Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76856.t1 | XP_003614055.2 | 98.3 | 409 | 7 | 0 | 1 | 409 | 1 | 409 | 7.20E-219 | 769.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76856.t1 | P11869 | 81.4 | 318 | 59 | 0 | 85 | 402 | 83 | 400 | 1.4e-146 | 520.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76856.t1 | G7JWT8 | 98.3 | 409 | 7 | 0 | 1 | 409 | 1 | 409 | 5.2e-219 | 769.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene76856 | -0.808833 | 2.55E-50 | -1.69E-46 |
| MS.gene04932 | MS.gene76856 | 0.808678 | 2.75E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene76856 | 0.813249 | 2.82E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene76856 | 0.813561 | 2.40E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene76856 | -0.801786 | 7.64E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene76856 | 0.816472 | 5.43E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene76856 | -0.804041 | 2.61E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene76856 | -0.801582 | 8.41E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene76856 | -0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene76856 | -0.811138 | 8.13E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene76856 | 0.819271 | 1.27E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene76856 | 0.804226 | 2.39E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene76856 | 0.821143 | 4.72E-53 | -1.69E-46 |
| MS.gene051651 | MS.gene76856 | 0.827065 | 1.92E-54 | -1.69E-46 |
| MS.gene051863 | MS.gene76856 | 0.822734 | 2.02E-53 | -1.69E-46 |
| MS.gene052129 | MS.gene76856 | 0.811435 | 7.01E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene76856 | 0.823215 | 1.56E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene76856 | -0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene76856 | 0.822025 | 2.95E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene76856 | -0.815125 | 1.08E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene76856 | 0.823146 | 1.62E-53 | -1.69E-46 |
| MS.gene054884 | MS.gene76856 | 0.815878 | 7.38E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene76856 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene76856 | -0.802126 | 6.51E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene76856 | -0.809711 | 1.65E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene76856 | -0.809683 | 1.68E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene76856 | -0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene056224 | MS.gene76856 | 0.828229 | 1.01E-54 | -1.69E-46 |
| MS.gene056387 | MS.gene76856 | -0.816315 | 5.89E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene76856 | -0.813313 | 2.73E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene76856 | 0.808855 | 2.52E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene76856 | 0.8071 | 5.96E-50 | -1.69E-46 |
| MS.gene056688 | MS.gene76856 | 0.834582 | 2.76E-56 | -1.69E-46 |
| MS.gene056694 | MS.gene76856 | 0.831848 | 1.32E-55 | -1.69E-46 |
| MS.gene056697 | MS.gene76856 | 0.850348 | 1.80E-60 | -1.69E-46 |
| MS.gene056856 | MS.gene76856 | 0.831638 | 1.49E-55 | -1.69E-46 |
| MS.gene056920 | MS.gene76856 | 0.812076 | 5.08E-51 | -1.69E-46 |
| MS.gene057261 | MS.gene76856 | 0.811766 | 5.94E-51 | -1.69E-46 |
| MS.gene057717 | MS.gene76856 | 0.817709 | 2.87E-52 | -1.69E-46 |
| MS.gene057768 | MS.gene76856 | 0.824564 | 7.54E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene76856 | 0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene058382 | MS.gene76856 | 0.804844 | 1.78E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene76856 | 0.805593 | 1.24E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene76856 | -0.809952 | 1.47E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene76856 | 0.810526 | 1.10E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene76856 | -0.808427 | 3.11E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene76856 | 0.838044 | 3.63E-57 | -1.69E-46 |
| MS.gene059699 | MS.gene76856 | 0.804862 | 1.76E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene76856 | 0.805426 | 1.34E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene76856 | 0.82431 | 8.65E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene76856 | -0.813643 | 2.31E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene76856 | 0.86141 | 1.05E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene76856 | -0.814557 | 1.45E-51 | -1.69E-46 |
