AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75351

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75351.t1 MTR_4g010210 61.202 366 38 6 240 508 3 361 1.97e-124 369
MS.gene75351.t1 MTR_1g055175 79.781 183 36 1 26 208 14 195 1.17e-99 299
MS.gene75351.t1 MTR_1g055165 81.481 162 30 0 47 208 151 312 4.21e-87 271
MS.gene75351.t1 MTR_1g055135 65.550 209 62 5 14 216 171 375 2.58e-78 251
MS.gene75351.t1 MTR_1g055195 64.362 188 59 6 26 208 288 472 1.27e-70 234
MS.gene75351.t1 MTR_1g055250 49.805 257 68 5 9 213 14 261 2.28e-68 223
MS.gene75351.t1 MTR_5g097210 58.883 197 75 4 14 208 165 357 6.09e-67 221
MS.gene75351.t1 MTR_4g118370 53.140 207 71 7 7 208 69 254 9.08e-64 209
MS.gene75351.t1 MTR_4g117720 56.614 189 70 7 26 208 189 371 1.04e-58 199
MS.gene75351.t1 MTR_4g117750 56.316 190 72 5 26 208 168 353 1.26e-56 197
MS.gene75351.t1 MTR_4g117750 53.774 106 46 3 105 208 373 477 1.71e-23 103
MS.gene75351.t1 MTR_6g060650 54.348 184 76 5 26 208 191 367 6.58e-56 192
MS.gene75351.t1 MTR_4g109280 55.851 188 67 8 26 207 175 352 9.75e-55 188
MS.gene75351.t1 MTR_3g103020 53.403 191 72 6 26 208 191 372 2.04e-50 177
MS.gene75351.t1 MTR_4g122850 47.938 194 93 6 26 215 177 366 1.93e-48 172
MS.gene75351.t1 MTR_3g034180 50.794 189 81 6 26 208 301 483 5.20e-48 174
MS.gene75351.t1 MTR_4g118400 50.543 184 71 8 26 208 130 294 2.52e-46 164
MS.gene75351.t1 MTR_4g117850 49.738 191 79 6 26 207 191 373 2.81e-46 166
MS.gene75351.t1 MTR_4g118380 50.877 171 68 5 26 186 193 357 5.30e-46 165
MS.gene75351.t1 MTR_5g070080 51.351 185 82 5 26 208 201 379 5.54e-46 166
MS.gene75351.t1 MTR_8g433030 51.832 191 72 7 26 208 158 336 6.36e-46 164
MS.gene75351.t1 MTR_4g109270 50.000 190 79 7 26 208 178 358 2.25e-45 163
MS.gene75351.t1 MTR_8g032390 51.832 191 72 7 26 208 191 369 3.50e-45 163
MS.gene75351.t1 MTR_3g034130 49.189 185 75 6 26 200 187 362 7.27e-45 162
MS.gene75351.t1 MTR_4g094365 47.849 186 88 5 26 208 179 358 1.54e-44 161
MS.gene75351.t1 MTR_4g116330 47.594 187 88 6 26 208 194 374 2.06e-44 161
MS.gene75351.t1 MTR_3g034160 51.323 189 80 5 26 208 187 369 3.93e-44 160
MS.gene75351.t1 MTR_4g116320 55.128 156 67 3 55 208 98 252 1.67e-43 155
MS.gene75351.t1 MTR_5g070130 47.668 193 86 7 26 208 183 370 3.30e-43 158
MS.gene75351.t1 MTR_6g463430 47.568 185 86 6 26 208 21 196 1.24e-42 151
MS.gene75351.t1 MTR_8g040935 48.958 192 81 8 26 208 19 202 1.37e-42 151
MS.gene75351.t1 MTR_5g070088 47.849 186 89 5 26 208 199 379 2.86e-41 153
MS.gene75351.t1 MTR_7g079400 46.032 189 93 5 26 208 146 331 1.98e-40 149
MS.gene75351.t1 MTR_4g023080 45.652 184 89 5 26 207 173 347 6.80e-40 148
MS.gene75351.t1 MTR_4g023130 46.196 184 88 5 26 207 132 306 9.46e-40 147
MS.gene75351.t1 MTR_8g433040 47.059 187 77 6 26 208 190 358 9.63e-40 148
MS.gene75351.t1 MTR_8g032380 47.059 187 77 6 26 208 190 358 9.63e-40 148
MS.gene75351.t1 MTR_4g023380 39.091 220 91 6 18 208 166 371 1.77e-38 145
MS.gene75351.t1 MTR_4g117780 47.619 189 87 7 26 208 179 361 2.29e-38 144
MS.gene75351.t1 MTR_4g117770 47.872 188 88 6 26 208 179 361 3.03e-38 144
MS.gene75351.t1 MTR_4g117810 47.872 188 88 6 26 208 179 361 3.03e-38 144
MS.gene75351.t1 MTR_8g102520 44.920 187 94 6 26 208 135 316 7.28e-38 142
MS.gene75351.t1 MTR_4g114770 62.931 116 41 2 224 338 22 136 7.03e-37 140
MS.gene75351.t1 MTR_4g021785 45.946 185 88 7 26 207 173 348 8.33e-37 140
MS.gene75351.t1 MTR_4g023070 41.256 223 102 9 4 207 151 363 4.09e-36 138
MS.gene75351.t1 MTR_4g023190 50.000 158 68 6 58 208 200 353 4.09e-36 138
MS.gene75351.t1 MTR_4g023090 46.108 167 71 6 58 208 215 378 7.80e-35 135
MS.gene75351.t1 MTR_4g023150 43.750 192 81 8 29 208 178 354 8.74e-35 134
MS.gene75351.t1 MTR_4g118360 60.952 105 38 3 105 208 18 120 1.44e-34 127
MS.gene75351.t1 MTR_4g117870 51.493 134 59 2 75 208 134 261 2.95e-34 130
MS.gene75351.t1 MTR_4g117530 41.848 184 68 6 26 208 102 247 2.13e-33 127
MS.gene75351.t1 MTR_4g023120 38.739 222 109 7 4 207 151 363 4.32e-33 130
MS.gene75351.t1 MTR_4g023200 42.781 187 90 8 29 208 178 354 6.97e-33 129
MS.gene75351.t1 MTR_7g079420 44.382 178 88 7 37 208 966 1138 5.06e-32 131
MS.gene75351.t1 MTR_0339s0010 64.000 100 34 2 240 338 1 99 1.50e-31 124
MS.gene75351.t1 MTR_4g114770 64.000 100 34 2 240 338 16 114 1.83e-31 124
MS.gene75351.t1 MTR_4g114785 62.366 93 33 2 224 315 22 113 5.74e-30 117
MS.gene75351.t1 MTR_0339s0020 64.835 91 28 2 224 314 22 108 7.60e-30 120
MS.gene75351.t1 MTR_7g079370 41.799 189 96 8 26 208 170 350 1.72e-29 119
MS.gene75351.t1 MTR_2g048580 38.172 186 100 7 26 208 163 336 3.62e-28 115
MS.gene75351.t1 MTR_7g079450 45.113 133 69 3 76 208 3 131 1.53e-27 107
MS.gene75351.t1 MTR_4g122860 36.788 193 85 7 22 208 153 314 3.50e-27 112
MS.gene75351.t1 MTR_8g098830 38.542 192 90 6 15 182 7 194 2.07e-26 107
MS.gene75351.t1 MTR_6g060860 46.324 136 68 5 220 353 17 149 9.09e-26 104
MS.gene75351.t1 MTR_6g060845 51.304 115 51 5 220 331 17 129 1.70e-25 102
MS.gene75351.t1 MTR_1g055145 65.060 83 28 1 48 130 121 202 1.77e-25 106
MS.gene75351.t1 MTR_6g060685 46.324 136 68 5 220 353 58 190 2.95e-25 103
MS.gene75351.t1 MTR_6g060860 51.304 115 51 5 220 331 58 170 4.94e-25 102
MS.gene75351.t1 MTR_5g023000 57.609 92 29 3 122 208 7 93 9.80e-25 99.0
MS.gene75351.t1 MTR_4g116330 37.766 188 66 8 26 208 194 335 5.35e-23 100
MS.gene75351.t1 MTR_6g060845 52.083 96 42 4 238 331 20 113 4.30e-22 92.0
MS.gene75351.t1 MTR_4g023440 33.333 207 79 7 11 208 170 326 3.81e-21 95.1
