Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82306.t1 | XP_024633888.1 | 84.7 | 281 | 10 | 3 | 1 | 251 | 1 | 278 | 1.20E-126 | 462.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82306.t1 | P74516 | 49.7 | 157 | 71 | 3 | 68 | 224 | 1 | 149 | 2.2e-33 | 144.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82306.t1 | G7IWJ3 | 84.7 | 281 | 10 | 3 | 1 | 251 | 1 | 278 | 8.3e-127 | 462.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene82306 | 0.803143 | 4.01E-49 | -1.69E-46 |
MS.gene049297 | MS.gene82306 | 0.823619 | 1.26E-53 | -1.69E-46 |
MS.gene04933 | MS.gene82306 | 0.813829 | 2.10E-51 | -1.69E-46 |
MS.gene049758 | MS.gene82306 | 0.825777 | 3.90E-54 | -1.69E-46 |
MS.gene049910 | MS.gene82306 | 0.817138 | 3.85E-52 | -1.69E-46 |
MS.gene050301 | MS.gene82306 | 0.836652 | 8.26E-57 | -1.69E-46 |
MS.gene050319 | MS.gene82306 | -0.810237 | 1.27E-50 | -1.69E-46 |
MS.gene050529 | MS.gene82306 | 0.823329 | 1.47E-53 | -1.69E-46 |
MS.gene050558 | MS.gene82306 | 0.82746 | 1.55E-54 | -1.69E-46 |
MS.gene050642 | MS.gene82306 | 0.803562 | 3.29E-49 | -1.69E-46 |
MS.gene050820 | MS.gene82306 | 0.843158 | 1.66E-58 | -1.69E-46 |
MS.gene051860 | MS.gene82306 | 0.833474 | 5.22E-56 | -1.69E-46 |
MS.gene051983 | MS.gene82306 | 0.824871 | 6.38E-54 | -1.69E-46 |
MS.gene052188 | MS.gene82306 | 0.805056 | 1.60E-49 | -1.69E-46 |
MS.gene052253 | MS.gene82306 | 0.815599 | 8.51E-52 | -1.69E-46 |
MS.gene053836 | MS.gene82306 | 0.878141 | 3.57E-69 | -1.69E-46 |
MS.gene053907 | MS.gene82306 | 0.816635 | 5.00E-52 | -1.69E-46 |
MS.gene054183 | MS.gene82306 | 0.811763 | 5.95E-51 | -1.69E-46 |
MS.gene054473 | MS.gene82306 | 0.825746 | 3.96E-54 | -1.69E-46 |
MS.gene054930 | MS.gene82306 | 0.824276 | 8.81E-54 | -1.69E-46 |
MS.gene054942 | MS.gene82306 | 0.821251 | 4.46E-53 | -1.69E-46 |
MS.gene054983 | MS.gene82306 | 0.822789 | 1.96E-53 | -1.69E-46 |
MS.gene055422 | MS.gene82306 | 0.831563 | 1.56E-55 | -1.69E-46 |
MS.gene055428 | MS.gene82306 | 0.823811 | 1.13E-53 | -1.69E-46 |
MS.gene055604 | MS.gene82306 | 0.808896 | 2.47E-50 | -1.69E-46 |
MS.gene056612 | MS.gene82306 | 0.820024 | 8.53E-53 | -1.69E-46 |
MS.gene056659 | MS.gene82306 | 0.825566 | 4.37E-54 | -1.69E-46 |
MS.gene056723 | MS.gene82306 | 0.80713 | 5.88E-50 | -1.69E-46 |
MS.gene056979 | MS.gene82306 | 0.820979 | 5.15E-53 | -1.69E-46 |
MS.gene05702 | MS.gene82306 | 0.822038 | 2.93E-53 | -1.69E-46 |
MS.gene057121 | MS.gene82306 | 0.878792 | 2.11E-69 | -1.69E-46 |
MS.gene057245 | MS.gene82306 | 0.804235 | 2.38E-49 | -1.69E-46 |
MS.gene057439 | MS.gene82306 | 0.801046 | 1.08E-48 | -1.69E-46 |
MS.gene057469 | MS.gene82306 | 0.802334 | 5.89E-49 | -1.69E-46 |
MS.gene058002 | MS.gene82306 | 0.854865 | 9.26E-62 | -1.69E-46 |
MS.gene05811 | MS.gene82306 | 0.811622 | 6.38E-51 | -1.69E-46 |
MS.gene058142 | MS.gene82306 | 0.861991 | 6.95E-64 | -1.69E-46 |
MS.gene058233 | MS.gene82306 | 0.808559 | 2.92E-50 | -1.69E-46 |
MS.gene058660 | MS.gene82306 | 0.821861 | 3.22E-53 | -1.69E-46 |
MS.gene058710 | MS.gene82306 | 0.834514 | 2.87E-56 | -1.69E-46 |
MS.gene058749 | MS.gene82306 | 0.821576 | 3.75E-53 | -1.69E-46 |
MS.gene05886 | MS.gene82306 | 0.814727 | 1.33E-51 | -1.69E-46 |
MS.gene05907 | MS.gene82306 | 0.81459 | 1.43E-51 | -1.69E-46 |
MS.gene059285 | MS.gene82306 | 0.824949 | 6.12E-54 | -1.69E-46 |
MS.gene059597 | MS.gene82306 | 0.809426 | 1.90E-50 | -1.69E-46 |
MS.gene05984 | MS.gene82306 | 0.833086 | 6.53E-56 | -1.69E-46 |
MS.gene061049 | MS.gene82306 | 0.843433 | 1.41E-58 | -1.69E-46 |
MS.gene061114 | MS.gene82306 | -0.829115 | 6.16E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82306.t1 | MTR_3g027870 | 84.698 | 281 | 10 | 3 | 1 | 251 | 1 | 278 | 1.71e-163 | 453 |
MS.gene82306.t1 | MTR_3g027870 | 70.463 | 281 | 10 | 4 | 1 | 251 | 1 | 238 | 1.01e-128 | 364 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82306.t1 | AT5G26880 | 74.272 | 206 | 52 | 1 | 45 | 250 | 58 | 262 | 7.33e-115 | 330 |
Find 52 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTAAAATTCACGATTCT+TGG | 0.300968 | 3.4:+21858361 | MS.gene82306:CDS |
CTGTTGGACTACACTTAGTT+GGG | 0.340052 | 3.4:+21856969 | MS.gene82306:CDS |
TTGCAATCTAACAACGCTTC+AGG | 0.351137 | 3.4:-21859143 | None:intergenic |
CAATCCAGCTCGCTTTAGTT+TGG | 0.371247 | 3.4:-21857325 | None:intergenic |
TGTTGTTCTTGGTAGATTCC+AGG | 0.384664 | 3.4:+21856908 | MS.gene82306:intron |
GCAATGCAGCCAGTGTTTCC+TGG | 0.391133 | 3.4:-21856926 | None:intergenic |
CTGACATATGTTTCAACCAT+TGG | 0.414032 | 3.4:-21859200 | None:intergenic |
GTTTGGATCGAAAATGAAAA+GGG | 0.415927 | 3.4:-21853119 | None:intergenic |
TGTTAAAATTCACGATTCTT+GGG | 0.421970 | 3.4:+21858362 | MS.gene82306:CDS |
AGTTGTGCTTGTTTCACCTC+AGG | 0.425774 | 3.4:+21853547 | MS.gene82306:CDS |
CAAACTAAAGCGAGCTGGAT+TGG | 0.426885 | 3.4:+21857326 | MS.gene82306:CDS |
TTATTTGGTGCTGAAACTAC+TGG | 0.427265 | 3.4:+21859113 | MS.gene82306:CDS |
TCATCCACCTTATATCCTAA+TGG | 0.433769 | 3.4:-21857300 | None:intergenic |
AGTCTCAAGGCAGCAGGAAA+TGG | 0.436330 | 3.4:-21853063 | None:intergenic |
CTGCTGCTGCTGATAGGTTG+AGG | 0.439569 | 3.4:-21853092 | None:intergenic |
TGCTGCTGCTGATAGGTTGA+GGG | 0.443253 | 3.4:-21853091 | None:intergenic |
GGTTTGCTGCTGCTGCTGAT+AGG | 0.443334 | 3.4:-21853098 | None:intergenic |
GCTGTTGGACTACACTTAGT+TGG | 0.447539 | 3.4:+21856968 | MS.gene82306:CDS |
AGCGAGCTGGATTGGACTAC+TGG | 0.454007 | 3.4:+21857334 | MS.gene82306:CDS |
TTGATAGTTCCACCACCATA+TGG | 0.454641 | 3.4:-21859173 | None:intergenic |
AGTTTGGATCGAAAATGAAA+AGG | 0.457319 | 3.4:-21853120 | None:intergenic |
TGACATATGTTTCAACCATT+GGG | 0.461962 | 3.4:-21859199 | None:intergenic |
