AlfalfaGEDB | MS.gene81079

M. sativa cultivar XinJiangDaYe / MS.gene81079

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF02362.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81079.t1	XP_024628015.1	92	348	20	4	1	341	171	517	5.20E-146	527.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81079.t1	Q6EU30	65.6	160	48	4	1	158	95	249	8.3e-52	205.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81079.t1	A0A072TYC0	92.0	348	20	4	1	341	171	517	3.7e-146	527.3

TFs/TRs:

Gene ID	Type	Classification
MS.gene81079.t1	TF	B3

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050426	MS.gene81079	-0.830336	3.11E-55	-1.69E-46
MS.gene050464	MS.gene81079	0.802086	6.63E-49	-1.69E-46
MS.gene050670	MS.gene81079	0.844221	8.65E-59	-1.69E-46
MS.gene050971	MS.gene81079	0.917521	4.80E-86	-1.69E-46
MS.gene051525	MS.gene81079	0.809019	2.33E-50	-1.69E-46
MS.gene051860	MS.gene81079	0.814817	1.27E-51	-1.69E-46
MS.gene051983	MS.gene81079	0.816466	5.45E-52	-1.69E-46
MS.gene052011	MS.gene81079	-0.852441	4.61E-61	-1.69E-46
MS.gene052077	MS.gene81079	0.846086	2.71E-59	-1.69E-46
MS.gene052128	MS.gene81079	-0.810473	1.13E-50	-1.69E-46
MS.gene052188	MS.gene81079	0.836489	9.08E-57	-1.69E-46
MS.gene052253	MS.gene81079	0.818996	1.46E-52	-1.69E-46
MS.gene052340	MS.gene81079	0.809507	1.83E-50	-1.69E-46
MS.gene05316	MS.gene81079	0.813236	2.83E-51	-1.69E-46
MS.gene053758	MS.gene81079	0.820257	7.55E-53	-1.69E-46
MS.gene053928	MS.gene81079	0.806911	6.54E-50	-1.69E-46
MS.gene054010	MS.gene81079	0.807948	3.94E-50	-1.69E-46
MS.gene054011	MS.gene81079	0.816122	6.51E-52	-1.69E-46
MS.gene054012	MS.gene81079	0.810525	1.10E-50	-1.69E-46
MS.gene054013	MS.gene81079	0.802788	4.75E-49	-1.69E-46
MS.gene054183	MS.gene81079	0.836162	1.10E-56	-1.69E-46
MS.gene054349	MS.gene81079	0.818804	1.62E-52	-1.69E-46
MS.gene054556	MS.gene81079	0.831961	1.24E-55	-1.69E-46
MS.gene055116	MS.gene81079	0.809097	2.24E-50	-1.69E-46
MS.gene05553	MS.gene81079	0.809638	1.71E-50	-1.69E-46
MS.gene055604	MS.gene81079	0.815952	7.10E-52	-1.69E-46
MS.gene055744	MS.gene81079	0.812174	4.84E-51	-1.69E-46
MS.gene055909	MS.gene81079	0.801736	7.82E-49	-1.69E-46
MS.gene055911	MS.gene81079	0.805941	1.05E-49	-1.69E-46
MS.gene056407	MS.gene81079	0.808138	3.59E-50	-1.69E-46
MS.gene056659	MS.gene81079	0.835635	1.50E-56	-1.69E-46