MS.gene75351.t1 MTR_6g052050 55.294 85 34 3 240 323 28 109 9.92e-21 88.2
MS.gene75351.t1 MTR_4g121580 36.364 187 73 12 26 204 191 339 6.99e-17 83.2
MS.gene75351.t1 MTR_7g117720 45.000 100 51 3 113 208 172 271 6.64e-16 78.6
MS.gene75351.t1 MTR_4g114700 32.787 183 70 7 26 205 86 218 7.26e-16 77.8
MS.gene75351.t1 MTR_8g013010 47.191 89 38 3 26 114 230 309 4.69e-15 76.6
MS.gene75351.t1 MTR_4g117430 45.055 91 40 4 26 114 70 152 6.50e-14 69.7
MS.gene75351.t1 MTR_8g013005 59.259 54 21 1 155 208 1 53 2.49e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75351.t1 AT3G15790 39.273 275 127 9 224 490 6 248 1.83e-36 136
MS.gene75351.t1 AT3G15790 39.273 275 127 9 224 490 6 248 1.83e-36 136
MS.gene75351.t1 AT3G15790 39.273 275 127 9 224 490 6 248 1.83e-36 136
MS.gene75351.t1 AT1G15340 59.615 104 42 0 219 322 1 104 1.44e-34 134
MS.gene75351.t1 AT1G15340 65.455 55 19 0 219 273 1 55 1.08e-18 87.8

Find 119 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTGTTCCTTTCTTCTT+AGG 0.082097 4.2:-89992020 None:intergenic
TATTGTTGCCTTTGATTTAA+TGG 0.091455 4.2:+89989267 MS.gene75351:CDS
TTCAACTGGTTCTTCCTCTT+TGG 0.164665 4.2:-89992702 None:intergenic
GTACTTCTTCAATTGTCTTT+TGG 0.222954 4.2:-89992090 None:intergenic
CTGGTAACCTCATTAGGATT+TGG 0.235244 4.2:-89988616 None:intergenic
TCAACTGGTTCTTCCTCTTT+GGG 0.249140 4.2:-89992701 None:intergenic
TGCAGGTGGTGGGGTTGTTT+TGG 0.254402 4.2:-89992204 None:intergenic
GTTGGAACAGATTGCGTTAC+TGG 0.254941 4.2:+89989529 MS.gene75351:CDS
TTAGAGGATTTCTAAGTCTA+TGG 0.269614 4.2:+89989362 MS.gene75351:CDS
TTGATAATGAAAGTGTTATT+TGG 0.275617 4.2:+89992906 MS.gene75351:CDS
AGAAAATAGTAAAGCTGAAT+TGG 0.281852 4.2:+89992592 MS.gene75351:CDS
GATTCCCAGAATGGTTATTC+AGG 0.307877 4.2:-89992112 None:intergenic
GGCGGAGGTGGCGGAGCTTA+TGG 0.311842 4.2:+89988553 MS.gene75351:CDS
ACTTAACTGGTAACCTCATT+AGG 0.314398 4.2:-89988622 None:intergenic
ACGAGTATACGGTTGATATA+TGG 0.318993 4.2:+89989395 MS.gene75351:CDS
AAGTACCTGAATAACCATTC+TGG 0.324491 4.2:+89992107 MS.gene75351:CDS
AGAAATATCGATGGCGGAAC+CGG 0.325360 4.2:+89992490 MS.gene75351:CDS
TCAGAGGAAGCCAAGGAAAA+AGG 0.326439 4.2:+89992308 MS.gene75351:intron
GCTCAGCTTGTGCAGGTGGT+GGG 0.331053 4.2:-89992214 None:intergenic
CTGACATATCAGAGTTTGAT+TGG 0.338629 4.2:+89992135 MS.gene75351:CDS
AATGTTGAAGATATCATTAA+TGG 0.339503 4.2:+89992815 MS.gene75351:CDS
AGAGGAAGAACCAGTTGAAT+TGG 0.351346 4.2:+89992706 MS.gene75351:CDS
GTTGAATTGGAAAAGGAAAA+TGG 0.358117 4.2:+89992719 MS.gene75351:CDS
GGCTCAGCTTGTGCAGGTGG+TGG 0.361451 4.2:-89992215 None:intergenic
TTTGATTTATGGGTATTTAG+AGG 0.361936 4.2:+89989346 MS.gene75351:CDS
TGGTAACCTCATTAGGATTT+GGG 0.365671 4.2:-89988615 None:intergenic
TGATGATCGCCTTGGTGTCT+TGG 0.372239 4.2:-89992165 None:intergenic
ATTTCTAAGTCTATGGGTTA+TGG 0.375932 4.2:+89989369 MS.gene75351:CDS
TATTGCAAAGATTCACGAAA+TGG 0.386661 4.2:+89989598 MS.gene75351:CDS
AAATACCAGTTTCTTCCAAT+TGG 0.388944 4.2:-89990256 None:intergenic
AACTCTCTGCTCCTTCCAAT+TGG 0.391579 4.2:+89990241 MS.gene75351:CDS
GGTTATGGTGGACGAGTATA+CGG 0.392883 4.2:+89989384 MS.gene75351:CDS
CGAGTATACGGTTGATATAT+GGG 0.394457 4.2:+89989396 MS.gene75351:CDS
TCGTGAATCTTTGCAATAGT+TGG 0.395158 4.2:-89989593 None:intergenic
GAACGATAATCAATATCATC+TGG 0.398645 4.2:-89989316 None:intergenic
TTCGGAGGCTCAGCTTGTGC+AGG 0.403009 4.2:-89992221 None:intergenic
GATGAAAAGCAAACAATTCA+AGG 0.406252 4.2:+89992860 MS.gene75351:CDS
GCTCTACTTGTTTGTGCCAT+GGG 0.411028 4.2:-89989660 None:intergenic
ATTGAAGACCGCCTCTACTA+AGG 0.411533 4.2:-89989197 None:intergenic
TCCTTCCAATTGGAAGAAAC+TGG 0.411901 4.2:+89990251 MS.gene75351:CDS
GAGGCAGCCTTACTACAAAA+AGG 0.416722 4.2:-89989160 None:intergenic
AATACAAAGTGCAGTCATCT+TGG 0.424763 4.2:+89989428 MS.gene75351:CDS
TTGGTGTTCCTTTCTTCTTA+GGG 0.429693 4.2:-89992019 None:intergenic
GGAGCTTATGGCGGAGGTGG+CGG 0.430233 4.2:+89988565 MS.gene75351:CDS
TGTCACTGAAAAGCCGCAAT+TGG 0.432666 4.2:+89992451 MS.gene75351:CDS
TGACATATCAGAGTTTGATT+GGG 0.437668 4.2:+89992136 MS.gene75351:CDS
CTCAGCTTGTGCAGGTGGTG+GGG 0.439388 4.2:-89992213 None:intergenic
TGCTCTACTTGTTTGTGCCA+TGG 0.439938 4.2:-89989661 None:intergenic
CAATGGAGCTATTCACTGGT+TGG 0.445876 4.2:+89989216 MS.gene75351:CDS
TCTCACTCAGAGCTAATGAA+TGG 0.447110 4.2:+89989110 MS.gene75351:intron
AGGAAGACGCATGGCGGAGG+TGG 0.448131 4.2:+89988541 None:intergenic
TTAGTAGAGGCGGTCTTCAA+TGG 0.454485 4.2:+89989199 MS.gene75351:CDS
ACTACTGATGATACCATTGA+TGG 0.457074 4.2:+89989469 MS.gene75351:CDS
GAACTTATCTCTTCTCCAGT+TGG 0.457485 4.2:-89992068 None:intergenic
TGATGAACAAGTGAAGAAAA+TGG 0.458019 4.2:+89992883 MS.gene75351:CDS
AGTACCTGAATAACCATTCT+GGG 0.461208 4.2:+89992108 MS.gene75351:CDS
GGCGGAGCTTATGGCGGAGG+TGG 0.465178 4.2:+89988562 MS.gene75351:CDS
AAGACGCATGGCGGAGGTGG+CGG 0.468038 4.2:+89988544 None:intergenic
TGATATTGATTATCGTTCTA+CGG 0.471118 4.2:+89989321 MS.gene75351:CDS
TTTCCTTTCCATTAAATCAA+AGG 0.478785 4.2:-89989275 None:intergenic
AAACGTAGTCGAAAATCATC+TGG 0.479428 4.2:+89992245 MS.gene75351:CDS
ATTGACGTTATCAGCATCAC+TGG 0.483149 4.2:-89992363 None:intergenic
CAATCAAACTCTGATATGTC+AGG 0.483410 4.2:-89992134 None:intergenic
ACCAGTTTCTTCCAATTGGA+AGG 0.486997 4.2:-89990252 None:intergenic
AGTTACAAGCAGGAGAAATC+CGG 0.493425 4.2:+89992755 MS.gene75351:CDS
TAGAGGATTTCTAAGTCTAT+GGG 0.497173 4.2:+89989363 MS.gene75351:CDS
GGAGCAACGAAAACGATCTC+AGG 0.499081 4.2:-89992047 None:intergenic
ATTTGGGTGATCAATTCATC+AGG 0.500913 4.2:-89988599 None:intergenic
