Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68086.t1 | XP_013469319.1 | 98.7 | 392 | 5 | 0 | 1 | 392 | 1 | 392 | 2.80E-228 | 800.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68086.t1 | Q8GYE0 | 64.6 | 373 | 127 | 3 | 4 | 372 | 5 | 376 | 3.4e-142 | 506.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68086.t1 | A0A072VNK4 | 98.7 | 392 | 5 | 0 | 1 | 392 | 1 | 392 | 2.0e-228 | 800.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04920 | MS.gene68086 | 0.816298 | 5.94E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene68086 | 0.862222 | 5.91E-64 | -1.69E-46 |
| MS.gene049499 | MS.gene68086 | 0.844179 | 8.88E-59 | -1.69E-46 |
| MS.gene049983 | MS.gene68086 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene050081 | MS.gene68086 | 0.802802 | 4.72E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene68086 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene68086 | 0.805181 | 1.51E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene68086 | 0.802955 | 4.39E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene68086 | 0.816706 | 4.82E-52 | -1.69E-46 |
| MS.gene052533 | MS.gene68086 | 0.815762 | 7.83E-52 | -1.69E-46 |
| MS.gene053298 | MS.gene68086 | 0.815924 | 7.20E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene68086 | 0.816095 | 6.60E-52 | -1.69E-46 |
| MS.gene053963 | MS.gene68086 | 0.861241 | 1.18E-63 | -1.69E-46 |
| MS.gene054222 | MS.gene68086 | 0.814191 | 1.75E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene68086 | 0.820196 | 7.79E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene68086 | 0.872927 | 2.18E-67 | -1.69E-46 |
| MS.gene054893 | MS.gene68086 | 0.879665 | 1.03E-69 | -1.69E-46 |
| MS.gene054957 | MS.gene68086 | 0.845793 | 3.25E-59 | -1.69E-46 |
| MS.gene055147 | MS.gene68086 | 0.831888 | 1.29E-55 | -1.69E-46 |
| MS.gene055148 | MS.gene68086 | 0.803639 | 3.17E-49 | -1.69E-46 |
| MS.gene055150 | MS.gene68086 | 0.816709 | 4.81E-52 | -1.69E-46 |
| MS.gene056071 | MS.gene68086 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene05624 | MS.gene68086 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene68086 | 0.802841 | 4.63E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene68086 | 0.833772 | 4.40E-56 | -1.69E-46 |
| MS.gene05686 | MS.gene68086 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene68086 | 0.810687 | 1.02E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene68086 | 0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene057155 | MS.gene68086 | 0.805065 | 1.60E-49 | -1.69E-46 |
| MS.gene057622 | MS.gene68086 | 0.840535 | 8.20E-58 | -1.69E-46 |
| MS.gene058095 | MS.gene68086 | 0.835024 | 2.13E-56 | -1.69E-46 |
| MS.gene058159 | MS.gene68086 | 0.826209 | 3.08E-54 | -1.69E-46 |
| MS.gene058429 | MS.gene68086 | 0.821547 | 3.81E-53 | -1.69E-46 |
| MS.gene058592 | MS.gene68086 | 0.82814 | 1.06E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene68086 | 0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene05878 | MS.gene68086 | 0.833356 | 5.59E-56 | -1.69E-46 |
| MS.gene05952 | MS.gene68086 | 0.85892 | 5.91E-63 | -1.69E-46 |
| MS.gene05956 | MS.gene68086 | 0.80556 | 1.26E-49 | -1.69E-46 |
| MS.gene059686 | MS.gene68086 | 0.822489 | 2.30E-53 | -1.69E-46 |
| MS.gene059774 | MS.gene68086 | 0.803302 | 3.72E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene68086 | -0.84246 | 2.55E-58 | -1.69E-46 |
| MS.gene059901 | MS.gene68086 | -0.815581 | 8.59E-52 | -1.69E-46 |
| MS.gene060412 | MS.gene68086 | 0.806819 | 6.83E-50 | -1.69E-46 |
| MS.gene060413 | MS.gene68086 | 0.81004 | 1.40E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene68086 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene060933 | MS.gene68086 | 0.828026 | 1.13E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene68086 | 0.812471 | 4.17E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene68086 | 0.83798 | 3.77E-57 | -1.69E-46 |
| MS.gene061188 | MS.gene68086 | 0.804164 | 2.46E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68086.t1 | MTR_1g090873 | 98.724 | 392 | 5 | 0 | 1 | 392 | 1 | 392 | 0.0 | 800 |
| MS.gene68086.t1 | MTR_1g090873 | 97.885 | 331 | 7 | 0 | 1 | 331 | 1 | 331 | 0.0 | 667 |
| MS.gene68086.t1 | MTR_4g084650 | 32.399 | 321 | 201 | 7 | 39 | 348 | 79 | 394 | 3.05e-51 | 177 |
| MS.gene68086.t1 | MTR_4g084650 | 33.667 | 300 | 183 | 7 | 39 | 327 | 79 | 373 | 6.71e-50 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68086.t1 | AT3G52190 | 64.267 | 375 | 129 | 3 | 3 | 373 | 4 | 377 | 5.37e-180 | 506 |
| MS.gene68086.t1 | AT5G50550 | 32.673 | 303 | 189 | 9 | 39 | 335 | 65 | 358 | 1.51e-42 | 153 |
| MS.gene68086.t1 | AT5G50650 | 32.673 | 303 | 189 | 9 | 39 | 335 | 65 | 358 | 1.51e-42 | 153 |
| MS.gene68086.t1 | AT2G01470 | 32.993 | 294 | 183 | 8 | 41 | 327 | 76 | 362 | 3.48e-39 | 144 |
Find 112 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAGCATGCGCATAATTT+TGG | 0.182728 | 1.1:-66516790 | MS.gene68086:CDS |
| ATGAGTTCATGGAACAAAAT+AGG | 0.220715 | 1.1:-66516029 | MS.gene68086:CDS |
| GGAACCAAACCATTTCTATT+TGG | 0.223219 | 1.1:-66516210 | MS.gene68086:CDS |
| CGGACAGATTTGTGTGCTTT+TGG | 0.240942 | 1.1:+66516762 | None:intergenic |
| TCGAGAACTCTGATTCGTTC+TGG | 0.241586 | 1.1:-66514078 | MS.gene68086:CDS |
| AATCTCAACCTAGTTGTTCT+TGG | 0.269966 | 1.1:-66518852 | MS.gene68086:CDS |
| CTCAGCTTCTAACACAAAAT+TGG | 0.284131 | 1.1:+66517877 | None:intergenic |
