Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73788.t1 | XP_003602061.1 | 96.3 | 694 | 26 | 0 | 1 | 694 | 1 | 694 | 0.00E+00 | 1399.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73788.t1 | Q8GX69 | 62.0 | 693 | 252 | 7 | 10 | 692 | 6 | 697 | 6.3e-264 | 911.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73788.t1 | G7J4Z9 | 96.3 | 694 | 26 | 0 | 1 | 694 | 1 | 694 | 0.0e+00 | 1399.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049265 | MS.gene73788 | 0.822295 | 2.56E-53 | -1.69E-46 |
MS.gene049710 | MS.gene73788 | 0.80803 | 3.78E-50 | -1.69E-46 |
MS.gene050809 | MS.gene73788 | 0.808954 | 2.40E-50 | -1.69E-46 |
MS.gene051044 | MS.gene73788 | 0.806353 | 8.57E-50 | -1.69E-46 |
MS.gene05104 | MS.gene73788 | 0.824016 | 1.01E-53 | -1.69E-46 |
MS.gene051138 | MS.gene73788 | 0.834887 | 2.31E-56 | -1.69E-46 |
MS.gene051364 | MS.gene73788 | 0.80415 | 2.48E-49 | -1.69E-46 |
MS.gene051366 | MS.gene73788 | 0.805579 | 1.25E-49 | -1.69E-46 |
MS.gene051517 | MS.gene73788 | 0.801288 | 9.66E-49 | -1.69E-46 |
MS.gene051973 | MS.gene73788 | 0.804604 | 1.99E-49 | -1.69E-46 |
MS.gene052211 | MS.gene73788 | 0.800101 | 1.69E-48 | -1.69E-46 |
MS.gene052606 | MS.gene73788 | 0.837092 | 6.37E-57 | -1.69E-46 |
MS.gene053887 | MS.gene73788 | 0.812377 | 4.37E-51 | -1.69E-46 |
MS.gene054706 | MS.gene73788 | 0.806432 | 8.25E-50 | -1.69E-46 |
MS.gene055124 | MS.gene73788 | 0.806186 | 9.30E-50 | -1.69E-46 |
MS.gene055154 | MS.gene73788 | 0.803823 | 2.90E-49 | -1.69E-46 |
MS.gene056224 | MS.gene73788 | 0.820448 | 6.82E-53 | -1.69E-46 |
MS.gene056590 | MS.gene73788 | 0.829694 | 4.46E-55 | -1.69E-46 |
MS.gene056591 | MS.gene73788 | 0.828853 | 7.14E-55 | -1.69E-46 |
MS.gene056748 | MS.gene73788 | 0.84932 | 3.49E-60 | -1.69E-46 |
MS.gene056856 | MS.gene73788 | 0.853475 | 2.33E-61 | -1.69E-46 |
MS.gene056988 | MS.gene73788 | 0.800682 | 1.28E-48 | -1.69E-46 |
MS.gene057261 | MS.gene73788 | 0.819389 | 1.19E-52 | -1.69E-46 |
MS.gene057544 | MS.gene73788 | 0.82601 | 3.43E-54 | -1.69E-46 |
MS.gene057548 | MS.gene73788 | 0.811126 | 8.18E-51 | -1.69E-46 |
MS.gene057549 | MS.gene73788 | 0.812245 | 4.67E-51 | -1.69E-46 |
MS.gene057550 | MS.gene73788 | 0.804141 | 2.49E-49 | -1.69E-46 |
MS.gene057768 | MS.gene73788 | 0.821826 | 3.28E-53 | -1.69E-46 |
MS.gene058093 | MS.gene73788 | 0.825643 | 4.19E-54 | -1.69E-46 |
MS.gene058099 | MS.gene73788 | 0.844286 | 8.31E-59 | -1.69E-46 |
MS.gene058109 | MS.gene73788 | 0.813656 | 2.29E-51 | -1.69E-46 |
MS.gene058171 | MS.gene73788 | 0.803806 | 2.92E-49 | -1.69E-46 |
MS.gene058175 | MS.gene73788 | 0.80362 | 3.20E-49 | -1.69E-46 |
MS.gene058334 | MS.gene73788 | 0.81146 | 6.92E-51 | -1.69E-46 |
MS.gene058452 | MS.gene73788 | 0.818284 | 2.12E-52 | -1.69E-46 |
MS.gene058603 | MS.gene73788 | 0.837345 | 5.49E-57 | -1.69E-46 |
MS.gene059045 | MS.gene73788 | 0.826504 | 2.62E-54 | -1.69E-46 |
MS.gene059315 | MS.gene73788 | 0.805736 | 1.16E-49 | -1.69E-46 |
MS.gene060405 | MS.gene73788 | 0.801382 | 9.24E-49 | -1.69E-46 |
MS.gene061044 | MS.gene73788 | 0.807216 | 5.63E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73788.t1 | MTR_3g088520 | 96.254 | 694 | 26 | 0 | 1 | 694 | 1 | 694 | 0.0 | 1404 |
MS.gene73788.t1 | MTR_3g088520 | 96.088 | 639 | 25 | 0 | 56 | 694 | 1 | 639 | 0.0 | 1286 |
MS.gene73788.t1 | MTR_3g096910 | 60.795 | 704 | 264 | 5 | 3 | 694 | 2 | 705 | 0.0 | 885 |