MS.gene056899	MS.gene81079	-0.821682	3.55E-53	-1.69E-46
MS.gene056979	MS.gene81079	0.819576	1.08E-52	-1.69E-46
MS.gene057396	MS.gene81079	0.82335	1.45E-53	-1.69E-46
MS.gene057749	MS.gene81079	0.803774	2.97E-49	-1.69E-46
MS.gene057823	MS.gene81079	0.813296	2.75E-51	-1.69E-46
MS.gene058007	MS.gene81079	0.804724	1.88E-49	-1.69E-46
MS.gene058710	MS.gene81079	0.808543	2.94E-50	-1.69E-46
MS.gene05886	MS.gene81079	0.800003	1.77E-48	-1.69E-46
MS.gene058928	MS.gene81079	0.80996	1.46E-50	-1.69E-46
MS.gene05907	MS.gene81079	0.812847	3.45E-51	-1.69E-46
MS.gene059082	MS.gene81079	0.801843	7.44E-49	-1.69E-46
MS.gene059294	MS.gene81079	0.843207	1.61E-58	-1.69E-46
MS.gene059420	MS.gene81079	0.851405	9.07E-61	-1.69E-46
MS.gene059807	MS.gene81079	0.816796	4.60E-52	-1.69E-46
MS.gene05984	MS.gene81079	0.822179	2.72E-53	-1.69E-46
MS.gene061154	MS.gene81079	0.855012	8.39E-62	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81079.t1	MTR_8g023990	95.402	348	8	4	1	341	171	517	0.0	680
MS.gene81079.t1	MTR_7g117455	90.654	107	10	0	1	107	117	223	5.23e-65	213
MS.gene81079.t1	MTR_5g053920	67.227	119	29	2	1	111	194	310	8.81e-48	165
MS.gene81079.t1	MTR_1g058350	70.642	109	28	2	1	107	75	181	1.08e-46	161
MS.gene81079.t1	MTR_7g105370	73.333	105	25	2	6	110	65	166	1.17e-46	160
MS.gene81079.t1	MTR_1g093600	63.333	120	29	2	1	107	191	308	1.96e-42	151
MS.gene81079.t1	MTR_1g116920	57.303	89	35	1	1	89	161	246	8.96e-28	110
MS.gene81079.t1	MTR_4g028130	36.134	119	68	4	1	117	314	426	1.72e-15	78.2
MS.gene81079.t1	MTR_4g028130	36.134	119	68	4	1	117	314	426	1.76e-15	77.8
MS.gene81079.t1	MTR_4g028130	37.273	110	61	4	1	108	314	417	5.45e-15	76.6
MS.gene81079.t1	MTR_2g011940	38.182	110	60	4	1	108	343	446	1.47e-14	75.1
MS.gene81079.t1	MTR_2g011940	38.182	110	60	4	1	108	352	455	1.96e-14	74.7
MS.gene81079.t1	MTR_2g011940	38.182	110	60	4	1	108	352	455	2.28e-14	74.3
MS.gene81079.t1	MTR_7g073240	40.000	110	56	5	1	107	121	223	5.91e-14	72.4
MS.gene81079.t1	MTR_5g075410	39.560	91	50	3	1	89	321	408	6.91e-14	73.2
MS.gene81079.t1	MTR_3g467380	39.560	91	50	3	1	89	338	425	2.50e-13	71.6
MS.gene81079.t1	MTR_4g088210	39.583	96	56	2	1	94	147	242	9.64e-12	66.6
MS.gene81079.t1	MTR_4g088210	39.583	96	56	2	1	94	147	242	1.08e-11	66.2
MS.gene81079.t1	MTR_2g014770	40.625	96	55	2	1	94	157	252	1.64e-11	65.9