| AGATAACCTTTCCAATCTTT+AGG | 0.319043 | 1.1:+66514711 | None:intergenic |
| ACACAAATCTGTCCGGGATA+TGG | 0.322553 | 1.1:-66516754 | MS.gene68086:CDS |
| CGAGAACTCTGATTCGTTCT+GGG | 0.331945 | 1.1:-66514077 | MS.gene68086:CDS |
| GTAGACAAAGAAACGGTTAT+AGG | 0.338185 | 1.1:+66518774 | None:intergenic |
| CTGATGGTTCAGCGAGAATC+TGG | 0.344529 | 1.1:-66516434 | MS.gene68086:CDS |
| GGATGGACACCTCAGAATTA+TGG | 0.345586 | 1.1:-66516817 | MS.gene68086:CDS |
| AAATGGTTTGGTTCCATCCT+TGG | 0.346387 | 1.1:+66516218 | None:intergenic |
| CTGTAGAGGGGTTAGTTCCT+TGG | 0.349847 | 1.1:+66517021 | None:intergenic |
| CTCATCATTGGTTTAAACCT+TGG | 0.350046 | 1.1:+66514022 | None:intergenic |
| CTCAGGGTCCGGTTACTTGC+GGG | 0.357610 | 1.1:-66518896 | MS.gene68086:CDS |
| CTATTTGGCGCCGTTCAAAA+AGG | 0.360925 | 1.1:-66516195 | MS.gene68086:intron |
| TTCTTTGTCTACTTCCCCTT+TGG | 0.362793 | 1.1:-66518763 | MS.gene68086:intron |
| CACTAAAAGTAATACATGTC+TGG | 0.366135 | 1.1:+66516987 | None:intergenic |
| GATTGAGGGTCTCTCATCAT+TGG | 0.378056 | 1.1:+66514010 | None:intergenic |
| ATCCATGACCCGCAAGTAAC+CGG | 0.389128 | 1.1:+66518888 | None:intergenic |
| TGCAGATTGTTTGAGCTCTA+TGG | 0.390492 | 1.1:-66517070 | MS.gene68086:intron |
| CTCAATCATTTGATGATCAA+TGG | 0.390908 | 1.1:-66513994 | MS.gene68086:CDS |
| TAAGTCTCTTACAGCGGTTT+GGG | 0.395510 | 1.1:-66516054 | MS.gene68086:CDS |
| TTACTTGCGGGTCATGGATT+CGG | 0.400800 | 1.1:-66518884 | MS.gene68086:CDS |
| ATAAGTCTCTTACAGCGGTT+TGG | 0.404946 | 1.1:-66516055 | MS.gene68086:CDS |
| TGAGTTCATGGAACAAAATA+GGG | 0.405250 | 1.1:-66516028 | MS.gene68086:CDS |
| TCAATCATTTGATGATCAAT+GGG | 0.405468 | 1.1:-66513993 | MS.gene68086:CDS |
| AACTGAATGTACCTAAAGAT+TGG | 0.410490 | 1.1:-66514722 | MS.gene68086:CDS |
| GGTTTAAACCTTGGTCTAGC+TGG | 0.411531 | 1.1:+66514031 | None:intergenic |
| GGCGCCAAATAGAAATGGTT+TGG | 0.423691 | 1.1:+66516206 | None:intergenic |
| CGGTTTGGGATATGAGTTCA+TGG | 0.428050 | 1.1:-66516040 | MS.gene68086:CDS |
| GTCCGGTTACTTGCGGGTCA+TGG | 0.431039 | 1.1:-66518890 | MS.gene68086:CDS |
| GGTGTAGTCTCTTGCTATAA+TGG | 0.431141 | 1.1:+66515018 | None:intergenic |
| TGTAGAGGGGTTAGTTCCTT+GGG | 0.433022 | 1.1:+66517022 | None:intergenic |
| TGAACGGCGCCAAATAGAAA+TGG | 0.434674 | 1.1:+66516201 | None:intergenic |
| AGGACAAGAATTTCCACGCT+TGG | 0.440119 | 1.1:+66518824 | None:intergenic |
| ACTTACAACCTCAGTAGAAT+GGG | 0.444696 | 1.1:-66514760 | MS.gene68086:CDS |
| GAGAAAATCTGAAGCAAAGC+AGG | 0.450891 | 1.1:+66518804 | None:intergenic |
| TGCTGGATCACCTCAGGGTC+CGG | 0.464290 | 1.1:-66518907 | MS.gene68086:CDS |
| GGACAAGAATTTCCACGCTT+GGG | 0.465181 | 1.1:+66518825 | None:intergenic |
| TAGACAAAGAAACGGTTATA+GGG | 0.466115 | 1.1:+66518775 | None:intergenic |
| GAATGATGCTGGATCACCTC+AGG | 0.466193 | 1.1:-66518913 | MS.gene68086:CDS |
| TACTTACAACCTCAGTAGAA+TGG | 0.468911 | 1.1:-66514761 | MS.gene68086:CDS |
| GGGTGCACAGCAATAGCAAC+CGG | 0.474667 | 1.1:+66517845 | None:intergenic |
| CAAGGAACTAACCCCTCTAC+AGG | 0.483255 | 1.1:-66517020 | MS.gene68086:CDS |
| TTCGTTCTGGGGATTTCCAA+TGG | 0.491126 | 1.1:-66514065 | MS.gene68086:CDS |
| CTCAGTAGAATGGGGAGCAT+TGG | 0.494832 | 1.1:-66514751 | MS.gene68086:CDS |
| CTAACCCCTCTACAGGGTAT+TGG | 0.495022 | 1.1:-66517013 | MS.gene68086:CDS |
| ATATAGGTTCTTACAGAGAA+AGG | 0.496610 | 1.1:+66515946 | None:intergenic |
| CAAAAGCACACAAATCTGTC+CGG | 0.496650 | 1.1:-66516761 | MS.gene68086:CDS |
| CATTGATCATCAAATGATTG+AGG | 0.497207 | 1.1:+66513995 | None:intergenic |
| GGATCTAAATTTGCTGCTGG+TGG | 0.498037 | 1.1:-66516959 | MS.gene68086:CDS |
| CCTCAGGGTCCGGTTACTTG+CGG | 0.499353 | 1.1:-66518897 | MS.gene68086:CDS |
| CGGTACAACTATCGCAACAT+TGG | 0.505371 | 1.1:-66514994 | MS.gene68086:CDS |
| TCGTTCTGGGGATTTCCAAT+GGG | 0.509999 | 1.1:-66514064 | MS.gene68086:CDS |
| CTAGCTTCAACTTCTACTGA+TGG | 0.515435 | 1.1:-66516450 | MS.gene68086:CDS |
| GATGGATCTAAATTTGCTGC+TGG | 0.516767 | 1.1:-66516962 | MS.gene68086:CDS |
| ATTGATCATCAAATGATTGA+GGG | 0.517917 | 1.1:+66513996 | None:intergenic |
| TGCAGAGTGGCAGATATACT+TGG | 0.519271 | 1.1:-66514149 | MS.gene68086:intron |
| TCCAAAATTATGCGCATGCT+AGG | 0.524567 | 1.1:+66516789 | None:intergenic |
| ACTAAAAGTAATACATGTCT+GGG | 0.525288 | 1.1:+66516988 | None:intergenic |
| AGAAGCTGAGGAAGGTGATC+CGG | 0.530482 | 1.1:-66517864 | MS.gene68086:CDS |
| GAGAACTCTGATTCGTTCTG+GGG | 0.533273 | 1.1:-66514076 | MS.gene68086:CDS |
| TGGATTTCTGTCCTAGTGAA+AGG | 0.533688 | 1.1:-66514974 | MS.gene68086:intron |
| TAATGGCCGTTAGCCACGAC+GGG | 0.539256 | 1.1:-66515974 | MS.gene68086:CDS |
| TCAACCTAGTTGTTCTTGGA+AGG | 0.540778 | 1.1:-66518848 | MS.gene68086:CDS |
| AGACGCGGTCACATATCTAC+TGG | 0.544878 | 1.1:+66513968 | None:intergenic |
| ATTTGGATGGAGAATGATGC+TGG | 0.544930 | 1.1:-66518924 | None:intergenic |
| TGTACCTAAAATCCATATCC+CGG | 0.552105 | 1.1:+66516742 | None:intergenic |
| GATCTAAATTTGCTGCTGGT+GGG | 0.552966 | 1.1:-66516958 | MS.gene68086:CDS |
| GTATTTCCCGTCGTGGCTAA+CGG | 0.556419 | 1.1:+66515968 | None:intergenic |
| TGGGCCTTCCAAGAACAACT+AGG | 0.569955 | 1.1:+66518844 | None:intergenic |
| TAGAAAGTCTGCTTCAGTAA+TGG | 0.572648 | 1.1:-66515991 | MS.gene68086:CDS |
| GGAACAAAATAGGGCACAAG+AGG | 0.574914 | 1.1:-66516019 | MS.gene68086:CDS |
| AGAAACGGTTATAGGGTCAA+AGG | 0.575993 | 1.1:+66518782 | None:intergenic |
| AAAAGCACACAAATCTGTCC+GGG | 0.581294 | 1.1:-66516760 | MS.gene68086:CDS |