TTGCCACATGGTGTTGGAGA+GGG | 0.501044 | 3.4:+21853491 | MS.gene82306:CDS |
AAAATTCACGATTCTTGGGA+AGG | 0.519743 | 3.4:+21858366 | MS.gene82306:CDS |
GAGAATGAGATAAAGAAGGA+AGG | 0.522409 | 3.4:+21853464 | MS.gene82306:CDS |
TGGTACAGGAAGGTGAAAAG+AGG | 0.523032 | 3.4:+21858490 | MS.gene82306:intron |
GGTAGTTTGCCACATGGTGT+TGG | 0.523607 | 3.4:+21853485 | MS.gene82306:CDS |
GATTGCAAAACTGAACCATA+TGG | 0.527813 | 3.4:+21859158 | MS.gene82306:CDS |
CAATGGTTGAAACATATGTC+AGG | 0.541341 | 3.4:+21859201 | MS.gene82306:CDS |
GATTTCAGTCTCAAGGCAGC+AGG | 0.543360 | 3.4:-21853069 | None:intergenic |
ACATGTGCAGCATCAGCTGT+TGG | 0.543758 | 3.4:+21856953 | MS.gene82306:CDS |
TGCCACATGGTGTTGGAGAG+GGG | 0.544512 | 3.4:+21853492 | MS.gene82306:CDS |
TACTGAGAATGAGATAAAGA+AGG | 0.549122 | 3.4:+21853460 | MS.gene82306:CDS |
GTTGCTAGCATTTACAAAGA+GGG | 0.563609 | 3.4:+21858512 | MS.gene82306:CDS |
GTTGAGGGATTTCAGTCTCA+AGG | 0.564510 | 3.4:-21853076 | None:intergenic |
TTGAATCTATCAGTAAGTGT+TGG | 0.576824 | 3.4:+21859227 | MS.gene82306:CDS |
CAATCTAACAACGCTTCAGG+TGG | 0.577296 | 3.4:-21859140 | None:intergenic |
TGGTAGATTCCAGGAAACAC+TGG | 0.577588 | 3.4:+21856917 | MS.gene82306:intron |
GATACCAAACTAAAGCGAGC+TGG | 0.587642 | 3.4:+21857321 | MS.gene82306:CDS |
GGTTGCTAGCATTTACAAAG+AGG | 0.596965 | 3.4:+21858511 | MS.gene82306:CDS |
TTGCTAGCATTTACAAAGAG+GGG | 0.609702 | 3.4:+21858513 | MS.gene82306:CDS |
GTATCAATACATGTTTCTGA+AGG | 0.615847 | 3.4:-21859302 | None:intergenic |
TGTTGGACTACACTTAGTTG+GGG | 0.616424 | 3.4:+21856970 | MS.gene82306:CDS |
TTTGCCACATGGTGTTGGAG+AGG | 0.620773 | 3.4:+21853490 | MS.gene82306:CDS |
TCAGCCATTAGGATATAAGG+TGG | 0.622589 | 3.4:+21857296 | MS.gene82306:intron |
AGAAACATGTATTGATACTG+AGG | 0.626640 | 3.4:+21859307 | MS.gene82306:CDS |
ATCCCCTCTCCAACACCATG+TGG | 0.662675 | 3.4:-21853494 | None:intergenic |
AACATGTATTGATACTGAGG+AGG | 0.664583 | 3.4:+21859310 | MS.gene82306:CDS |
TGGAACTATCAAGATCCCAA+TGG | 0.684890 | 3.4:+21859184 | MS.gene82306:CDS |
AAAACTGAACCATATGGTGG+TGG | 0.685342 | 3.4:+21859164 | MS.gene82306:CDS |
AAGGAAGGTAGTTTGCCACA+TGG | 0.704326 | 3.4:+21853479 | MS.gene82306:CDS |
TGCAAAACTGAACCATATGG+TGG | 0.723796 | 3.4:+21859161 | MS.gene82306:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGCTTATTAATTTAATT+AGG | + | chr3.4:21855292-21855311 | MS.gene82306:intron | 10.0% |
!! | CAAAAACTTTATAAAATTAA+AGG | + | chr3.4:21854347-21854366 | MS.gene82306:intron | 10.0% |
!!! | AGTTTTTTTATGAATATTAT+CGG | + | chr3.4:21856341-21856360 | MS.gene82306:intron | 10.0% |
!!! | TTTTATAATGAATAAAGAAT+TGG | - | chr3.4:21858694-21858713 | None:intergenic | 10.0% |
!! | AAATGTAATATACTCATATA+CGG | - | chr3.4:21855364-21855383 | None:intergenic | 15.0% |
!! | AAATTTGATACAATACTTAT+AGG | + | chr3.4:21858768-21858787 | MS.gene82306:intron | 15.0% |
!! | AACTGAAATAATAATAATTG+TGG | - | chr3.4:21855451-21855470 | None:intergenic | 15.0% |
!! | AGTAAAATTTAACAAAGTTA+GGG | - | chr3.4:21853767-21853786 | None:intergenic | 15.0% |
!! | ATAGATATAGATAATAAATG+TGG | - | chr3.4:21855389-21855408 | None:intergenic | 15.0% |
!! | ATAGTTATTCGTATATATTT+CGG | - | chr3.4:21853604-21853623 | None:intergenic | 15.0% |
!! | ATATGTTAATAATAGCAATT+TGG | + | chr3.4:21857673-21857692 | MS.gene82306:intron | 15.0% |
!! | ATATTACTTAATGTGTTAAA+CGG | + | chr3.4:21858978-21858997 | MS.gene82306:intron | 15.0% |
!! | TAATTAAAACAACAAAATCA+AGG | - | chr3.4:21853377-21853396 | None:intergenic | 15.0% |
!! | TCAATTGTAAAATTTATAGA+TGG | - | chr3.4:21855684-21855703 | None:intergenic | 15.0% |
!! | TGCTATTATTAACATATATT+AGG | - | chr3.4:21857670-21857689 | None:intergenic | 15.0% |
!!! | ACATCTTATAATGTATATTT+TGG | + | chr3.4:21854443-21854462 | MS.gene82306:intron | 15.0% |
!!! | ATTGATAGTTGTTAAAATAT+AGG | + | chr3.4:21853854-21853873 | MS.gene82306:intron | 15.0% |
!!! | ATTTTATGACTATTTCAAAA+AGG | + | chr3.4:21853740-21853759 | MS.gene82306:intron | 15.0% |
!!! | GCTAATAATTATATTTTTGT+TGG | + | chr3.4:21856179-21856198 | MS.gene82306:intron | 15.0% |
!!! | GTTTTTTCTTTTTTTACTTT+AGG | + | chr3.4:21858816-21858835 | MS.gene82306:intron | 15.0% |
!!! | TAAAGAGTAAATATTCATTT+TGG | - | chr3.4:21854278-21854297 | None:intergenic | 15.0% |
!!! | TAGTTTTTTTTTTTTTTACC+AGG | + | chr3.4:21857609-21857628 | MS.gene82306:intron | 15.0% |
!!! | TATTTTAACAACTATCAATT+TGG | - | chr3.4:21853853-21853872 | None:intergenic | 15.0% |
!!! | TTGATAGTTGTTAAAATATA+GGG | + | chr3.4:21853855-21853874 | MS.gene82306:intron | 15.0% |
!!! | TTGTAATTTTTATATACTCA+GGG | - | chr3.4:21854031-21854050 | None:intergenic | 15.0% |
!!! | TTGTTTTGTTTTTGTTTAAA+TGG | + | chr3.4:21853407-21853426 | MS.gene82306:intron | 15.0% |
!!! | TTTGTAATTTTTATATACTC+AGG | - | chr3.4:21854032-21854051 | None:intergenic | 15.0% |
!!! | TTTGTATTTTTAGAACTATT+GGG | + | chr3.4:21854579-21854598 | MS.gene82306:intron | 15.0% |
!!! | TTTTGTATTTTTAGAACTAT+TGG | + | chr3.4:21854578-21854597 | MS.gene82306:intron | 15.0% |
!!! | TTTTTTTTGAAAACTTTGTA+TGG | + | chr3.4:21853309-21853328 | MS.gene82306:intron | 15.0% |
!! | AATGTAATATACTCATATAC+GGG | - | chr3.4:21855363-21855382 | None:intergenic | 20.0% |
!! | AGATTATGAATATTTCGAAA+AGG | - | chr3.4:21853948-21853967 | None:intergenic | 20.0% |
!! | ATAGTAAGTGGTTAAATATA+GGG | + | chr3.4:21853892-21853911 | MS.gene82306:intron | 20.0% |
!! | ATTGAAATCTTTATCTCATT+TGG | + | chr3.4:21857393-21857412 | MS.gene82306:intron | 20.0% |
!! | CAGTAAAATTTAACAAAGTT+AGG | - | chr3.4:21853768-21853787 | None:intergenic | 20.0% |
!! | CATATATTCAAGTATTCAAA+TGG | - | chr3.4:21853627-21853646 | None:intergenic | 20.0% |
