene000895:intron | 25.0% |
| !! | GTAAATTTTGTTGAGAATTG+TGG | - | chr7.4:3803732-3803751 | MS.gene000895:intron | 25.0% |
| !! | GTTTTTACGATGAATGTAAA+AGG | - | chr7.4:3804370-3804389 | MS.gene000895:CDS | 25.0% |
| !! | TTTCTCTCTCTTTCAAATTT+TGG | - | chr7.4:3803330-3803349 | MS.gene000895:CDS | 25.0% |
| AAAATACTTTGTATGCATGG+AGG | - | chr7.4:3804468-3804487 | MS.gene000895:CDS | 30.0% | |
| AAACCTGCTGATAAAGAATT+TGG | - | chr7.4:3805538-3805557 | MS.gene000895:CDS | 30.0% | |
| AAGAAGATTGTTAGAAGGAA+AGG | - | chr7.4:3803166-3803185 | MS.gene000895:intron | 30.0% | |
| AGAAGATTGTTAGAAGGAAA+GGG | - | chr7.4:3803167-3803186 | MS.gene000895:intron | 30.0% | |
| ATGAAACTGGAACAATTAAG+TGG | - | chr7.4:3804946-3804965 | MS.gene000895:intron | 30.0% | |
| CAAAAAGTCTCAATAAGTCT+TGG | + | chr7.4:3804176-3804195 | None:intergenic | 30.0% | |
| CATCAGGAACAACAAAAAAT+AGG | + | chr7.4:3804110-3804129 | None:intergenic | 30.0% | |
| CTTAAGAGATAAACTCTATC+CGG | + | chr7.4:3804312-3804331 | None:intergenic | 30.0% | |
| GAGAAAATACTTTGTATGCA+TGG | - | chr7.4:3804465-3804484 | MS.gene000895:CDS | 30.0% | |
| GATAGAGTTTATCTCTTAAG+AGG | - | chr7.4:3804312-3804331 | MS.gene000895:CDS | 30.0% | |
| GCAAAGATAAACCGAATATA+TGG | - | chr7.4:3804348-3804367 | MS.gene000895:CDS | 30.0% | |
| GTGATAAGAAGATTGTTAGA+AGG | - | chr7.4:3803161-3803180 | MS.gene000895:intron | 30.0% | |
| TCTTGCCATATGTTTGATAT+AGG | + | chr7.4:3803841-3803860 | None:intergenic | 30.0% | |
| TGAAACTGGAACAATTAAGT+GGG | - | chr7.4:3804947-3804966 | MS.gene000895:intron | 30.0% | |
| TGAAAGAGAGAGAAAACAAA+AGG | + | chr7.4:3803325-3803344 | None:intergenic | 30.0% | |
| TTATCATTATGCTCGTATGA+AGG | + | chr7.4:3804728-3804747 | None:intergenic | 30.0% | |
| TTTACGATGAATGTAAAAGG+AGG | - | chr7.4:3804373-3804392 | MS.gene000895:CDS | 30.0% | |
| ! | ATGATCTTGATCTTATTTGC+AGG | - | chr7.4:3804682-3804701 | MS.gene000895:intron | 30.0% |
| ! | TGATCTTGATCTTATTTGCA+GGG | - | chr7.4:3804683-3804702 | MS.gene000895:intron | 30.0% |
| ! | TTGAGACTTTTTGAATATGG+TGG | - | chr7.4:3804183-3804202 | MS.gene000895:CDS | 30.0% |
| !!! | ATCCGGATATCTTATTTTGT+AGG | + | chr7.4:3804295-3804314 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTATAGGTTGTGG+AGG | - | chr7.4:3805384-3805403 | MS.gene000895:intron | 30.0% |
| AAAGATTGCATGGTAACTTG+GGG | - | chr7.4:3805038-3805057 | MS.gene000895:intron | 35.0% | |
| ACATCAAATTACATGGGAAC+TGG | - | chr7.4:3803665-3803684 | MS.gene000895:intron | 35.0% | |
| ATATTCTCTGCCCCAAATTA+TGG | - | chr7.4:3805445-3805464 | MS.gene000895:intron | 35.0% | |
| CGTCGAACATCAAATTACAT+GGG | - | chr7.4:3803659-3803678 | MS.gene000895:intron | 35.0% | |
| CTTCCAAATTCTTTATCAGC+AGG | + | chr7.4:3805544-3805563 | None:intergenic | 35.0% | |
| GAAAGATTGCATGGTAACTT+GGG | - | chr7.4:3805037-3805056 | MS.gene000895:intron | 35.0% | |
| GGAACAACAAAAAATAGGTG+TGG | + | chr7.4:3804105-3804124 | None:intergenic | 35.0% | |