MS.gene81079.t1	MTR_2g014770	40.625	96	55	2	1	94	157	252	2.02e-11	65.5
MS.gene81079.t1	MTR_3g073420	36.190	105	62	2	2	105	117	217	3.59e-11	64.7
MS.gene81079.t1	MTR_2g094570	37.500	96	58	2	2	95	108	203	5.85e-11	63.9
MS.gene81079.t1	MTR_2g094570	37.500	96	58	2	2	95	108	203	6.04e-11	63.9
MS.gene81079.t1	MTR_2g094570	37.500	96	58	2	2	95	164	259	6.69e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81079.t1	AT2G46870	48.421	285	83	9	1	284	34	255	9.52e-73	228
MS.gene81079.t1	AT1G01030	45.066	304	104	9	1	292	55	307	5.60e-65	209
MS.gene81079.t1	AT3G61970	46.290	283	71	11	1	280	22	226	9.29e-62	199
MS.gene81079.t1	AT1G01030	85.047	107	15	1	1	106	55	161	4.81e-60	196
MS.gene81079.t1	AT4G01500	61.486	148	42	3	1	135	35	180	3.05e-50	171
MS.gene81079.t1	AT3G11580	67.521	117	25	2	1	106	28	142	1.26e-48	163
MS.gene81079.t1	AT3G11580	67.521	117	25	2	1	106	28	142	1.26e-48	163
MS.gene81079.t1	AT3G11580	67.521	117	25	2	1	106	28	142	1.26e-48	163
MS.gene81079.t1	AT3G11580	67.521	117	25	2	1	106	28	142	3.61e-48	163
MS.gene81079.t1	AT1G68840	71.560	109	27	2	1	107	187	293	1.26e-47	164
MS.gene81079.t1	AT1G68840	71.560	109	27	2	1	107	187	293	1.26e-47	164
MS.gene81079.t1	AT3G11580	67.521	117	25	2	1	106	28	142	3.87e-47	164
MS.gene81079.t1	AT5G06250	59.398	133	42	2	1	123	45	175	8.30e-47	160
MS.gene81079.t1	AT5G06250	67.241	116	26	2	1	106	45	158	1.20e-46	160
MS.gene81079.t1	AT5G06250	67.241	116	26	2	1	106	45	158	1.22e-46	160
MS.gene81079.t1	AT5G06250	59.398	133	42	2	1	123	45	175	2.49e-46	158
MS.gene81079.t1	AT5G06250	59.398	133	42	2	1	123	45	175	2.68e-46	158
MS.gene81079.t1	AT1G13260	71.296	108	28	2	1	107	187	292	6.11e-46	160
MS.gene81079.t1	AT2G36080	69.725	109	28	2	1	106	37	143	1.91e-44	150
MS.gene81079.t1	AT2G36080	69.725	109	28	2	1	106	37	143	1.91e-44	150
MS.gene81079.t1	AT2G36080	69.725	109	28	2	1	106	37	143	2.63e-44	152
MS.gene81079.t1	AT2G36080	69.725	109	28	2	1	106	37	143	2.69e-44	152
MS.gene81079.t1	AT1G25560	63.793	116	32	2	1	108	194	307	3.33e-44	155
MS.gene81079.t1	AT3G25730	66.364	110	32	2	1	107	182	289	4.04e-43	152
MS.gene81079.t1	AT1G50680	50.000	98	38	2	1	87	156	253	9.69e-25	103
MS.gene81079.t1	AT1G51120	49.474	95	40	1	1	87	177	271	1.78e-23	99.8
MS.gene81079.t1	AT4G32010	38.182	110	60	4	1	108	285	388	1.53e-15	78.2