!! | CTGTAATTATTATATTGAGA+GGG | + | chr3.4:21855049-21855068 | MS.gene82306:intron | 20.0% |
!! | CTTCTGTTATTAATTAATCA+TGG | - | chr3.4:21854182-21854201 | None:intergenic | 20.0% |
!! | TAGATGTACTAAATTTGAAA+AGG | - | chr3.4:21858234-21858253 | None:intergenic | 20.0% |
!! | TCGAAATATTCATAATCTTA+GGG | + | chr3.4:21853950-21853969 | MS.gene82306:intron | 20.0% |
!! | TTAATGGAAACAAATATAAC+AGG | - | chr3.4:21858320-21858339 | None:intergenic | 20.0% |
!! | TTCAAAAGAAAATAAAGTCT+TGG | - | chr3.4:21858671-21858690 | None:intergenic | 20.0% |
!! | TTCGAAATATTCATAATCTT+AGG | + | chr3.4:21853949-21853968 | MS.gene82306:intron | 20.0% |
!! | TTGTATTTAATAGTGTATAG+TGG | + | chr3.4:21857168-21857187 | MS.gene82306:intron | 20.0% |
!! | TTGTCTTATGTTAGTTAATT+TGG | + | chr3.4:21854124-21854143 | MS.gene82306:intron | 20.0% |
!! | TTTGATATTTATGTTGTTCT+TGG | + | chr3.4:21856897-21856916 | MS.gene82306:intron | 20.0% |
!!! | AAAACTGTATATAGTTTTTG+AGG | + | chr3.4:21856655-21856674 | MS.gene82306:intron | 20.0% |
!!! | AAGATTTTAGATTATCTGTT+GGG | - | chr3.4:21856080-21856099 | None:intergenic | 20.0% |
!!! | AATTTAGTCTTTGAAATTGT+AGG | + | chr3.4:21854696-21854715 | MS.gene82306:intron | 20.0% |
!!! | TCATAATATTGGTTATTCTT+TGG | - | chr3.4:21856615-21856634 | None:intergenic | 20.0% |
!!! | TGTAATTTTTATATACTCAG+GGG | - | chr3.4:21854030-21854049 | None:intergenic | 20.0% |
!!! | TTAACTTAATTGATAGTAAG+TGG | + | chr3.4:21853880-21853899 | MS.gene82306:intron | 20.0% |
!!! | TTAATTACTGAAGACATTTT+TGG | + | chr3.4:21859338-21859357 | MS.gene82306:CDS | 20.0% |
!!! | TTTTGATAGACCATTAATTA+TGG | + | chr3.4:21859043-21859062 | MS.gene82306:intron | 20.0% |
! | AAAATCTCTCAATTACCAAA+GGG | + | chr3.4:21856871-21856890 | MS.gene82306:intron | 25.0% |
! | AAAATTATTAATGCGAGTAC+AGG | + | chr3.4:21857907-21857926 | MS.gene82306:intron | 25.0% |
! | AAACAATTTCTCTTTACACA+CGG | + | chr3.4:21858011-21858030 | MS.gene82306:intron | 25.0% |
! | AAAGTAAATTTACAGTAGAG+GGG | - | chr3.4:21856826-21856845 | None:intergenic | 25.0% |
! | AAGAACGAAATAAGTAAAAG+TGG | + | chr3.4:21856720-21856739 | MS.gene82306:intron | 25.0% |
! | AAGCATATATGATATATCCA+AGG | - | chr3.4:21857366-21857385 | None:intergenic | 25.0% |
! | AGAACGAAATAAGTAAAAGT+GGG | + | chr3.4:21856721-21856740 | MS.gene82306:intron | 25.0% |
! | AGAGAAATGCTATCATTAAA+GGG | - | chr3.4:21858589-21858608 | None:intergenic | 25.0% |
! | ATAAATATCAAAGAACCCTT+TGG | - | chr3.4:21856889-21856908 | None:intergenic | 25.0% |
! | ATACAAGGAACCATAATTAA+TGG | - | chr3.4:21859056-21859075 | None:intergenic | 25.0% |
! | ATAGTAGGTGGATAAATTTA+GGG | + | chr3.4:21853826-21853845 | MS.gene82306:intron | 25.0% |
! | ATATGATATATCCAAGGATA+CGG | - | chr3.4:21857360-21857379 | None:intergenic | 25.0% |
! | ATTATAGAATGTTATACCTG+AGG | - | chr3.4:21853566-21853585 | None:intergenic | 25.0% |
! | CAAAGTAAATTTACAGTAGA+GGG | - | chr3.4:21856827-21856846 | None:intergenic | 25.0% |
! | CTGTATTAAAATTGAGTACA+AGG | + | chr3.4:21856681-21856700 | MS.gene82306:intron | 25.0% |
! | CTTATTAATTTAATTAGGCC+GGG | + | chr3.4:21855297-21855316 | MS.gene82306:intron | 25.0% |
! | GATAGTAAGTGGTTAAATAT+AGG | + | chr3.4:21853891-21853910 | MS.gene82306:intron | 25.0% |
! | GCTGTAATTATTATATTGAG+AGG | + | chr3.4:21855048-21855067 | MS.gene82306:intron | 25.0% |
! | GCTTATTAATTTAATTAGGC+CGG | + | chr3.4:21855296-21855315 | MS.gene82306:intron | 25.0% |
! | TAAAATCTCTCAATTACCAA+AGG | + | chr3.4:21856870-21856889 | MS.gene82306:intron | 25.0% |
! | TAATAATCATACTTGACCTT+AGG | - | chr3.4:21855607-21855626 | None:intergenic | 25.0% |
! | TAATTATTATATTGAGAGGG+CGG | + | chr3.4:21855052-21855071 | MS.gene82306:intron | 25.0% |
! | TAGAGAAATGCTATCATTAA+AGG | - | chr3.4:21858590-21858609 | None:intergenic | 25.0% |
! | TATCTGCAAATTTGTGTTAA+TGG | - | chr3.4:21858336-21858355 | None:intergenic | 25.0% |
! | TCAAACCAAACAAATTCTTA+TGG | + | chr3.4:21858717-21858736 | MS.gene82306:intron | 25.0% |
! | TGAAAAAATTGAACTGTGAT+GGG | + | chr3.4:21857528-21857547 | MS.gene82306:intron | 25.0% |
! | TGAAATTTGTAACACAAACT+AGG | + | chr3.4:21855801-21855820 | MS.gene82306:intron | 25.0% |
! | TGATACAATACTTATAGGAA+TGG | + | chr3.4:21858773-21858792 | MS.gene82306:intron | 25.0% |
! | TGTTAAAATTCACGATTCTT+GGG | + | chr3.4:21858362-21858381 | MS.gene82306:CDS | 25.0% |
! | TTAGATGAAACTATTAGATC+AGG | - | chr3.4:21858266-21858285 | None:intergenic | 25.0% |
! | TTGTTAAAATTCACGATTCT+TGG | + | chr3.4:21858361-21858380 | MS.gene82306:CDS | 25.0% |
! | TTTATGAATATTATCGGAGT+TGG | + | chr3.4:21856347-21856366 | MS.gene82306:intron | 25.0% |
! | TTTCCATATATTGTTTGCAA+CGG | - | chr3.4:21858936-21858955 | None:intergenic | 25.0% |
!! | AAAGGCGATTATCTTTTATT+TGG | + | chr3.4:21859098-21859117 | MS.gene82306:CDS | 25.0% |
!! | AAGTTGTCATATTGATTAAC+TGG | + | chr3.4:21856226-21856245 | MS.gene82306:intron | 25.0% |
!! | AGTTGTCATATTGATTAACT+GGG | + | chr3.4:21856227-21856246 | MS.gene82306:intron | 25.0% |
!! | ATCATCCATAAGAATTTGTT+TGG | - | chr3.4:21858725-21858744 | None:intergenic | 25.0% |
!! | GAAGATTTTAGATTATCTGT+TGG | - | chr3.4:21856081-21856100 | None:intergenic | 25.0% |
!! | GACATTTCAGTTTTCTATTA+AGG | + | chr3.4:21857735-21857754 | MS.gene82306:intron | 25.0% |
!! | GTTATCATTTAAGACTCTTA+TGG | + | chr3.4:21855539-21855558 | MS.gene82306:intron | 25.0% |
!! | TATTTCAAAATTGTTGGTGA+TGG | + | chr3.4:21858854-21858873 | MS.gene82306:intron | 25.0% |
!! | TGTTGTTCAGTTTGATTTAA+CGG | - | chr3.4:21857507-21857526 | None:intergenic | 25.0% |
!!! | ACAATTTTGATTCTTGGTTA+AGG | + | chr3.4:21854991-21855010 | MS.gene82306:intron | 25.0% |