MS.gene73788.t1 | MTR_3g117840 | 48.860 | 702 | 340 | 6 | 7 | 690 | 9 | 709 | 0.0 | 704 |
MS.gene73788.t1 | MTR_2g039120 | 51.385 | 722 | 303 | 15 | 6 | 687 | 9 | 722 | 0.0 | 692 |
MS.gene73788.t1 | MTR_8g016230 | 50.347 | 721 | 310 | 11 | 8 | 687 | 7 | 720 | 0.0 | 692 |
MS.gene73788.t1 | MTR_4g073290 | 48.699 | 692 | 340 | 5 | 13 | 690 | 15 | 705 | 0.0 | 691 |
MS.gene73788.t1 | MTR_1g018200 | 51.631 | 705 | 293 | 16 | 24 | 687 | 29 | 726 | 0.0 | 683 |
MS.gene73788.t1 | MTR_2g100110 | 51.336 | 711 | 297 | 12 | 18 | 687 | 21 | 723 | 0.0 | 682 |
MS.gene73788.t1 | MTR_3g096910 | 58.018 | 555 | 223 | 4 | 150 | 694 | 1 | 555 | 0.0 | 671 |
MS.gene73788.t1 | MTR_1g023120 | 49.499 | 699 | 312 | 11 | 26 | 687 | 29 | 723 | 0.0 | 669 |
MS.gene73788.t1 | MTR_3g112370 | 50.426 | 704 | 298 | 13 | 26 | 687 | 28 | 722 | 0.0 | 667 |
MS.gene73788.t1 | MTR_5g021190 | 49.725 | 726 | 308 | 15 | 6 | 687 | 8 | 720 | 0.0 | 666 |
MS.gene73788.t1 | MTR_2g094060 | 48.954 | 717 | 321 | 11 | 12 | 689 | 8 | 718 | 0.0 | 664 |
MS.gene73788.t1 | MTR_2g094060 | 48.954 | 717 | 321 | 11 | 12 | 689 | 8 | 718 | 0.0 | 664 |
MS.gene73788.t1 | MTR_2g094020 | 48.963 | 723 | 316 | 12 | 12 | 689 | 8 | 722 | 0.0 | 662 |
MS.gene73788.t1 | MTR_4g059680 | 47.928 | 724 | 328 | 11 | 11 | 694 | 15 | 729 | 0.0 | 655 |
MS.gene73788.t1 | MTR_2g039120 | 52.648 | 661 | 285 | 14 | 6 | 646 | 9 | 661 | 0.0 | 654 |
MS.gene73788.t1 | MTR_2g094060 | 50.307 | 652 | 301 | 10 | 12 | 646 | 8 | 653 | 0.0 | 632 |
MS.gene73788.t1 | MTR_3g096900 | 47.253 | 728 | 335 | 12 | 7 | 687 | 5 | 730 | 0.0 | 626 |
MS.gene73788.t1 | MTR_1g023120 | 48.806 | 670 | 300 | 12 | 56 | 687 | 1 | 665 | 0.0 | 621 |
MS.gene73788.t1 | MTR_2g039120 | 51.935 | 620 | 270 | 14 | 10 | 609 | 13 | 624 | 0.0 | 599 |
MS.gene73788.t1 | MTR_2g042610 | 43.912 | 731 | 363 | 13 | 7 | 692 | 8 | 736 | 0.0 | 593 |
MS.gene73788.t1 | MTR_3g096900 | 46.848 | 698 | 322 | 12 | 7 | 657 | 5 | 700 | 0.0 | 589 |
MS.gene73788.t1 | MTR_8g085210 | 44.065 | 733 | 333 | 14 | 25 | 687 | 49 | 774 | 0.0 | 589 |
MS.gene73788.t1 | MTR_2g100110 | 52.431 | 576 | 247 | 10 | 18 | 574 | 21 | 588 | 0.0 | 584 |
MS.gene73788.t1 | MTR_5g024080 | 44.837 | 707 | 345 | 14 | 26 | 690 | 10 | 713 | 0.0 | 575 |
MS.gene73788.t1 | MTR_5g025830 | 45.211 | 710 | 341 | 16 | 26 | 693 | 28 | 731 | 0.0 | 568 |
MS.gene73788.t1 | MTR_2g039120 | 52.144 | 583 | 253 | 13 | 10 | 574 | 13 | 587 | 0.0 | 564 |
MS.gene73788.t1 | MTR_3g005570 | 43.103 | 696 | 349 | 12 | 11 | 665 | 15 | 704 | 0.0 | 546 |
MS.gene73788.t1 | MTR_3g096900 | 47.756 | 624 | 300 | 10 | 7 | 606 | 5 | 626 | 0.0 | 540 |
MS.gene73788.t1 | MTR_5g022590 | 43.987 | 316 | 141 | 5 | 43 | 358 | 9 | 288 | 2.04e-88 | 283 |
MS.gene73788.t1 | MTR_4g126330 | 33.424 | 368 | 142 | 13 | 286 | 642 | 134 | 409 | 1.33e-37 | 146 |
MS.gene73788.t1 | MTR_4g126330 | 61.957 | 92 | 35 | 0 | 81 | 172 | 25 | 116 | 1.21e-28 | 120 |
MS.gene73788.t1 | MTR_3g005610 | 32.937 | 252 | 150 | 5 | 453 | 690 | 47 | 293 | 8.65e-34 | 132 |
MS.gene73788.t1 | MTR_2g059440 | 31.641 | 256 | 155 | 6 | 453 | 694 | 47 | 296 | 2.91e-30 | 121 |
MS.gene73788.t1 | MTR_2g059430 | 30.364 | 247 | 136 | 6 | 453 | 694 | 13 | 228 | 2.20e-25 | 105 |
MS.gene73788.t1 | MTR_2g100000 | 29.254 | 335 | 195 | 9 | 42 | 345 | 70 | 393 | 3.41e-23 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73788.t1 | AT1G77410 | 62.049 | 693 | 252 | 7 | 10 | 692 | 6 | 697 | 0.0 | 906 |