AGAACCAGTTGAATTGGAAA+AGG 0.503470 4.2:+89992712 MS.gene75351:CDS
CTAATCCTTGATGATCGCCT+TGG 0.506450 4.2:-89992173 None:intergenic
TACAGGGGAAACACCATCAA+TGG 0.508026 4.2:-89989482 None:intergenic
ATCAATTCATCAGGCAGATA+CGG 0.511263 4.2:-89988590 None:intergenic
CTCACTCAGAGCTAATGAAT+GGG 0.511679 4.2:+89989111 MS.gene75351:intron
TCTTCAATGGAGCTATTCAC+TGG 0.513798 4.2:+89989212 MS.gene75351:CDS
AACAGATTGCGTTACTGGAT+TGG 0.516231 4.2:+89989534 MS.gene75351:CDS
TCCACAGAAAGTTGTTCCAC+CGG 0.516693 4.2:-89992650 None:intergenic
CAGTTCTTCCCTAAGAAGAA+AGG 0.518232 4.2:+89992011 MS.gene75351:intron
AGGGGAGGCACCAGTTGAGT+TGG 0.522143 4.2:+89992565 MS.gene75351:CDS
AGAAACATCTGTGGTTGAAC+CGG 0.528424 4.2:+89992631 MS.gene75351:CDS
AGCTGATAGCAGTTACAAGC+AGG 0.530507 4.2:+89992745 MS.gene75351:CDS
TTGCCTTTGATTTAATGGAA+AGG 0.533360 4.2:+89989272 MS.gene75351:CDS
AGTCTTTGCTTTCACTCCCA+TGG 0.535002 4.2:+89989644 MS.gene75351:CDS
TTGAAGACCGCCTCTACTAA+GGG 0.537668 4.2:-89989196 None:intergenic
GGTGGCGGAGCTTATGGCGG+AGG 0.543402 4.2:+89988559 MS.gene75351:CDS
ATATGTCAGGATTCCCAGAA+TGG 0.543833 4.2:-89992121 None:intergenic
GGAGGCTCAGCTTGTGCAGG+TGG 0.548233 4.2:-89992218 None:intergenic
CAGAGGAAGACGCATGGCGG+AGG 0.548295 4.2:+89988538 None:intergenic
TTCACGAAATGGATTCCGAT+TGG 0.548703 4.2:+89989609 MS.gene75351:CDS
TGATCGCCTTGGTGTCTTGG+CGG 0.550753 4.2:-89992162 None:intergenic
AACTCCTTCAGAGGAAGCCA+AGG 0.553718 4.2:+89992301 MS.gene75351:intron
ACCGGTGGAACAACTTTCTG+TGG 0.554252 4.2:+89992649 MS.gene75351:CDS
CTCTACTAAGGGATAATCAA+AGG 0.556603 4.2:-89989185 None:intergenic
GGTAATTAAACAAAGTAATG+TGG 0.560022 4.2:+89992412 MS.gene75351:CDS
TAAGGGATAATCAAAGGAAG+AGG 0.560601 4.2:-89989179 None:intergenic
ACAGATGTTTCTTCCACTTG+AGG 0.562567 4.2:-89992620 None:intergenic
CTTTGATTATCCCTTAGTAG+AGG 0.564980 4.2:+89989186 MS.gene75351:CDS
ACTCTGTATACATAGCCAAT+CGG 0.573189 4.2:-89989624 None:intergenic
AACGATAATCAATATCATCT+GGG 0.573852 4.2:-89989315 None:intergenic
AGACACCAAGGCGATCATCA+AGG 0.580522 4.2:+89992168 MS.gene75351:CDS
TGATCACCCAAATCCTAATG+AGG 0.585524 4.2:+89988609 MS.gene75351:CDS
AACATCTGTGGTTGAACCGG+TGG 0.593055 4.2:+89992634 MS.gene75351:CDS
TCTAAGTCTATGGGTTATGG+TGG 0.598732 4.2:+89989372 MS.gene75351:CDS
GACATATCAGAGTTTGATTG+GGG 0.603872 4.2:+89992137 MS.gene75351:CDS
TTTCGACTACGTTTCTTCGG+AGG 0.606353 4.2:-89992236 None:intergenic
TGATTATCCCTTAGTAGAGG+CGG 0.612867 4.2:+89989189 MS.gene75351:CDS
TAATCAATATCATCTGGGAG+AGG 0.613479 4.2:-89989310 None:intergenic
GCAGGAGAAATCCGGCGCAG+AGG 0.617471 4.2:+89992763 MS.gene75351:CDS
GCAATTGGAAAAGCATCAAG+TGG 0.623475 4.2:+89992466 MS.gene75351:CDS
GGAGGTGGCGGAGCTTATGG+CGG 0.624050 4.2:+89988556 MS.gene75351:CDS
TGAATTGGAAAAGCCTCAAG+TGG 0.640871 4.2:+89992607 MS.gene75351:CDS
AATAAAGATTGACGATGCAG+AGG 0.649259 4.2:+89992391 MS.gene75351:CDS
GGGGAACCGCCAAGACACCA+AGG 0.669363 4.2:+89992156 MS.gene75351:CDS
TAATGAATGGGAAGAAATCG+TGG 0.669771 4.2:+89989123 MS.gene75351:CDS
TCAAGTGGAAGAAATATCGA+TGG 0.670883 4.2:+89992481 MS.gene75351:CDS
TTGACGTTATCAGCATCACT+GGG 0.676786 4.2:-89992362 None:intergenic
AGTGGAAGAAATATCGATGG+CGG 0.684152 4.2:+89992484 MS.gene75351:CDS
TCAAGTGGAAGAAACATCTG+TGG 0.701625 4.2:+89992622 MS.gene75351:CDS
TCCGGCGCAGAGGAAAACGA+AGG 0.703991 4.2:+89992773 MS.gene75351:CDS
TTGGTGAGATATGATGACAA+AGG 0.738918 4.2:+89989553 MS.gene75351:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAAATATCTAGAAAA+TGG - chr4.2:89989710-89989729 None:intergenic 10.0%
!!! AATTAACTTTTTTTTTTTGA+AGG + chr4.2:89990775-89990794 MS.gene75351:intron 10.0%
!!! TTTTTATTTTTTGTTTTTGT+GGG + chr4.2:89991233-89991252 MS.gene75351:intron 10.0%
!!! TTTTTTATTTTTTGTTTTTG+TGG + chr4.2:89991232-89991251 MS.gene75351:intron 10.0%
!! AAATCACATAAAAAAAATCA+AGG - chr4.2:89990445-89990464 None:intergenic 15.0%
!! AAGCTAATAAAAAAAATCAA+AGG - chr4.2:89990470-89990489 None:intergenic 15.0%
!! ACTATTTGTAATATGTTTAT+TGG + chr4.2:89989824-89989843 MS.gene75351:intron 15.0%
!!! ATTCAATTGTTCATTTTTTT+AGG + chr4.2:89990649-89990668 MS.gene75351:intron 15.0%
!!! ATTGTTTTATAACGTATTTT+TGG + chr4.2:89991978-89991997 MS.gene75351:intron 15.0%
!!! ATTTTGAAGTTTTTGTTTTT+TGG + chr4.2:89991180-89991199 MS.gene75351:intron 15.0%
!!! CATTTTGATATTCAATTTAA+AGG + chr4.2:89988899-89988918 MS.gene75351:intron 15.0%
!!! GTAAAATGTTTATGTTTTTT+TGG + chr4.2:89989798-89989817 MS.gene75351:intron 15.0%
!!! TCAATTGTTCATATTTTATA+GGG + chr4.2:89990180-89990199 MS.gene75351:intron 15.0%
!!! TTCAATTGTTCATATTTTAT+AGG + chr4.2:89990179-89990198 MS.gene75351:intron 15.0%
!!! TTCAATTGTTCATTTTTTTA+GGG + chr4.2:89990650-89990669 MS.gene75351:intron 15.0%
!!! TTTTGAAGTTTTTGTTTTTT+GGG + chr4.2:89991181-89991200 MS.gene75351:intron 15.0%
!! AAAAGTTTATTCATACTTGA+TGG + chr4.2:89990117-89990136 MS.gene75351:intron 20.0%
!! AAACAAATCAAAACTTTACA+AGG - chr4.2:89991215-89991234 None:intergenic 20.0%
!! AAACTTAAATGTGAAACATT+TGG - chr4.2:89989016-89989035 None:intergenic 20.0%
!! AATGTTGAAGATATCATTAA+TGG + chr4.2:89992815-89992834 MS.gene75351:CDS 20.0%
!! ACTTGTAAAAAAACAGAATT+GGG + chr4.2:89990947-89990966 MS.gene75351:intron 20.0%
!! AGATACATATGCATAAATAA+CGG - chr4.2:89989880-89989899 None:intergenic 20.0%
!! TAATAAAGCATACAACTAAA+AGG - chr4.2:89991953-89991972 None:intergenic 20.0%
!! TAATGTTATGAAGAATTTAG+TGG + chr4.2:89990838-89990857 MS.gene75351:intron 20.0%
!! TACTTGTAAAAAAACAGAAT+TGG + chr4.2:89990946-89990965 MS.gene75351:intron 20.0%