!!! | CAAAAGACAATTTTGATTCT+TGG | + | chr3.4:21854985-21855004 | MS.gene82306:intron | 25.0% |
!!! | GTATATTTTGGTAGTTTGTT+TGG | + | chr3.4:21854455-21854474 | MS.gene82306:intron | 25.0% |
!!! | TCTTACAGTTTTAGAGAAAT+TGG | + | chr3.4:21854786-21854805 | MS.gene82306:intron | 25.0% |
!!! | TGTTTAAATGGTGTTATAGA+TGG | + | chr3.4:21853419-21853438 | MS.gene82306:intron | 25.0% |
AACTCCTTAATACGCTAAAA+AGG | + | chr3.4:21856580-21856599 | MS.gene82306:intron | 30.0% | |
AATTGTTTACTTGTTCCGAT+TGG | - | chr3.4:21857999-21858018 | None:intergenic | 30.0% | |
ACAGAAACTCAAGAATAATC+AGG | - | chr3.4:21855661-21855680 | None:intergenic | 30.0% | |
ACTAGCAAAAGACAAATTCA+TGG | - | chr3.4:21854060-21854079 | None:intergenic | 30.0% | |
ACTCATTTATTAAACGAGCT+AGG | - | chr3.4:21855255-21855274 | None:intergenic | 30.0% | |
AGAAATCATAATCCTCTCAT+GGG | + | chr3.4:21854933-21854952 | MS.gene82306:intron | 30.0% | |
AGAATATGCTAAAGACTGAA+TGG | + | chr3.4:21853803-21853822 | MS.gene82306:intron | 30.0% | |
AGCAGTTGTATGATAAATCA+TGG | + | chr3.4:21854829-21854848 | MS.gene82306:intron | 30.0% | |
AGGAAGTTAATAGCATCAAA+AGG | - | chr3.4:21858062-21858081 | None:intergenic | 30.0% | |
AGTCTTGGATATTTACTTTC+TGG | - | chr3.4:21858656-21858675 | None:intergenic | 30.0% | |
AGTTTGGATCGAAAATGAAA+AGG | - | chr3.4:21853123-21853142 | None:intergenic | 30.0% | |
ATTAAGGACTAAAGTAGTTC+CGG | + | chr3.4:21857751-21857770 | MS.gene82306:intron | 30.0% | |
ATTGTGGTATGAGAATTTGA+AGG | - | chr3.4:21855435-21855454 | None:intergenic | 30.0% | |
CAACGGATAAAACTTAGATA+TGG | - | chr3.4:21858919-21858938 | None:intergenic | 30.0% | |
CCAAAGTAAATTTACAGTAG+AGG | - | chr3.4:21856828-21856847 | None:intergenic | 30.0% | |
CCTCTACTGTAAATTTACTT+TGG | + | chr3.4:21856825-21856844 | MS.gene82306:intron | 30.0% | |
CGTATATATTTCGGTAAATC+TGG | - | chr3.4:21853595-21853614 | None:intergenic | 30.0% | |
CTGAAAAAATTGAACTGTGA+TGG | + | chr3.4:21857527-21857546 | MS.gene82306:intron | 30.0% | |
CTGACACTTTATTAGAGTTA+CGG | + | chr3.4:21853921-21853940 | MS.gene82306:intron | 30.0% | |
CTTAAAATAAAGCCTTTGAC+AGG | + | chr3.4:21855876-21855895 | MS.gene82306:intron | 30.0% | |
GAAAAGATAGAGGAATACAA+AGG | - | chr3.4:21857278-21857297 | None:intergenic | 30.0% | |
GAACGAAATAAGTAAAAGTG+GGG | + | chr3.4:21856722-21856741 | MS.gene82306:intron | 30.0% | |
GACAATGCATAAAATATGCA+AGG | + | chr3.4:21856015-21856034 | MS.gene82306:intron | 30.0% | |
GACTGTGATTCACATATAAA+GGG | + | chr3.4:21854611-21854630 | MS.gene82306:intron | 30.0% | |
GAGAAAATAATCTCTTCTCT+TGG | - | chr3.4:21856467-21856486 | None:intergenic | 30.0% | |
GATAGTAGGTGGATAAATTT+AGG | + | chr3.4:21853825-21853844 | MS.gene82306:intron | 30.0% | |
GTTTGGATCGAAAATGAAAA+GGG | - | chr3.4:21853122-21853141 | None:intergenic | 30.0% | |
TAAATGACATCATAAGAGAC+AGG | - | chr3.4:21858632-21858651 | None:intergenic | 30.0% | |
TAATATACTCATATACGGGT+CGG | - | chr3.4:21855359-21855378 | None:intergenic | 30.0% | |
TACAAAGTCACAGACTAATT+TGG | - | chr3.4:21853697-21853716 | None:intergenic | 30.0% | |
TACAAATCGAATATTAAGCC+TGG | - | chr3.4:21857630-21857649 | None:intergenic | 30.0% | |
TACTGAGAATGAGATAAAGA+AGG | + | chr3.4:21853460-21853479 | MS.gene82306:CDS | 30.0% | |
TAGAAATCATAATCCTCTCA+TGG | + | chr3.4:21854932-21854951 | MS.gene82306:intron | 30.0% | |
TATCCGTTGCAAACAATATA+TGG | + | chr3.4:21858930-21858949 | MS.gene82306:intron | 30.0% | |
TCGTCATATTGCAATATTGT+TGG | - | chr3.4:21858748-21858767 | None:intergenic | 30.0% | |
TCGTTCACAAAGAATTAGTT+TGG | + | chr3.4:21857702-21857721 | MS.gene82306:intron | 30.0% | |
TGACATATGTTTCAACCATT+GGG | - | chr3.4:21859202-21859221 | None:intergenic | 30.0% | |
TGACTGTGATTCACATATAA+AGG | + | chr3.4:21854610-21854629 | MS.gene82306:intron | 30.0% | |
TGATAAATCATGGAATTGCA+AGG | + | chr3.4:21854839-21854858 | MS.gene82306:intron | 30.0% | |
TGTAGTTCAGTTTAACAGTT+CGG | + | chr3.4:21857584-21857603 | MS.gene82306:intron | 30.0% | |
TGTGAATGTATACATGCTTA+AGG | + | chr3.4:21856203-21856222 | MS.gene82306:intron | 30.0% | |
TTCCAAAACAAGGCAATATA+AGG | + | chr3.4:21859016-21859035 | MS.gene82306:intron | 30.0% | |
TTGAATCTATCAGTAAGTGT+TGG | + | chr3.4:21859227-21859246 | MS.gene82306:CDS | 30.0% | |
TTGACGAAAAAGAAAGAGTT+TGG | - | chr3.4:21853139-21853158 | None:intergenic | 30.0% | |
TTGATTCTTGGTTAAGGATT+GGG | + | chr3.4:21854997-21855016 | MS.gene82306:intron | 30.0% | |
TTTGATTCTTGGTTAAGGAT+TGG | + | chr3.4:21854996-21855015 | MS.gene82306:intron | 30.0% | |
! | AAAAACTTTTCTACCATGCA+GGG | + | chr3.4:21857435-21857454 | MS.gene82306:intron | 30.0% |
! | AAGTATGTCGTTTGTTAGTT+TGG | + | chr3.4:21854093-21854112 | MS.gene82306:intron | 30.0% |
! | AGAAACATGTATTGATACTG+AGG | + | chr3.4:21859307-21859326 | MS.gene82306:CDS | 30.0% |
! | AGAATTAGTTTGGTTCGAAA+AGG | + | chr3.4:21857712-21857731 | MS.gene82306:intron | 30.0% |
! | ATGGAATTGCAAGGTTATTT+TGG | + | chr3.4:21854848-21854867 | MS.gene82306:intron | 30.0% |
! | ATTCCAGGAACTTAACTTTT+AGG | - | chr3.4:21858428-21858447 | None:intergenic | 30.0% |
! | GAATTAGTTTGGTTCGAAAA+GGG | + | chr3.4:21857713-21857732 | MS.gene82306:intron | 30.0% |
! | GTATCAATACATGTTTCTGA+AGG | - | chr3.4:21859305-21859324 | None:intergenic | 30.0% |
! | GTTGTCATATTGATTAACTG+GGG | + | chr3.4:21856228-21856247 | MS.gene82306:intron | 30.0% |
! | TCACGCTATTTCAAAATTGT+TGG | + | chr3.4:21858848-21858867 | MS.gene82306:intron | 30.0% |
! | TTTTCAGCCATTAGGATATA+AGG | + | chr3.4:21857293-21857312 | MS.gene82306:intron | 30.0% |
!! | AAACTTAGATATGGTGCTAT+AGG | - | chr3.4:21858910-21858929 | None:intergenic | 30.0% |
!! | AAGTCCTTTTTAGCGTATTA+AGG | - | chr3.4:21856587-21856606 | None:intergenic | 30.0% |