MS.gene81079.t1	AT4G32010	38.182	110	60	4	1	108	281	384	1.67e-15	78.2
MS.gene81079.t1	AT2G30470	39.560	91	50	3	1	89	294	381	3.63e-14	73.9
MS.gene81079.t1	AT1G35240	40.496	121	63	5	2	120	126	239	2.11e-13	71.6
MS.gene81079.t1	AT1G35520	39.669	121	64	5	2	120	126	239	1.07e-12	69.3
MS.gene81079.t1	AT1G34310	38.843	121	65	5	2	120	126	239	2.75e-12	68.2
MS.gene81079.t1	AT1G34410	38.017	121	66	5	2	120	126	239	1.18e-11	66.2
MS.gene81079.t1	AT1G35540	38.843	121	65	5	2	120	126	239	1.21e-11	66.2
MS.gene81079.t1	AT1G77850	35.238	105	63	2	2	105	119	219	3.24e-11	64.7
MS.gene81079.t1	AT1G77850	35.238	105	63	2	2	105	119	219	3.32e-11	64.7
MS.gene81079.t1	AT2G33860	39.560	91	54	1	1	90	1	91	4.13e-11	64.3
MS.gene81079.t1	AT2G33860	39.560	91	54	1	1	90	158	248	4.53e-11	64.3

Find 57 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGATTTAGATACTCTTAT+TGG	0.204888	8.4:+71031993	MS.gene81079:CDS
ATGTTTCCATTTCATCAATA+TGG	0.246411	8.4:+71032367	MS.gene81079:CDS
AACAACAATATTCTATTAGA+TGG	0.265622	8.4:+71032230	MS.gene81079:CDS
ATAGAATATTGTTGTTGATT+AGG	0.302183	8.4:-71032223	None:intergenic
GGCATAGGTTGTTTATAGAT+TGG	0.332546	8.4:+71032128	MS.gene81079:CDS
CTACTAATGGTGCTGCAAAA+AGG	0.355470	8.4:+71032623	MS.gene81079:CDS
CCACCACCATATTGATGAAA+TGG	0.378629	8.4:-71032373	None:intergenic
AAAATTCATCTGATTGTGTA+AGG	0.380849	8.4:-71032335	None:intergenic
TGCTGATGTTGTAACCTTTG+TGG	0.393602	8.4:-71032295	None:intergenic
CAACAAGAAGGAGGAGGAGG+AGG	0.405771	8.4:+71032508	MS.gene81079:CDS
GCGGCGTCGGCGAATTGTTT+AGG	0.427168	8.4:+71032107	MS.gene81079:CDS
TGTTGTAACCTTTGTGGTGT+TGG	0.444187	8.4:-71032289	None:intergenic
TTCAACAAGTGATGATAACT+TGG	0.444286	8.4:+71032687	MS.gene81079:CDS
CAAAGCTATGTCATGACAAA+AGG	0.445914	8.4:+71032025	MS.gene81079:CDS
GCTACTACTAGTACTACTAA+TGG	0.446131	8.4:+71032610	MS.gene81079:CDS
TGTTGGGAAACTAAACCGTT+TGG	0.462142	8.4:+71031871	MS.gene81079:CDS
TGATGATGATAATGAGAAAC+AGG	0.463873	8.4:-71032565	None:intergenic
TGTTGATTAGGAAGAAAGAA+AGG	0.468194	8.4:-71032211	None:intergenic
TCATTTGATGTTGAATCAAG+TGG	0.470685	8.4:-71031926	None:intergenic
ACCATCACTTCAACATTTGA+AGG	0.471635	8.4:+71032729	MS.gene81079:CDS
ATAGGTTGTTTATAGATTGG+AGG	0.472973	8.4:+71032131	MS.gene81079:CDS
AACCTTTGTGGTGTTGGATA+AGG	0.473019	8.4:-71032283	None:intergenic
GTTGTAACACCAAGTGATGT+TGG	0.474361	8.4:+71031854	MS.gene81079:CDS