MS.gene73788.t1 | AT1G77410 | 61.605 | 698 | 252 | 8 | 10 | 692 | 6 | 702 | 0.0 | 900 |
MS.gene73788.t1 | AT5G63800 | 58.993 | 695 | 276 | 3 | 7 | 692 | 13 | 707 | 0.0 | 864 |
MS.gene73788.t1 | AT1G77410 | 61.847 | 574 | 211 | 6 | 126 | 692 | 19 | 591 | 0.0 | 747 |
MS.gene73788.t1 | AT1G77410 | 61.847 | 574 | 211 | 6 | 126 | 692 | 19 | 591 | 0.0 | 747 |
MS.gene73788.t1 | AT3G13750 | 51.801 | 722 | 294 | 12 | 7 | 687 | 21 | 729 | 0.0 | 701 |
MS.gene73788.t1 | AT4G26140 | 49.791 | 717 | 319 | 12 | 7 | 687 | 11 | 722 | 0.0 | 694 |
MS.gene73788.t1 | AT4G35010 | 50.000 | 668 | 317 | 7 | 26 | 678 | 41 | 706 | 0.0 | 687 |
MS.gene73788.t1 | AT3G52840 | 48.886 | 718 | 324 | 11 | 7 | 687 | 64 | 775 | 0.0 | 685 |
MS.gene73788.t1 | AT3G52840 | 48.886 | 718 | 324 | 11 | 7 | 687 | 10 | 721 | 0.0 | 684 |
MS.gene73788.t1 | AT2G16730 | 48.806 | 670 | 322 | 7 | 26 | 678 | 44 | 709 | 0.0 | 681 |
MS.gene73788.t1 | AT4G26140 | 48.113 | 742 | 319 | 13 | 7 | 687 | 11 | 747 | 0.0 | 680 |
MS.gene73788.t1 | AT5G56870 | 49.241 | 725 | 308 | 15 | 8 | 687 | 11 | 720 | 0.0 | 671 |
MS.gene73788.t1 | AT4G36360 | 49.101 | 723 | 315 | 14 | 7 | 687 | 17 | 728 | 0.0 | 671 |
MS.gene73788.t1 | AT4G36360 | 49.101 | 723 | 315 | 14 | 7 | 687 | 17 | 728 | 0.0 | 671 |
MS.gene73788.t1 | AT2G28470 | 49.017 | 712 | 312 | 13 | 23 | 689 | 29 | 734 | 0.0 | 659 |
MS.gene73788.t1 | AT2G28470 | 49.017 | 712 | 312 | 13 | 23 | 689 | 29 | 734 | 0.0 | 659 |
MS.gene73788.t1 | AT2G28470 | 49.017 | 712 | 312 | 13 | 23 | 689 | 23 | 728 | 0.0 | 659 |
MS.gene73788.t1 | AT2G28470 | 49.017 | 712 | 312 | 13 | 23 | 689 | 23 | 728 | 0.0 | 659 |
MS.gene73788.t1 | AT1G45130 | 48.675 | 717 | 316 | 13 | 7 | 681 | 14 | 720 | 0.0 | 659 |
MS.gene73788.t1 | AT4G26140 | 49.192 | 681 | 300 | 12 | 7 | 646 | 11 | 686 | 0.0 | 649 |
MS.gene73788.t1 | AT5G63810 | 45.706 | 722 | 348 | 10 | 8 | 687 | 14 | 733 | 0.0 | 637 |
MS.gene73788.t1 | AT2G28470 | 50.935 | 642 | 286 | 12 | 25 | 643 | 31 | 666 | 0.0 | 629 |
MS.gene73788.t1 | AT4G38590 | 47.913 | 647 | 313 | 10 | 56 | 683 | 1 | 642 | 0.0 | 629 |
MS.gene73788.t1 | AT4G38590 | 45.262 | 707 | 352 | 12 | 6 | 683 | 6 | 706 | 0.0 | 627 |
MS.gene73788.t1 | AT2G32810 | 45.286 | 753 | 339 | 15 | 5 | 690 | 12 | 758 | 0.0 | 622 |
MS.gene73788.t1 | AT2G32810 | 45.286 | 753 | 339 | 15 | 5 | 690 | 12 | 758 | 0.0 | 620 |
MS.gene73788.t1 | AT4G26140 | 50.971 | 618 | 282 | 11 | 7 | 608 | 11 | 623 | 0.0 | 611 |
MS.gene73788.t1 | AT4G26140 | 50.971 | 618 | 280 | 11 | 7 | 608 | 11 | 621 | 0.0 | 608 |
MS.gene73788.t1 | AT4G26140 | 50.971 | 618 | 280 | 11 | 7 | 608 | 11 | 621 | 0.0 | 608 |
MS.gene73788.t1 | AT5G20710 | 41.883 | 733 | 383 | 11 | 1 | 692 | 3 | 733 | 0.0 | 587 |
MS.gene73788.t1 | AT1G31740 | 44.789 | 710 | 336 | 17 | 7 | 690 | 6 | 685 | 0.0 | 577 |
MS.gene73788.t1 | AT4G26140 | 53.028 | 545 | 243 | 8 | 8 | 544 | 12 | 551 | 0.0 | 568 |
MS.gene73788.t1 | AT1G45130 | 47.096 | 637 | 287 | 12 | 87 | 681 | 13 | 641 | 0.0 | 555 |
MS.gene73788.t1 | AT4G26140 | 50.702 | 570 | 243 | 9 | 8 | 544 | 12 | 576 | 0.0 | 555 |
MS.gene73788.t1 | AT4G26140 | 50.702 | 570 | 243 | 9 | 8 | 544 | 12 | 576 | 0.0 | 555 |
MS.gene73788.t1 | AT5G20710 | 36.226 | 530 | 295 | 11 | 204 | 692 | 1 | 528 | 3.98e-111 | 349 |
MS.gene73788.t1 | AT2G04060 | 32.213 | 357 | 172 | 8 | 293 | 643 | 23 | 315 | 5.32e-43 | 162 |
MS.gene73788.t1 | AT2G04062 | 40.462 | 173 | 82 | 2 | 26 | 198 | 7 | 158 | 1.77e-38 | 140 |