!! | TTGATTTGTGTGAACTGTTA+AGG | + | chr3.4:21855566-21855585 | MS.gene82306:intron | 30.0% |
!! | TTTAACGGATCGTAAGTTTT+TGG | - | chr3.4:21857492-21857511 | None:intergenic | 30.0% |
!!! | CTTTTTTATAAGCATAAGCC+CGG | - | chr3.4:21855318-21855337 | None:intergenic | 30.0% |
!!! | TCAAAGGCTTTATTTTAAGC+CGG | - | chr3.4:21855875-21855894 | None:intergenic | 30.0% |
!!! | TCGTGATTATTTTTTGCAAC+AGG | + | chr3.4:21858392-21858411 | MS.gene82306:CDS | 30.0% |
!!! | TTCCTTATATTGCCTTGTTT+TGG | - | chr3.4:21859021-21859040 | None:intergenic | 30.0% |
AAAATTCACGATTCTTGGGA+AGG | + | chr3.4:21858366-21858385 | MS.gene82306:CDS | 35.0% | |
AAAGTCACAGACTAATTTGG+TGG | - | chr3.4:21853694-21853713 | None:intergenic | 35.0% | |
AACTTCGTCCCATTGTAAAA+GGG | - | chr3.4:21857942-21857961 | None:intergenic | 35.0% | |
AAGTTTGTGCTATAGGATTG+TGG | + | chr3.4:21856272-21856291 | MS.gene82306:intron | 35.0% | |
AATAACAGAAGACACACTCA+AGG | + | chr3.4:21854191-21854210 | MS.gene82306:intron | 35.0% | |
ACCGAAAATAACCAAACTGT+GGG | - | chr3.4:21857565-21857584 | None:intergenic | 35.0% | |
ACTAGTAGACTGTTCGTTAA+TGG | - | chr3.4:21858105-21858124 | None:intergenic | 35.0% | |
ATAAACCACGATAGACAGAT+AGG | - | chr3.4:21858135-21858154 | None:intergenic | 35.0% | |
ATAATTACGACGAAGATTCC+AGG | - | chr3.4:21858443-21858462 | None:intergenic | 35.0% | |
ATTTGTCTTTGAACGTGAGA+CGG | + | chr3.4:21854383-21854402 | MS.gene82306:intron | 35.0% | |
CAATGGTTGAAACATATGTC+AGG | + | chr3.4:21859201-21859220 | MS.gene82306:CDS | 35.0% | |
CAGTGTTAAGTTTGTGCTAT+AGG | + | chr3.4:21856265-21856284 | MS.gene82306:intron | 35.0% | |
CATCCTAAAAGTTAAGTTCC+TGG | + | chr3.4:21858422-21858441 | MS.gene82306:intron | 35.0% | |
CTAAAGACTGAATGGATAGT+AGG | + | chr3.4:21853811-21853830 | MS.gene82306:intron | 35.0% | |
CTAGTAGACTGTTCGTTAAT+GGG | - | chr3.4:21858104-21858123 | None:intergenic | 35.0% | |
CTGACATATGTTTCAACCAT+TGG | - | chr3.4:21859203-21859222 | None:intergenic | 35.0% | |
CTGTACTTGTCTCCATTATT+TGG | + | chr3.4:21858470-21858489 | MS.gene82306:intron | 35.0% | |
GAGAATGAGATAAAGAAGGA+AGG | + | chr3.4:21853464-21853483 | MS.gene82306:CDS | 35.0% | |
GATTGCAAAACTGAACCATA+TGG | + | chr3.4:21859158-21859177 | MS.gene82306:CDS | 35.0% | |
GTCTTCTGTTAGAAATCTCA+AGG | - | chr3.4:21854544-21854563 | None:intergenic | 35.0% | |
GTTATGCAACACTGCTATAA+CGG | + | chr3.4:21857122-21857141 | MS.gene82306:intron | 35.0% | |
GTTGCTAGCATTTACAAAGA+GGG | + | chr3.4:21858512-21858531 | MS.gene82306:CDS | 35.0% | |
TAAAGCCTTTGACAGGTAAA+AGG | + | chr3.4:21855883-21855902 | MS.gene82306:intron | 35.0% | |
TAACCAAAGAGGTAAGAACT+AGG | - | chr3.4:21856408-21856427 | None:intergenic | 35.0% | |
TAACTGGGGAAGTTTAGTTA+GGG | + | chr3.4:21856242-21856261 | MS.gene82306:intron | 35.0% | |
TAACTTCGTCCCATTGTAAA+AGG | - | chr3.4:21857943-21857962 | None:intergenic | 35.0% | |
TACAAAGTCAGCGACTAATT+TGG | + | chr3.4:21853991-21854010 | MS.gene82306:intron | 35.0% | |
TAGAGGATAATTGAGCCAAT+CGG | + | chr3.4:21857981-21858000 | MS.gene82306:intron | 35.0% | |
TATGTCTTTCGCTAGTAGTT+TGG | + | chr3.4:21854485-21854504 | MS.gene82306:intron | 35.0% | |
TCATCCACCTTATATCCTAA+TGG | - | chr3.4:21857303-21857322 | None:intergenic | 35.0% | |
TGATATCGTCTCACACATTT+AGG | + | chr3.4:21854250-21854269 | MS.gene82306:intron | 35.0% | |
TGCATAAAATATGCAAGGTC+CGG | + | chr3.4:21856020-21856039 | MS.gene82306:intron | 35.0% | |
TGGTCTTCGAATATGTTTGT+AGG | + | chr3.4:21854505-21854524 | MS.gene82306:intron | 35.0% | |
TTAACTGGGGAAGTTTAGTT+AGG | + | chr3.4:21856241-21856260 | MS.gene82306:intron | 35.0% | |
TTCTAACAGAAGACACTCTT+TGG | + | chr3.4:21854550-21854569 | MS.gene82306:intron | 35.0% | |
TTGCTAGCATTTACAAAGAG+GGG | + | chr3.4:21858513-21858532 | MS.gene82306:CDS | 35.0% | |
TTGTCTCCATTATTTGGTAC+AGG | + | chr3.4:21858476-21858495 | MS.gene82306:intron | 35.0% | |
TTTGTATGGCACTCTCAAAT+AGG | - | chr3.4:21853977-21853996 | None:intergenic | 35.0% | |
! | AACATGTATTGATACTGAGG+AGG | + | chr3.4:21859310-21859329 | MS.gene82306:CDS | 35.0% |
! | AAGCTTTGTATACAAGCTAG+AGG | + | chr3.4:21857964-21857983 | MS.gene82306:intron | 35.0% |
! | AGGCTTTTAAACAGGCTAAT+AGG | + | chr3.4:21855821-21855840 | MS.gene82306:intron | 35.0% |
! | ATGCACTGATGAAGTAAAGT+AGG | + | chr3.4:21854314-21854333 | MS.gene82306:intron | 35.0% |
! | CACAAACTAGGCTTTTAAAC+AGG | + | chr3.4:21855813-21855832 | MS.gene82306:intron | 35.0% |
! | CAGGACTTTTCATACAGAAA+AGG | + | chr3.4:21859080-21859099 | MS.gene82306:intron | 35.0% |
! | CGTAACTCTAATAAAGTGTC+AGG | - | chr3.4:21853923-21853942 | None:intergenic | 35.0% |
! | CTCTCTTTTCTTCCAAAACA+AGG | + | chr3.4:21859006-21859025 | MS.gene82306:intron | 35.0% |
! | GAAAAACTTTTCTACCATGC+AGG | + | chr3.4:21857434-21857453 | MS.gene82306:intron | 35.0% |
! | GAATTTGTCTTTTGCTAGTC+AGG | + | chr3.4:21854061-21854080 | MS.gene82306:intron | 35.0% |
! | GACTCTAACCCTTTTACAAT+GGG | + | chr3.4:21857931-21857950 | MS.gene82306:intron | 35.0% |
! | GTTTTACGGAACTGTTGTAA+TGG | + | chr3.4:21857831-21857850 | MS.gene82306:intron | 35.0% |
! | TAACCTAGTTCTTACCTCTT+TGG | + | chr3.4:21856402-21856421 | MS.gene82306:intron | 35.0% |
! | TGACTCTAACCCTTTTACAA+TGG | + | chr3.4:21857930-21857949 | MS.gene82306:intron | 35.0% |
! | TGCACTGATGAAGTAAAGTA+GGG | + | chr3.4:21854315-21854334 | MS.gene82306:intron | 35.0% |
! | TTTGTTATACCCGTTCAGTT+CGG | + | chr3.4:21857809-21857828 | MS.gene82306:intron | 35.0% |
!! | AATTAGTCGCTGACTTTGTA+TGG | - | chr3.4:21853991-21854010 | None:intergenic | 35.0% |
!! | TAGCATCAAAAGGAGTACTT+AGG | - | chr3.4:21858052-21858071 | None:intergenic | 35.0% |