ACAACAATATTCTATTAGAT+GGG	0.482618	8.4:+71032231	MS.gene81079:CDS
CATTACTAGTTAAATTTCCA+TGG	0.483330	8.4:-71032588	None:intergenic
CAGCAACAAGAAGGAGGAGG+AGG	0.488402	8.4:+71032505	MS.gene81079:CDS
AAGATAGAAATGGAAAATTG+TGG	0.489600	8.4:+71031972	MS.gene81079:CDS
TTGTAACACCAAGTGATGTT+GGG	0.490137	8.4:+71031855	MS.gene81079:CDS
TCGGCGAATTGTTTAGGCAT+AGG	0.495937	8.4:+71032113	MS.gene81079:CDS
CTTCCTTGAGGCATTGATGA+TGG	0.504465	8.4:-71032469	None:intergenic
CCATTTCATCAATATGGTGG+TGG	0.507266	8.4:+71032373	MS.gene81079:CDS
AATTCATCTGATTGTGTAAG+GGG	0.516476	8.4:-71032333	None:intergenic
GTTGATGTTTCTTCATGATG+AGG	0.536446	8.4:-71032754	None:intergenic
AAGGTTGTTTGGTGTGAACA+TGG	0.542303	8.4:+71032648	MS.gene81079:CDS
TTTAGTTTCCCAACATCACT+TGG	0.546847	8.4:-71031863	None:intergenic
GATTCAACATCAAATGAGAA+AGG	0.548994	8.4:+71031932	MS.gene81079:CDS
AACATCAACAAGATTTGAAG+AGG	0.552072	8.4:+71032768	MS.gene81079:CDS
AAATTCATCTGATTGTGTAA+GGG	0.552187	8.4:-71032334	None:intergenic
AGTGATGGTACTATTGAAGA+AGG	0.553751	8.4:-71032715	None:intergenic
ACCTTCAAATGTTGAAGTGA+TGG	0.554721	8.4:-71032730	None:intergenic
TTTCCATTTCATCAATATGG+TGG	0.556128	8.4:+71032370	MS.gene81079:CDS
TTTGGTGTGAACATGGAGTG+TGG	0.563933	8.4:+71032655	MS.gene81079:CDS
GCTATGTCATGACAAAAGGT+TGG	0.564346	8.4:+71032029	MS.gene81079:CDS
GTGAAAAGTGTTGCTGATGA+AGG	0.570944	8.4:-71032187	None:intergenic
GTTTCATTTCAACGCGGCGT+CGG	0.571504	8.4:+71032094	MS.gene81079:CDS
TGAGGCATTGATGATGGTGC+TGG	0.585946	8.4:-71032463	None:intergenic
AGTACAAGACAGCAACAAGA+AGG	0.600583	8.4:+71032496	MS.gene81079:CDS
CAATATTCTATTAGATGGGG+AGG	0.609587	8.4:+71032235	MS.gene81079:CDS
AGACAGCAACAAGAAGGAGG+AGG	0.619946	8.4:+71032502	MS.gene81079:CDS
TTCCTTATCCAACACCACAA+AGG	0.633231	8.4:+71032281	MS.gene81079:CDS
ACAAGACAGCAACAAGAAGG+AGG	0.633565	8.4:+71032499	MS.gene81079:CDS
CAACAATATTCTATTAGATG+GGG	0.645043	8.4:+71032232	MS.gene81079:CDS
GCACCATCATCAATGCCTCA+AGG	0.646120	8.4:+71032466	MS.gene81079:CDS
TCTCATTATCATCATCACCA+TGG	0.646213	8.4:+71032571	MS.gene81079:CDS
CTTGTACTCAAGCTTCCTTG+AGG	0.650771	8.4:-71032481	None:intergenic
GGTGTGAACATGGAGTGTGG+TGG	0.666596	8.4:+71032658	MS.gene81079:CDS
GACATTGTTTCATTTCAACG+CGG	0.724243	8.4:+71032088	MS.gene81079:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACAACAATATTCTATTAGA+TGG	+	chr8.4:71032230-71032249	MS.gene81079:CDS	20.0%