MS.gene73788.t1 | AT1G72990 | 28.967 | 397 | 238 | 9 | 36 | 402 | 18 | 400 | 2.02e-32 | 134 |
MS.gene73788.t1 | AT1G72990 | 28.967 | 397 | 238 | 9 | 36 | 402 | 73 | 455 | 2.22e-32 | 134 |
MS.gene73788.t1 | AT1G72990 | 28.967 | 397 | 238 | 9 | 36 | 402 | 73 | 455 | 2.22e-32 | 134 |
MS.gene73788.t1 | AT1G72990 | 28.756 | 386 | 231 | 9 | 47 | 402 | 22 | 393 | 6.20e-29 | 123 |
Find 173 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAAGTATCGGCAAAATT+AGG | 0.136464 | 3.3:-73695862 | None:intergenic |
CACAGAATGTGCTGCCTTCT+TGG | 0.153848 | 3.3:+73695465 | MS.gene73788:CDS |
TTTCATCATGTTGACTATTT+TGG | 0.164006 | 3.3:-73694075 | None:intergenic |
GCAATGTGGGAGAAACTTTA+AGG | 0.207416 | 3.3:+73694574 | MS.gene73788:CDS |
ACTATATGTGGTACACTTTC+AGG | 0.210126 | 3.3:+73695935 | MS.gene73788:CDS |
AAGGGAATTGCTTGGGTTAA+TGG | 0.212295 | 3.3:+73697578 | MS.gene73788:CDS |
TCATACAAACTTACGTGTTT+TGG | 0.226139 | 3.3:+73693283 | MS.gene73788:CDS |
AGTTCAATTCAGCTGAAAAT+TGG | 0.226601 | 3.3:+73695818 | MS.gene73788:CDS |
TCCTTAAGATGTCCCCATTT+TGG | 0.231023 | 3.3:-73695160 | None:intergenic |
AGTGCTTAACCTTGGTTCTA+TGG | 0.238870 | 3.3:+73697553 | MS.gene73788:CDS |
GCCAAGGTATTGGACGATAT+TGG | 0.257316 | 3.3:+73697600 | MS.gene73788:CDS |
GACATCTAATCCTCCTTCTT+TGG | 0.263463 | 3.3:-73693262 | None:intergenic |
TTTGAAGTCCCACGGCCATT+TGG | 0.264333 | 3.3:-73694308 | None:intergenic |
GTTTGGTTAGACAACCAAAA+TGG | 0.279707 | 3.3:+73695146 | MS.gene73788:CDS |
TAATCCTCCTTCTTTGGCTT+TGG | 0.297718 | 3.3:-73693256 | None:intergenic |
TAAATGAAGGTTGGGTTGTT+AGG | 0.307229 | 3.3:+73697102 | MS.gene73788:intron |
TATGAACAAGGCAACATTAT+AGG | 0.308128 | 3.3:-73694827 | None:intergenic |
ATTAATAGTTTACAAGCTTT+TGG | 0.309185 | 3.3:+73694769 | MS.gene73788:intron |
ATTGAGAGTGAATGCACTTA+TGG | 0.315012 | 3.3:+73693733 | MS.gene73788:CDS |
TTGAAGTCCCACGGCCATTT+GGG | 0.331347 | 3.3:-73694307 | None:intergenic |
TCCCACTGTTGCACTAAGTA+TGG | 0.332189 | 3.3:-73696427 | None:intergenic |
CTAAGAACAGATTGTGCATT+AGG | 0.335456 | 3.3:-73696094 | None:intergenic |
TTGAAGTATCGGCAAAATTA+GGG | 0.337323 | 3.3:-73695861 | None:intergenic |
GAAGGCTTGTTAGGAGAGTT+TGG | 0.344500 | 3.3:-73694599 | None:intergenic |
TTGGGCAGCCCAACGAATAT+AGG | 0.344539 | 3.3:-73694289 | None:intergenic |
ACCAAAATGGGGACATCTTA+AGG | 0.354053 | 3.3:+73695159 | MS.gene73788:CDS |
CAAAGTAAGTTTCGAGAGAA+TGG | 0.355862 | 3.3:+73694261 | MS.gene73788:CDS |
TAATTACTCATGGGGATATC+AGG | 0.358295 | 3.3:+73696831 | MS.gene73788:CDS |
TGGGTTAATGGCCAAGGTAT+TGG | 0.361101 | 3.3:+73697590 | MS.gene73788:CDS |
AGTGATTCCTAAGGGGTTCC+CGG | 0.372281 | 3.3:-73698142 | None:intergenic |
TCACTTCTAAATACAATTCC+AGG | 0.376793 | 3.3:-73693917 | None:intergenic |
GTTATACTTGAAGAAGAAAC+CGG | 0.376857 | 3.3:+73698123 | MS.gene73788:CDS |
TAATTGTGGTTTCATTGCTC+TGG | 0.381958 | 3.3:-73695794 | None:intergenic |
GCTGTAGGGGTCTACCATTA+TGG | 0.382065 | 3.3:+73693882 | MS.gene73788:intron |
TAAACCACTCACATGGTATC+AGG | 0.384274 | 3.3:+73697194 | MS.gene73788:CDS |
CCAAGGTATTGGACGATATT+GGG | 0.385483 | 3.3:+73697601 | MS.gene73788:CDS |
AATATTTCGTATGAATTGCC+TGG | 0.387602 | 3.3:+73695526 | MS.gene73788:CDS |
ATGTAGATTGAGAATGAATA+TGG | 0.390011 | 3.3:+73694231 | MS.gene73788:intron |
TAGTGGAAGGTTTGATTTAG+TGG | 0.394049 | 3.3:+73693651 | MS.gene73788:CDS |
TGTTCACAACCTCTACTTGA+TGG | 0.396063 | 3.3:+73695205 | MS.gene73788:CDS |