| CACATAAAATCATCACCGCT+AGG | 0.583548 | 1.1:+66517824 | None:intergenic |
| GACCACTCTGTCTCGCAACT+CGG | 0.583764 | 1.1:-66516388 | MS.gene68086:intron |
| TAAATTTGCTGCTGGTGGGT+CGG | 0.586472 | 1.1:-66516954 | MS.gene68086:intron |
| GTGGATATTTACCTTTCACT+AGG | 0.590688 | 1.1:+66514963 | None:intergenic |
| GGGAACCAATACCCTGTAGA+GGG | 0.595092 | 1.1:+66517008 | None:intergenic |
| AGGGGATAAGTCTCTTACAG+CGG | 0.605985 | 1.1:-66516060 | MS.gene68086:CDS |
| TTTATGTGCTCTTTGAGCAA+TGG | 0.610268 | 1.1:-66517809 | MS.gene68086:CDS |
| TTGCGAGACAGAGTGGTCAC+AGG | 0.610478 | 1.1:+66516393 | None:intergenic |
| AGGGGAAGTAGACAAAGAAA+CGG | 0.613448 | 1.1:+66518767 | None:intergenic |
| AATGTACCTAAAGATTGGAA+AGG | 0.615590 | 1.1:-66514717 | MS.gene68086:intron |
| ACATAAAATCATCACCGCTA+GGG | 0.616388 | 1.1:+66517825 | None:intergenic |
| TGGGAACCAATACCCTGTAG+AGG | 0.620085 | 1.1:+66517007 | None:intergenic |
| TTTGTGTTAGAAGCTGAGGA+AGG | 0.624346 | 1.1:-66517872 | MS.gene68086:CDS |
| GTAATGGCCGTTAGCCACGA+CGG | 0.633207 | 1.1:-66515975 | MS.gene68086:CDS |
| AGAATCTGGAAGGTTGAAGA+CGG | 0.646935 | 1.1:-66516420 | MS.gene68086:CDS |
| GAGAAAGGTATTTCCCGTCG+TGG | 0.646943 | 1.1:+66515961 | None:intergenic |
| AAACATGAAACTGTTGCCCA+AGG | 0.647320 | 1.1:-66517038 | MS.gene68086:CDS |
| GTTCTTGGAAGGCCCAAGCG+TGG | 0.648572 | 1.1:-66518837 | MS.gene68086:CDS |
| AAAATCAACCAGCTAGACCA+AGG | 0.649835 | 1.1:-66514039 | MS.gene68086:CDS |
| CAATGCTCCCCATTCTACTG+AGG | 0.662088 | 1.1:+66514752 | None:intergenic |
| TAGGCCACTCCATAATTCTG+AGG | 0.667952 | 1.1:+66516808 | None:intergenic |
| TGGTTCAGCGAGAATCTGGA+AGG | 0.668492 | 1.1:-66516430 | MS.gene68086:CDS |
| TACCGAGTTGCGAGACAGAG+TGG | 0.677017 | 1.1:+66516386 | None:intergenic |
| AAGGAACTAACCCCTCTACA+GGG | 0.679695 | 1.1:-66517019 | MS.gene68086:CDS |
| GACACCTCAGAATTATGGAG+TGG | 0.680012 | 1.1:-66516812 | MS.gene68086:CDS |
| AATGATGCTGGATCACCTCA+GGG | 0.681405 | 1.1:-66518912 | MS.gene68086:CDS |
| CCGCAAGTAACCGGACCCTG+AGG | 0.684658 | 1.1:+66518897 | None:intergenic |
| GGAACCAATACCCTGTAGAG+GGG | 0.704785 | 1.1:+66517009 | None:intergenic |
| GCTATTGCTGTGCACCCTAG+CGG | 0.708254 | 1.1:-66517839 | MS.gene68086:CDS |
| CAATCATTTGATGATCAATG+GGG | 0.709097 | 1.1:-66513992 | MS.gene68086:CDS |
| CTTACAACCTCAGTAGAATG+GGG | 0.712274 | 1.1:-66514759 | MS.gene68086:CDS |
| ATTGAAGAGGAATACCAAAG+GGG | 0.723778 | 1.1:+66518749 | None:intergenic |
| ATGTTGCGATAGTTGTACCG+AGG | 0.735547 | 1.1:+66514997 | None:intergenic |
| TATAGCAAGAGACTACACCT+CGG | 0.778640 | 1.1:-66515014 | MS.gene68086:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAATTAATTTTTATAT+TGG | + | chr1.1:66515519-66515538 | None:intergenic | 0.0% |
| !! | TTCTAAACTTAAAATAAAAA+GGG | + | chr1.1:66514241-66514260 | None:intergenic | 10.0% |
| !! | TTTCTAAACTTAAAATAAAA+AGG | + | chr1.1:66514242-66514261 | None:intergenic | 10.0% |
| !! | ATATAAGTATTTATGCTATA+AGG | + | chr1.1:66514349-66514368 | None:intergenic | 15.0% |
| !! | TATAAGTATTTATGCTATAA+GGG | + | chr1.1:66514348-66514367 | None:intergenic | 15.0% |
| !! | TTAAACATATTTAAGTCATT+TGG | - | chr1.1:66516997-66517016 | MS.gene68086:CDS | 15.0% |
| !!! | AAAAAGAAAATTTTGGATAA+AGG | + | chr1.1:66516618-66516637 | None:intergenic | 15.0% |
| !!! | AAAAGAAAATTTTGGATAAA+GGG | + | chr1.1:66516617-66516636 | None:intergenic | 15.0% |
| !!! | AGTTTACCTTTTAAAATAAT+TGG | + | chr1.1:66517739-66517758 | None:intergenic | 15.0% |
| !!! | ATTAGTCCAATTATTTTAAA+AGG | - | chr1.1:66517730-66517749 | MS.gene68086:intron | 15.0% |
| !!! | ATTATTTCTGTTATATTCTA+TGG | + | chr1.1:66518266-66518285 | None:intergenic | 15.0% |
| !!! | TTAATTTTAAACACAAATTG+TGG | + | chr1.1:66518499-66518518 | None:intergenic | 15.0% |
| !!! | TTTATGTGAGTTTTTTAAAA+AGG | - | chr1.1:66517310-66517329 | MS.gene68086:intron | 15.0% |
| !!! | TTTTTCAAAAATGATATTGA+GGG | - | chr1.1:66515558-66515577 | MS.gene68086:intron | 15.0% |
| !!! | TTTTTTCAAAAATGATATTG+AGG | - | chr1.1:66515557-66515576 | MS.gene68086:intron | 15.0% |
| !! | AAAAACTGTGCAAAAAAATT+TGG | + | chr1.1:66515330-66515349 | None:intergenic | 20.0% |
| !! | AAAACTATAATTGTAAGGAA+AGG | + | chr1.1:66517247-66517266 | None:intergenic | 20.0% |
| !! | AAACTATATGTATATGTATG+TGG | - | chr1.1:66514172-66514191 | MS.gene68086:intron | 20.0% |
| !! | AACAAAAATCAACATCAATT+CGG | - | chr1.1:66518304-66518323 | MS.gene68086:intron | 20.0% |
| !! | AACAAATTTCGAAAACAATA+TGG | + | chr1.1:66518649-66518668 | None:intergenic | 20.0% |
| !! | AACTATATGTATATGTATGT+GGG | - | chr1.1:66514173-66514192 | MS.gene68086:intron | 20.0% |
| !! | ATTCCAAAACTATAATTGTA+AGG | + | chr1.1:66517252-66517271 | None:intergenic | 20.0% |
| !! | CAAATTGAATTTGAATTGTT+TGG | - | chr1.1:66515468-66515487 | MS.gene68086:intron | 20.0% |
| !! | TAAAAGTTTAAAAAATGCAG+TGG | - | chr1.1:66518024-66518043 | MS.gene68086:intron | 20.0% |
| !! | TTTCATGAAATATTTGAGAA+GGG | - | chr1.1:66517364-66517383 | MS.gene68086:intron | 20.0% |
| !!! | AAAGAAAATTTTGGATAAAG+GGG | + | chr1.1:66516616-66516635 | None:intergenic | 20.0% |
| !!! | AAGAGACAAAAAGAAAATTT+TGG | + | chr1.1:66516625-66516644 | None:intergenic | 20.0% |
| !!! | AATTTTCTTTTTGTCTCTTT+AGG | - | chr1.1:66516626-66516645 | MS.gene68086:intron | 20.0% |
| !!! | AGCTTTTATTATTTTATGCA+GGG | - | chr1.1:66518107-66518126 | MS.gene68086:intron | 20.0% |
| !!! | ATTAGAATTTAGAATTCTAC+TGG | + | chr1.1:66516233-66516252 | None:intergenic | 20.0% |