!! TTCTTGAAATTACTTAAGTT+AGG + chr4.2:89991157-89991176 MS.gene75351:intron 20.0%
!! TTTGTTTAAACGCTTATATA+TGG + chr4.2:89988951-89988970 MS.gene75351:intron 20.0%
!!! AAAAACATAAACATTTTACG+AGG - chr4.2:89989797-89989816 None:intergenic 20.0%
!!! AACATTTTCTAAACTATTCT+AGG + chr4.2:89991668-89991687 MS.gene75351:intron 20.0%
!!! ATTTAAGTTTCTATGGTTTT+GGG + chr4.2:89989026-89989045 MS.gene75351:intron 20.0%
!!! CTTCAGAATGTTATATTTTT+TGG + chr4.2:89991623-89991642 MS.gene75351:intron 20.0%
!!! TTGATAATGAAAGTGTTATT+TGG + chr4.2:89992906-89992925 MS.gene75351:CDS 20.0%
!!! TTTAGTTGTATGCTTTATTA+TGG + chr4.2:89991953-89991972 MS.gene75351:intron 20.0%
! AAAAATTATCTGAATCACAC+AGG - chr4.2:89991435-89991454 None:intergenic 25.0%
! AAAATTATCTGAATCACACA+GGG - chr4.2:89991434-89991453 None:intergenic 25.0%
! AAATATCTAGAAAATGGTGA+AGG - chr4.2:89989704-89989723 None:intergenic 25.0%
! AAATCTATAGATCGAAATTC+AGG - chr4.2:89988809-89988828 None:intergenic 25.0%
! AACAGGTTCATTATAATCAT+CGG - chr4.2:89988846-89988865 None:intergenic 25.0%
! AACGATAATCAATATCATCT+GGG - chr4.2:89989318-89989337 None:intergenic 25.0%
! AATTTAAAGGTTCATGTAGA+GGG + chr4.2:89988912-89988931 MS.gene75351:intron 25.0%
! AGAAAATAGTAAAGCTGAAT+TGG + chr4.2:89992592-89992611 MS.gene75351:CDS 25.0%
! CTTACTGTTTAGTGATTTAT+TGG + chr4.2:89991716-89991735 MS.gene75351:intron 25.0%
! CTTGTAAAAAAACAGAATTG+GGG + chr4.2:89990948-89990967 MS.gene75351:intron 25.0%
! GGTAATTAAACAAAGTAATG+TGG + chr4.2:89992412-89992431 MS.gene75351:CDS 25.0%
! GTTATTTATGCATATGTATC+TGG + chr4.2:89989879-89989898 MS.gene75351:intron 25.0%
! TGAATATCAAAATGAGATTC+TGG - chr4.2:89988893-89988912 None:intergenic 25.0%
! TGTGCTCATGTTATAAATTT+CGG - chr4.2:89989759-89989778 None:intergenic 25.0%
! TGTTGCTAACATGTTTATAT+TGG + chr4.2:89991923-89991942 MS.gene75351:intron 25.0%
! TTAAATGTGAAACATTTGGA+GGG - chr4.2:89989012-89989031 None:intergenic 25.0%
! TTTCCTTTCCATTAAATCAA+AGG - chr4.2:89989278-89989297 None:intergenic 25.0%
!! AATCTAAGATGTTCAACATT+GGG + chr4.2:89991256-89991275 MS.gene75351:intron 25.0%
!! GTTTAGAAAATGTTATTTGC+CGG - chr4.2:89991662-89991681 None:intergenic 25.0%
!! GTTTCACATTTAAGTTTCTA+TGG + chr4.2:89989019-89989038 MS.gene75351:intron 25.0%
!! TATGTGTTAATGTTGCTTAT+TGG + chr4.2:89991874-89991893 MS.gene75351:intron 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG + chr4.2:89989267-89989286 MS.gene75351:CDS 25.0%
!! TGATATTGATTATCGTTCTA+CGG + chr4.2:89989321-89989340 MS.gene75351:CDS 25.0%
!! TTTGATTTATGGGTATTTAG+AGG + chr4.2:89989346-89989365 MS.gene75351:CDS 25.0%
!!! ACAACTTTTTGAGAAATCTT+TGG + chr4.2:89992517-89992536 MS.gene75351:CDS 25.0%
!!! AGTGCTAAATTTTGTTTCTA+GGG + chr4.2:89991081-89991100 MS.gene75351:intron 25.0%
!!! ATGCTTGGAATTGTTTTATA+TGG + chr4.2:89990015-89990034 MS.gene75351:intron 25.0%
!!! ATTTTATCCAAAATGGATTC+TGG + chr4.2:89991535-89991554 MS.gene75351:intron 25.0%
!!! CACTTTGATTTTATCCAAAA+TGG + chr4.2:89991528-89991547 MS.gene75351:intron 25.0%
!!! CATTTAAGTTTCTATGGTTT+TGG + chr4.2:89989025-89989044 MS.gene75351:intron 25.0%
!!! GAATTGTTTTATATGGTAAG+TGG + chr4.2:89990022-89990041 MS.gene75351:intron 25.0%
!!! GTAGAAATTGGTTTTTAACA+AGG + chr4.2:89991278-89991297 MS.gene75351:intron 25.0%
!!! GTTATTGTTATTTGTTACTG+TGG + chr4.2:89990713-89990732 MS.gene75351:intron 25.0%
!!! TAGTGCTAAATTTTGTTTCT+AGG + chr4.2:89991080-89991099 MS.gene75351:intron 25.0%
!!! TCAGTTTTGTATGATTACTT+GGG + chr4.2:89989082-89989101 MS.gene75351:intron 25.0%
!!! TTCAGTTTTGTATGATTACT+TGG + chr4.2:89989081-89989100 MS.gene75351:intron 25.0%
!!! TTCTACGGATTTTGATTTAT+GGG + chr4.2:89989336-89989355 MS.gene75351:CDS 25.0%
AAAACCTAGTACCAAATTCA+AGG - chr4.2:89991125-89991144 None:intergenic 30.0%
AAACGAATAAGAGACTTAAC+TGG - chr4.2:89988638-89988657 None:intergenic 30.0%
AAATACCAGTTTCTTCCAAT+TGG - chr4.2:89990259-89990278 None:intergenic 30.0%
ACAAAAAGTGGTGATATTGT+TGG + chr4.2:89989511-89989530 MS.gene75351:CDS 30.0%
ACCTAGTACCAAATTCTAAA+AGG - chr4.2:89991011-89991030 None:intergenic 30.0%
ACTGTTAAGAAGAGAATTCT+AGG - chr4.2:89988749-89988768 None:intergenic 30.0%
AGAAAACCATGACTTAGAAA+CGG - chr4.2:89988666-89988685 None:intergenic 30.0%
AGGTATTTGTCTATGAAATC+CGG - chr4.2:89988987-89989006 None:intergenic 30.0%
ATAAAATCAAAGTGCAAAGC+AGG - chr4.2:89991522-89991541 None:intergenic 30.0%
ATAAGTTCTTTGAGTCAAAG+CGG - chr4.2:89990095-89990114 None:intergenic 30.0%
ATCAAAAGATGATTACTTGG+TGG + chr4.2:89989057-89989076 MS.gene75351:intron 30.0%
CAATTTAAAGGTTCATGTAG+AGG + chr4.2:89988911-89988930 MS.gene75351:intron 30.0%
CGAATCAAAAGATGATTACT+TGG + chr4.2:89989054-89989073 MS.gene75351:intron 30.0%
CTGTAAATTAAACCCCATTT+AGG - chr4.2:89990886-89990905 None:intergenic 30.0%
CTTAAATGTGAAACATTTGG+AGG - chr4.2:89989013-89989032 None:intergenic 30.0%
GAACGATAATCAATATCATC+TGG - chr4.2:89989319-89989338 None:intergenic 30.0%
GATGAAAAGCAAACAATTCA+AGG + chr4.2:89992860-89992879 MS.gene75351:CDS 30.0%
GTTGAATTGGAAAAGGAAAA+TGG + chr4.2:89992719-89992738 MS.gene75351:CDS 30.0%
TAAAATCAAAGTGCAAAGCA+GGG - chr4.2:89991521-89991540 None:intergenic 30.0%
TAATCATCGGTAAACAATGA+CGG - chr4.2:89988833-89988852 None:intergenic 30.0%
TAGAGGATTTCTAAGTCTAT+GGG + chr4.2:89989363-89989382 MS.gene75351:CDS 30.0%
TATTGCAAAGATTCACGAAA+TGG + chr4.2:89989598-89989617 MS.gene75351:CDS 30.0%
TGACATATCAGAGTTTGATT+GGG + chr4.2:89992136-89992155 MS.gene75351:CDS 30.0%