| MS.gene061044 | MS.gene76856 | 0.80012 | 1.67E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76856.t1 | MTR_5g044220 | 98.289 | 409 | 7 | 0 | 1 | 409 | 1 | 409 | 0.0 | 816 |
| MS.gene76856.t1 | MTR_4g088350 | 76.554 | 354 | 72 | 4 | 53 | 406 | 59 | 401 | 0.0 | 543 |
| MS.gene76856.t1 | MTR_4g088350 | 81.884 | 276 | 50 | 0 | 131 | 406 | 15 | 290 | 2.32e-167 | 471 |
| MS.gene76856.t1 | MTR_3g049400 | 36.939 | 379 | 220 | 6 | 23 | 393 | 33 | 400 | 3.59e-74 | 237 |
| MS.gene76856.t1 | MTR_2g022700 | 39.710 | 345 | 189 | 5 | 59 | 395 | 63 | 396 | 1.59e-73 | 235 |
| MS.gene76856.t1 | MTR_2g029180 | 40.606 | 330 | 176 | 8 | 68 | 390 | 75 | 391 | 1.06e-66 | 218 |
| MS.gene76856.t1 | MTR_4g131800 | 38.701 | 354 | 185 | 6 | 65 | 393 | 68 | 414 | 7.61e-63 | 218 |
| MS.gene76856.t1 | MTR_4g105630 | 37.748 | 302 | 176 | 3 | 99 | 393 | 80 | 376 | 6.77e-59 | 197 |
| MS.gene76856.t1 | MTR_3g077640 | 36.471 | 340 | 198 | 4 | 68 | 403 | 85 | 410 | 1.27e-57 | 194 |
| MS.gene76856.t1 | MTR_6g005480 | 36.888 | 347 | 198 | 7 | 65 | 404 | 86 | 418 | 1.67e-57 | 194 |
| MS.gene76856.t1 | MTR_4g105630 | 36.986 | 292 | 172 | 3 | 99 | 383 | 80 | 366 | 6.79e-55 | 186 |
| MS.gene76856.t1 | MTR_4g105630 | 37.220 | 223 | 132 | 2 | 99 | 313 | 80 | 302 | 2.54e-41 | 149 |
| MS.gene76856.t1 | MTR_4g105630 | 39.216 | 204 | 120 | 1 | 99 | 298 | 80 | 283 | 2.92e-40 | 147 |
| MS.gene76856.t1 | MTR_1g030320 | 25.084 | 299 | 206 | 6 | 111 | 399 | 21 | 311 | 2.96e-20 | 91.7 |
| MS.gene76856.t1 | MTR_3g072380 | 25.253 | 297 | 208 | 5 | 111 | 399 | 22 | 312 | 6.91e-20 | 90.5 |
| MS.gene76856.t1 | MTR_3g462070 | 27.869 | 305 | 190 | 11 | 111 | 401 | 17 | 305 | 1.00e-15 | 77.8 |
| MS.gene76856.t1 | MTR_4g018760 | 27.937 | 315 | 177 | 13 | 111 | 401 | 20 | 308 | 2.08e-14 | 73.9 |
| MS.gene76856.t1 | MTR_3g070000 | 27.063 | 303 | 195 | 11 | 111 | 401 | 32 | 320 | 2.78e-14 | 73.6 |
| MS.gene76856.t1 | MTR_5g081710 | 28.053 | 303 | 192 | 12 | 111 | 401 | 16 | 304 | 5.53e-14 | 72.8 |
| MS.gene76856.t1 | MTR_3g072380 | 26.519 | 181 | 123 | 4 | 111 | 283 | 22 | 200 | 1.79e-12 | 67.0 |
| MS.gene76856.t1 | MTR_8g090130 | 25.817 | 306 | 198 | 12 | 110 | 402 | 18 | 307 | 3.15e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76856.t1 | AT5G46110 | 76.012 | 346 | 76 | 1 | 61 | 406 | 72 | 410 | 0.0 | 542 |
| MS.gene76856.t1 | AT5G46110 | 76.833 | 341 | 72 | 1 | 61 | 401 | 72 | 405 | 0.0 | 541 |
| MS.gene76856.t1 | AT5G46110 | 82.155 | 297 | 53 | 0 | 110 | 406 | 1 | 297 | 0.0 | 518 |
| MS.gene76856.t1 | AT5G46110 | 73.699 | 346 | 73 | 2 | 61 | 406 | 72 | 399 | 0.0 | 517 |
| MS.gene76856.t1 | AT5G54800 | 40.597 | 335 | 190 | 4 | 64 | 393 | 57 | 387 | 2.14e-76 | 242 |
| MS.gene76856.t1 | AT1G61800 | 40.597 | 335 | 182 | 5 | 65 | 393 | 64 | 387 | 2.95e-72 | 231 |
| MS.gene76856.t1 | AT1G61800 | 40.299 | 335 | 183 | 5 | 65 | 393 | 64 | 387 | 1.05e-71 | 231 |
| MS.gene76856.t1 | AT5G17630 | 35.422 | 415 | 241 | 10 | 1 | 400 | 6 | 408 | 2.90e-70 | 227 |
| MS.gene76856.t1 | AT3G01550 | 39.048 | 315 | 184 | 3 | 83 | 393 | 62 | 372 | 4.21e-58 | 194 |
| MS.gene76856.t1 | AT5G33320 | 35.625 | 320 | 199 | 3 | 88 | 403 | 92 | 408 | 3.45e-52 | 180 |
| MS.gene76856.t1 | AT3G01550 | 37.778 | 315 | 183 | 4 | 83 | 393 | 62 | 367 | 3.59e-52 | 179 |
| MS.gene76856.t1 | AT4G03950 | 34.783 | 299 | 133 | 10 | 105 | 399 | 19 | 259 | 4.94e-35 | 130 |
| MS.gene76856.t1 | AT1G77610 | 25.253 | 297 | 208 | 5 | 111 | 399 | 16 | 306 | 1.94e-19 | 89.0 |
| MS.gene76856.t1 | AT1G21870 | 25.503 | 298 | 208 | 6 | 111 | 400 | 22 | 313 | 2.55e-18 | 85.9 |
| MS.gene76856.t1 | AT3G11320 | 27.152 | 302 | 196 | 10 | 111 | 401 | 18 | 306 | 1.53e-15 | 77.4 |
| MS.gene76856.t1 | AT1G12500 | 25.161 | 310 | 214 | 6 | 100 | 401 | 55 | 354 | 2.43e-14 | 74.3 |
| MS.gene76856.t1 | AT5G05820 | 26.159 | 302 | 201 | 9 | 111 | 402 | 18 | 307 | 1.88e-13 | 71.2 |
Find 74 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTTCCTGCATTGGTTAC+TGG | 0.274557 | 5.2:+34607667 | MS.gene76856:CDS |
| GGCCTAAACCCCAGCTAAAA+AGG | 0.277465 | 5.2:-34608138 | None:intergenic |
| TGCTTTAATCACTGAATAGA+TGG | 0.281415 | 5.2:-34610638 | None:intergenic |
| CTCTTGTTAGCCAATGAATA+AGG | 0.285727 | 5.2:+34608514 | MS.gene76856:intron |
| GTTCTCTCCACTGGTGAAAA+AGG | 0.286676 | 5.2:+34607251 | MS.gene76856:CDS |
| AGGAAAACATACTATGGATA+TGG | 0.302041 | 5.2:-34607969 | None:intergenic |