| !!! | ATTGTCCTTTAAAAAGTTAA+AGG | + | chr1.1:66515284-66515303 | None:intergenic | 20.0% |
| !!! | CATAGTTTTGTAAATATTAG+TGG | - | chr1.1:66517683-66517702 | MS.gene68086:intron | 20.0% |
| !!! | GGTATAGTCTTTTTTATTTA+AGG | - | chr1.1:66516527-66516546 | MS.gene68086:intron | 20.0% |
| !!! | TAAACTTTTGTGAGATTATT+AGG | + | chr1.1:66514623-66514642 | None:intergenic | 20.0% |
| !!! | TAGTTTTGGAATTGTTTATA+AGG | - | chr1.1:66517260-66517279 | MS.gene68086:intron | 20.0% |
| !!! | TTTCCTTACAATTATAGTTT+TGG | - | chr1.1:66517246-66517265 | MS.gene68086:intron | 20.0% |
| !!! | TTTTCATGAAATATTTGAGA+AGG | - | chr1.1:66517363-66517382 | MS.gene68086:intron | 20.0% |
| ! | AAAGCTACTACTTTAAGTAA+CGG | - | chr1.1:66515230-66515249 | MS.gene68086:intron | 25.0% |
| ! | AATGGTTAATGAATATGACA+TGG | - | chr1.1:66518373-66518392 | MS.gene68086:intron | 25.0% |
| ! | AATTAGAAATGAGCATCATA+AGG | + | chr1.1:66517188-66517207 | None:intergenic | 25.0% |
| ! | AATTTCGAAAACAATATGGA+TGG | + | chr1.1:66518645-66518664 | None:intergenic | 25.0% |
| ! | ACAGCATAAAAACAATTTGT+TGG | + | chr1.1:66515984-66516003 | None:intergenic | 25.0% |
| ! | ACTAAAAGTAATACATGTCT+GGG | + | chr1.1:66515909-66515928 | None:intergenic | 25.0% |
| ! | ATATAGTTTGAGAATTGAAG+AGG | + | chr1.1:66514161-66514180 | None:intergenic | 25.0% |
| ! | ATTATTCATAAAAGAGAGCA+AGG | + | chr1.1:66515154-66515173 | None:intergenic | 25.0% |
| ! | ATTGATCATCAAATGATTGA+GGG | + | chr1.1:66518901-66518920 | None:intergenic | 25.0% |
| ! | CTACTCTTAAGAAATAAGTA+CGG | + | chr1.1:66515747-66515766 | None:intergenic | 25.0% |
| ! | GATGGTTAATGAATATAACA+AGG | + | chr1.1:66518586-66518605 | None:intergenic | 25.0% |
| ! | GCATAAAATAATAAAAGCTC+AGG | + | chr1.1:66518106-66518125 | None:intergenic | 25.0% |
| ! | TAAACATTCGTGAGATTATT+AGG | + | chr1.1:66514734-66514753 | None:intergenic | 25.0% |
| ! | TAAGCATTTGTGAGATTATT+AGG | + | chr1.1:66514507-66514526 | None:intergenic | 25.0% |
| ! | TAATCATGATTAAGTCATCT+AGG | - | chr1.1:66517086-66517105 | MS.gene68086:intron | 25.0% |
| ! | TATTTAAGCTATAAGCTGTA+AGG | - | chr1.1:66514649-66514668 | MS.gene68086:intron | 25.0% |
| ! | TTGAGCAAAAGAAAATGATT+TGG | + | chr1.1:66517124-66517143 | None:intergenic | 25.0% |
| !! | ATCAGATCTCTGTAATTTTA+GGG | - | chr1.1:66517801-66517820 | MS.gene68086:CDS | 25.0% |
| !! | GTGTATGACATAATAGTTTT+AGG | - | chr1.1:66515376-66515395 | MS.gene68086:intron | 25.0% |
| !! | TCAATCATTTGATGATCAAT+GGG | - | chr1.1:66518901-66518920 | MS.gene68086:CDS | 25.0% |
| !! | TGGATTTGAACAAATACTTT+TGG | - | chr1.1:66517476-66517495 | MS.gene68086:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1.1:66514320-66514339 | None:intergenic | 25.0% |
| !!! | AAAATGATTTGGTAATCTCT+AGG | + | chr1.1:66517113-66517132 | None:intergenic | 25.0% |
| !!! | ATCATGTTTATTTTATCACG+TGG | + | chr1.1:66518467-66518486 | None:intergenic | 25.0% |
| !!! | CTGTTCCTTTAACTTTTTAA+AGG | - | chr1.1:66515276-66515295 | MS.gene68086:intron | 25.0% |
| !!! | CTTTTTTATTTAAGGACCTT+TGG | - | chr1.1:66516535-66516554 | MS.gene68086:intron | 25.0% |
| !!! | GAGAAAGTTATAGCTATTTT+AGG | - | chr1.1:66517340-66517359 | MS.gene68086:intron | 25.0% |
| !!! | GAGCTTTTATTATTTTATGC+AGG | - | chr1.1:66518106-66518125 | MS.gene68086:intron | 25.0% |
| !!! | TGGTTTTAATCTTGAGTTTT+TGG | - | chr1.1:66514927-66514946 | MS.gene68086:intron | 25.0% |
| !!! | TGTATTACTTTTAGTGTTGA+TGG | - | chr1.1:66515914-66515933 | MS.gene68086:intron | 25.0% |
| AAAATCAACATCAATTCGGA+TGG | - | chr1.1:66518308-66518327 | MS.gene68086:intron | 30.0% | |
| AACTGAATGTACCTAAAGAT+TGG | - | chr1.1:66518172-66518191 | MS.gene68086:intron | 30.0% | |
| AAGACAGAAGTAAAACATAC+AGG | + | chr1.1:66516046-66516065 | None:intergenic | 30.0% | |
| AATGAACACCTGAAAAATCA+TGG | - | chr1.1:66518518-66518537 | MS.gene68086:intron | 30.0% | |
| AATGTACCTAAAGATTGGAA+AGG | - | chr1.1:66518177-66518196 | MS.gene68086:intron | 30.0% | |
| AATTGAAGAGGAATACCAAA+GGG | + | chr1.1:66514149-66514168 | None:intergenic | 30.0% | |
| AGATAACCTTTCCAATCTTT+AGG | + | chr1.1:66518186-66518205 | None:intergenic | 30.0% | |
| AGGATTTATGTTCGAATTGA+CGG | + | chr1.1:66517643-66517662 | None:intergenic | 30.0% | |
| ATATAGGTTCTTACAGAGAA+AGG | + | chr1.1:66516951-66516970 | None:intergenic | 30.0% | |
| ATGAGTTCATGGAACAAAAT+AGG | - | chr1.1:66516865-66516884 | MS.gene68086:intron | 30.0% | |
| ATTTCTCAGCTAAAACCAAA+AGG | + | chr1.1:66514842-66514861 | None:intergenic | 30.0% | |
| CAAAACAATTGATATGTGCA+AGG | + | chr1.1:66516977-66516996 | None:intergenic | 30.0% | |
| CACTAAAAGTAATACATGTC+TGG | + | chr1.1:66515910-66515929 | None:intergenic | 30.0% | |
| CATTGATCATCAAATGATTG+AGG | + | chr1.1:66518902-66518921 | None:intergenic | 30.0% | |
| GATATGTGCAAGGTAAATAT+AGG | + | chr1.1:66516967-66516986 | None:intergenic | 30.0% | |
| GCTTATATGTTATAAGCTTG+CGG | - | chr1.1:66515701-66515720 | MS.gene68086:intron | 30.0% | |
| GGCCTAAAATTTCAATCTAT+TGG | - | chr1.1:66518045-66518064 | MS.gene68086:intron | 30.0% | |
| GTGTGGTTAATTACATTTAG+CGG | - | chr1.1:66518540-66518559 | MS.gene68086:intron | 30.0% | |
| GTTAAAGGAACAGAAAATGT+TGG | + | chr1.1:66515269-66515288 | None:intergenic | 30.0% | |
| GTTAATGTCGTTCAAATATG+TGG | - | chr1.1:66518334-66518353 | MS.gene68086:intron | 30.0% | |
| TAAACACAAATTGTGGTCAA+TGG | + | chr1.1:66518492-66518511 | None:intergenic | 30.0% | |