| GGCCTACAAAATAAGATATC+CGG | - | chr7.4:3804290-3804309 | MS.gene000895:CDS | 35.0% | |
| GGTTTATCTTTGCATCTTCA+TGG | + | chr7.4:3804341-3804360 | None:intergenic | 35.0% | |
| GTAAAAGGAGGTTCAATGTT+AGG | - | chr7.4:3804385-3804404 | MS.gene000895:CDS | 35.0% | |
| TACCATGCAATCTTTCCTAA+CGG | + | chr7.4:3805033-3805052 | None:intergenic | 35.0% | |
| TCGTCGAACATCAAATTACA+TGG | - | chr7.4:3803658-3803677 | MS.gene000895:intron | 35.0% | |
| TGACATTGCTACCATAATCA+AGG | - | chr7.4:3803795-3803814 | MS.gene000895:intron | 35.0% | |
| TGAGACCTTAATCAGAAGTT+GGG | + | chr7.4:3805350-3805369 | None:intergenic | 35.0% | |
| ! | AGAAACAAGTAATTTGCAGC+TGG | + | chr7.4:3804216-3804235 | None:intergenic | 35.0% |
| ! | GATCTTGATCTTATTTGCAG+GGG | - | chr7.4:3804684-3804703 | MS.gene000895:intron | 35.0% |
| ! | GCTGCAAATTACTTGTTTCT+TGG | - | chr7.4:3804216-3804235 | MS.gene000895:CDS | 35.0% |
| ! | TTGGTGATTATGTAGACAGA+GGG | - | chr7.4:3804235-3804254 | MS.gene000895:CDS | 35.0% |
| !! | AAAAGTACTAACCGCAAATG+CGG | + | chr7.4:3803298-3803317 | None:intergenic | 35.0% |
| !!! | AAGCAAGTTTTTTTCCCGTT+AGG | - | chr7.4:3805015-3805034 | MS.gene000895:intron | 35.0% |
| !!! | TGATGTTGTCGCAGATTTTT+TGG | - | chr7.4:3804653-3804672 | MS.gene000895:CDS | 35.0% |
| AAATTCCCCGCCATAATTTG+GGG | + | chr7.4:3805458-3805477 | None:intergenic | 40.0% | |
| ACAATGTGAGTGATGCTAAG+AGG | + | chr7.4:3805105-3805124 | None:intergenic | 40.0% | |
| ACCATAATCAAGGTTGTGGA+CGG | - | chr7.4:3803805-3803824 | MS.gene000895:intron | 40.0% | |
| ACCATGCAATCTTTCCTAAC+GGG | + | chr7.4:3805032-3805051 | None:intergenic | 40.0% | |
| AGATTGTTAGAAGGAAAGGG+AGG | - | chr7.4:3803170-3803189 | MS.gene000895:intron | 40.0% | |
| AGTTTGTGGACTTCTGATAG+AGG | - | chr7.4:3804881-3804900 | MS.gene000895:intron | 40.0% | |
| ATCAGATAAGAGAGGTTACG+AGG | - | chr7.4:3804517-3804536 | MS.gene000895:CDS | 40.0% | |
| CAAATTACATGGGAACTGGA+GGG | - | chr7.4:3803669-3803688 | MS.gene000895:intron | 40.0% | |
| CAAATTCCCCGCCATAATTT+GGG | + | chr7.4:3805459-3805478 | None:intergenic | 40.0% | |
| CGATTGCTTTAACTGTTTGC+CGG | - | chr7.4:3804425-3804444 | MS.gene000895:CDS | 40.0% | |
| CGGCAAACAGTTAAAGCAAT+CGG | + | chr7.4:3804427-3804446 | None:intergenic | 40.0% | |
| GAATTGCATAGTGCAACTAC+AGG | + | chr7.4:3803929-3803948 | None:intergenic | 40.0% | |
| GAGACCTTAATCAGAAGTTG+GGG | + | chr7.4:3805349-3805368 | None:intergenic | 40.0% | |
| GATAGAGGCAACCTTTATCA+CGG | - | chr7.4:3804896-3804915 | MS.gene000895:intron | 40.0% | |
| GGAAAGATTGCATGGTAACT+TGG | - | chr7.4:3805036-3805055 | MS.gene000895:intron | 40.0% | |
| GGAAGGAGAAATGGACAAAA+CGG | - | chr7.4:3803127-3803146 | MS.gene000895:intron | 40.0% | |
| GTGAGACCTTAATCAGAAGT+TGG | + | chr7.4:3805351-3805370 | None:intergenic | 40.0% | |
| TAAGACCAAAGGAGATGTGT+CGG | - | chr7.4:3803693-3803712 | MS.gene000895:intron | 40.0% | |
| TCAAATTACATGGGAACTGG+AGG | - | chr7.4:3803668-3803687 | MS.gene000895:intron | 40.0% | |