!!	ACAACAATATTCTATTAGAT+GGG	+	chr8.4:71032231-71032250	MS.gene81079:CDS	20.0%
!!!	ATAGAATATTGTTGTTGATT+AGG	-	chr8.4:71032226-71032245	None:intergenic	20.0%
!!!	GTTTTTTCTCTTTAACAAAA+CGG	-	chr8.4:71032057-71032076	None:intergenic	20.0%
!	AAAATTCATCTGATTGTGTA+AGG	-	chr8.4:71032338-71032357	None:intergenic	25.0%
!	AAATTCATCTGATTGTGTAA+GGG	-	chr8.4:71032337-71032356	None:intergenic	25.0%
!	AAGATAGAAATGGAAAATTG+TGG	+	chr8.4:71031972-71031991	MS.gene81079:CDS	25.0%
!	ATGTTTCCATTTCATCAATA+TGG	+	chr8.4:71032367-71032386	MS.gene81079:CDS	25.0%
!	CAACAATATTCTATTAGATG+GGG	+	chr8.4:71032232-71032251	MS.gene81079:CDS	25.0%
!	CATTACTAGTTAAATTTCCA+TGG	-	chr8.4:71032591-71032610	None:intergenic	25.0%
!	CTCATATAAAAAACTGAACT+TGG	-	chr8.4:71032436-71032455	None:intergenic	25.0%
!!!	CTGAATTTTGAAGATAGAAA+TGG	+	chr8.4:71031962-71031981	MS.gene81079:CDS	25.0%
	AAAGAGAAAAAACTTGATGC+TGG	+	chr8.4:71032064-71032083	MS.gene81079:CDS	30.0%
	AACATCAACAAGATTTGAAG+AGG	+	chr8.4:71032768-71032787	MS.gene81079:CDS	30.0%
	AATTCATCTGATTGTGTAAG+GGG	-	chr8.4:71032336-71032355	None:intergenic	30.0%
	ATAGGTTGTTTATAGATTGG+AGG	+	chr8.4:71032131-71032150	MS.gene81079:CDS	30.0%
	GATTCAACATCAAATGAGAA+AGG	+	chr8.4:71031932-71031951	MS.gene81079:CDS	30.0%
	GGAGATTTAGATACTCTTAT+TGG	+	chr8.4:71031993-71032012	MS.gene81079:CDS	30.0%
	TCATTTGATGTTGAATCAAG+TGG	-	chr8.4:71031929-71031948	None:intergenic	30.0%
	TTCAACAAGTGATGATAACT+TGG	+	chr8.4:71032687-71032706	MS.gene81079:CDS	30.0%
	TTTCCATTTCATCAATATGG+TGG	+	chr8.4:71032370-71032389	MS.gene81079:CDS	30.0%
!	GAAGAAGCTTCAATGATTTT+TGG	+	chr8.4:71032802-71032821	MS.gene81079:CDS	30.0%
!	TGATGATGATAATGAGAAAC+AGG	-	chr8.4:71032568-71032587	None:intergenic	30.0%
!	TGTTGATTAGGAAGAAAGAA+AGG	-	chr8.4:71032214-71032233	None:intergenic	30.0%
!!	TACTTTTCAGCATGTTGTTT+TGG	-	chr8.4:71031902-71031921	None:intergenic	30.0%
!!!	GTTGTTTTGGTATAACCAAA+CGG	-	chr8.4:71031889-71031908	None:intergenic	30.0%
	ACCATCACTTCAACATTTGA+AGG	+	chr8.4:71032729-71032748	MS.gene81079:CDS	35.0%
	ACCTTCAAATGTTGAAGTGA+TGG	-	chr8.4:71032733-71032752	None:intergenic	35.0%
	AGTGATGGTACTATTGAAGA+AGG	-	chr8.4:71032718-71032737	None:intergenic	35.0%
	CAAAGCTATGTCATGACAAA+AGG	+	chr8.4:71032025-71032044	MS.gene81079:CDS	35.0%