!! | TCCCACAGTTTGGTTATTTT+CGG | + | chr3.4:21857561-21857580 | MS.gene82306:intron | 35.0% |
!! | TTATTTGGTGCTGAAACTAC+TGG | + | chr3.4:21859113-21859132 | MS.gene82306:CDS | 35.0% |
!!! | CAAAGGCTTTATTTTAAGCC+GGG | - | chr3.4:21855874-21855893 | None:intergenic | 35.0% |
!!! | TCTGTTGGGATCAAGTTTTT+TGG | - | chr3.4:21856066-21856085 | None:intergenic | 35.0% |
AAAAACTAAGGCCTAAGCCT+TGG | - | chr3.4:21855909-21855928 | None:intergenic | 40.0% | |
AAAACTGAACCATATGGTGG+TGG | + | chr3.4:21859164-21859183 | MS.gene82306:CDS | 40.0% | |
AAAGTAGTTCCGGTTAGGAT+CGG | + | chr3.4:21857761-21857780 | MS.gene82306:intron | 40.0% | |
AAAGTCAGCGACTAATTTGG+TGG | + | chr3.4:21853994-21854013 | MS.gene82306:intron | 40.0% | |
AAGACTGAATGGATAGTAGG+TGG | + | chr3.4:21853814-21853833 | MS.gene82306:intron | 40.0% | |
AATCAGGTCTGATAACAGCA+AGG | - | chr3.4:21855645-21855664 | None:intergenic | 40.0% | |
AATTCTAGTACTACCCTGCA+TGG | - | chr3.4:21857451-21857470 | None:intergenic | 40.0% | |
AATTCTTCCGGTGGCAATTT+CGG | - | chr3.4:21853344-21853363 | None:intergenic | 40.0% | |
ACGGAACTGTTGTAATGGTT+CGG | + | chr3.4:21857836-21857855 | MS.gene82306:intron | 40.0% | |
ACTCAAATCTGAGAGCAAGA+AGG | - | chr3.4:21856324-21856343 | None:intergenic | 40.0% | |
AGCGTATTAAGGAGTTCATC+AGG | - | chr3.4:21856576-21856595 | None:intergenic | 40.0% | |
AGGAAGGAACTATAGTGACA+TGG | - | chr3.4:21853656-21853675 | None:intergenic | 40.0% | |
AGGCCTGGTTGAAAAAACTA+AGG | - | chr3.4:21855921-21855940 | None:intergenic | 40.0% | |
AGGCTTTGCTTAAATAGGCT+AGG | - | chr3.4:21855941-21855960 | None:intergenic | 40.0% | |
ATAATCCTCTCATGGGTCAT+GGG | + | chr3.4:21854940-21854959 | MS.gene82306:intron | 40.0% | |
ATGTCACTATAGTTCCTTCC+TGG | + | chr3.4:21853655-21853674 | MS.gene82306:intron | 40.0% | |
CACAATAGCGTAGCAGAATT+CGG | - | chr3.4:21857210-21857229 | None:intergenic | 40.0% | |
CACATATAAAGGGACTGTGA+TGG | + | chr3.4:21854621-21854640 | MS.gene82306:intron | 40.0% | |
CACCGAAAATAACCAAACTG+TGG | - | chr3.4:21857566-21857585 | None:intergenic | 40.0% | |
CACCTTCCTGTACCAAATAA+TGG | - | chr3.4:21858485-21858504 | None:intergenic | 40.0% | |
CACGATAGACAGATAGGTAA+TGG | - | chr3.4:21858129-21858148 | None:intergenic | 40.0% | |
CATAAAATATGCAAGGTCCG+GGG | + | chr3.4:21856022-21856041 | MS.gene82306:intron | 40.0% | |
CATTACCTATCTGTCTATCG+TGG | + | chr3.4:21858127-21858146 | MS.gene82306:intron | 40.0% | |
CCTAATGGCTGAAAAGATAG+AGG | - | chr3.4:21857288-21857307 | None:intergenic | 40.0% | |
CTCCATTATTTGGTACAGGA+AGG | + | chr3.4:21858480-21858499 | MS.gene82306:intron | 40.0% | |
CTGTTGGACTACACTTAGTT+GGG | + | chr3.4:21856969-21856988 | MS.gene82306:CDS | 40.0% | |
GAAAAGTCCTGCAACATACA+AGG | - | chr3.4:21859071-21859090 | None:intergenic | 40.0% | |
GAACGGGTATAACAAAGGTT+TGG | - | chr3.4:21857805-21857824 | None:intergenic | 40.0% | |
GAACTGAACGGGTATAACAA+AGG | - | chr3.4:21857810-21857829 | None:intergenic | 40.0% | |
GAGGGGAACAAAAATTCACT+CGG | + | chr3.4:21858530-21858549 | MS.gene82306:CDS | 40.0% | |
GCATAAAATATGCAAGGTCC+GGG | + | chr3.4:21856021-21856040 | MS.gene82306:intron | 40.0% | |
GGTTGCTAGCATTTACAAAG+AGG | + | chr3.4:21858511-21858530 | MS.gene82306:CDS | 40.0% | |
TACTAGCGAAAGACATATCG+AGG | - | chr3.4:21854482-21854501 | None:intergenic | 40.0% | |
TAGACTGTTCGTTAATGGGA+AGG | - | chr3.4:21858100-21858119 | None:intergenic | 40.0% | |
TAGCCTATTTAAGCAAAGCC+TGG | + | chr3.4:21855940-21855959 | MS.gene82306:intron | 40.0% | |
TATGGTTCCTTGTATGTTGC+AGG | + | chr3.4:21859061-21859080 | MS.gene82306:intron | 40.0% | |
TATTTAAGCAAAGCCTGGCT+CGG | + | chr3.4:21855945-21855964 | MS.gene82306:intron | 40.0% | |
TCAGCCATTAGGATATAAGG+TGG | + | chr3.4:21857296-21857315 | MS.gene82306:intron | 40.0% | |
TGATGAAGTAAAGTAGGGGT+AGG | + | chr3.4:21854320-21854339 | MS.gene82306:intron | 40.0% | |
TGCAAAACTGAACCATATGG+TGG | + | chr3.4:21859161-21859180 | MS.gene82306:CDS | 40.0% | |
TGGAACTATCAAGATCCCAA+TGG | + | chr3.4:21859184-21859203 | MS.gene82306:CDS | 40.0% | |
TGTCACTATAGTTCCTTCCT+GGG | + | chr3.4:21853656-21853675 | MS.gene82306:intron | 40.0% | |
TGTTGGACTACACTTAGTTG+GGG | + | chr3.4:21856970-21856989 | MS.gene82306:CDS | 40.0% | |
TGTTGTTCTTGGTAGATTCC+AGG | + | chr3.4:21856908-21856927 | MS.gene82306:intron | 40.0% | |
TTCCGTAAAACCGAACTGAA+CGG | - | chr3.4:21857822-21857841 | None:intergenic | 40.0% | |
TTGCAATCTAACAACGCTTC+AGG | - | chr3.4:21859146-21859165 | None:intergenic | 40.0% | |
! | AGAAGGTTTTTGCACATGAC+AGG | - | chr3.4:21856307-21856326 | None:intergenic | 40.0% |
! | ATTACTGGTAGTGAGAGAAG+AGG | - | chr3.4:21853214-21853233 | None:intergenic | 40.0% |
! | CAACAGAGTTCTAACCAAAG+AGG | - | chr3.4:21856419-21856438 | None:intergenic | 40.0% |
! | CCTCTATCTTTTCAGCCATT+AGG | + | chr3.4:21857285-21857304 | MS.gene82306:intron | 40.0% |
! | GCACTGATGAAGTAAAGTAG+GGG | + | chr3.4:21854316-21854335 | MS.gene82306:intron | 40.0% |
! | TCAAGATTTAGAGTACGCGT+AGG | - | chr3.4:21858190-21858209 | None:intergenic | 40.0% |
! | TTCGCAGTGTTGTTAAATCG+CGG | - | chr3.4:21857242-21857261 | None:intergenic | 40.0% |
! | TTGATAGTTCCACCACCATA+TGG | - | chr3.4:21859176-21859195 | None:intergenic | 40.0% |
! | TTTGTAGAGCGCTCTCAAAT+AGG | + | chr3.4:21853711-21853730 | MS.gene82306:intron | 40.0% |
! | TTTTTGCACATGACAGGTCA+TGG | - | chr3.4:21856301-21856320 | None:intergenic | 40.0% |
!! | ACCTTTTTGAAAGTCTGGCT+TGG | - | chr3.4:21855847-21855866 | None:intergenic | 40.0% |
!! | GCTTGATAGTGATATGCCTA+AGG | + | chr3.4:21855588-21855607 | MS.gene82306:intron | 40.0% |
!! | TCAAAAGGAGTACTTAGGTC+TGG | - | chr3.4:21858047-21858066 | None:intergenic | 40.0% |