| TAGACAAAGAAACGGTTATA+GGG | + | chr1.1:66514122-66514141 | None:intergenic | 30.0% | |
| TATATTCTATGGTCTCAGAA+AGG | + | chr1.1:66518255-66518274 | None:intergenic | 30.0% | |
| TATCCCCTAATCAAAATTAG+AGG | + | chr1.1:66516822-66516841 | None:intergenic | 30.0% | |
| TATGCCTGTATATAACCTAT+AGG | - | chr1.1:66514525-66514544 | MS.gene68086:intron | 30.0% | |
| TCAAGTATGACCTTAATCAT+TGG | - | chr1.1:66516794-66516813 | MS.gene68086:CDS | 30.0% | |
| TCACGAATGTTTATACAAGT+AGG | - | chr1.1:66514741-66514760 | MS.gene68086:CDS | 30.0% | |
| TGAAGTAGAACTGTTAGTAA+CGG | + | chr1.1:66515672-66515691 | None:intergenic | 30.0% | |
| TGACAAAACGAAAGACAATA+CGG | + | chr1.1:66516400-66516419 | None:intergenic | 30.0% | |
| TGAGTTCATGGAACAAAATA+GGG | - | chr1.1:66516866-66516885 | MS.gene68086:intron | 30.0% | |
| TTGACTATAACGATTCTGAA+AGG | + | chr1.1:66517663-66517682 | None:intergenic | 30.0% | |
| TTGCAGTTGTATATAGACTA+TGG | - | chr1.1:66514294-66514313 | MS.gene68086:intron | 30.0% | |
| TTTAAGTCATTTGGATAGCA+AGG | - | chr1.1:66517006-66517025 | MS.gene68086:CDS | 30.0% | |
| TTTATTTAAGGACCTTTGGA+AGG | - | chr1.1:66516539-66516558 | MS.gene68086:intron | 30.0% | |
| TTTCTCAGCTAAAACCAAAA+GGG | + | chr1.1:66514841-66514860 | None:intergenic | 30.0% | |
| TTTGTCATATCTCAGAACTA+AGG | - | chr1.1:66517425-66517444 | MS.gene68086:intron | 30.0% | |
| ! | ACGATTGTGAATGTGTTTTA+TGG | + | chr1.1:66518232-66518251 | None:intergenic | 30.0% |
| ! | ACTAAGAGAACTGGTTTATT+AGG | + | chr1.1:66518071-66518090 | None:intergenic | 30.0% |
| ! | AGATGAATGCATCTTTTAGA+AGG | + | chr1.1:66516204-66516223 | None:intergenic | 30.0% |
| ! | ATCATTCATGAACACACTTT+TGG | - | chr1.1:66517979-66517998 | MS.gene68086:intron | 30.0% |
| ! | CAATCATTTGATGATCAATG+GGG | - | chr1.1:66518902-66518921 | MS.gene68086:CDS | 30.0% |
| ! | CATCAGATCTCTGTAATTTT+AGG | - | chr1.1:66517800-66517819 | MS.gene68086:CDS | 30.0% |
| ! | CTAATTTTATCTGTGATGCA+CGG | + | chr1.1:66517715-66517734 | None:intergenic | 30.0% |
| ! | CTCAATCATTTGATGATCAA+TGG | - | chr1.1:66518900-66518919 | MS.gene68086:CDS | 30.0% |
| ! | GATACTCATACCTTTTTGAA+CGG | + | chr1.1:66516712-66516731 | None:intergenic | 30.0% |
| ! | GGCCAATAGATTGAAATTTT+AGG | + | chr1.1:66518050-66518069 | None:intergenic | 30.0% |
| ! | TCATTCATGAACACACTTTT+GGG | - | chr1.1:66517980-66517999 | MS.gene68086:intron | 30.0% |
| ! | TTTAGCGGATGATTAATGAT+TGG | - | chr1.1:66518555-66518574 | MS.gene68086:intron | 30.0% |
| ! | TTTTTCCTGAACAAGATTGT+TGG | - | chr1.1:66514865-66514884 | MS.gene68086:intron | 30.0% |
| !! | AACAACTAGGTTGAGATTTT+CGG | + | chr1.1:66514040-66514059 | None:intergenic | 30.0% |
| !! | ATAATTCTGCTTTTGAAGAG+TGG | - | chr1.1:66514907-66514926 | MS.gene68086:intron | 30.0% |
| !! | ATTAGAGGTACCAATGATTA+AGG | + | chr1.1:66516807-66516826 | None:intergenic | 30.0% |
| !! | GAGTTTTTGGATCATGTAAT+TGG | - | chr1.1:66514940-66514959 | MS.gene68086:intron | 30.0% |
| !! | TTATTTTGTGCATTCCCTTT+TGG | - | chr1.1:66514824-66514843 | MS.gene68086:intron | 30.0% |
| !!! | AATTGTTTTTATGCTGTGTG+TGG | - | chr1.1:66515987-66516006 | MS.gene68086:CDS | 30.0% |
| !!! | AATTTTAGGGCAAGTAAAGA+TGG | - | chr1.1:66517814-66517833 | MS.gene68086:CDS | 30.0% |
| !!! | AGATATACTTGGTGCTTTTA+GGG | - | chr1.1:66518756-66518775 | MS.gene68086:intron | 30.0% |
| !!! | GGTACCTCTAATTTTGATTA+GGG | - | chr1.1:66516815-66516834 | MS.gene68086:CDS | 30.0% |
| !!! | GTACCTCTAATTTTGATTAG+GGG | - | chr1.1:66516816-66516835 | MS.gene68086:CDS | 30.0% |
| !!! | TAATAGTTTTAGGCTCAGTT+TGG | - | chr1.1:66515386-66515405 | MS.gene68086:intron | 30.0% |
| !!! | TGAATTATGTCGATTTTCCA+AGG | - | chr1.1:66516659-66516678 | MS.gene68086:intron | 30.0% |
| !!! | TGGTACCTCTAATTTTGATT+AGG | - | chr1.1:66516814-66516833 | MS.gene68086:CDS | 30.0% |
| !!! | TTTAGGGCTATTTTTAGTGT+CGG | - | chr1.1:66518772-66518791 | MS.gene68086:CDS | 30.0% |
| AAATCTTCAGATCCTTCCAA+AGG | + | chr1.1:66516554-66516573 | None:intergenic | 35.0% | |
| AATCTAAACCATAGAACTCG+AGG | + | chr1.1:66515785-66515804 | None:intergenic | 35.0% | |
| AATCTCAACCTAGTTGTTCT+TGG | - | chr1.1:66514042-66514061 | MS.gene68086:CDS | 35.0% | |
| ACAGCCTATAGGTTATATAC+AGG | + | chr1.1:66514532-66514551 | None:intergenic | 35.0% | |
| ACAGTTTATGAACATGCCAT+AGG | - | chr1.1:66514477-66514496 | MS.gene68086:intron | 35.0% | |
| ACATAAAATCATCACCGCTA+GGG | + | chr1.1:66515072-66515091 | None:intergenic | 35.0% | |
| ACTTACAACCTCAGTAGAAT+GGG | - | chr1.1:66518134-66518153 | MS.gene68086:intron | 35.0% | |
| AGATATGACAAACATGGCAT+GGG | + | chr1.1:66517417-66517436 | None:intergenic | 35.0% | |
| AGCTCAAGATTATACAAGCA+AGG | + | chr1.1:66517780-66517799 | None:intergenic | 35.0% | |
| ATATAGACTATGGCCATGTT+TGG | - | chr1.1:66514304-66514323 | MS.gene68086:intron | 35.0% | |
| ATTGAAGAGGAATACCAAAG+GGG | + | chr1.1:66514148-66514167 | None:intergenic | 35.0% | |
| CTCAGCTTCTAACACAAAAT+TGG | + | chr1.1:66515020-66515039 | None:intergenic | 35.0% | |
| CTCCTTAGTCTAATTATTGC+AGG | + | chr1.1:66516297-66516316 | None:intergenic | 35.0% | |
| GAATTGAAGAGGAATACCAA+AGG | + | chr1.1:66514150-66514169 | None:intergenic | 35.0% | |
| GGAACCAAACCATTTCTATT+TGG | - | chr1.1:66516684-66516703 | MS.gene68086:intron | 35.0% | |
| GTAGACAAAGAAACGGTTAT+AGG | + | chr1.1:66514123-66514142 | None:intergenic | 35.0% | |
| GTGGATATTTACCTTTCACT+AGG | + | chr1.1:66517934-66517953 | None:intergenic | 35.0% | |