CTTCTGCAGTATGAGTTTAG+TGG | 0.397314 | 3.3:+73693634 | MS.gene73788:intron |
TATTCGTTGGGCTGCCCAAA+TGG | 0.400359 | 3.3:+73694293 | MS.gene73788:CDS |
GTCCATAGTGAAGGCTTGTT+AGG | 0.404534 | 3.3:-73694608 | None:intergenic |
TTATATGTGACCCTTCGAAT+TGG | 0.404622 | 3.3:+73693703 | MS.gene73788:CDS |
AATTACTGAAATCTCTTCCT+TGG | 0.408801 | 3.3:-73696813 | None:intergenic |
TTTGGTTAGACAACCAAAAT+GGG | 0.416446 | 3.3:+73695147 | MS.gene73788:CDS |
CTTCACTATGGACAGAGAAT+TGG | 0.420589 | 3.3:+73694618 | MS.gene73788:CDS |
TGGGCAGCCCAACGAATATA+GGG | 0.423176 | 3.3:-73694288 | None:intergenic |
TTTACTCAAACCAGCAACTT+TGG | 0.427160 | 3.3:-73696782 | None:intergenic |
TTATGGTTACATGATGTTCC+TGG | 0.429910 | 3.3:+73693899 | MS.gene73788:CDS |
AAAATGTCAATCTGATAAAC+GGG | 0.436199 | 3.3:+73696391 | MS.gene73788:CDS |
TTTCTAGAGACCAAAGTTGC+TGG | 0.437416 | 3.3:+73696772 | MS.gene73788:CDS |
TAGTGCAACAGTGGGATTGC+CGG | 0.437529 | 3.3:+73696434 | MS.gene73788:CDS |
TTGAGAGTGAATGCACTTAT+GGG | 0.439807 | 3.3:+73693734 | MS.gene73788:CDS |
CTCCTAACAAGCCTTCACTA+TGG | 0.444788 | 3.3:+73694606 | MS.gene73788:CDS |
TTGGGCTGCCCAAATGGCCG+TGG | 0.445681 | 3.3:+73694299 | MS.gene73788:CDS |
GAGAGACTGACCACTGGATC+AGG | 0.446416 | 3.3:-73694369 | None:intergenic |
GAGGCTCCACTGGATGAATA+TGG | 0.446906 | 3.3:+73695042 | MS.gene73788:CDS |
AATTGGATTGTTACATCCCT+AGG | 0.447987 | 3.3:-73695499 | None:intergenic |
TAAACCTGGGATAGTATGAT+AGG | 0.451854 | 3.3:-73694128 | None:intergenic |
TGTTGTGAAGGAGTTCCATC+TGG | 0.453218 | 3.3:-73697638 | None:intergenic |
TATGGGAAAGGGAATTGCTT+GGG | 0.453738 | 3.3:+73697571 | MS.gene73788:CDS |
TGGGTTGCCCTATATTCGTT+GGG | 0.460338 | 3.3:+73694281 | MS.gene73788:CDS |
GGAACATCATGTAACCATAA+TGG | 0.461861 | 3.3:-73693896 | None:intergenic |
CGTTCTTTCCTAAAATCGAC+TGG | 0.470629 | 3.3:+73698090 | MS.gene73788:CDS |
TCTGAAGCTGATCTCAAGTA+TGG | 0.472062 | 3.3:-73694799 | None:intergenic |
AAAGTAAGTTTCGAGAGAAT+GGG | 0.472636 | 3.3:+73694262 | MS.gene73788:CDS |
ATGGGTTGCCCTATATTCGT+TGG | 0.474004 | 3.3:+73694280 | MS.gene73788:CDS |
GAAGAAACCGGGAACCCCTT+AGG | 0.474106 | 3.3:+73698135 | MS.gene73788:CDS |
TTAATTTCCAAAGCCAAAGA+AGG | 0.474275 | 3.3:+73693249 | MS.gene73788:CDS |
GTGCTTAACCTTGGTTCTAT+GGG | 0.476524 | 3.3:+73697554 | MS.gene73788:CDS |
GACTTCAAACCGGTGTGCCT+TGG | 0.476862 | 3.3:+73694322 | MS.gene73788:CDS |
GTGCATTCACTCTCAATGTA+TGG | 0.478471 | 3.3:-73693727 | None:intergenic |
AACCTTGGTTCTATGGGAAA+GGG | 0.481011 | 3.3:+73697560 | MS.gene73788:CDS |
TTGGCTTTGGAAATTAAGTC+AGG | 0.481878 | 3.3:-73693243 | None:intergenic |
CTTCTTCAAGTATAACAAGT+AGG | 0.483081 | 3.3:-73698116 | None:intergenic |
AGAACATCGTTGGTCATTAA+CGG | 0.485783 | 3.3:+73690430 | MS.gene73788:CDS |
CCCAATATCGTCCAATACCT+TGG | 0.486272 | 3.3:-73697601 | None:intergenic |
AAGGAGTTCCATCTGGTTTG+TGG | 0.487600 | 3.3:-73697631 | None:intergenic |
CAATGTGGGAGAAACTTTAA+GGG | 0.489483 | 3.3:+73694575 | MS.gene73788:CDS |
TAACCTTGGTTCTATGGGAA+AGG | 0.492916 | 3.3:+73697559 | MS.gene73788:CDS |
GAGATTTCAGTAATTACTCA+TGG | 0.494226 | 3.3:+73696821 | MS.gene73788:CDS |
AGTGGAAGGTTTGATTTAGT+GGG | 0.498332 | 3.3:+73693652 | MS.gene73788:CDS |
ATTAAAGAAATTCAAGCTCA+AGG | 0.500012 | 3.3:+73693679 | MS.gene73788:CDS |
AAGTGATAATGATCAATTCA+AGG | 0.504392 | 3.3:+73693934 | MS.gene73788:CDS |
GCTGCCTTCTTGGAAAATAG+TGG | 0.505645 | 3.3:+73695475 | MS.gene73788:CDS |