| GGACCCCAGCTGATGGAGTT+TGG | 0.328318 | 5.2:+34609999 | MS.gene76856:CDS |
| GCCACAGAGACAGGGGAATA+TGG | 0.335625 | 5.2:-34609223 | None:intergenic |
| TCAGCTTCCCAGTTTGTCTT+AGG | 0.336546 | 5.2:+34609197 | MS.gene76856:CDS |
| TTTCTCACCAAAACTCTTTG+AGG | 0.348207 | 5.2:-34607647 | None:intergenic |
| GCAGCTTGCTACTAATACTT+TGG | 0.357987 | 5.2:+34610228 | MS.gene76856:intron |
| GTCCAATCCTCAAAGAGTTT+TGG | 0.368718 | 5.2:+34607640 | MS.gene76856:CDS |
| CTTTGAACTGATATGAGAAC+TGG | 0.370164 | 5.2:-34607117 | None:intergenic |
| TTTCCAACTGCATGTGTTAG+TGG | 0.372398 | 5.2:-34610262 | None:intergenic |
| CACCAAAACTCTTTGAGGAT+TGG | 0.379697 | 5.2:-34607642 | None:intergenic |
| TATGGTGGCCTAAGACAAAC+TGG | 0.380070 | 5.2:-34609205 | None:intergenic |
| TCGGTTGTACATCTCCTTGT+GGG | 0.381167 | 5.2:+34608103 | MS.gene76856:CDS |
| GTTTCAAGTTCAACTAGTTA+TGG | 0.384414 | 5.2:+34607177 | MS.gene76856:CDS |
| AATTCGTTTCAGCTTTGTTT+CGG | 0.388062 | 5.2:+34608084 | MS.gene76856:intron |
| TAACTGAACTGTCTTTCAAT+TGG | 0.389795 | 5.2:+34609460 | MS.gene76856:CDS |
| TCAAAGATAGCCACAGAGAC+AGG | 0.397800 | 5.2:-34609232 | None:intergenic |
| TGTCATTGGATTCTCTATAG+TGG | 0.400424 | 5.2:+34610303 | MS.gene76856:CDS |
| GGTACTGCTATTGCAATTGC+AGG | 0.404609 | 5.2:+34610610 | MS.gene76856:CDS |
| GGATTCTCTATAGTGGTGTT+TGG | 0.406870 | 5.2:+34610310 | MS.gene76856:CDS |
| AACAAGAGCTCCTTATTCAT+TGG | 0.407138 | 5.2:-34608524 | None:intergenic |
| CTGCAGCCCTTACATCTTAA+CGG | 0.410285 | 5.2:+34610787 | MS.gene76856:CDS |
| AATGAACTCACAAGAATTGC+CGG | 0.411112 | 5.2:-34609721 | None:intergenic |
| TTGGATGCTTCTTAGATTGA+AGG | 0.415979 | 5.2:+34609978 | MS.gene76856:intron |
| GGTGAAATTGAAATCTCTAA+TGG | 0.426650 | 5.2:+34607336 | MS.gene76856:CDS |
| AAGCTTGGTGTTCTCTCCAC+TGG | 0.428146 | 5.2:+34607242 | MS.gene76856:CDS |
| AACAAGATATCCACACAAAC+TGG | 0.434241 | 5.2:+34610583 | MS.gene76856:CDS |
| GTGAAATTGAAATCTCTAAT+GGG | 0.435720 | 5.2:+34607337 | MS.gene76856:CDS |
| AGAGCGTCCGTTAAGATGTA+AGG | 0.446459 | 5.2:-34610794 | None:intergenic |
| AAACTTTGTCAGTCCTACTT+TGG | 0.455678 | 5.2:-34610039 | None:intergenic |
| TAAATCCAAACTCCATCAGC+TGG | 0.456322 | 5.2:-34610004 | None:intergenic |
| AGAAATGCTATTGCCAAAGT+AGG | 0.458021 | 5.2:+34610026 | MS.gene76856:CDS |
| GCTGCTAAGGCTGTAACAAC+AGG | 0.458350 | 5.2:-34607300 | None:intergenic |
| AGGGCATGACAAAATGCAAC+TGG | 0.465026 | 5.2:-34608557 | None:intergenic |
| GTATAACTCACTGCACGCTT+TGG | 0.466580 | 5.2:-34608163 | None:intergenic |
| TTCACTGTTAGGTGTATCAA+TGG | 0.468136 | 5.2:+34609431 | MS.gene76856:intron |
| AGGATACCTGATTGTAAAGA+TGG | 0.470401 | 5.2:-34610094 | None:intergenic |
| TGGTGAGAAATTTCCTGCAT+TGG | 0.485539 | 5.2:+34607660 | MS.gene76856:CDS |
| GAACTGTCTTTCAATTGGAC+TGG | 0.491188 | 5.2:+34609465 | MS.gene76856:CDS |
| ATCATCAGCATCTGCTGCTA+AGG | 0.492326 | 5.2:-34607313 | None:intergenic |
| TGAGGCTTTAAATTCAAGCT+TGG | 0.495820 | 5.2:+34607227 | MS.gene76856:CDS |
| CCTTTGGAGTAAAACAAAGA+AGG | 0.503134 | 5.2:+34607274 | MS.gene76856:CDS |
| ATGAACTCACAAGAATTGCC+GGG | 0.526132 | 5.2:-34609720 | None:intergenic |
| TTCGGTTGTACATCTCCTTG+TGG | 0.526578 | 5.2:+34608102 | MS.gene76856:CDS |
| CGGTTGTACATCTCCTTGTG+GGG | 0.527328 | 5.2:+34608104 | MS.gene76856:CDS |
| AAGAAACCAGTAACCAATGC+AGG | 0.530659 | 5.2:-34607673 | None:intergenic |
| GATTGAAGGACCCCAGCTGA+TGG | 0.553456 | 5.2:+34609992 | MS.gene76856:intron |
| CAAAGATAGCCACAGAGACA+GGG | 0.555765 | 5.2:-34609231 | None:intergenic |
| ACCATATTCCCCTGTCTCTG+TGG | 0.557367 | 5.2:+34609222 | MS.gene76856:CDS |
| AAATCCAAACTCCATCAGCT+GGG | 0.573043 | 5.2:-34610003 | None:intergenic |
| ATATCCACACAAACTGGCAT+TGG | 0.586556 | 5.2:+34610589 | MS.gene76856:CDS |
| TTTGAACTGATATGAGAACT+GGG | 0.604778 | 5.2:-34607116 | None:intergenic |
| AACTCACTGCACGCTTTGGT+AGG | 0.605690 | 5.2:-34608159 | None:intergenic |
| GGTTGTACATCTCCTTGTGG+GGG | 0.609093 | 5.2:+34608105 | MS.gene76856:CDS |
| TCTATATTCTAAGAAAGCAA+TGG | 0.613760 | 5.2:+34609533 | MS.gene76856:CDS |
| AGTACCAATGCCAGTTTGTG+TGG | 0.619792 | 5.2:-34610593 | None:intergenic |
| TTAGCAGCAGATGCTGATGA+TGG | 0.621134 | 5.2:+34607315 | MS.gene76856:CDS |
| AACAGCAGCAAATGATACAT+TGG | 0.623207 | 5.2:-34608594 | None:intergenic |
| GAGCGTCCGTTAAGATGTAA+GGG | 0.623605 | 5.2:-34610793 | None:intergenic |
| AAAGATAGCCACAGAGACAG+GGG | 0.624479 | 5.2:-34609230 | None:intergenic |
| GCGCCACTAACACATGCAGT+TGG | 0.626603 | 5.2:+34610259 | MS.gene76856:CDS |