| TAAACCAGTTCTCTTAGTCT+TGG | - | chr1.1:66518073-66518092 | MS.gene68086:intron | 35.0% | |
| TACTTACAACCTCAGTAGAA+TGG | - | chr1.1:66518133-66518152 | MS.gene68086:intron | 35.0% | |
| TAGAAAGTCTGCTTCAGTAA+TGG | - | chr1.1:66516903-66516922 | MS.gene68086:intron | 35.0% | |
| TAGCTTATGATACAGCCTAT+AGG | + | chr1.1:66514543-66514562 | None:intergenic | 35.0% | |
| TAGTCTAATTATTGCAGGCA+CGG | + | chr1.1:66516292-66516311 | None:intergenic | 35.0% | |
| TATGTTATAAGCTTGCGGTT+TGG | - | chr1.1:66515706-66515725 | MS.gene68086:intron | 35.0% | |
| TCGAAAACAATATGGATGGT+TGG | + | chr1.1:66518641-66518660 | None:intergenic | 35.0% | |
| TGAAAGGTAAATATCCACAC+TGG | - | chr1.1:66517936-66517955 | MS.gene68086:intron | 35.0% | |
| TGAAATAAGTCGATCCAAAC+AGG | - | chr1.1:66514769-66514788 | MS.gene68086:CDS | 35.0% | |
| TGCCTGCAATAATTAGACTA+AGG | - | chr1.1:66516292-66516311 | MS.gene68086:intron | 35.0% | |
| TGTACCTAAAATCCATATCC+CGG | + | chr1.1:66516155-66516174 | None:intergenic | 35.0% | |
| TGTATTGCCAAAACTGTGAA+GGG | - | chr1.1:66517040-66517059 | MS.gene68086:CDS | 35.0% | |
| TTGGGCTGTTCAATTTGATA+TGG | - | chr1.1:66517456-66517475 | MS.gene68086:intron | 35.0% | |
| TTGTATTGCCAAAACTGTGA+AGG | - | chr1.1:66517039-66517058 | MS.gene68086:CDS | 35.0% | |
| TTTATGTGCTCTTTGAGCAA+TGG | - | chr1.1:66515085-66515104 | MS.gene68086:intron | 35.0% | |
| ! | AGAACTAAGGCTTCTCTTTT+GGG | - | chr1.1:66517438-66517457 | MS.gene68086:intron | 35.0% |
| ! | AGCTTCTTTTCTAATAGCCA+TGG | - | chr1.1:66515120-66515139 | MS.gene68086:intron | 35.0% |
| ! | ATATTTTGCCTCGAGTTCTA+TGG | - | chr1.1:66515774-66515793 | MS.gene68086:intron | 35.0% |
| ! | ATGTGGTTAGTTACGTTTCA+TGG | + | chr1.1:66518608-66518627 | None:intergenic | 35.0% |
| ! | ATTTTATCACGTGGAGATGA+CGG | + | chr1.1:66518458-66518477 | None:intergenic | 35.0% |
| ! | CAATTTTGTGTTAGAAGCTG+AGG | - | chr1.1:66515018-66515037 | MS.gene68086:CDS | 35.0% |
| ! | CATTCATGAACACACTTTTG+GGG | - | chr1.1:66517981-66518000 | MS.gene68086:intron | 35.0% |
| ! | CTATAAGCTGTAAGGTATTC+TGG | - | chr1.1:66514657-66514676 | MS.gene68086:intron | 35.0% |
| ! | GCTTCTTTTCTAATAGCCAT+GGG | - | chr1.1:66515121-66515140 | MS.gene68086:intron | 35.0% |
| ! | TAACCACACCATGATTTTTC+AGG | + | chr1.1:66518529-66518548 | None:intergenic | 35.0% |
| ! | TGGTTGGTGCAATTTAAATG+TGG | + | chr1.1:66518625-66518644 | None:intergenic | 35.0% |
| ! | TGTTCTTATTTCCTTGAGCT+AGG | - | chr1.1:66515350-66515369 | MS.gene68086:intron | 35.0% |
| ! | TGTTTGGATCGACTTATTTC+AGG | + | chr1.1:66514770-66514789 | None:intergenic | 35.0% |
| !! | ACAACTAGGTTGAGATTTTC+GGG | + | chr1.1:66514039-66514058 | None:intergenic | 35.0% |
| !! | CTCATCATTGGTTTAAACCT+TGG | + | chr1.1:66518875-66518894 | None:intergenic | 35.0% |
| !! | GTTCTGAGATATGACAAACA+TGG | + | chr1.1:66517423-66517442 | None:intergenic | 35.0% |
| !! | TAATCAAAAAGGTACCAGTG+TGG | + | chr1.1:66517953-66517972 | None:intergenic | 35.0% |
| !!! | CAGATATACTTGGTGCTTTT+AGG | - | chr1.1:66518755-66518774 | MS.gene68086:intron | 35.0% |
| !!! | TTATGTCGATTTTCCAAGGA+TGG | - | chr1.1:66516663-66516682 | MS.gene68086:intron | 35.0% |
| AAAATCAACCAGCTAGACCA+AGG | - | chr1.1:66518855-66518874 | MS.gene68086:CDS | 40.0% | |
| AAACATGAAACTGTTGCCCA+AGG | - | chr1.1:66515856-66515875 | MS.gene68086:intron | 40.0% | |
| AAGTCATTTGGATAGCAAGG+TGG | - | chr1.1:66517009-66517028 | MS.gene68086:CDS | 40.0% | |
| ACACCTGAAAAATCATGGTG+TGG | - | chr1.1:66518523-66518542 | MS.gene68086:intron | 40.0% | |
| ACTGTCCATTGAACGTGATT+AGG | - | chr1.1:66518411-66518430 | MS.gene68086:intron | 40.0% | |
| AGAAACGGTTATAGGGTCAA+AGG | + | chr1.1:66514115-66514134 | None:intergenic | 40.0% | |
| AGAATCTGGAAGGTTGAAGA+CGG | - | chr1.1:66516474-66516493 | MS.gene68086:intron | 40.0% | |
| AGCGGATGATTAATGATTGG+TGG | - | chr1.1:66518558-66518577 | MS.gene68086:intron | 40.0% | |
| AGGGGAAGTAGACAAAGAAA+CGG | + | chr1.1:66514130-66514149 | None:intergenic | 40.0% | |
| ATAAGTCTCTTACAGCGGTT+TGG | - | chr1.1:66516839-66516858 | MS.gene68086:intron | 40.0% | |
| ATAGCCAAGACTAAGAGAAC+TGG | + | chr1.1:66518080-66518099 | None:intergenic | 40.0% | |
| ATTTGGTACAACTGAGCATG+CGG | + | chr1.1:66515313-66515332 | None:intergenic | 40.0% | |
| CAATGTCATCAAGGTTTCAC+AGG | + | chr1.1:66516370-66516389 | None:intergenic | 40.0% | |
| CACATAAAATCATCACCGCT+AGG | + | chr1.1:66515073-66515092 | None:intergenic | 40.0% | |
| CTACTACTTTAAGTAACGGC+AGG | - | chr1.1:66515234-66515253 | MS.gene68086:intron | 40.0% | |
| CTAGCTTCAACTTCTACTGA+TGG | - | chr1.1:66516444-66516463 | MS.gene68086:CDS | 40.0% | |
| CTTACAACCTCAGTAGAATG+GGG | - | chr1.1:66518135-66518154 | MS.gene68086:intron | 40.0% | |
| CTTCTGTCTTTAACACGTGT+AGG | - | chr1.1:66516056-66516075 | MS.gene68086:CDS | 40.0% | |
| GAGATATGACAAACATGGCA+TGG | + | chr1.1:66517418-66517437 | None:intergenic | 40.0% | |
| GAGATTATTAGGAGAGCCTA+TGG | + | chr1.1:66514496-66514515 | None:intergenic | 40.0% | |
| GCATATGCATCACTCTACAT+AGG | + | chr1.1:66514796-66514815 | None:intergenic | 40.0% | |
| GGATCATGTAATTGGAAGTG+TGG | - | chr1.1:66514948-66514967 | MS.gene68086:intron | 40.0% | |
| GGCTGTATCATAAGCTATTC+TGG | - | chr1.1:66514546-66514565 | MS.gene68086:intron | 40.0% | |
| GGTCAGTATCAATGTCATCA+AGG | + | chr1.1:66516379-66516398 | None:intergenic | 40.0% | |