GCCTTGTTCATAGCAAAGAA+AGG | 0.509544 | 3.3:+73694838 | MS.gene73788:CDS |
CTATGGGAAAGGGAATTGCT+TGG | 0.510074 | 3.3:+73697570 | MS.gene73788:CDS |
TTATTATGATGAGGCTCCAC+TGG | 0.510643 | 3.3:+73695032 | MS.gene73788:CDS |
GAACCAAGGTTAAGCACTAC+AGG | 0.511347 | 3.3:-73697548 | None:intergenic |
AGTGAATTGAACCAGAGAAA+AGG | 0.515748 | 3.3:-73690465 | None:intergenic |
AGTTGCTGGTTTGAGTAAAG+TGG | 0.516443 | 3.3:+73696786 | MS.gene73788:CDS |
ATGGCCGTGGGACTTCAAAC+CGG | 0.524566 | 3.3:+73694312 | MS.gene73788:CDS |
GTGTCTAGAGTGATTCCTAA+GGG | 0.526469 | 3.3:-73698150 | None:intergenic |
CTATCCTCGTAGCACTCCTC+AGG | 0.528740 | 3.3:+73690486 | MS.gene73788:CDS |
AAGACTACATTCTTGCAGCC+TGG | 0.529766 | 3.3:-73695568 | None:intergenic |
CTACATTCTTGCAGCCTGGT+AGG | 0.536592 | 3.3:-73695564 | None:intergenic |
CTTGGAAAATAGTGGACCTA+GGG | 0.539564 | 3.3:+73695483 | MS.gene73788:CDS |
GTGTCTCTTTGCACCGTCCA+TGG | 0.539794 | 3.3:+73690388 | MS.gene73788:CDS |
TCACGAGCCTCAACAAGGCC+AGG | 0.541047 | 3.3:+73693311 | MS.gene73788:CDS |
CAATGTATGGTCCAATTCGA+AGG | 0.542390 | 3.3:-73693714 | None:intergenic |
AAGATACATCTGACTATATG+TGG | 0.549097 | 3.3:+73695923 | MS.gene73788:CDS |
AGATTTCAGTAATTACTCAT+GGG | 0.549878 | 3.3:+73696822 | MS.gene73788:CDS |
ATATTTCGTATGAATTGCCT+GGG | 0.552300 | 3.3:+73695527 | MS.gene73788:CDS |
AGGACCTATCATACTATCCC+AGG | 0.553587 | 3.3:+73694124 | MS.gene73788:CDS |
ACCACATTCGATGCACCAGC+TGG | 0.554238 | 3.3:+73697518 | MS.gene73788:CDS |
TGTGTCTAGAGTGATTCCTA+AGG | 0.556583 | 3.3:-73698151 | None:intergenic |
CAAGAAGGCAGCACATTCTG+TGG | 0.556669 | 3.3:-73695464 | None:intergenic |
AAGTTATGTCAATTATTACA+TGG | 0.562787 | 3.3:+73694861 | MS.gene73788:CDS |
ATTGCTTGGGTTAATGGCCA+AGG | 0.565803 | 3.3:+73697584 | MS.gene73788:CDS |
TCCTTTCTTTGCTATGAACA+AGG | 0.565995 | 3.3:-73694839 | None:intergenic |
AAGAATGTAGTCTTCAACAC+CGG | 0.567336 | 3.3:+73695577 | MS.gene73788:CDS |
GCTGAATTGAACTTTAATTG+TGG | 0.567491 | 3.3:-73695808 | None:intergenic |
TCTTGGAAAATAGTGGACCT+AGG | 0.570208 | 3.3:+73695482 | MS.gene73788:CDS |
CAACAATATGCAAGTTACAA+TGG | 0.571370 | 3.3:+73696365 | MS.gene73788:CDS |
GAAACATACCATTGTTGTGA+AGG | 0.573167 | 3.3:-73697650 | None:intergenic |
CTGTGAGCCTAAGCTGAAGG+TGG | 0.573454 | 3.3:-73695236 | None:intergenic |
TGGGCTGCCCAAATGGCCGT+GGG | 0.573977 | 3.3:+73694300 | MS.gene73788:CDS |
CATGCAATGGCATGCAATGT+GGG | 0.574956 | 3.3:+73694561 | MS.gene73788:CDS |
ACTCAAACCACCTTCAGCTT+AGG | 0.578526 | 3.3:+73695229 | MS.gene73788:CDS |
TATCAAAATTAGTTCCTCCA+TGG | 0.578938 | 3.3:-73694981 | None:intergenic |
ACGAATTTGATGCAGTACCA+TGG | 0.579385 | 3.3:+73694964 | MS.gene73788:intron |
TTGCAAATCTATTCAGTCAG+TGG | 0.580451 | 3.3:+73697132 | MS.gene73788:CDS |
CGTAGGTAACATTGCCACCA+TGG | 0.581586 | 3.3:-73690405 | None:intergenic |
GATCCTGTAGTGCTTAACCT+TGG | 0.586671 | 3.3:+73697545 | MS.gene73788:CDS |
TCCATACTTAGTGCAACAGT+GGG | 0.588438 | 3.3:+73696426 | MS.gene73788:CDS |
TGCAGTATGAGTTTAGTGGA+AGG | 0.589406 | 3.3:+73693638 | MS.gene73788:intron |
GGTAACATTGCCACCATGGA+CGG | 0.589509 | 3.3:-73690401 | None:intergenic |
ATTTCCAAAGCCAAAGAAGG+AGG | 0.589753 | 3.3:+73693252 | MS.gene73788:CDS |
CAATTCTCTGTCCATAGTGA+AGG | 0.589841 | 3.3:-73694617 | None:intergenic |
GTATCTTTCCACAAACCAGA+TGG | 0.590713 | 3.3:+73697623 | MS.gene73788:CDS |
AGGATACTGATTGATTTCCC+AGG | 0.591043 | 3.3:-73695544 | None:intergenic |