!!! | AGGCCTTAGTTTTTTCAACC+AGG | + | chr3.4:21855915-21855934 | MS.gene82306:intron | 40.0% |
!!! | CTGAAGACATTTTTGGCTGA+TGG | + | chr3.4:21859345-21859364 | MS.gene82306:CDS | 40.0% |
!!! | GGGATCAAGTTTTTTGGTAG+TGG | - | chr3.4:21856060-21856079 | None:intergenic | 40.0% |
!!! | TCAAGTTTTTTGGTAGTGGC+CGG | - | chr3.4:21856056-21856075 | None:intergenic | 40.0% |
AAAAGCCTATGAAGCCTACC+AGG | + | chr3.4:21855333-21855352 | MS.gene82306:intron | 45.0% | |
ACTTTCAAAAAGGTCAGGCC+CGG | + | chr3.4:21855853-21855872 | MS.gene82306:intron | 45.0% | |
AGTTGTGCTTGTTTCACCTC+AGG | + | chr3.4:21853547-21853566 | MS.gene82306:CDS | 45.0% | |
CAAACTAAAGCGAGCTGGAT+TGG | + | chr3.4:21857326-21857345 | MS.gene82306:CDS | 45.0% | |
CAATCCAGCTCGCTTTAGTT+TGG | - | chr3.4:21857328-21857347 | None:intergenic | 45.0% | |
CAATCTAACAACGCTTCAGG+TGG | - | chr3.4:21859143-21859162 | None:intergenic | 45.0% | |
CATAATCCTCTCATGGGTCA+TGG | + | chr3.4:21854939-21854958 | MS.gene82306:intron | 45.0% | |
CTTTGACAGGTAAAAGGCCA+AGG | + | chr3.4:21855889-21855908 | MS.gene82306:intron | 45.0% | |
GAAGTAAAGTAGGGGTAGGT+GGG | + | chr3.4:21854324-21854343 | MS.gene82306:intron | 45.0% | |
GAGCCAGGCTTTGCTTAAAT+AGG | - | chr3.4:21855946-21855965 | None:intergenic | 45.0% | |
GAGTTCTGCTAGACCCTTAT+TGG | + | chr3.4:21858162-21858181 | MS.gene82306:intron | 45.0% | |
GATACCAAACTAAAGCGAGC+TGG | + | chr3.4:21857321-21857340 | MS.gene82306:CDS | 45.0% | |
GCCAAGCCAGACTTTCAAAA+AGG | + | chr3.4:21855843-21855862 | MS.gene82306:intron | 45.0% | |
GCCAGACTTTCAAAAAGGTC+AGG | + | chr3.4:21855848-21855867 | MS.gene82306:intron | 45.0% | |
GCTGTTGGACTACACTTAGT+TGG | + | chr3.4:21856968-21856987 | MS.gene82306:CDS | 45.0% | |
GGAAAGGAAATGGAGGGAAA+AGG | - | chr3.4:21853183-21853202 | None:intergenic | 45.0% | |
GGACTAAAGTAGTTCCGGTT+AGG | + | chr3.4:21857756-21857775 | MS.gene82306:intron | 45.0% | |
GGTAGTGAGAGAAGAGGAAA+GGG | - | chr3.4:21853208-21853227 | None:intergenic | 45.0% | |
GGTCTCCTGTTCAATTCTTC+CGG | - | chr3.4:21853356-21853375 | None:intergenic | 45.0% | |
GTAGTGAGAGAAGAGGAAAG+GGG | - | chr3.4:21853207-21853226 | None:intergenic | 45.0% | |
GTTGAGGGATTTCAGTCTCA+AGG | - | chr3.4:21853079-21853098 | None:intergenic | 45.0% | |
TAGGATCGGAAACACAGAAC+AGG | + | chr3.4:21857775-21857794 | MS.gene82306:intron | 45.0% | |
TCCGTAAAACCGAACTGAAC+GGG | - | chr3.4:21857821-21857840 | None:intergenic | 45.0% | |
TCGTGAACTATCCCACAGTT+TGG | + | chr3.4:21857551-21857570 | MS.gene82306:intron | 45.0% | |
TCTGTGTTTCCGATCCTAAC+CGG | - | chr3.4:21857773-21857792 | None:intergenic | 45.0% | |
TGAAGTAAAGTAGGGGTAGG+TGG | + | chr3.4:21854323-21854342 | MS.gene82306:intron | 45.0% | |
TGGTACAGGAAGGTGAAAAG+AGG | + | chr3.4:21858490-21858509 | MS.gene82306:intron | 45.0% | |
TGGTAGATTCCAGGAAACAC+TGG | + | chr3.4:21856917-21856936 | MS.gene82306:intron | 45.0% | |
TTGCTTAAATAGGCTAGGCC+TGG | - | chr3.4:21855936-21855955 | None:intergenic | 45.0% | |
! | AAGGAAGGTAGTTTGCCACA+TGG | + | chr3.4:21853479-21853498 | MS.gene82306:CDS | 45.0% |
! | ACCCGTTCAGTTCGGTTTTA+CGG | + | chr3.4:21857817-21857836 | MS.gene82306:intron | 45.0% |
! | ATCGGAGTTGGTTAAGTAGC+AGG | + | chr3.4:21856359-21856378 | MS.gene82306:intron | 45.0% |
! | TGGTAGTGAGAGAAGAGGAA+AGG | - | chr3.4:21853209-21853228 | None:intergenic | 45.0% |
!! | CTTGGCCTTTTACCTGTCAA+AGG | - | chr3.4:21855891-21855910 | None:intergenic | 45.0% |
!! | GCCTGACCTTTTTGAAAGTC+TGG | - | chr3.4:21855852-21855871 | None:intergenic | 45.0% |
!!! | AAGTTTTTTGGTAGTGGCCG+GGG | - | chr3.4:21856054-21856073 | None:intergenic | 45.0% |
!!! | CAAGTTTTTTGGTAGTGGCC+GGG | - | chr3.4:21856055-21856074 | None:intergenic | 45.0% |
!!! | AATAATTATTTTCATAATAT+TGG | - | chr3.4:21856626-21856645 | None:intergenic | 5.0% |
!!! | TTTTTTTTTATTTTGTATTT+GGG | + | chr3.4:21855470-21855489 | MS.gene82306:intron | 5.0% |
!!! | TTTTTTTTTTATTTTGTATT+TGG | + | chr3.4:21855469-21855488 | MS.gene82306:intron | 5.0% |
AAGGGGAGGAAAGGAAATGG+AGG | - | chr3.4:21853190-21853209 | None:intergenic | 50.0% | |
AATGGAGGGAAAAGGTGAGG+TGG | - | chr3.4:21853175-21853194 | None:intergenic | 50.0% | |
ACATGTGCAGCATCAGCTGT+TGG | + | chr3.4:21856953-21856972 | MS.gene82306:CDS | 50.0% | |
ACTCGTGAGCTTAGCTCAGT+TGG | + | chr3.4:21855988-21856007 | MS.gene82306:intron | 50.0% | |
ACTGAGCTAAGCTCACGAGT+AGG | - | chr3.4:21855988-21856007 | None:intergenic | 50.0% | |
AGAAGAGGAAAGGGGAGGAA+AGG | - | chr3.4:21853199-21853218 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAGAGAG+AGG | - | chr3.4:21853236-21853255 | None:intergenic | 50.0% | |
AGCAGGAACTGCATTTGAGC+TGG | + | chr3.4:21856376-21856395 | MS.gene82306:intron | 50.0% | |
AGGGGAGGAAAGGAAATGGA+GGG | - | chr3.4:21853189-21853208 | None:intergenic | 50.0% | |
AGTACGCGTAGGAGCCAATA+AGG | - | chr3.4:21858179-21858198 | None:intergenic | 50.0% | |
AGTCTCAAGGCAGCAGGAAA+TGG | - | chr3.4:21853066-21853085 | None:intergenic | 50.0% | |
AGTGGGGTTAGAGCAAGTCT+TGG | + | chr3.4:21856738-21856757 | MS.gene82306:intron | 50.0% | |
ATGGAGGGAAAAGGTGAGGT+GGG | - | chr3.4:21853174-21853193 | None:intergenic | 50.0% | |
ATTGAGAGGGCGGAGAAAGA+GGG | + | chr3.4:21855062-21855081 | MS.gene82306:intron | 50.0% | |
CAGGTAAAAGGCCAAGGCTT+AGG | + | chr3.4:21855895-21855914 | MS.gene82306:intron | 50.0% | |
CTCCTGTTCAATTCTTCCGG+TGG | - | chr3.4:21853353-21853372 | None:intergenic | 50.0% | |
CTGAGCTAAGCTCACGAGTA+GGG | - | chr3.4:21855987-21856006 | None:intergenic | 50.0% | |
GAAGGTGACTAACTCGATGG+AGG | - | chr3.4:21858082-21858101 | None:intergenic | 50.0% | |