| TCAAATTCCCCGCCATAATT+TGG | + | chr7.4:3805460-3805479 | None:intergenic | 40.0% | |
| TGCTACCATAATCAAGGTTG+TGG | - | chr7.4:3803801-3803820 | MS.gene000895:intron | 40.0% | |
| TTATGCTCGTATGAAGGAAG+AGG | + | chr7.4:3804722-3804741 | None:intergenic | 40.0% | |
| TTCGACGAAGAGATAAACCT+TGG | + | chr7.4:3803646-3803665 | None:intergenic | 40.0% | |
| TTCTTATAGGTTGTGGAGGA+TGG | - | chr7.4:3805388-3805407 | MS.gene000895:intron | 40.0% | |
| TTTGCCCCAACTTCTGATTA+AGG | - | chr7.4:3805342-3805361 | MS.gene000895:intron | 40.0% | |
| ! | AACAAGTAATTTGCAGCTGG+AGG | + | chr7.4:3804213-3804232 | None:intergenic | 40.0% |
| ! | ACAAGTAATTTGCAGCTGGA+GGG | + | chr7.4:3804212-3804231 | None:intergenic | 40.0% |
| ! | CAAAAGTACACGAAACACCT+CGG | + | chr7.4:3804629-3804648 | None:intergenic | 40.0% |
| ! | CTTGGTGATTATGTAGACAG+AGG | - | chr7.4:3804234-3804253 | MS.gene000895:CDS | 40.0% |
| ! | GGAGACTATATGCTTGCTTT+TGG | - | chr7.4:3804269-3804288 | MS.gene000895:CDS | 40.0% |
| !!! | TTTTGTTGTTCCTGATGTCG+TGG | - | chr7.4:3804113-3804132 | MS.gene000895:intron | 40.0% |
| AACTGGAGGGATAAGACCAA+AGG | - | chr7.4:3803682-3803701 | MS.gene000895:intron | 45.0% | |
| ACCGTCCACAACCTTGATTA+TGG | + | chr7.4:3803809-3803828 | None:intergenic | 45.0% | |
| AGACAGAGGGAAGCAAAGTT+TGG | - | chr7.4:3804248-3804267 | MS.gene000895:CDS | 45.0% | |
| AGCAAAAGAACCACGACATC+AGG | + | chr7.4:3804126-3804145 | None:intergenic | 45.0% | |
| CTGCATGCAGGTGATATTCA+TGG | - | chr7.4:3804144-3804163 | MS.gene000895:CDS | 45.0% | |
| GCACGAAGATCGAGAAGAAT+AGG | + | chr7.4:3803269-3803288 | None:intergenic | 45.0% | |
| GCTCGTGTATAATTCGACTC+TGG | + | chr7.4:3805287-3805306 | None:intergenic | 45.0% | |
| GGAGGTTCAATGTTAGGCTA+TGG | - | chr7.4:3804391-3804410 | MS.gene000895:CDS | 45.0% | |
| GTGTATAATTCGACTCTGGC+TGG | + | chr7.4:3805283-3805302 | None:intergenic | 45.0% | |
| TACTAACCGCAAATGCGGAT+GGG | + | chr7.4:3803293-3803312 | None:intergenic | 45.0% | |
| TCATCAATGAGTGCAGCTAC+CGG | + | chr7.4:3804447-3804466 | None:intergenic | 45.0% | |
| TCCCGTTAGGAAAGATTGCA+TGG | - | chr7.4:3805028-3805047 | MS.gene000895:intron | 45.0% | |
| TCTCGCGTTGCAAGCAATAT+GGG | + | chr7.4:3805187-3805206 | None:intergenic | 45.0% | |
| TTCTCTGCCCCAAATTATGG+CGG | - | chr7.4:3805448-3805467 | MS.gene000895:intron | 45.0% | |
| ! | CGAGAAGAATAGGTTGAGAG+AGG | + | chr7.4:3803259-3803278 | None:intergenic | 45.0% |
| ! | GAGACCACTGTCTGGAATTT+CGG | + | chr7.4:3804547-3804566 | None:intergenic | 45.0% |
| ! | TAACTTGGGGCTTCGATTTG+CGG | - | chr7.4:3805051-3805070 | MS.gene000895:intron | 45.0% |
| ! | TCTTATTTGCAGGGGTCATC+AGG | - | chr7.4:3804692-3804711 | MS.gene000895:intron | 45.0% |
| !! | CGAGGTGTTTCGTGTACTTT+TGG | - | chr7.4:3804627-3804646 | MS.gene000895:CDS | 45.0% |
| !! | TTAAATTAATGAAAATATTT+AGG | - | chr7.4:3804922-3804941 | MS.gene000895:intron | 5.0% |
| AACCCTCAGCGTTAGGATCA+GGG | + | chr7.4:3804593-3804612 | None:intergenic | 50.0% | |