GAGGTTACCTGGCCTTGTTG+AGG | 0.591838 | 3.3:-73693318 | None:intergenic |
GTTTGAGTTCCATCAAGTAG+AGG | 0.592892 | 3.3:-73695214 | None:intergenic |
TACCTACGACAGAACATCGT+TGG | 0.596916 | 3.3:+73690420 | MS.gene73788:CDS |
TTGCTGTGAGCCTAAGCTGA+AGG | 0.597462 | 3.3:-73695239 | None:intergenic |
ATGCAGATCAACGCATGCAA+TGG | 0.599303 | 3.3:+73694548 | MS.gene73788:intron |
CTCCATACTTAGTGCAACAG+TGG | 0.602703 | 3.3:+73696425 | MS.gene73788:CDS |
GTGGATCAAGTAAAGTTCAG+TGG | 0.607801 | 3.3:+73697151 | MS.gene73788:CDS |
TTAACTGTAGGTTCTGCACA+TGG | 0.608812 | 3.3:+73696336 | MS.gene73788:intron |
GCCAGCTGGTGCATCGAATG+TGG | 0.611606 | 3.3:-73697519 | None:intergenic |
ACTACAGGATCATTGCCAGC+TGG | 0.612769 | 3.3:-73697533 | None:intergenic |
AATAACAGCTTATTATGATG+AGG | 0.614024 | 3.3:+73695023 | MS.gene73788:CDS |
TCTTGTTTACACATCATCCA+AGG | 0.616222 | 3.3:-73694339 | None:intergenic |
GATTTCAGTAATTACTCATG+GGG | 0.616447 | 3.3:+73696823 | MS.gene73788:CDS |
ACCATACCATATTCATCCAG+TGG | 0.618114 | 3.3:-73695048 | None:intergenic |
TTCCCTTTCCCATAGAACCA+AGG | 0.619209 | 3.3:-73697562 | None:intergenic |
GTTCTTAGTATATACAGTCA+AGG | 0.620590 | 3.3:+73696109 | MS.gene73788:CDS |
AAATCAATCAGTATCCTACC+AGG | 0.632250 | 3.3:+73695550 | MS.gene73788:CDS |
AGCTGTTATTATGAAAGCAG+AGG | 0.636343 | 3.3:-73695010 | None:intergenic |
AGTATCGGCAAAATTAGGGA+TGG | 0.638859 | 3.3:-73695857 | None:intergenic |
TTGAGTAAAGTGGAAGTCCA+AGG | 0.642100 | 3.3:+73696796 | MS.gene73788:CDS |
AAATCAAAATCATGGGAGAG+TGG | 0.642102 | 3.3:+73690332 | None:intergenic |
AATGTATGGTCCAATTCGAA+GGG | 0.643269 | 3.3:-73693713 | None:intergenic |
TGTAGTCTTCAACACCGGCA+AGG | 0.643630 | 3.3:+73695582 | MS.gene73788:CDS |
ATGGAACTCCTTCACAACAA+TGG | 0.646963 | 3.3:+73697642 | MS.gene73788:CDS |
GTTCTTTCCTAAAATCGACT+GGG | 0.647340 | 3.3:+73698091 | MS.gene73788:CDS |
CACACCGGTTTGAAGTCCCA+CGG | 0.651964 | 3.3:-73694316 | None:intergenic |
AGATGATGCTCCTGATCCAG+TGG | 0.653215 | 3.3:+73694359 | MS.gene73788:CDS |
AATCTTCACGAGCCTCAACA+AGG | 0.655545 | 3.3:+73693306 | MS.gene73788:CDS |
ACACATCATCCAAGGCACAC+CGG | 0.656038 | 3.3:-73694331 | None:intergenic |
GACCAACGATGTTCTGTCGT+AGG | 0.656925 | 3.3:-73690422 | None:intergenic |
GCATGCAATGGCATGCAATG+TGG | 0.659047 | 3.3:+73694560 | MS.gene73788:CDS |
TTATACTTGAAGAAGAAACC+GGG | 0.659840 | 3.3:+73698124 | MS.gene73788:CDS |
TCAAAATCATGGGAGAGTGG+TGG | 0.675828 | 3.3:+73690335 | None:intergenic |
GCTCTACTAAACCACTCACA+TGG | 0.681185 | 3.3:+73697187 | MS.gene73788:CDS |
TTGGTTAGACAACCAAAATG+GGG | 0.683195 | 3.3:+73695148 | MS.gene73788:CDS |
TCTCTTTGCACCGTCCATGG+TGG | 0.685695 | 3.3:+73690391 | MS.gene73788:CDS |
AATGTGGGAGAAACTTTAAG+GGG | 0.688593 | 3.3:+73694576 | MS.gene73788:CDS |
TGTCTAGAGTGATTCCTAAG+GGG | 0.698523 | 3.3:-73698149 | None:intergenic |
ATTACCTGATACCATGTGAG+TGG | 0.707159 | 3.3:-73697198 | None:intergenic |
AATTTGATGCAGTACCATGG+AGG | 0.742597 | 3.3:+73694967 | MS.gene73788:intron |
CGTACCTGAGGAGTGCTACG+AGG | 0.747266 | 3.3:-73690490 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 73690343 | 73698191 | 73690343 | ID=MS.gene73788 |
chr3.3 | mRNA | 73690343 | 73698191 | 73690343 | ID=MS.gene73788.t1;Parent=MS.gene73788 |