| GTCTCGAACACTTCAACATG+AGG | 0.628617 | 5.2:+34607209 | MS.gene76856:CDS |
| TGAACTCACAAGAATTGCCG+GGG | 0.635557 | 5.2:-34609719 | None:intergenic |
| CATTGGACATGACATGACCA+AGG | 0.673962 | 5.2:-34608577 | None:intergenic |
| ATTGGACATGACATGACCAA+GGG | 0.677416 | 5.2:-34608576 | None:intergenic |
| AATCCAAACTCCATCAGCTG+GGG | 0.679194 | 5.2:-34610002 | None:intergenic |
| ACAGAGACAGGGGAATATGG+TGG | 0.688163 | 5.2:-34609220 | None:intergenic |
| GAACTCACAAGAATTGCCGG+GGG | 0.692863 | 5.2:-34609718 | None:intergenic |
| ATGGTGGCCTAAGACAAACT+GGG | 0.748077 | 5.2:-34609204 | None:intergenic |
| AACTCACAAGAATTGCCGGG+GGG | 0.771896 | 5.2:-34609717 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGATTAAAACTATATAT+CGG | + | chr5.2:34608808-34608827 | MS.gene76856:intron | 10.0% |
| !! | AAAATATTAGCATAATGTTA+AGG | - | chr5.2:34608061-34608080 | None:intergenic | 15.0% |
| !! | AAAATCAATAGTAAAATTAC+AGG | - | chr5.2:34609933-34609952 | None:intergenic | 15.0% |
| !! | AAATATTAGCATAATGTTAA+GGG | - | chr5.2:34608060-34608079 | None:intergenic | 15.0% |
| !! | ATAAATAAAGAAAAGATTGT+AGG | - | chr5.2:34610704-34610723 | None:intergenic | 15.0% |
| !! | TAATCAAAAGAATTAAGAAA+TGG | - | chr5.2:34607599-34607618 | None:intergenic | 15.0% |
| !! | TATCTTAATTAAGTACTTAT+AGG | - | chr5.2:34607450-34607469 | None:intergenic | 15.0% |
| !! | TTTATCAAATTCTTATAACA+TGG | + | chr5.2:34609370-34609389 | MS.gene76856:intron | 15.0% |
| !!! | AAATTGAACAAATTTTTTGT+AGG | + | chr5.2:34609858-34609877 | MS.gene76856:intron | 15.0% |
| !!! | AATTGAACAAATTTTTTGTA+GGG | + | chr5.2:34609859-34609878 | MS.gene76856:intron | 15.0% |
| !!! | CCAAAATTTTAGAATATAAT+CGG | - | chr5.2:34610549-34610568 | None:intergenic | 15.0% |
| !!! | TGTATTTTTAAAAAACAAAC+TGG | + | chr5.2:34608330-34608349 | MS.gene76856:intron | 15.0% |
| !! | AAAAAAACTGAAGAAATTTG+AGG | - | chr5.2:34607144-34607163 | None:intergenic | 20.0% |
| !! | AAGTTAGAAAAAGAATATGA+TGG | - | chr5.2:34610372-34610391 | None:intergenic | 20.0% |
| !! | AATTTAGAAGTTAATTCTTG+AGG | - | chr5.2:34607992-34608011 | None:intergenic | 20.0% |
| !! | CAAGAATTAACTTCTAAATT+AGG | + | chr5.2:34607992-34608011 | MS.gene76856:intron | 20.0% |
| !! | TTTATATATAAGCACTTGTA+CGG | + | chr5.2:34607413-34607432 | MS.gene76856:intron | 20.0% |
| !!! | AAAATTTTGGTAACATTTGT+AGG | + | chr5.2:34610559-34610578 | MS.gene76856:intron | 20.0% |
| !!! | CCGATTATATTCTAAAATTT+TGG | + | chr5.2:34610546-34610565 | MS.gene76856:intron | 20.0% |
| !!! | GAAATGTTTAATACCTTTTA+TGG | - | chr5.2:34608639-34608658 | None:intergenic | 20.0% |
| !!! | TATTTCAAAATTTTACAGAC+TGG | + | chr5.2:34609637-34609656 | MS.gene76856:intron | 20.0% |
| !!! | TTATTTTAATGTTCCTCATT+TGG | - | chr5.2:34607809-34607828 | None:intergenic | 20.0% |
| !!! | TTTTATAGGTACTAAATGTA+GGG | - | chr5.2:34609823-34609842 | None:intergenic | 20.0% |
| ! | AAAAACTTACCTAAAACAAC+AGG | - | chr5.2:34609260-34609279 | None:intergenic | 25.0% |
| ! | ACAAAGTTATAGAGTTATCT+TGG | - | chr5.2:34608018-34608037 | None:intergenic | 25.0% |
| ! | ACCTAAAGAACAAATAGAAT+AGG | - | chr5.2:34610417-34610436 | None:intergenic | 25.0% |
| ! | ATTAAAACTATATATCGGTC+CGG | + | chr5.2:34608813-34608832 | MS.gene76856:intron | 25.0% |
| ! | GTGAAATTGAAATCTCTAAT+GGG | + | chr5.2:34607337-34607356 | MS.gene76856:CDS | 25.0% |
| ! | TCCTATTCTATTTGTTCTTT+AGG | + | chr5.2:34610413-34610432 | MS.gene76856:intron | 25.0% |
| ! | TGAAAATGGTAATAAAGGAA+GGG | - | chr5.2:34608922-34608941 | None:intergenic | 25.0% |
| !! | AATTAACCTTTCAGTAGTTT+TGG | - | chr5.2:34609752-34609771 | None:intergenic | 25.0% |
| !! | ACTACTGAAAGGTTAATTTT+AGG | + | chr5.2:34609754-34609773 | MS.gene76856:intron | 25.0% |
| !! | ATAACTTTGTAGCTTTTGAT+TGG | + | chr5.2:34608028-34608047 | MS.gene76856:intron | 25.0% |
| !! | ATCCAAAAAACTTTGAGAAA+AGG | - | chr5.2:34609582-34609601 | None:intergenic | 25.0% |
| !! | CTACTGAAAGGTTAATTTTA+GGG | + | chr5.2:34609755-34609774 | MS.gene76856:intron | 25.0% |
| !! | CTTTTATAGGTACTAAATGT+AGG | - | chr5.2:34609824-34609843 | None:intergenic | 25.0% |
| !! | TACCTTTTCTCAAAGTTTTT+TGG | + | chr5.2:34609577-34609596 | MS.gene76856:intron | 25.0% |
| !! | TCTATATTCTAAGAAAGCAA+TGG | + | chr5.2:34609533-34609552 | MS.gene76856:CDS | 25.0% |
| !! | TCTTTTACACATACCATAAA+AGG | + | chr5.2:34608623-34608642 | MS.gene76856:CDS | 25.0% |
| !!! | TTTCTCAAAGTTTTTTGGAT+TGG | + | chr5.2:34609582-34609601 | MS.gene76856:intron | 25.0% |