TGATGAACAAGTGAAGAAAA+TGG + chr4.2:89992883-89992902 MS.gene75351:CDS 30.0%
TGTTATGAAGAATTTAGTGG+TGG + chr4.2:89990841-89990860 MS.gene75351:intron 30.0%
TTAGAGGATTTCTAAGTCTA+TGG + chr4.2:89989362-89989381 MS.gene75351:CDS 30.0%
! ATTTCTAAGTCTATGGGTTA+TGG + chr4.2:89989369-89989388 MS.gene75351:CDS 30.0%
! GAATCTAAGATGTTCAACAT+TGG + chr4.2:89991255-89991274 MS.gene75351:intron 30.0%
! GGGGTTTAATTTACAGAATT+TGG + chr4.2:89990890-89990909 MS.gene75351:intron 30.0%
! GGTACTAGGTTTCAATTTTA+GGG + chr4.2:89991021-89991040 MS.gene75351:intron 30.0%
! GTACTTCTTCAATTGTCTTT+TGG - chr4.2:89992093-89992112 None:intergenic 30.0%
! TCTGTTTGCTTGTTCTTTTT+GGG + chr4.2:89991332-89991351 MS.gene75351:intron 30.0%
! TGGTACTAGGTTTCAATTTT+AGG + chr4.2:89991020-89991039 MS.gene75351:intron 30.0%
! TTACAAACCAGAATCCATTT+TGG - chr4.2:89991545-89991564 None:intergenic 30.0%
! TTATGCAGCTCAGATTTTTA+GGG + chr4.2:89990396-89990415 MS.gene75351:intron 30.0%
! TTGCCTTTGATTTAATGGAA+AGG + chr4.2:89989272-89989291 MS.gene75351:CDS 30.0%
! TTTATGCAGCTCAGATTTTT+AGG + chr4.2:89990395-89990414 MS.gene75351:intron 30.0%
! TTTTCCTTTTCCAATTCAAC+TGG - chr4.2:89992719-89992738 None:intergenic 30.0%
! TTTTCTTTTTCCAACTCAAC+TGG - chr4.2:89992578-89992597 None:intergenic 30.0%
! TTTTGGTGAAAATTATCCAC+CGG + chr4.2:89991640-89991659 MS.gene75351:intron 30.0%
!! CAGTTTTGTATGATTACTTG+GGG + chr4.2:89989083-89989102 MS.gene75351:intron 30.0%
!! GCTTTATTGATGTTGTCTTT+TGG + chr4.2:89991354-89991373 MS.gene75351:intron 30.0%
!! GTGATTTATTGGTGTTGATT+AGG + chr4.2:89991727-89991746 MS.gene75351:intron 30.0%
!! TGGTACTAGATTTTGTTTCT+AGG + chr4.2:89990910-89990929 MS.gene75351:intron 30.0%
!! TTTCTAGGGTTTACCTAAAT+GGG + chr4.2:89990870-89990889 MS.gene75351:intron 30.0%
!!! ACCTTTTAGAATTTGGTACT+AGG + chr4.2:89991007-89991026 MS.gene75351:intron 30.0%
!!! GGTACTAGATTTTGTTTCTA+GGG + chr4.2:89990911-89990930 MS.gene75351:intron 30.0%
!!! GTTCTACGGATTTTGATTTA+TGG + chr4.2:89989335-89989354 MS.gene75351:CDS 30.0%
!!! TTTCTAGGGTTTTCCTATAT+GGG + chr4.2:89990981-89991000 MS.gene75351:intron 30.0%
AAACGTAGTCGAAAATCATC+TGG + chr4.2:89992245-89992264 MS.gene75351:CDS 35.0%
AAACTAGGGTTTAGTGTAAC+AGG - chr4.2:89988863-89988882 None:intergenic 35.0%
AAGTACCTGAATAACCATTC+TGG + chr4.2:89992107-89992126 MS.gene75351:CDS 35.0%
AATAAAGATTGACGATGCAG+AGG + chr4.2:89992391-89992410 MS.gene75351:CDS 35.0%
AATACAAAGTGCAGTCATCT+TGG + chr4.2:89989428-89989447 MS.gene75351:CDS 35.0%
AATACAGAAAGATGCAGGAA+TGG - chr4.2:89991473-89991492 None:intergenic 35.0%
ACAGACCACAAATGGAAAAT+TGG - chr4.2:89991317-89991336 None:intergenic 35.0%
ACTACTGATGATACCATTGA+TGG + chr4.2:89989469-89989488 MS.gene75351:CDS 35.0%
ACTCTGTATACATAGCCAAT+CGG - chr4.2:89989627-89989646 None:intergenic 35.0%
ACTTAACTGGTAACCTCATT+AGG - chr4.2:89988625-89988644 None:intergenic 35.0%
AGAACCAGTTGAATTGGAAA+AGG + chr4.2:89992712-89992731 MS.gene75351:CDS 35.0%
AGTACCTGAATAACCATTCT+GGG + chr4.2:89992108-89992127 MS.gene75351:CDS 35.0%
ATCAATTCATCAGGCAGATA+CGG - chr4.2:89988593-89988612 None:intergenic 35.0%
ATTTGGGTGATCAATTCATC+AGG - chr4.2:89988602-89988621 None:intergenic 35.0%
CAATCAAACTCTGATATGTC+AGG - chr4.2:89992137-89992156 None:intergenic 35.0%
CCTTACTACAAAAAGGCAAA+TGG - chr4.2:89989156-89989175 None:intergenic 35.0%
CTCTACTAAGGGATAATCAA+AGG - chr4.2:89989188-89989207 None:intergenic 35.0%
CTGACATATCAGAGTTTGAT+TGG + chr4.2:89992135-89992154 MS.gene75351:CDS 35.0%
CTTTGATTATCCCTTAGTAG+AGG + chr4.2:89989186-89989205 MS.gene75351:CDS 35.0%
GACATATCAGAGTTTGATTG+GGG + chr4.2:89992137-89992156 MS.gene75351:CDS 35.0%
GAGAAAGCAAATTGAAACTG+TGG - chr4.2:89988776-89988795 None:intergenic 35.0%
GTGCTGTATTATGAACTCTT+GGG + chr4.2:89989730-89989749 MS.gene75351:intron 35.0%
GTTACCTTGAATTTGGTACT+AGG + chr4.2:89991118-89991137 MS.gene75351:intron 35.0%
GTTCAACATTGGGTAGAAAT+TGG + chr4.2:89991266-89991285 MS.gene75351:intron 35.0%
TAAGGGATAATCAAAGGAAG+AGG - chr4.2:89989182-89989201 None:intergenic 35.0%
TAAGTTCTTTGAGTCAAAGC+GGG - chr4.2:89990094-89990113 None:intergenic 35.0%
TAATCAATATCATCTGGGAG+AGG - chr4.2:89989313-89989332 None:intergenic 35.0%
TAATGAATGGGAAGAAATCG+TGG + chr4.2:89989123-89989142 MS.gene75351:CDS 35.0%
TATATATGGAATCCATCCAC+CGG + chr4.2:89988965-89988984 MS.gene75351:intron 35.0%
TATTTGTCTATGAAATCCGG+TGG - chr4.2:89988984-89989003 None:intergenic 35.0%
TCAAATCCGTTTCTAAGTCA+TGG + chr4.2:89988657-89988676 MS.gene75351:intron 35.0%
TCAAGTGGAAGAAATATCGA+TGG + chr4.2:89992481-89992500 MS.gene75351:CDS 35.0%
TCGTGAATCTTTGCAATAGT+TGG - chr4.2:89989596-89989615 None:intergenic 35.0%
TCTAAAAGGTAACCCCATAT+AGG - chr4.2:89990997-89991016 None:intergenic 35.0%
TGGTAACCTCATTAGGATTT+GGG - chr4.2:89988618-89988637 None:intergenic 35.0%
TGGTAAGTGGTAAATTAGTC+TGG + chr4.2:89990035-89990054 MS.gene75351:intron 35.0%
TGTGCTGTATTATGAACTCT+TGG + chr4.2:89989729-89989748 MS.gene75351:intron 35.0%
TTAAACTGAAACTCCTTCAG+AGG + chr4.2:89992292-89992311 MS.gene75351:intron 35.0%
TTCTCAAAAAGTTGTTCTGC+CGG - chr4.2:89992512-89992531 None:intergenic 35.0%
TTGGTGAGATATGATGACAA+AGG + chr4.2:89989553-89989572 MS.gene75351:CDS 35.0%
! AAAACGATCTCAGGTTTTCT+TGG - chr4.2:89992041-89992060 None:intergenic 35.0%
! AAAATCATCTGGTTCAGAGT+AGG + chr4.2:89992256-89992275 MS.gene75351:intron 35.0%
! ACGAGTATACGGTTGATATA+TGG + chr4.2:89989395-89989414 MS.gene75351:CDS 35.0%
! ACTTGATGCTTTTCCAATTG+CGG - chr4.2:89992467-89992486 None:intergenic 35.0%