	CAATATTCTATTAGATGGGG+AGG	+	chr8.4:71032235-71032254	MS.gene81079:CDS	35.0%
	GACATTGTTTCATTTCAACG+CGG	+	chr8.4:71032088-71032107	MS.gene81079:CDS	35.0%
	GCAAAAAGGTTAAGGTTGTT+TGG	+	chr8.4:71032637-71032656	MS.gene81079:CDS	35.0%
	GCTACTACTAGTACTACTAA+TGG	+	chr8.4:71032610-71032629	MS.gene81079:CDS	35.0%
	GGCATAGGTTGTTTATAGAT+TGG	+	chr8.4:71032128-71032147	MS.gene81079:CDS	35.0%
	GTTGATGTTTCTTCATGATG+AGG	-	chr8.4:71032757-71032776	None:intergenic	35.0%
	TCTCATTATCATCATCACCA+TGG	+	chr8.4:71032571-71032590	MS.gene81079:CDS	35.0%
	TTGTAACACCAAGTGATGTT+GGG	+	chr8.4:71031855-71031874	MS.gene81079:CDS	35.0%
!	CTTTTGTCATGACATAGCTT+TGG	-	chr8.4:71032027-71032046	None:intergenic	35.0%
!	TTTAGTTTCCCAACATCACT+TGG	-	chr8.4:71031866-71031885	None:intergenic	35.0%
	AGTACAAGACAGCAACAAGA+AGG	+	chr8.4:71032496-71032515	MS.gene81079:CDS	40.0%
	CCACCACCATATTGATGAAA+TGG	-	chr8.4:71032376-71032395	None:intergenic	40.0%
	CCATTTCATCAATATGGTGG+TGG	+	chr8.4:71032373-71032392	MS.gene81079:CDS	40.0%
	GCTATGTCATGACAAAAGGT+TGG	+	chr8.4:71032029-71032048	MS.gene81079:CDS	40.0%
	GTTGTAACACCAAGTGATGT+TGG	+	chr8.4:71031854-71031873	MS.gene81079:CDS	40.0%
	TGCTGATGTTGTAACCTTTG+TGG	-	chr8.4:71032298-71032317	None:intergenic	40.0%
	TGTTGGGAAACTAAACCGTT+TGG	+	chr8.4:71031871-71031890	MS.gene81079:CDS	40.0%
	TGTTGTAACCTTTGTGGTGT+TGG	-	chr8.4:71032292-71032311	None:intergenic	40.0%
	TTCCTTATCCAACACCACAA+AGG	+	chr8.4:71032281-71032300	MS.gene81079:CDS	40.0%
!	AACCTTTGTGGTGTTGGATA+AGG	-	chr8.4:71032286-71032305	None:intergenic	40.0%
!!	AAGGTTGTTTGGTGTGAACA+TGG	+	chr8.4:71032648-71032667	MS.gene81079:CDS	40.0%
!!	ATGGTGCTGCAAAAAGGTTA+AGG	+	chr8.4:71032629-71032648	MS.gene81079:CDS	40.0%
!!	CTACTAATGGTGCTGCAAAA+AGG	+	chr8.4:71032623-71032642	MS.gene81079:CDS	40.0%
!!	GTGAAAAGTGTTGCTGATGA+AGG	-	chr8.4:71032190-71032209	None:intergenic	40.0%
	ACAAGACAGCAACAAGAAGG+AGG	+	chr8.4:71032499-71032518	MS.gene81079:CDS	45.0%
	CTTGTACTCAAGCTTCCTTG+AGG	-	chr8.4:71032484-71032503	None:intergenic	45.0%
	TCGGCGAATTGTTTAGGCAT+AGG	+	chr8.4:71032113-71032132	MS.gene81079:CDS	45.0%
!	TTTGGTGTGAACATGGAGTG+TGG	+	chr8.4:71032655-71032674	MS.gene81079:CDS	45.0%
!!	CTTCCTTGAGGCATTGATGA+TGG	-	chr8.4:71032472-71032491	None:intergenic	45.0%
	AGACAGCAACAAGAAGGAGG+AGG	+	chr8.4:71032502-71032521	MS.gene81079:CDS	50.0%