| AAGAAGAGCAAAAAGAGAAT+CGG | + | chr5.2:34607779-34607798 | MS.gene76856:intron | 30.0% | |
| AGGAAAACATACTATGGATA+TGG | - | chr5.2:34607972-34607991 | None:intergenic | 30.0% | |
| AGTACCTATAAAAGCAAAAC+AGG | + | chr5.2:34609830-34609849 | MS.gene76856:intron | 30.0% | |
| AGTGTTAACAACAAGAACAT+AGG | - | chr5.2:34608684-34608703 | None:intergenic | 30.0% | |
| ATAAAGCACAAATACAGACA+CGG | + | chr5.2:34607481-34607500 | MS.gene76856:intron | 30.0% | |
| ATCAAGATAACAAGAGACAT+AGG | - | chr5.2:34610731-34610750 | None:intergenic | 30.0% | |
| ATCAGAGAAAGTTAAACACA+AGG | - | chr5.2:34607572-34607591 | None:intergenic | 30.0% | |
| ATTAGCATAATGTTAAGGGA+AGG | - | chr5.2:34608056-34608075 | None:intergenic | 30.0% | |
| CAAATTATCAACAGTGTTGT+CGG | - | chr5.2:34607512-34607531 | None:intergenic | 30.0% | |
| CATATCTTAGACAGTGAAAA+TGG | - | chr5.2:34608936-34608955 | None:intergenic | 30.0% | |
| CTAATATGAGTTTCACTGTT+AGG | + | chr5.2:34609420-34609439 | MS.gene76856:intron | 30.0% | |
| CTGTATTTGTGCTTTATAGT+TGG | - | chr5.2:34607478-34607497 | None:intergenic | 30.0% | |
| GAAAATGGTAATAAAGGAAG+GGG | - | chr5.2:34608921-34608940 | None:intergenic | 30.0% | |
| GACAGTGAAAATGGTAATAA+AGG | - | chr5.2:34608927-34608946 | None:intergenic | 30.0% | |
| GATCAAACAATTGAGACTTT+CGG | + | chr5.2:34608232-34608251 | MS.gene76856:intron | 30.0% | |
| GATTATTGATGTCCAATTAC+AGG | + | chr5.2:34607614-34607633 | MS.gene76856:intron | 30.0% | |
| GGCAATAATATGATTGTGAT+TGG | - | chr5.2:34608900-34608919 | None:intergenic | 30.0% | |
| GGTGAAATTGAAATCTCTAA+TGG | + | chr5.2:34607336-34607355 | MS.gene76856:CDS | 30.0% | |
| GTACCTATAAAAGCAAAACA+GGG | + | chr5.2:34609831-34609850 | MS.gene76856:intron | 30.0% | |
| GTGAAAATGGTAATAAAGGA+AGG | - | chr5.2:34608923-34608942 | None:intergenic | 30.0% | |
| TAACTGAACTGTCTTTCAAT+TGG | + | chr5.2:34609460-34609479 | MS.gene76856:CDS | 30.0% | |
| TCAACCAGAAAGAAATAAGA+AGG | - | chr5.2:34609286-34609305 | None:intergenic | 30.0% | |
| TGAAAATCGTGAATTATGCA+AGG | + | chr5.2:34609890-34609909 | MS.gene76856:intron | 30.0% | |
| TGCTTTAATCACTGAATAGA+TGG | - | chr5.2:34610641-34610660 | None:intergenic | 30.0% | |
| TTACTACCAAAACTACTGAA+AGG | + | chr5.2:34609743-34609762 | MS.gene76856:intron | 30.0% | |
| TTCTTGAGGAAAACATACTA+TGG | - | chr5.2:34607978-34607997 | None:intergenic | 30.0% | |
| TTTCTCATGATCGCATAAAA+CGG | - | chr5.2:34607723-34607742 | None:intergenic | 30.0% | |
| TTTGAACTGATATGAGAACT+GGG | - | chr5.2:34607119-34607138 | None:intergenic | 30.0% | |
| TTTGAGAAAAGGTAACAATG+TGG | - | chr5.2:34609571-34609590 | None:intergenic | 30.0% | |
| ! | AAAGCGCTCATTTGTTAATA+AGG | - | chr5.2:34609796-34609815 | None:intergenic | 30.0% |
| ! | CAAAATTTTACAGACTGGAA+TGG | + | chr5.2:34609642-34609661 | MS.gene76856:intron | 30.0% |
| ! | CTGGTTTCTTTTTCTTTATG+TGG | + | chr5.2:34607686-34607705 | MS.gene76856:CDS | 30.0% |
| ! | GAGACTTTTCTAAATTGGTT+AGG | + | chr5.2:34608785-34608804 | MS.gene76856:intron | 30.0% |
| ! | GTTGAACTTGAAACTCTTTT+TGG | - | chr5.2:34607171-34607190 | None:intergenic | 30.0% |
| ! | GTTTTACCATCTTTACAATC+AGG | + | chr5.2:34610088-34610107 | MS.gene76856:CDS | 30.0% |
| ! | TGTTCCTTCTTATTTCTTTC+TGG | + | chr5.2:34609279-34609298 | MS.gene76856:intron | 30.0% |
| ! | TTGAAGAGAGTTTTTGTCAT+TGG | + | chr5.2:34610289-34610308 | MS.gene76856:CDS | 30.0% |
| ! | TTTTCTCAAATACTCATGTG+TGG | - | chr5.2:34609002-34609021 | None:intergenic | 30.0% |
| !! | AATTCGTTTCAGCTTTGTTT+CGG | + | chr5.2:34608084-34608103 | MS.gene76856:intron | 30.0% |
| !! | GTTTCAAGTTCAACTAGTTA+TGG | + | chr5.2:34607177-34607196 | MS.gene76856:CDS | 30.0% |
| !! | TAATTTGAGTTGTGTGAAGA+TGG | - | chr5.2:34609619-34609638 | None:intergenic | 30.0% |
| !! | TGATTGATTTGTGGTTCAAT+CGG | + | chr5.2:34608392-34608411 | MS.gene76856:intron | 30.0% |
| AAACATCGAAGAGCAAAAAC+GGG | + | chr5.2:34610660-34610679 | MS.gene76856:CDS | 35.0% | |
| AAACTTTGTCAGTCCTACTT+TGG | - | chr5.2:34610042-34610061 | None:intergenic | 35.0% | |
| AACAAGAGCTCCTTATTCAT+TGG | - | chr5.2:34608527-34608546 | None:intergenic | 35.0% | |
| AACAAGATATCCACACAAAC+TGG | + | chr5.2:34610583-34610602 | MS.gene76856:CDS | 35.0% | |
| AACAGCAGCAAATGATACAT+TGG | - | chr5.2:34608597-34608616 | None:intergenic | 35.0% | |
| AACCAGTTCATGTTTGGATT+AGG | - | chr5.2:34608428-34608447 | None:intergenic | 35.0% | |
| AATGAACTCACAAGAATTGC+CGG | - | chr5.2:34609724-34609743 | None:intergenic | 35.0% | |