! ACTTTTTGTGCAACATACAG+GGG - chr4.2:89989500-89989519 None:intergenic 35.0%
! AGAAGACTTTCCTTTTTCCT+TGG - chr4.2:89992321-89992340 None:intergenic 35.0%
! ATTCTGGAAGTGGAAAACTA+GGG - chr4.2:89988877-89988896 None:intergenic 35.0%
! CCATTTGCCTTTTTGTAGTA+AGG + chr4.2:89989153-89989172 MS.gene75351:CDS 35.0%
! CGAGTATACGGTTGATATAT+GGG + chr4.2:89989396-89989415 MS.gene75351:CDS 35.0%
! GATTTTCGACTACGTTTCTT+CGG - chr4.2:89992242-89992261 None:intergenic 35.0%
! GTCTGTTTGCTTGTTCTTTT+TGG + chr4.2:89991331-89991350 MS.gene75351:intron 35.0%
! TAGAAAATGTTATTTGCCGG+TGG - chr4.2:89991659-89991678 None:intergenic 35.0%
! TCAAAATGAGATTCTGGAAG+TGG - chr4.2:89988887-89988906 None:intergenic 35.0%
! TTGGTGTTCCTTTCTTCTTA+GGG - chr4.2:89992022-89992041 None:intergenic 35.0%
!! CACTTTTTGTGCAACATACA+GGG - chr4.2:89989501-89989520 None:intergenic 35.0%
!! GTTTCTAGGGTTTACCTAAA+TGG + chr4.2:89990869-89990888 MS.gene75351:intron 35.0%
!! GTTTGCTTTTCATCACTTTC+TGG - chr4.2:89992854-89992873 None:intergenic 35.0%
!! TCTTTTGGAGATTGTGTCTT+AGG + chr4.2:89991369-89991388 MS.gene75351:intron 35.0%
!! TTCTAGGGTTTACCTAAATG+GGG + chr4.2:89990871-89990890 MS.gene75351:intron 35.0%
!!! AGTGGTGGATTTTGTTTCTA+GGG + chr4.2:89990856-89990875 MS.gene75351:intron 35.0%
!!! GTTTCTAGGGTTTTCCTATA+TGG + chr4.2:89990980-89990999 MS.gene75351:intron 35.0%
!!! TAGTGGTGGATTTTGTTTCT+AGG + chr4.2:89990855-89990874 MS.gene75351:intron 35.0%
!!! TGGGGTTACCTTTTAGAATT+TGG + chr4.2:89991000-89991019 MS.gene75351:intron 35.0%
!!! TTCTAGGGTTTTCCTATATG+GGG + chr4.2:89990982-89991001 MS.gene75351:intron 35.0%
!!! TTTCTAGGGTTTTCCTGAAA+GGG + chr4.2:89991095-89991114 MS.gene75351:intron 35.0%
AACAGAAAAGCGAAATCACG+AGG - chr4.2:89991754-89991773 None:intergenic 40.0%
AACAGATTGCGTTACTGGAT+TGG + chr4.2:89989534-89989553 MS.gene75351:CDS 40.0%
AATTCAAGGTAACCCCTTTC+AGG - chr4.2:89991111-89991130 None:intergenic 40.0%
ACAAGCAAACAGACCACAAA+TGG - chr4.2:89991325-89991344 None:intergenic 40.0%
ACAGATGTTTCTTCCACTTG+AGG - chr4.2:89992623-89992642 None:intergenic 40.0%
ACCAGTTTCTTCCAATTGGA+AGG - chr4.2:89990255-89990274 None:intergenic 40.0%
AGAAACATCTGTGGTTGAAC+CGG + chr4.2:89992631-89992650 MS.gene75351:CDS 40.0%
AGAGGAAGAACCAGTTGAAT+TGG + chr4.2:89992706-89992725 MS.gene75351:CDS 40.0%
AGCTCAATACAGAAAGATGC+AGG - chr4.2:89991478-89991497 None:intergenic 40.0%
AGTGGAAGAAATATCGATGG+CGG + chr4.2:89992484-89992503 MS.gene75351:CDS 40.0%
AGTTACAAGCAGGAGAAATC+CGG + chr4.2:89992755-89992774 MS.gene75351:CDS 40.0%
ATATGTCAGGATTCCCAGAA+TGG - chr4.2:89992124-89992143 None:intergenic 40.0%
ATTGACGTTATCAGCATCAC+TGG - chr4.2:89992366-89992385 None:intergenic 40.0%
CAGTTCTTCCCTAAGAAGAA+AGG + chr4.2:89992011-89992030 MS.gene75351:intron 40.0%
CATGTCAGTTTCACTAGCTA+TGG - chr4.2:89991571-89991590 None:intergenic 40.0%
CCTGTATGTTGCACAAAAAG+TGG + chr4.2:89989499-89989518 MS.gene75351:CDS 40.0%
CTCACTCAGAGCTAATGAAT+GGG + chr4.2:89989111-89989130 MS.gene75351:intron 40.0%
CTGGTAACCTCATTAGGATT+TGG - chr4.2:89988619-89988638 None:intergenic 40.0%
CTGTATTATGAACTCTTGGG+TGG + chr4.2:89989733-89989752 MS.gene75351:intron 40.0%
CTGTTGTAAATATGTTGCCC+CGG + chr4.2:89991769-89991788 MS.gene75351:intron 40.0%
GAAAGGGGTTACCTTGAATT+TGG + chr4.2:89991111-89991130 MS.gene75351:intron 40.0%
GAACTTATCTCTTCTCCAGT+TGG - chr4.2:89992071-89992090 None:intergenic 40.0%
GATTCCCAGAATGGTTATTC+AGG - chr4.2:89992115-89992134 None:intergenic 40.0%
TCAAGTGGAAGAAACATCTG+TGG + chr4.2:89992622-89992641 MS.gene75351:CDS 40.0%
TCCTTCCAATTGGAAGAAAC+TGG + chr4.2:89990251-89990270 MS.gene75351:CDS 40.0%
TCTACTGTATGTTGCGTTCA+CGG + chr4.2:89989909-89989928 MS.gene75351:intron 40.0%
TCTCACTCAGAGCTAATGAA+TGG + chr4.2:89989110-89989129 MS.gene75351:intron 40.0%
TCTTCAATGGAGCTATTCAC+TGG + chr4.2:89989212-89989231 MS.gene75351:CDS 40.0%
TGAATTGGAAAAGCCTCAAG+TGG + chr4.2:89992607-89992626 MS.gene75351:CDS 40.0%
TGAGCTTATGCATGTGTAAC+TGG + chr4.2:89989965-89989984 MS.gene75351:intron 40.0%
TGATCACCCAAATCCTAATG+AGG + chr4.2:89988609-89988628 MS.gene75351:CDS 40.0%
TGATTATCCCTTAGTAGAGG+CGG + chr4.2:89989189-89989208 MS.gene75351:CDS 40.0%
TGTATGCTGCATTCAATGCT+TGG + chr4.2:89990000-89990019 MS.gene75351:intron 40.0%
TGTGAAACATTTGGAGGGAA+AGG - chr4.2:89989007-89989026 None:intergenic 40.0%
TTGACGTTATCAGCATCACT+GGG - chr4.2:89992365-89992384 None:intergenic 40.0%
! AGCTGCCAATTTTCCATTTG+TGG + chr4.2:89991309-89991328 MS.gene75351:intron 40.0%
! GATTCTGGAAGTGGAAAACT+AGG - chr4.2:89988878-89988897 None:intergenic 40.0%
! TCAACTGGTTCTTCCTCTTT+GGG - chr4.2:89992704-89992723 None:intergenic 40.0%
! TCTAAGTCTATGGGTTATGG+TGG + chr4.2:89989372-89989391 MS.gene75351:CDS 40.0%
! TTCAACTGGTTCTTCCTCTT+TGG - chr4.2:89992705-89992724 None:intergenic 40.0%
! TTCACGAAATGGATTCCGAT+TGG + chr4.2:89989609-89989628 MS.gene75351:CDS 40.0%
!! CTTGGTGTTCCTTTCTTCTT+AGG - chr4.2:89992023-89992042 None:intergenic 40.0%
!! GCAATTGGAAAAGCATCAAG+TGG + chr4.2:89992466-89992485 MS.gene75351:CDS 40.0%
!! TGGGGCTAGATTTTGTTTCT+AGG + chr4.2:89990966-89990985 MS.gene75351:intron 40.0%
!! TTACGAGGTATTGAATCAGC+TGG - chr4.2:89989782-89989801 None:intergenic 40.0%
!!! CCACTTTTTGTGCAACATAC+AGG - chr4.2:89989502-89989521 None:intergenic 40.0%
!!! GGGGCTAGATTTTGTTTCTA+GGG + chr4.2:89990967-89990986 MS.gene75351:intron 40.0%
!!! GTTTCTAGGGTTTTCCTGAA+AGG + chr4.2:89991094-89991113 MS.gene75351:intron 40.0%