	GCACCATCATCAATGCCTCA+AGG	+	chr8.4:71032466-71032485	MS.gene81079:CDS	50.0%
	GTTTCATTTCAACGCGGCGT+CGG	+	chr8.4:71032094-71032113	MS.gene81079:CDS	50.0%
!!	TGAGGCATTGATGATGGTGC+TGG	-	chr8.4:71032466-71032485	None:intergenic	50.0%
	CAACAAGAAGGAGGAGGAGG+AGG	+	chr8.4:71032508-71032527	MS.gene81079:CDS	55.0%
	CAGCAACAAGAAGGAGGAGG+AGG	+	chr8.4:71032505-71032524	MS.gene81079:CDS	55.0%
	GGTGTGAACATGGAGTGTGG+TGG	+	chr8.4:71032658-71032677	MS.gene81079:CDS	55.0%
!!	GCGGCGTCGGCGAATTGTTT+AGG	+	chr8.4:71032107-71032126	MS.gene81079:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	71031842	71032867	71031842	ID=MS.gene81079
chr8.4	mRNA	71031842	71032867	71031842	ID=MS.gene81079.t1;Parent=MS.gene81079
chr8.4	exon	71031842	71032867	71031842	ID=MS.gene81079.t1.exon1;Parent=MS.gene81079.t1
chr8.4	CDS	71031842	71032867	71031842	ID=cds.MS.gene81079.t1;Parent=MS.gene81079.t1

Gene Sequence

>MS.gene81079

ATGTTTGACAAAGTTGTAACACCAAGTGATGTTGGGAAACTAAACCGTTTGGTTATACCAAAACAACATGCTGAAAAGTATTTTCCACTTGATTCAACATCAAATGAGAAAGGTCTTCTTCTGAATTTTGAAGATAGAAATGGAAAATTGTGGAGATTTAGATACTCTTATTGGAACAGTAGCCAAAGCTATGTCATGACAAAAGGTTGGAGCCGTTTTGTTAAAGAGAAAAAACTTGATGCTGGTGACATTGTTTCATTTCAACGCGGCGTCGGCGAATTGTTTAGGCATAGGTTGTTTATAGATTGGAGGAGAAGATCTAATCATAATCATCATAATATTGATCCTTCATCAGCAACACTTTTCACTCCTTTCTTTCTTCCTAATCAACAACAATATTCTATTAGATGGGGAGGTGCTAATAGTAGATTTTACTCTCTTCCTTATCCAACACCACAAAGGTTACAACATCAGCAACAAAATCATCATGACCCCTTACACAATCAGATGAATTTTAATCATAACATGTTTCCATTTCATCAATATGGTGGTGGAAATGTGAATCATCAATACAATTTTCATCATCATGATCCAAGTTCAGTTTTTTATATGAGATCATTACCAGCACCATCATCAATGCCTCAAGGAAGCTTGAGTACAAGACAGCAACAAGAAGGAGGAGGAGGAGGAAGCAATGTCTCAAACATGATTATTGATTCTGTTCCTGTTTCTCATTATCATCATCACCATGGAAATTTAACTAGTAATGCTACTACTAGTACTACTAATGGTGCTGCAAAAAGGTTAAGGTTGTTTGGTGTGAACATGGAGTGTGGTGGTTCTTCTTCAACAAGTGATGATAACTTGGCTTCTCCTTCTTCAATAGTACCATCACTTCAACATTTGAAGGTACCTCATCATGAAGAAACATCAACAAGATTTGAAGAGGATAAGAGAAGAGAAGAAGCTTCAATGATTTTTGGTTTAGATACTTCTTTGCAATATCATAATTACCAACAACAATGA

Protein sequence

>MS.gene81079.t1

MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELFRHRLFIDWRRRSNHNHHNIDPSSATLFTPFFLPNQQQYSIRWGGANSRFYSLPYPTPQRLQHQQQNHHDPLHNQMNFNHNMFPFHQYGGGNVNHQYNFHHHDPSSVFYMRSLPAPSSMPQGSLSTRQQQEGGGGGSNVSNMIIDSVPVSHYHHHHGNLTSNATTSTTNGAAKRLRLFGVNMECGGSSSTSDDNLASPSSIVPSLQHLKVPHHEETSTRFEEDKRREEASMIFGLDTSLQYHNYQQQ