| ACAATTGAGACTTTCGGATA+AGG | + | chr5.2:34608238-34608257 | MS.gene76856:intron | 35.0% | |
| AGAAATGCTATTGCCAAAGT+AGG | + | chr5.2:34610026-34610045 | MS.gene76856:CDS | 35.0% | |
| AGGATACCTGATTGTAAAGA+TGG | - | chr5.2:34610097-34610116 | None:intergenic | 35.0% | |
| AGTCTCAATTGTTTGATCTC+TGG | - | chr5.2:34608230-34608249 | None:intergenic | 35.0% | |
| CAAACATCGAAGAGCAAAAA+CGG | + | chr5.2:34610659-34610678 | MS.gene76856:CDS | 35.0% | |
| CAACACTTGACTAAAACACA+AGG | - | chr5.2:34610117-34610136 | None:intergenic | 35.0% | |
| CATGAGAAATCTATGAGACA+CGG | + | chr5.2:34607734-34607753 | MS.gene76856:intron | 35.0% | |
| CTCTTGTTAGCCAATGAATA+AGG | + | chr5.2:34608514-34608533 | MS.gene76856:intron | 35.0% | |
| CTTTGAACTGATATGAGAAC+TGG | - | chr5.2:34607120-34607139 | None:intergenic | 35.0% | |
| GCACTTGAATTTCCAATAAC+TGG | - | chr5.2:34608762-34608781 | None:intergenic | 35.0% | |
| GTACCTGCATATATAGAAGT+AGG | - | chr5.2:34607898-34607917 | None:intergenic | 35.0% | |
| TCTTGGGATAAACCAGTTAT+TGG | + | chr5.2:34608747-34608766 | MS.gene76856:intron | 35.0% | |
| TGTCATTGGATTCTCTATAG+TGG | + | chr5.2:34610303-34610322 | MS.gene76856:CDS | 35.0% | |
| TGTCCTACTTCTATATATGC+AGG | + | chr5.2:34607892-34607911 | MS.gene76856:intron | 35.0% | |
| TTCACTGTTAGGTGTATCAA+TGG | + | chr5.2:34609431-34609450 | MS.gene76856:intron | 35.0% | |
| TTCCTAATCCAAACATGAAC+TGG | + | chr5.2:34608423-34608442 | MS.gene76856:intron | 35.0% | |
| TTGGATGCTTCTTAGATTGA+AGG | + | chr5.2:34609978-34609997 | MS.gene76856:intron | 35.0% | |
| TTTCACAACCAGTTCATGTT+TGG | - | chr5.2:34608434-34608453 | None:intergenic | 35.0% | |
| TTTCTCACCAAAACTCTTTG+AGG | - | chr5.2:34607650-34607669 | None:intergenic | 35.0% | |
| ! | AGTTTCTGTCTGATCTTTTC+TGG | + | chr5.2:34610057-34610076 | MS.gene76856:CDS | 35.0% |
| ! | ATTTTCTCTCTTTGTAGCTC+TGG | + | chr5.2:34609157-34609176 | MS.gene76856:intron | 35.0% |
| ! | CTTATTCATTGGCTAACAAG+AGG | - | chr5.2:34608516-34608535 | None:intergenic | 35.0% |
| ! | GCGATGAGACTTTTCTAAAT+TGG | + | chr5.2:34608780-34608799 | MS.gene76856:intron | 35.0% |
| !! | AAATTTCCTGCATTGGTTAC+TGG | + | chr5.2:34607667-34607686 | MS.gene76856:CDS | 35.0% |
| !! | ACTGAGAACTGATTGATTTG+TGG | + | chr5.2:34608383-34608402 | MS.gene76856:intron | 35.0% |
| !! | AGTCCCTGTTTTGCTTTTAT+AGG | - | chr5.2:34609837-34609856 | None:intergenic | 35.0% |
| !! | CCTTTGGAGTAAAACAAAGA+AGG | + | chr5.2:34607274-34607293 | MS.gene76856:CDS | 35.0% |
| !! | CTTGTTGTTAACACTGAAGT+TGG | + | chr5.2:34608689-34608708 | MS.gene76856:intron | 35.0% |
| !! | GAAGCTGAAGCATTGAAAAA+TGG | - | chr5.2:34609185-34609204 | None:intergenic | 35.0% |
| !! | GTTTGTGACTGATTTCGTTT+TGG | + | chr5.2:34609959-34609978 | MS.gene76856:intron | 35.0% |
| !! | TGAGGCTTTAAATTCAAGCT+TGG | + | chr5.2:34607227-34607246 | MS.gene76856:CDS | 35.0% |
| !!! | CCTTCTTTGTTTTACTCCAA+AGG | - | chr5.2:34607277-34607296 | None:intergenic | 35.0% |
| !!! | TCTTTGACTCCTGTTGTTTT+AGG | + | chr5.2:34609248-34609267 | MS.gene76856:CDS | 35.0% |
| AAATCCAAACTCCATCAGCT+GGG | - | chr5.2:34610006-34610025 | None:intergenic | 40.0% | |
| AAGAAACCAGTAACCAATGC+AGG | - | chr5.2:34607676-34607695 | None:intergenic | 40.0% | |
| ACTCATGTGTGGAACTTCTT+TGG | - | chr5.2:34608991-34609010 | None:intergenic | 40.0% | |
| ACTTTCGGATAAGGTTCAAC+TGG | + | chr5.2:34608247-34608266 | MS.gene76856:intron | 40.0% | |
| ATATCCACACAAACTGGCAT+TGG | + | chr5.2:34610589-34610608 | MS.gene76856:CDS | 40.0% | |
| ATGAACTCACAAGAATTGCC+GGG | - | chr5.2:34609723-34609742 | None:intergenic | 40.0% | |
| ATTGGACATGACATGACCAA+GGG | - | chr5.2:34608579-34608598 | None:intergenic | 40.0% | |
| GAACTGTCTTTCAATTGGAC+TGG | + | chr5.2:34609465-34609484 | MS.gene76856:CDS | 40.0% | |
| GGATTCTCTATAGTGGTGTT+TGG | + | chr5.2:34610310-34610329 | MS.gene76856:CDS | 40.0% | |
| TAAATCCAAACTCCATCAGC+TGG | - | chr5.2:34610007-34610026 | None:intergenic | 40.0% | |
| TGGTGAGAAATTTCCTGCAT+TGG | + | chr5.2:34607660-34607679 | MS.gene76856:CDS | 40.0% | |
| TTTCCAACTGCATGTGTTAG+TGG | - | chr5.2:34610265-34610284 | None:intergenic | 40.0% | |
| ! | CACCAAAACTCTTTGAGGAT+TGG | - | chr5.2:34607645-34607664 | None:intergenic | 40.0% |
| ! | CTGTCTGATCTTTTCTGGAT+TGG | + | chr5.2:34610062-34610081 | MS.gene76856:CDS | 40.0% |
| ! | GTCCAATCCTCAAAGAGTTT+TGG | + | chr5.2:34607640-34607659 | MS.gene76856:CDS | 40.0% |