| GGTTAATTACGCTCAGTGAA+TGG | - | chr1.1:66518355-66518374 | MS.gene68086:intron | 40.0% | |
| GTAGATGACTGATAAGCTAG+CGG | - | chr1.1:66515418-66515437 | MS.gene68086:intron | 40.0% | |
| TAAGTCTCTTACAGCGGTTT+GGG | - | chr1.1:66516840-66516859 | MS.gene68086:intron | 40.0% | |
| TATAGCAAGAGACTACACCT+CGG | - | chr1.1:66517880-66517899 | MS.gene68086:CDS | 40.0% | |
| TCAACATCAATTCGGATGGA+TGG | - | chr1.1:66518312-66518331 | MS.gene68086:intron | 40.0% | |
| TCAACCTAGTTGTTCTTGGA+AGG | - | chr1.1:66514046-66514065 | MS.gene68086:CDS | 40.0% | |
| TCCAAAATTATGCGCATGCT+AGG | + | chr1.1:66516108-66516127 | None:intergenic | 40.0% | |
| TGCAGATTGTTTGAGCTCTA+TGG | - | chr1.1:66515824-66515843 | MS.gene68086:intron | 40.0% | |
| TGGATTTCTGTCCTAGTGAA+AGG | - | chr1.1:66517920-66517939 | MS.gene68086:intron | 40.0% | |
| TGTCTTTAACACGTGTAGGA+TGG | - | chr1.1:66516060-66516079 | MS.gene68086:CDS | 40.0% | |
| TGTTTGTGAAACTTGCAGAG+TGG | - | chr1.1:66518732-66518751 | MS.gene68086:intron | 40.0% | |
| TTCCACCAACAATCTTGTTC+AGG | + | chr1.1:66514873-66514892 | None:intergenic | 40.0% | |
| TTCCTGAACAAGATTGTTGG+TGG | - | chr1.1:66514868-66514887 | MS.gene68086:intron | 40.0% | |
| TTCTTTGTCTACTTCCCCTT+TGG | - | chr1.1:66514131-66514150 | MS.gene68086:CDS | 40.0% | |
| TTTGTGTTAGAAGCTGAGGA+AGG | - | chr1.1:66515022-66515041 | MS.gene68086:CDS | 40.0% | |
| ! | AAAAGCACACAAATCTGTCC+GGG | - | chr1.1:66516134-66516153 | MS.gene68086:intron | 40.0% |
| ! | CAAAAGCACACAAATCTGTC+CGG | - | chr1.1:66516133-66516152 | MS.gene68086:intron | 40.0% |
| ! | CAGAACTAAGGCTTCTCTTT+TGG | - | chr1.1:66517437-66517456 | MS.gene68086:intron | 40.0% |
| ! | GAGAAAATCTGAAGCAAAGC+AGG | + | chr1.1:66514093-66514112 | None:intergenic | 40.0% |
| ! | GGTGTAGTCTCTTGCTATAA+TGG | + | chr1.1:66517879-66517898 | None:intergenic | 40.0% |
| ! | GGTTAGTTACGTTTCATGGA+TGG | + | chr1.1:66518604-66518623 | None:intergenic | 40.0% |
| ! | TTCTTCACCCTTCACAGTTT+TGG | + | chr1.1:66517050-66517069 | None:intergenic | 40.0% |
| !! | AAATGGTTTGGTTCCATCCT+TGG | + | chr1.1:66516679-66516698 | None:intergenic | 40.0% |
| !! | GATCTAAATTTGCTGCTGGT+GGG | - | chr1.1:66515936-66515955 | MS.gene68086:intron | 40.0% |
| !! | GATGGATCTAAATTTGCTGC+TGG | - | chr1.1:66515932-66515951 | MS.gene68086:intron | 40.0% |
| !!! | GCTGGTTGATTTTTTCCCAT+TGG | + | chr1.1:66518848-66518867 | None:intergenic | 40.0% |
| AAGGAACTAACCCCTCTACA+GGG | - | chr1.1:66515875-66515894 | MS.gene68086:intron | 45.0% | |
| AATGATGCTGGATCACCTCA+GGG | - | chr1.1:66513982-66514001 | MS.gene68086:CDS | 45.0% | |
| ACACAAATCTGTCCGGGATA+TGG | - | chr1.1:66516140-66516159 | MS.gene68086:intron | 45.0% | |
| AGAGCAAGGTTTCAATCCCA+TGG | + | chr1.1:66515140-66515159 | None:intergenic | 45.0% | |
| AGGACAAGAATTTCCACGCT+TGG | + | chr1.1:66514073-66514092 | None:intergenic | 45.0% | |
| AGGGGATAAGTCTCTTACAG+CGG | - | chr1.1:66516834-66516853 | MS.gene68086:intron | 45.0% | |
| ATGTTGCGATAGTTGTACCG+AGG | + | chr1.1:66517900-66517919 | None:intergenic | 45.0% | |
| CACTCTACATAGGACCTGTT+TGG | + | chr1.1:66514786-66514805 | None:intergenic | 45.0% | |
| CGGTACAACTATCGCAACAT+TGG | - | chr1.1:66517900-66517919 | MS.gene68086:intron | 45.0% | |
| CTATTTGGCGCCGTTCAAAA+AGG | - | chr1.1:66516699-66516718 | MS.gene68086:intron | 45.0% | |
| GACACCTCAGAATTATGGAG+TGG | - | chr1.1:66516082-66516101 | MS.gene68086:intron | 45.0% | |
| GATTGAGGGTCTCTCATCAT+TGG | + | chr1.1:66518887-66518906 | None:intergenic | 45.0% | |
| GGAACAAAATAGGGCACAAG+AGG | - | chr1.1:66516875-66516894 | MS.gene68086:intron | 45.0% | |
| GGACAAGAATTTCCACGCTT+GGG | + | chr1.1:66514072-66514091 | None:intergenic | 45.0% | |
| GGATGGACACCTCAGAATTA+TGG | - | chr1.1:66516077-66516096 | MS.gene68086:intron | 45.0% | |
| GGCGCCAAATAGAAATGGTT+TGG | + | chr1.1:66516691-66516710 | None:intergenic | 45.0% | |
| GGTTTAAACCTTGGTCTAGC+TGG | + | chr1.1:66518866-66518885 | None:intergenic | 45.0% | |
| TAGGCCACTCCATAATTCTG+AGG | + | chr1.1:66516089-66516108 | None:intergenic | 45.0% | |
| TATGGATGTGTGCGAGCATA+TGG | + | chr1.1:66518214-66518233 | None:intergenic | 45.0% | |
| TCATACACTCTCCTAGCTCA+AGG | + | chr1.1:66515364-66515383 | None:intergenic | 45.0% | |
| TCGTGCCTAATCACGTTCAA+TGG | + | chr1.1:66518419-66518438 | None:intergenic | 45.0% | |
| TGAACGGCGCCAAATAGAAA+TGG | + | chr1.1:66516696-66516715 | None:intergenic | 45.0% | |
| TGCAGAGTGGCAGATATACT+TGG | - | chr1.1:66518745-66518764 | MS.gene68086:intron | 45.0% | |
| TTACTTGCGGGTCATGGATT+CGG | - | chr1.1:66514010-66514029 | MS.gene68086:CDS | 45.0% | |
| ! | ACTGATAAGCTAGCGGATAG+TGG | - | chr1.1:66515425-66515444 | MS.gene68086:intron | 45.0% |
| ! | CGAGAACTCTGATTCGTTCT+GGG | - | chr1.1:66518817-66518836 | MS.gene68086:CDS | 45.0% |
| ! | CGGACAGATTTGTGTGCTTT+TGG | + | chr1.1:66516135-66516154 | None:intergenic | 45.0% |
| ! | CGGTTTGGGATATGAGTTCA+TGG | - | chr1.1:66516854-66516873 | MS.gene68086:intron | 45.0% |
| ! | CTGTCCGGGATATGGATTTT+AGG | - | chr1.1:66516148-66516167 | MS.gene68086:intron | 45.0% |
| ! | GAGAACTCTGATTCGTTCTG+GGG | - | chr1.1:66518818-66518837 | MS.gene68086:CDS | 45.0% |
| ! | GCCTAGCATGCGCATAATTT+TGG | - | chr1.1:66516104-66516123 | MS.gene68086:intron | 45.0% |
| ! | TCGAGAACTCTGATTCGTTC+TGG | - | chr1.1:66518816-66518835 | MS.gene68086:CDS | 45.0% |
| !! | GGATCTAAATTTGCTGCTGG+TGG | - | chr1.1:66515935-66515954 | MS.gene68086:intron | 45.0% |