chr3.3 | exon | 73690343 | 73690507 | 73690343 | ID=MS.gene73788.t1.exon1;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73690343 | 73690507 | 73690343 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73693237 | 73693332 | 73693237 | ID=MS.gene73788.t1.exon2;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73693237 | 73693332 | 73693237 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73693643 | 73693755 | 73693643 | ID=MS.gene73788.t1.exon3;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73693643 | 73693755 | 73693643 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73693889 | 73693955 | 73693889 | ID=MS.gene73788.t1.exon4;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73693889 | 73693955 | 73693889 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73694053 | 73694145 | 73694053 | ID=MS.gene73788.t1.exon5;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73694053 | 73694145 | 73694053 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73694237 | 73694380 | 73694237 | ID=MS.gene73788.t1.exon6;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73694237 | 73694380 | 73694237 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73694554 | 73694648 | 73694554 | ID=MS.gene73788.t1.exon7;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73694554 | 73694648 | 73694554 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73694777 | 73694882 | 73694777 | ID=MS.gene73788.t1.exon8;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73694777 | 73694882 | 73694777 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73694979 | 73695063 | 73694979 | ID=MS.gene73788.t1.exon9;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73694979 | 73695063 | 73694979 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73695146 | 73695264 | 73695146 | ID=MS.gene73788.t1.exon10;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73695146 | 73695264 | 73695146 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73695445 | 73695603 | 73695445 | ID=MS.gene73788.t1.exon11;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73695445 | 73695603 | 73695445 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73695775 | 73695956 | 73695775 | ID=MS.gene73788.t1.exon12;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73695775 | 73695956 | 73695775 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73696078 | 73696169 | 73696078 | ID=MS.gene73788.t1.exon13;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73696078 | 73696169 | 73696078 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73696346 | 73696455 | 73696346 | ID=MS.gene73788.t1.exon14;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73696346 | 73696455 | 73696346 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73696760 | 73696852 | 73696760 | ID=MS.gene73788.t1.exon15;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73696760 | 73696852 | 73696760 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73697111 | 73697215 | 73697111 | ID=MS.gene73788.t1.exon16;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73697111 | 73697215 | 73697111 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73697518 | 73697663 | 73697518 | ID=MS.gene73788.t1.exon17;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73697518 | 73697663 | 73697518 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
chr3.3 | exon | 73698077 | 73698191 | 73698077 | ID=MS.gene73788.t1.exon18;Parent=MS.gene73788.t1 |
chr3.3 | CDS | 73698077 | 73698191 | 73698077 | ID=cds.MS.gene73788.t1;Parent=MS.gene73788.t1 |
Gene Sequence |
Protein sequence |