| ! | GTGAACATCTTTTGTCTGTC+TGG | + | chr5.2:34608711-34608730 | MS.gene76856:intron | 40.0% |
| !! | GCAGCTTGCTACTAATACTT+TGG | + | chr5.2:34610228-34610247 | MS.gene76856:intron | 40.0% |
| !! | TGGTGTATTGCCTTTTTAGC+TGG | + | chr5.2:34608128-34608147 | MS.gene76856:CDS | 40.0% |
| !!! | GGTGTATTGCCTTTTTAGCT+GGG | + | chr5.2:34608129-34608148 | MS.gene76856:CDS | 40.0% |
| !!! | GTGTATTGCCTTTTTAGCTG+GGG | + | chr5.2:34608130-34608149 | MS.gene76856:CDS | 40.0% |
| AAAGATAGCCACAGAGACAG+GGG | - | chr5.2:34609233-34609252 | None:intergenic | 45.0% | |
| AATCCAAACTCCATCAGCTG+GGG | - | chr5.2:34610005-34610024 | None:intergenic | 45.0% | |
| AGGGCATGACAAAATGCAAC+TGG | - | chr5.2:34608560-34608579 | None:intergenic | 45.0% | |
| AGTACCAATGCCAGTTTGTG+TGG | - | chr5.2:34610596-34610615 | None:intergenic | 45.0% | |
| AGTTCTCAGTCCCTTAGAAC+TGG | - | chr5.2:34608373-34608392 | None:intergenic | 45.0% | |
| ATCATCAGCATCTGCTGCTA+AGG | - | chr5.2:34607316-34607335 | None:intergenic | 45.0% | |
| ATCGGTCCGGTTGAAATAGA+AGG | + | chr5.2:34608826-34608845 | MS.gene76856:intron | 45.0% | |
| ATGGTGGCCTAAGACAAACT+GGG | - | chr5.2:34609207-34609226 | None:intergenic | 45.0% | |
| CAAAGATAGCCACAGAGACA+GGG | - | chr5.2:34609234-34609253 | None:intergenic | 45.0% | |
| CATTGGACATGACATGACCA+AGG | - | chr5.2:34608580-34608599 | None:intergenic | 45.0% | |
| CTTAGAACTGGATCGAACTG+CGG | - | chr5.2:34608361-34608380 | None:intergenic | 45.0% | |
| GAGAATCGGAATGCCAAATG+AGG | + | chr5.2:34607793-34607812 | MS.gene76856:intron | 45.0% | |
| GGATTGGACAGACCTGTAAT+TGG | - | chr5.2:34607629-34607648 | None:intergenic | 45.0% | |
| GGTACTGCTATTGCAATTGC+AGG | + | chr5.2:34610610-34610629 | MS.gene76856:CDS | 45.0% | |
| GTATAACTCACTGCACGCTT+TGG | - | chr5.2:34608166-34608185 | None:intergenic | 45.0% | |
| GTCTCGAACACTTCAACATG+AGG | + | chr5.2:34607209-34607228 | MS.gene76856:CDS | 45.0% | |
| GTTCTCTCCACTGGTGAAAA+AGG | + | chr5.2:34607251-34607270 | MS.gene76856:CDS | 45.0% | |
| TATGGTGGCCTAAGACAAAC+TGG | - | chr5.2:34609208-34609227 | None:intergenic | 45.0% | |
| TCAAAGATAGCCACAGAGAC+AGG | - | chr5.2:34609235-34609254 | None:intergenic | 45.0% | |
| TCAGCTTCCCAGTTTGTCTT+AGG | + | chr5.2:34609197-34609216 | MS.gene76856:CDS | 45.0% | |
| TCCGGTTGAAATAGAAGGGA+CGG | + | chr5.2:34608831-34608850 | MS.gene76856:intron | 45.0% | |
| TCCGTCCCTTCTATTTCAAC+CGG | - | chr5.2:34608835-34608854 | None:intergenic | 45.0% | |
| TCGGTCCGGTTGAAATAGAA+GGG | + | chr5.2:34608827-34608846 | MS.gene76856:intron | 45.0% | |
| TCGGTTGTACATCTCCTTGT+GGG | + | chr5.2:34608103-34608122 | MS.gene76856:CDS | 45.0% | |
| TGAACTCACAAGAATTGCCG+GGG | - | chr5.2:34609722-34609741 | None:intergenic | 45.0% | |
| TTAACCGTGATTCAACTGCC+TGG | - | chr5.2:34608274-34608293 | None:intergenic | 45.0% | |
| TTAGCAGCAGATGCTGATGA+TGG | + | chr5.2:34607315-34607334 | MS.gene76856:CDS | 45.0% | |
| TTCGGTTGTACATCTCCTTG+TGG | + | chr5.2:34608102-34608121 | MS.gene76856:CDS | 45.0% | |
| ! | AGCAGGGTTTAGAGTGAATG+AGG | + | chr5.2:34608858-34608877 | MS.gene76856:intron | 45.0% |
| ! | ATAGAAGGGACGGATTTAGC+AGG | + | chr5.2:34608841-34608860 | MS.gene76856:intron | 45.0% |
| ! | GCAGTTCGATCCAGTTCTAA+GGG | + | chr5.2:34608360-34608379 | MS.gene76856:intron | 45.0% |
| ! | GTTGCATTTTGTCATGCCCT+TGG | + | chr5.2:34608560-34608579 | MS.gene76856:CDS | 45.0% |
| ! | TAGAAGGGACGGATTTAGCA+GGG | + | chr5.2:34608842-34608861 | MS.gene76856:intron | 45.0% |
| ! | TGATTTGTGGTTCAATCGGC+TGG | + | chr5.2:34608396-34608415 | MS.gene76856:intron | 45.0% |
| !!! | TGCCTTTTTAGCTGGGGTTT+AGG | + | chr5.2:34608136-34608155 | MS.gene76856:CDS | 45.0% |
| AACTCACAAGAATTGCCGGG+GGG | - | chr5.2:34609720-34609739 | None:intergenic | 50.0% | |
| AACTCACTGCACGCTTTGGT+AGG | - | chr5.2:34608162-34608181 | None:intergenic | 50.0% | |
| AATTGCCGGGGGGATACAAA+AGG | - | chr5.2:34609710-34609729 | None:intergenic | 50.0% | |
| ACAGAGACAGGGGAATATGG+TGG | - | chr5.2:34609223-34609242 | None:intergenic | 50.0% | |
| ACCATATTCCCCTGTCTCTG+TGG | + | chr5.2:34609222-34609241 | MS.gene76856:CDS | 50.0% | |
| CCACTGGTGAAAAAGGCCTT+TGG | + | chr5.2:34607258-34607277 | MS.gene76856:CDS | 50.0% | |
| CGCAGTTCGATCCAGTTCTA+AGG | + | chr5.2:34608359-34608378 | MS.gene76856:intron | 50.0% | |
| CGGTTGTACATCTCCTTGTG+GGG | + | chr5.2:34608104-34608123 | MS.gene76856:CDS | 50.0% | |
| GAACTCACAAGAATTGCCGG+GGG | - | chr5.2:34609721-34609740 | None:intergenic | 50.0% | |