!!! TTCTAGGGTTTTCCTGAAAG+GGG + chr4.2:89991096-89991115 MS.gene75351:intron 40.0%
AACTCTCTGCTCCTTCCAAT+TGG + chr4.2:89990241-89990260 MS.gene75351:CDS 45.0%
ACACAGGGCACAGAAAAAAG+TGG - chr4.2:89991419-89991438 None:intergenic 45.0%
AGCTGATAGCAGTTACAAGC+AGG + chr4.2:89992745-89992764 MS.gene75351:CDS 45.0%
AGTCTTTGCTTTCACTCCCA+TGG + chr4.2:89989644-89989663 MS.gene75351:CDS 45.0%
ATTGAAGACCGCCTCTACTA+AGG - chr4.2:89989200-89989219 None:intergenic 45.0%
CAATGGAGCTATTCACTGGT+TGG + chr4.2:89989216-89989235 MS.gene75351:CDS 45.0%
CTTCTTAGGGAAGAACTGCA+TGG - chr4.2:89992009-89992028 None:intergenic 45.0%
GAGGCAGCCTTACTACAAAA+AGG - chr4.2:89989163-89989182 None:intergenic 45.0%
GCTCTACTTGTTTGTGCCAT+GGG - chr4.2:89989663-89989682 None:intergenic 45.0%
GTTGGAACAGATTGCGTTAC+TGG + chr4.2:89989529-89989548 MS.gene75351:CDS 45.0%
TACAGGGGAAACACCATCAA+TGG - chr4.2:89989485-89989504 None:intergenic 45.0%
TCAGAGGAAGCCAAGGAAAA+AGG + chr4.2:89992308-89992327 MS.gene75351:intron 45.0%
TCCACAGAAAGTTGTTCCAC+CGG - chr4.2:89992653-89992672 None:intergenic 45.0%
TGCTCTACTTGTTTGTGCCA+TGG - chr4.2:89989664-89989683 None:intergenic 45.0%
TGGTTCAGAGTAGGATGACA+AGG + chr4.2:89992265-89992284 MS.gene75351:intron 45.0%
TGTCACTGAAAAGCCGCAAT+TGG + chr4.2:89992451-89992470 MS.gene75351:CDS 45.0%
TGTCGCTGAAAAACCCAAAG+AGG + chr4.2:89992688-89992707 MS.gene75351:CDS 45.0%
TGTCTATGAAATCCGGTGGA+TGG - chr4.2:89988980-89988999 None:intergenic 45.0%
TTAGTAGAGGCGGTCTTCAA+TGG + chr4.2:89989199-89989218 MS.gene75351:CDS 45.0%
TTGAAGACCGCCTCTACTAA+GGG - chr4.2:89989199-89989218 None:intergenic 45.0%
TTTCGACTACGTTTCTTCGG+AGG - chr4.2:89992239-89992258 None:intergenic 45.0%
! ATCGTTTTCGTTGCTCCAAC+TGG + chr4.2:89992053-89992072 MS.gene75351:CDS 45.0%
! CTAATCCTTGATGATCGCCT+TGG - chr4.2:89992176-89992195 None:intergenic 45.0%
! TCTAGGAGTGTGTGTTGAAG+AGG - chr4.2:89988732-89988751 None:intergenic 45.0%
! TTTTCCTTGGCTTCCTCTGA+AGG - chr4.2:89992308-89992327 None:intergenic 45.0%
!! AGAAATATCGATGGCGGAAC+CGG + chr4.2:89992490-89992509 MS.gene75351:CDS 45.0%
!! GGTTATGGTGGACGAGTATA+CGG + chr4.2:89989384-89989403 MS.gene75351:CDS 45.0%
!! AATTCATAAATTAAAAAAAA+TGG - chr4.2:89990340-89990359 None:intergenic 5.0%
AACATCTGTGGTTGAACCGG+TGG + chr4.2:89992634-89992653 MS.gene75351:CDS 50.0%
AACTCCTTCAGAGGAAGCCA+AGG + chr4.2:89992301-89992320 MS.gene75351:intron 50.0%
ACCGGTGGAACAACTTTCTG+TGG + chr4.2:89992649-89992668 MS.gene75351:CDS 50.0%
AGACACCAAGGCGATCATCA+AGG + chr4.2:89992168-89992187 MS.gene75351:CDS 50.0%
ATATTGAACTGGGGGGTTCG+AGG + chr4.2:89991798-89991817 MS.gene75351:intron 50.0%
CCCAGTTCAATATGGAGTGC+CGG - chr4.2:89991791-89991810 None:intergenic 50.0%
CCGGCACTCCATATTGAACT+GGG + chr4.2:89991788-89991807 MS.gene75351:intron 50.0%
CGGCACTCCATATTGAACTG+GGG + chr4.2:89991789-89991808 MS.gene75351:intron 50.0%
GCACTCCATATTGAACTGGG+GGG + chr4.2:89991791-89991810 MS.gene75351:intron 50.0%
GGAGCAACGAAAACGATCTC+AGG - chr4.2:89992050-89992069 None:intergenic 50.0%
GGCACTCCATATTGAACTGG+GGG + chr4.2:89991790-89991809 MS.gene75351:intron 50.0%
TCGAACCCCCCAGTTCAATA+TGG - chr4.2:89991799-89991818 None:intergenic 50.0%
! CCAGTTCAATATGGAGTGCC+GGG - chr4.2:89991790-89991809 None:intergenic 50.0%
!! CAGTTCAATATGGAGTGCCG+GGG - chr4.2:89991789-89991808 None:intergenic 50.0%
!! TGATGATCGCCTTGGTGTCT+TGG - chr4.2:89992168-89992187 None:intergenic 50.0%
CCCGGCACTCCATATTGAAC+TGG + chr4.2:89991787-89991806 MS.gene75351:intron 55.0%
! TCCTTCGTTTTCCTCTGCGC+CGG - chr4.2:89992777-89992796 None:intergenic 55.0%
!! TGATCGCCTTGGTGTCTTGG+CGG - chr4.2:89992165-89992184 None:intergenic 55.0%
!!! TGCAGGTGGTGGGGTTGTTT+TGG - chr4.2:89992207-89992226 None:intergenic 55.0%
CTCAGCTTGTGCAGGTGGTG+GGG - chr4.2:89992216-89992235 None:intergenic 60.0%
GCTCAGCTTGTGCAGGTGGT+GGG - chr4.2:89992217-89992236 None:intergenic 60.0%
TCCGGCGCAGAGGAAAACGA+AGG + chr4.2:89992773-89992792 MS.gene75351:CDS 60.0%
TTCGGAGGCTCAGCTTGTGC+AGG - chr4.2:89992224-89992243 None:intergenic 60.0%
!! AGGGGAGGCACCAGTTGAGT+TGG + chr4.2:89992565-89992584 MS.gene75351:CDS 60.0%
GCAGGAGAAATCCGGCGCAG+AGG + chr4.2:89992763-89992782 MS.gene75351:CDS 65.0%
GGAGGCTCAGCTTGTGCAGG+TGG - chr4.2:89992221-89992240 None:intergenic 65.0%
GGCTCAGCTTGTGCAGGTGG+TGG - chr4.2:89992218-89992237 None:intergenic 65.0%
GGGGAACCGCCAAGACACCA+AGG + chr4.2:89992156-89992175 MS.gene75351:CDS 65.0%
! GGAGCTTATGGCGGAGGTGG+CGG + chr4.2:89988565-89988584 MS.gene75351:CDS 65.0%
!! GGAGGTGGCGGAGCTTATGG+CGG + chr4.2:89988556-89988575 MS.gene75351:CDS 65.0%
! GGCGGAGCTTATGGCGGAGG+TGG + chr4.2:89988562-89988581 MS.gene75351:CDS 70.0%
!! GGCGGAGGTGGCGGAGCTTA+TGG + chr4.2:89988553-89988572 MS.gene75351:CDS 70.0%
!! GGTGGCGGAGCTTATGGCGG+AGG + chr4.2:89988559-89988578 MS.gene75351:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 89988551 89992943 89988551 ID=MS.gene75351
chr4.2 mRNA 89988551 89992943 89988551 ID=MS.gene75351.t1;Parent=MS.gene75351
chr4.2 exon 89988551 89988630 89988551 ID=MS.gene75351.t1.exon1;Parent=MS.gene75351.t1
chr4.2 CDS 89988551 89988630 89988551 ID=cds.MS.gene75351.t1;Parent=MS.gene75351.t1
chr4.2 exon 89989120 89989684 89989120 ID=MS.gene75351.t1.exon2;Parent=MS.gene75351.t1
chr4.2 CDS 89989120 89989684 89989120 ID=cds.MS.gene75351.t1;Parent=MS.gene75351.t1
chr4.2 exon 89990201 89990272 89990201 ID=MS.gene75351.t1.exon3;Parent=MS.gene75351.t1
chr4.2 CDS 89990201 89990272 89990201 ID=cds.MS.gene75351.t1;Parent=MS.gene75351.t1