| CCTACCGAAATTCCAGACAG+TGG | - | chr7.4:3804540-3804559 | MS.gene000895:CDS | 50.0% | |
| GTACTAACCGCAAATGCGGA+TGG | + | chr7.4:3803294-3803313 | None:intergenic | 50.0% | |
| GTCTCGCGTTGCAAGCAATA+TGG | + | chr7.4:3805188-3805207 | None:intergenic | 50.0% | |
| GTCTCTTGTGCGATCTGCTT+TGG | - | chr7.4:3804562-3804581 | MS.gene000895:CDS | 50.0% | |
| TCTCTGCCCCAAATTATGGC+GGG | - | chr7.4:3805449-3805468 | MS.gene000895:intron | 50.0% | |
| TGATCCTAACGCTGAGGGTT+GGG | - | chr7.4:3804593-3804612 | MS.gene000895:CDS | 50.0% | |
| ! | CCACTGTCTGGAATTTCGGT+AGG | + | chr7.4:3804543-3804562 | None:intergenic | 50.0% |
| ! | GTGGTTCTTTTGCTGCATGC+AGG | - | chr7.4:3804132-3804151 | MS.gene000895:CDS | 50.0% |
| CAACCCTCAGCGTTAGGATC+AGG | + | chr7.4:3804594-3804613 | None:intergenic | 55.0% | |
| CTCTGCCCCAAATTATGGCG+GGG | - | chr7.4:3805450-3805469 | MS.gene000895:intron | 55.0% | |
| CTGATCCTAACGCTGAGGGT+TGG | - | chr7.4:3804592-3804611 | MS.gene000895:CDS | 55.0% | |
| GACCCTGATCCTAACGCTGA+GGG | - | chr7.4:3804588-3804607 | MS.gene000895:CDS | 55.0% | |
| GAGAGCCGACACATCTCCTT+TGG | + | chr7.4:3803701-3803720 | None:intergenic | 55.0% | |
| TCGCACAAGAGACCACTGTC+TGG | + | chr7.4:3804555-3804574 | None:intergenic | 55.0% | |
| TGACCCTGATCCTAACGCTG+AGG | - | chr7.4:3804587-3804606 | MS.gene000895:CDS | 55.0% | |
| CGTGCTCCCATCCGCATTTG+CGG | - | chr7.4:3803284-3803303 | MS.gene000895:CDS | 60.0% | |
| GGCGGGGAATTTGACAACGC+TGG | - | chr7.4:3805466-3805485 | MS.gene000895:intron | 60.0% | |
| GGTTGGGCAGATAGTGACCG+AGG | - | chr7.4:3804609-3804628 | MS.gene000895:CDS | 60.0% | |
| TCTGCCCAACCCTCAGCGTT+AGG | + | chr7.4:3804600-3804619 | None:intergenic | 60.0% | |
| TTTCTGCAGCCCCCTGCACA+GGG | - | chr7.4:3805679-3805698 | MS.gene000895:CDS | 60.0% | |
| ! | CTTGGGGCTTCGATTTGCGG+AGG | - | chr7.4:3805054-3805073 | MS.gene000895:intron | 60.0% |
| ! | TTTTCTGCAGCCCCCTGCAC+AGG | - | chr7.4:3805678-3805697 | MS.gene000895:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3803125 | 3805705 | 3803125 | ID=MS.gene000895 |
| chr7.4 | mRNA | 3803125 | 3805705 | 3803125 | ID=MS.gene000895.t1;Parent=MS.gene000895 |
| chr7.4 | exon | 3805525 | 3805705 | 3805525 | ID=MS.gene000895.t1.exon1;Parent=MS.gene000895.t1 |
| chr7.4 | CDS | 3805525 | 3805705 | 3805525 | ID=cds.MS.gene000895.t1;Parent=MS.gene000895.t1 |
| chr7.4 | exon | 3804117 | 3804676 | 3804117 | ID=MS.gene000895.t1.exon2;Parent=MS.gene000895.t1 |
| chr7.4 | CDS | 3804117 | 3804676 | 3804117 | ID=cds.MS.gene000895.t1;Parent=MS.gene000895.t1 |
| chr7.4 | exon | 3803239 | 3803433 | 3803239 | ID=MS.gene000895.t1.exon3;Parent=MS.gene000895.t1 |
| chr7.4 | CDS | 3803239 | 3803433 | 3803239 | ID=cds.MS.gene000895.t1;Parent=MS.gene000895.t1 |
| chr7.4 | exon | 3803125 | 3803142 | 3803125 | ID=MS.gene000895.t1.exon4;Parent=MS.gene000895.t1 |
| chr7.4 | CDS | 3803125 | 3803142 | 3803125 | ID=cds.MS.gene000895.t1;Parent=MS.gene000895.t1 |
| Gene Sequence |
| Protein sequence |