| GCTGCTAAGGCTGTAACAAC+AGG | - | chr5.2:34607303-34607322 | None:intergenic | 50.0% | |
| GGATAAGGTTCAACTGGTCC+AGG | + | chr5.2:34608253-34608272 | MS.gene76856:intron | 50.0% | |
| GGCCTAAACCCCAGCTAAAA+AGG | - | chr5.2:34608141-34608160 | None:intergenic | 50.0% | |
| GGTTGTACATCTCCTTGTGG+GGG | + | chr5.2:34608105-34608124 | MS.gene76856:CDS | 50.0% | |
| GTCTGTCTGGTTGCATTCCT+CGG | + | chr5.2:34608724-34608743 | MS.gene76856:intron | 50.0% | |
| TGGTCCAGGCAGTTGAATCA+CGG | + | chr5.2:34608267-34608286 | MS.gene76856:intron | 50.0% | |
| TGGTTGCATTCCTCGGTCTT+GGG | + | chr5.2:34608731-34608750 | MS.gene76856:intron | 50.0% | |
| ! | ACTGGTTTATCCCAAGACCG+AGG | - | chr5.2:34608744-34608763 | None:intergenic | 50.0% |
| ! | GCTGCAGCAGCTTTCTGAAA+TGG | - | chr5.2:34610774-34610793 | None:intergenic | 50.0% |
| !! | AAGCTTGGTGTTCTCTCCAC+TGG | + | chr5.2:34607242-34607261 | MS.gene76856:CDS | 50.0% |
| !! | CCAAAGGCCTTTTTCACCAG+TGG | - | chr5.2:34607261-34607280 | None:intergenic | 50.0% |
| CTGGTTGCATTCCTCGGTCT+TGG | + | chr5.2:34608730-34608749 | MS.gene76856:intron | 55.0% | |
| GATTGAAGGACCCCAGCTGA+TGG | + | chr5.2:34609992-34610011 | MS.gene76856:intron | 55.0% | |
| GCCACAGAGACAGGGGAATA+TGG | - | chr5.2:34609226-34609245 | None:intergenic | 55.0% | |
| GCGCCACTAACACATGCAGT+TGG | + | chr5.2:34610259-34610278 | MS.gene76856:CDS | 55.0% | |
| TGTACATCTCCTTGTGGGGG+TGG | + | chr5.2:34608108-34608127 | MS.gene76856:CDS | 55.0% | |
| TTGTGGTTCAATCGGCTGGC+TGG | + | chr5.2:34608400-34608419 | MS.gene76856:intron | 55.0% | |
| ! | ACTCGCCTTTTGTATCCCCC+CGG | + | chr5.2:34609702-34609721 | MS.gene76856:CDS | 55.0% |
| GGACCCCAGCTGATGGAGTT+TGG | + | chr5.2:34609999-34610018 | MS.gene76856:CDS | 60.0% | |
| GGCAATACACCACCCCCACA+AGG | - | chr5.2:34608120-34608139 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 34607099 | 34610806 | 34607099 | ID=MS.gene76856 |
| chr5.2 | mRNA | 34607099 | 34610806 | 34607099 | ID=MS.gene76856.t1;Parent=MS.gene76856 |
| chr5.2 | exon | 34607099 | 34607358 | 34607099 | ID=MS.gene76856.t1.exon1;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34607099 | 34607358 | 34607099 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34607636 | 34607707 | 34607636 | ID=MS.gene76856.t1.exon2;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34607636 | 34607707 | 34607636 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34607914 | 34607979 | 34607914 | ID=MS.gene76856.t1.exon3;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34607914 | 34607979 | 34607914 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34608096 | 34608174 | 34608096 | ID=MS.gene76856.t1.exon4;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34608096 | 34608174 | 34608096 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34608524 | 34608644 | 34608524 | ID=MS.gene76856.t1.exon5;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34608524 | 34608644 | 34608524 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34609174 | 34609269 | 34609174 | ID=MS.gene76856.t1.exon6;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34609174 | 34609269 | 34609174 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34609442 | 34609554 | 34609442 | ID=MS.gene76856.t1.exon7;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34609442 | 34609554 | 34609442 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34609655 | 34609732 | 34609655 | ID=MS.gene76856.t1.exon8;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34609655 | 34609732 | 34609655 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34609993 | 34610109 | 34609993 | ID=MS.gene76856.t1.exon9;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34609993 | 34610109 | 34609993 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34610232 | 34610331 | 34610232 | ID=MS.gene76856.t1.exon10;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34610232 | 34610331 | 34610232 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34610581 | 34610681 | 34610581 | ID=MS.gene76856.t1.exon11;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34610581 | 34610681 | 34610581 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| chr5.2 | exon | 34610780 | 34610806 | 34610780 | ID=MS.gene76856.t1.exon12;Parent=MS.gene76856.t1 |
| chr5.2 | CDS | 34610780 | 34610806 | 34610780 | ID=cds.MS.gene76856.t1;Parent=MS.gene76856.t1 |
| Gene Sequence |
| Protein sequence |