chr4.2 exon 89992014 89992266 89992014 ID=MS.gene75351.t1.exon4;Parent=MS.gene75351.t1
chr4.2 CDS 89992014 89992266 89992014 ID=cds.MS.gene75351.t1;Parent=MS.gene75351.t1
chr4.2 exon 89992312 89992943 89992312 ID=MS.gene75351.t1.exon5;Parent=MS.gene75351.t1
chr4.2 CDS 89992312 89992943 89992312 ID=cds.MS.gene75351.t1;Parent=MS.gene75351.t1
Gene Sequence

>MS.gene75351

ATGGCGGAGGTGGCGGAGCTTATGGCGGAGGTGGCGGAACCGTATCTGCCTGATGAATTGATCACCCAAATCCTAATGAGGTTACCAGTTAAGTCTCTTATTCGTTTCAAATCCGTTTCTAAGTCATGGTTTTCTGTTATCTCTGATAATCACTTTGCAAATTCACATTTTCAACTTACCTCTTCAACACACACTCCTAGAATTCTCTTCTTAACAGTAAATCCACAGTTTCAATTTGCTTTCTCAAACACTACTCCTGAATTTCGATCTATAGATTTACCGTCATTGTTTACCGATGATTATAATGAACCTGTTACACTAAACCCTAGTTTTCCACTTCCAGAATCTCATTTTGATATTCAATTTAAAGGTTCATGTAGAGGGTTTATACTTTTGCACATTTGTTTAAACGCTTATATATGGAATCCATCCACCGGATTTCATAGACAAATACCTTTCCCTCCAAATGTTTCACATTTAAGTTTCTATGGTTTTGGGTATGACGAATCAAAAGATGATTACTTGGTGGTTTCAGTTTTGTATGATTACTTGGGGATTTTCTCACTCAGAGCTAATGAATGGGAAGAAATCGTGGATGCTGTCCATTTGCCTTTTTGTAGTAAGGCTGCCTCTTCCTTTGATTATCCCTTAGTAGAGGCGGTCTTCAATGGAGCTATTCACTGGTTGGCTTTTTGTTGTGATACTCGTGAATATATTATTGTTGCCTTTGATTTAATGGAAAGGAAACTTGTAGAGATTCCTCTCCCAGATGATATTGATTATCGTTCTACGGATTTTGATTTATGGGTATTTAGAGGATTTCTAAGTCTATGGGTTATGGTGGACGAGTATACGGTTGATATATGGGTAATGAAAGAATACAAAGTGCAGTCATCTTGGACTAAAACTCTTGTTCTTACTACTGATGATACCATTGATGGTGTTTCCCCTGTATGTTGCACAAAAAGTGGTGATATTGTTGGAACAGATTGCGTTACTGGATTGGTGAGATATGATGACAAAGGAGAGTTTTTAGAGCATACCAACTATTGCAAAGATTCACGAAATGGATTCCGATTGGCTATGTATACAGAGTCTTTGCTTTCACTCCCATGGCACAAACAAGTAGAGCAAGTTAGTTATATTTTCTCCTTCACCATTTTCTAGATATTTATAATTGTGCTGTATTATGAACTCTTGGGTGGCCGAAATTTATAACATGAGCACACCAGCTGATTCAATACCTCGTAAAATGTTTATGTTTTTTTGGTTAACTATTTGTAATATGTTTATTGGAAATATTGACAACTTTGTTTGTGTGATTCACCGTTATTTATGCATATGTATCTGGATTATGTTCTACTGTATGTTGCGTTCACGGCTTGAAATTGTTCTACGTCGTAAATTAGTCTGATGAGCTTATGCATGTGTAACTGGATTCTGTTTTAATGTATGCTGCATTCAATGCTTGGAATTGTTTTATATGGTAAGTGGTAAATTAGTCTGGTTAGTTTATGCATGTTGATTAAGATCACAACTACCCGCTTTGACTCAAAGAACTTATTTAAAAGTTTATTCATACTTGATGGTATTTAAAAATATAGTTTAATTTCTTGATTTTTATGCTGTTCAATTGTTCATATTTTATAGGGTTTTTGTTTTTCTTCTTCTGCTGAAGTCTTGTCTGTTGAACTCTCTGCTCCTTCCAATTGGAAGAAACTGGTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTTTTTTTAATTTATGAATTTATAATATGTAGTTTTTTTCTTGAATATCTTGTTTTTTATGCAGCTCAGATTTTTAGGGTTTTTTTTTTCTCTTTTCAATTTCCTTGATTTTTTTTATGTGATTTTTCCTTTGATTTTTTTTATTAGCTTCATGATTATAAATTTAATTTCTTGAATATCTTGAATTTTATGCAGCTCAGTTTTTTAGAGTTTTTTCTTTCAATTTCATTGATTTTTTTAATATGATTTTTTCTTTATTTTTTATTATTAGCTTTATGATTATGAATTTAATTTCTTGATTTTTATGCTATTCAATTGTTCATTTTTTTAGGGTTTTTGTTTTCTTTCAATTTTCTTGATTTTCATTATGACAGTTATTGTTATTTGTTACTGTGGATTGATATCTCACTTTCATTGTCTGAAATTCTGTTAATTAATTAACTTTTTTTTTTTGAAGGAATTTATTGATATGAATTCTGTTAATTGATTATATTTTTGTAATGTTATGAAGAATTTAGTGGTGGATTTTGTTTCTAGGGTTTACCTAAATGGGGTTTAATTTACAGAATTTGGTACTAGATTTTGTTTCTAGGGTTTTCTTGAAATTACTTGTAAAAAAACAGAATTGGGGCTAGATTTTGTTTCTAGGGTTTTCCTATATGGGGTTACCTTTTAGAATTTGGTACTAGGTTTCAATTTTAGGGTTTTCTTGAAATTAGTGCTCATGATTTTAAGCAATTTAGTGCTAAATTTTGTTTCTAGGGTTTTCCTGAAAGGGGTTACCTTGAATTTGGTACTAGGTTTTGTTTCTAGTATTTTCTTGAAATTACTTAAGTTAGGATTTTGAAGTTTTTGTTTTTTGGGTTCTGCTACCTTGTAAAGTTTTGATTTGTTTTTTATTTTTTGTTTTTGTGGGAATCTAAGATGTTCAACATTGGGTAGAAATTGGTTTTTAACAAGGATGATAAAAGCTGCCAATTTTCCATTTGTGGTCTGTTTGCTTGTTCTTTTTGGGCTTTATTGATGTTGTCTTTTGGAGATTGTGTCTTAGGTTTTAATAGCAAAAAATTTCACTTCCACTTTTTTCTGTGCCCTGTGTGATTCAGATAATTTTTGTGCAAGATTCTGTTCCATTCCTGCATCTTTCTGTATTGAGCTTATTTTGATTTTGTGATTTTCCCTGCTTTGCACTTTGATTTTATCCAAAATGGATTCTGGTTTGTAACTTCCATAGCTAGTGAAACTGACATGAAGTATGCTATAGATCAATTTGTGAATAAGTGCTTCAGAATGTTATATTTTTTGGTGAAAATTATCCACCGGCAAATAACATTTTCTAAACTATTCTAGGCTAGAGCATTTTGTGAACTGTAGTGCTTACTGTTTAGTGATTTATTGGTGTTGATTAGGTCCTCGTGATTTCGCTTTTCTGTTGTAAATATGTTGCCCCGGCACTCCATATTGAACTGGGGGGTTCGAGGTTTAACATTACACTACACATGTGATTTTTTGTCATTGTCATGTCTGATGTTTGTATGTGTTAATGTTGCTTATTGGTTCTTGAATTCAATTAACAATGTGACTGTTGCTAACATGTTTATATTGGTGTTCCTTTTAGTTGTATGCTTTATTATGGAAATTGTTTTATAACGTATTTTTGGTTTCACCATGCAGTTCTTCCCTAAGAAGAAAGGAACACCAAGAAAACCTGAGATCGTTTTCGTTGCTCCAACTGGAGAAGAGATAAGTTCCAAAAGACAATTGAAGAAGTACCTGAATAACCATTCTGGGAATCCTGACATATCAGAGTTTGATTGGGGAACCGCCAAGACACCAAGGCGATCATCAAGGATTAGAGAGATTGCCAAAACAACCCCACCACCTGCACAAGCTGAGCCTCCGAAGAAACGTAGTCGAAAATCATCTGGTTCAGAGTAGGATGACAAGGATGCTTAAACTGAAACTCCTTCAGAGGAAGCCAAGGAAAAAGGAAAGTCTTCTGCTGAAGAACTGAAAGCTGATCCCAGTGATGCTGATAACGTCAATGATGAAATAAAGATTGACGATGCAGAGGTAATTAAACAAAGTAATGTGGAAGATTCGAATGCATCTGTCACTGAAAAGCCGCAATTGGAAAAGCATCAAGTGGAAGAAATATCGATGGCGGAACCGGCAGAACAACTTTTTGAGAAATCTTTGGATGCTGTTGTTGCTGAAAAACTATCAGGGGAGGCACCAGTTGAGTTGGAAAAAGAAAATAGTAAAGCTGAATTGGAAAAGCCTCAAGTGGAAGAAACATCTGTGGTTGAACCGGTGGAACAACTTTCTGTGGAAGCTTTGAACGCTGTTGTCGCTGAAAAACCCAAAGAGGAAGAACCAGTTGAATTGGAAAAGGAAAATGGTACAGCTGATAGCAGTTACAAGCAGGAGAAATCCGGCGCAGAGGAAAACGAAGGAGCTGAGAAAGTGAGTCTCAATGTTGAAGATATCATTAATGGTAAGAATGAAATTCCAGAAAGTGATGAAAAGCAAACAATTCAAGGTGATGAACAAGTGAAGAAAATGGTTGATAATGAAAGTGTTATTTGGAGCTTTGCTCAATGA
Protein sequence

>MS.gene75351.t1

MAEVAELMAEVAEPYLPDELITQILMRANEWEEIVDAVHLPFCSKAASSFDYPLVEAVFNGAIHWLAFCCDTREYIIVAFDLMERKLVEIPLPDDIDYRSTDFDLWVFRGFLSLWVMVDEYTVDIWVMKEYKVQSSWTKTLVLTTDDTIDGVSPVCCTKSGDIVGTDCVTGLVRYDDKGEFLEHTNYCKDSRNGFRLAMYTESLLSLPWHKQVEQGFCFSSSAEVLSVELSAPSNWKKLFFPKKKGTPRKPEIVFVAPTGEEISSKRQLKKYLNNHSGNPDISEFDWGTAKTPRRSSRIREIAKTTPPPAQAEPPKKRSRKSSEEAKEKGKSSAEELKADPSDADNVNDEIKIDDAEVIKQSNVEDSNASVTEKPQLEKHQVEEISMAEPAEQLFEKSLDAVVAEKLSGEAPVELEKENSKAELEKPQVEETSVVEPVEQLSVEALNAVVAEKPKEEEPVELEKENGTADSSYKQEKSGAEENEGAEKVSLNVEDIINGKNEIPESDEKQTIQGDEQVKKMVDNESVIWSFAQ