| !! | TAAATTTGCTGCTGGTGGGT+CGG | - | chr1.1:66515940-66515959 | MS.gene68086:intron | 45.0% |
| !! | TCGTTCTGGGGATTTCCAAT+GGG | - | chr1.1:66518830-66518849 | MS.gene68086:CDS | 45.0% |
| !! | TGTAGAGGGGTTAGTTCCTT+GGG | + | chr1.1:66515875-66515894 | None:intergenic | 45.0% |
| !! | TTCGTTCTGGGGATTTCCAA+TGG | - | chr1.1:66518829-66518848 | MS.gene68086:CDS | 45.0% |
| !!! | AAATATCATATTTAATTTAA+TGG | - | chr1.1:66517550-66517569 | MS.gene68086:intron | 5.0% |
| !!! | AATATCATATTTAATTTAAT+GGG | - | chr1.1:66517551-66517570 | MS.gene68086:intron | 5.0% |
| AGAAGCTGAGGAAGGTGATC+CGG | - | chr1.1:66515030-66515049 | MS.gene68086:CDS | 50.0% | |
| ATCCATGACCCGCAAGTAAC+CGG | + | chr1.1:66514009-66514028 | None:intergenic | 50.0% | |
| CAAGGAACTAACCCCTCTAC+AGG | - | chr1.1:66515874-66515893 | MS.gene68086:intron | 50.0% | |
| CAATGCTCCCCATTCTACTG+AGG | + | chr1.1:66518145-66518164 | None:intergenic | 50.0% | |
| CTAACCCCTCTACAGGGTAT+TGG | - | chr1.1:66515881-66515900 | MS.gene68086:intron | 50.0% | |
| CTGATGGTTCAGCGAGAATC+TGG | - | chr1.1:66516460-66516479 | MS.gene68086:CDS | 50.0% | |
| GAATGATGCTGGATCACCTC+AGG | - | chr1.1:66513981-66514000 | MS.gene68086:CDS | 50.0% | |
| GGAACCAATACCCTGTAGAG+GGG | + | chr1.1:66515888-66515907 | None:intergenic | 50.0% | |
| GGGAACCAATACCCTGTAGA+GGG | + | chr1.1:66515889-66515908 | None:intergenic | 50.0% | |
| GTATTTCCCGTCGTGGCTAA+CGG | + | chr1.1:66516929-66516948 | None:intergenic | 50.0% | |
| TGGGAACCAATACCCTGTAG+AGG | + | chr1.1:66515890-66515909 | None:intergenic | 50.0% | |
| TGGGCCTTCCAAGAACAACT+AGG | + | chr1.1:66514053-66514072 | None:intergenic | 50.0% | |
| TGGTTCAGCGAGAATCTGGA+AGG | - | chr1.1:66516464-66516483 | MS.gene68086:CDS | 50.0% | |
| ! | CTCAGTAGAATGGGGAGCAT+TGG | - | chr1.1:66518143-66518162 | MS.gene68086:intron | 50.0% |
| !! | CTGTAGAGGGGTTAGTTCCT+TGG | + | chr1.1:66515876-66515895 | None:intergenic | 50.0% |
| !! | GAGAAAGGTATTTCCCGTCG+TGG | + | chr1.1:66516936-66516955 | None:intergenic | 50.0% |
| GACCACTCTGTCTCGCAACT+CGG | - | chr1.1:66516506-66516525 | MS.gene68086:intron | 55.0% | |
| GCTATTGCTGTGCACCCTAG+CGG | - | chr1.1:66515055-66515074 | MS.gene68086:CDS | 55.0% | |
| GGGTGCACAGCAATAGCAAC+CGG | + | chr1.1:66515052-66515071 | None:intergenic | 55.0% | |
| GTAATGGCCGTTAGCCACGA+CGG | - | chr1.1:66516919-66516938 | MS.gene68086:intron | 55.0% | |
| TAATGGCCGTTAGCCACGAC+GGG | - | chr1.1:66516920-66516939 | MS.gene68086:intron | 55.0% | |
| TACCGAGTTGCGAGACAGAG+TGG | + | chr1.1:66516511-66516530 | None:intergenic | 55.0% | |
| TTGCGAGACAGAGTGGTCAC+AGG | + | chr1.1:66516504-66516523 | None:intergenic | 55.0% | |
| CCTCAGGGTCCGGTTACTTG+CGG | - | chr1.1:66513997-66514016 | MS.gene68086:CDS | 60.0% | |
| CTCAGGGTCCGGTTACTTGC+GGG | - | chr1.1:66513998-66514017 | MS.gene68086:CDS | 60.0% | |
| GTCCGGTTACTTGCGGGTCA+TGG | - | chr1.1:66514004-66514023 | MS.gene68086:CDS | 60.0% | |
| GTTCTTGGAAGGCCCAAGCG+TGG | - | chr1.1:66514057-66514076 | MS.gene68086:CDS | 60.0% | |
| TGCTGGATCACCTCAGGGTC+CGG | - | chr1.1:66513987-66514006 | MS.gene68086:CDS | 60.0% | |
| CCGCAAGTAACCGGACCCTG+AGG | + | chr1.1:66514000-66514019 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66513976 | 66518940 | 66513976 | ID=MS.gene68086 |
| chr1.1 | mRNA | 66513976 | 66518940 | 66513976 | ID=MS.gene68086.t1;Parent=MS.gene68086 |
| chr1.1 | exon | 66518764 | 66518940 | 66518764 | ID=MS.gene68086.t1.exon1;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66518764 | 66518940 | 66518764 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66517800 | 66517900 | 66517800 | ID=MS.gene68086.t1.exon2;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66517800 | 66517900 | 66517800 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66516955 | 66517087 | 66516955 | ID=MS.gene68086.t1.exon3;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66516955 | 66517087 | 66516955 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66516747 | 66516838 | 66516747 | ID=MS.gene68086.t1.exon4;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66516747 | 66516838 | 66516747 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66516389 | 66516488 | 66516389 | ID=MS.gene68086.t1.exon5;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66516389 | 66516488 | 66516389 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66516196 | 66516268 | 66516196 | ID=MS.gene68086.t1.exon6;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66516196 | 66516268 | 66516196 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66515960 | 66516080 | 66515960 | ID=MS.gene68086.t1.exon7;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66515960 | 66516080 | 66515960 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66514975 | 66515094 | 66514975 | ID=MS.gene68086.t1.exon8;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66514975 | 66515094 | 66514975 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66514718 | 66514788 | 66514718 | ID=MS.gene68086.t1.exon9;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66514718 | 66514788 | 66514718 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| chr1.1 | exon | 66513976 | 66514166 | 66513976 | ID=MS.gene68086.t1.exon10;Parent=MS.gene68086.t1 |
| chr1.1 | CDS | 66513976 | 66514166 | 66513976 | ID=cds.MS.gene68086.t1;Parent=MS.gene68086.t1 |
| Gene Sequence |
| Protein sequence |