GAGAGAGAGAGAGAGAGAGA+GGG | - | chr3.4:21853237-21853256 | None:intergenic | 50.0% | |
GAGAGAGAGAGAGGGATTAC+TGG | - | chr3.4:21853229-21853248 | None:intergenic | 50.0% | |
GATTTCAGTCTCAAGGCAGC+AGG | - | chr3.4:21853072-21853091 | None:intergenic | 50.0% | |
GGAAAGGGGAGGAAAGGAAA+TGG | - | chr3.4:21853193-21853212 | None:intergenic | 50.0% | |
GGAAATGGAGGGAAAAGGTG+AGG | - | chr3.4:21853178-21853197 | None:intergenic | 50.0% | |
GTACGCGTAGGAGCCAATAA+GGG | - | chr3.4:21858178-21858197 | None:intergenic | 50.0% | |
TATTCCCATCCCTACTCACG+AGG | - | chr3.4:21855178-21855197 | None:intergenic | 50.0% | |
TATTGAGAGGGCGGAGAAAG+AGG | + | chr3.4:21855061-21855080 | MS.gene82306:intron | 50.0% | |
TCCTTGAGTCCTCGTGAGTA+GGG | + | chr3.4:21855166-21855185 | MS.gene82306:intron | 50.0% | |
TCGTGAGTAGGGATGGGAAT+AGG | + | chr3.4:21855177-21855196 | MS.gene82306:intron | 50.0% | |
TCTCTCTCTCTCTCTCTCTG+TGG | + | chr3.4:21853269-21853288 | MS.gene82306:intron | 50.0% | |
TGAGCTAAGCTCACGAGTAG+GGG | - | chr3.4:21855986-21856005 | None:intergenic | 50.0% | |
TGAGCTTAGCTCAGTTGGCT+TGG | + | chr3.4:21855993-21856012 | MS.gene82306:intron | 50.0% | |
TGCCACCGGAAGAATTGAAC+AGG | + | chr3.4:21853348-21853367 | MS.gene82306:intron | 50.0% | |
TGGGAAGGTGACTAACTCGA+TGG | - | chr3.4:21858085-21858104 | None:intergenic | 50.0% | |
! | CTTTTAGTAGGCCGAGCCAT+AGG | - | chr3.4:21855222-21855241 | None:intergenic | 50.0% |
! | GGTAGTTTGCCACATGGTGT+TGG | + | chr3.4:21853485-21853504 | MS.gene82306:CDS | 50.0% |
! | TGCTGCTGCTGATAGGTTGA+GGG | - | chr3.4:21853094-21853113 | None:intergenic | 50.0% |
! | TTGCCACATGGTGTTGGAGA+GGG | + | chr3.4:21853491-21853510 | MS.gene82306:CDS | 50.0% |
! | TTTGCCACATGGTGTTGGAG+AGG | + | chr3.4:21853490-21853509 | MS.gene82306:CDS | 50.0% |
ACACACCCATGACCCATGAG+AGG | - | chr3.4:21854948-21854967 | None:intergenic | 55.0% | |
AGTAGGGATGGGAATAGGCC+AGG | + | chr3.4:21855182-21855201 | MS.gene82306:intron | 55.0% | |
ATCCCCTCTCCAACACCATG+TGG | - | chr3.4:21853497-21853516 | None:intergenic | 55.0% | |
CTAAGCTCACGAGTAGGGGT+GGG | - | chr3.4:21855982-21856001 | None:intergenic | 55.0% | |
CTCCTTGAGTCCTCGTGAGT+AGG | + | chr3.4:21855165-21855184 | MS.gene82306:intron | 55.0% | |
CTGCTGCTGCTGATAGGTTG+AGG | - | chr3.4:21853095-21853114 | None:intergenic | 55.0% | |
CTTCCGGTGGCAATTTCGGT+GGG | - | chr3.4:21853340-21853359 | None:intergenic | 55.0% | |
GAGTCCTCGTGAGTAGGGAT+GGG | + | chr3.4:21855171-21855190 | MS.gene82306:intron | 55.0% | |
GCAATGCAGCCAGTGTTTCC+TGG | - | chr3.4:21856929-21856948 | None:intergenic | 55.0% | |
GCTTACTCACTCACCCAGGA+AGG | - | chr3.4:21853672-21853691 | None:intergenic | 55.0% | |
GTGAGAGAAGAGGAAAGGGG+AGG | - | chr3.4:21853204-21853223 | None:intergenic | 55.0% | |
TACTCATATACGGGTCGGCC+TGG | - | chr3.4:21855354-21855373 | None:intergenic | 55.0% | |
TAGCCCACCGAAATTGCCAC+CGG | + | chr3.4:21853334-21853353 | MS.gene82306:intron | 55.0% | |
TCCCTACTCACGAGGACTCA+AGG | - | chr3.4:21855170-21855189 | None:intergenic | 55.0% | |
TCTTCCGGTGGCAATTTCGG+TGG | - | chr3.4:21853341-21853360 | None:intergenic | 55.0% | |
TGAGTCCTCGTGAGTAGGGA+TGG | + | chr3.4:21855170-21855189 | MS.gene82306:intron | 55.0% | |
TTAAACGAGCTAGGCCGAGC+CGG | - | chr3.4:21855246-21855265 | None:intergenic | 55.0% | |
! | TGCCACATGGTGTTGGAGAG+GGG | + | chr3.4:21853492-21853511 | MS.gene82306:CDS | 55.0% |
!! | GGTTTGCTGCTGCTGCTGAT+AGG | - | chr3.4:21853101-21853120 | None:intergenic | 55.0% |
AAGGTCCGGGGTTCAAACCC+CGG | + | chr3.4:21856034-21856053 | MS.gene82306:intron | 60.0% | |
AGTAGGGGTGGGAATGAGCC+GGG | - | chr3.4:21855971-21855990 | None:intergenic | 60.0% | |
CATATACGGGTCGGCCTGGT+AGG | - | chr3.4:21855350-21855369 | None:intergenic | 60.0% | |
GAGTAGGGGTGGGAATGAGC+CGG | - | chr3.4:21855972-21855991 | None:intergenic | 60.0% | |
GCTAAGCTCACGAGTAGGGG+TGG | - | chr3.4:21855983-21856002 | None:intergenic | 60.0% | |
GGCCTACTAAAAGCCCGGCT+CGG | + | chr3.4:21855229-21855248 | MS.gene82306:intron | 60.0% | |
GGCTCGGCCTACTAAAAGCC+CGG | + | chr3.4:21855224-21855243 | MS.gene82306:intron | 60.0% | |
GGTGGCTTACTCACTCACCC+AGG | - | chr3.4:21853676-21853695 | None:intergenic | 60.0% | |
GTCGGCCTGGTAGGCTTCAT+AGG | - | chr3.4:21855341-21855360 | None:intergenic | 60.0% | |
TAAACGAGCTAGGCCGAGCC+GGG | - | chr3.4:21855245-21855264 | None:intergenic | 60.0% | |
AGTGGCCGGGGTTTGAACCC+CGG | - | chr3.4:21856042-21856061 | None:intergenic | 65.0% | |
! | GGCCGAGCCGGGCTTTTAGT+AGG | - | chr3.4:21855234-21855253 | None:intergenic | 65.0% |
!! | AAGCAAAGCCTGGCTCGGCC+CGG | + | chr3.4:21855950-21855969 | MS.gene82306:intron | 65.0% |
AATAGGCCAGGCCGCCCGTC+AGG | + | chr3.4:21855194-21855213 | MS.gene82306:intron | 70.0% | |
AGCCATAGGCCCCTGACGGG+CGG | - | chr3.4:21855208-21855227 | None:intergenic | 70.0% | |
ATAGGCCAGGCCGCCCGTCA+GGG | + | chr3.4:21855195-21855214 | MS.gene82306:intron | 70.0% | |
CCCGTCAGGGGCCTATGGCT+CGG | + | chr3.4:21855208-21855227 | MS.gene82306:intron | 70.0% | |
CCGAGCCATAGGCCCCTGAC+GGG | - | chr3.4:21855211-21855230 | None:intergenic | 70.0% | |
GCCGAGCCATAGGCCCCTGA+CGG | - | chr3.4:21855212-21855231 | None:intergenic | 70.0% | |
GGAATGAGCCGGGCCGAGCC+AGG | - | chr3.4:21855961-21855980 | None:intergenic | 75.0% | |
TAGGCCAGGCCGCCCGTCAG+GGG | + | chr3.4:21855196-21855215 | MS.gene82306:intron | 75.0% | |
! | GGCCGCCCGTCAGGGGCCTA+TGG | + | chr3.4:21855203-21855222 | MS.gene82306:intron | 80.0% |
!! | TAGGCCCCTGACGGGCGGCC+TGG | - | chr3.4:21855203-21855222 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 21853054 | 21859364 | 21853054 | ID=MS.gene82306 |
chr3.4 | mRNA | 21853054 | 21859364 | 21853054 | ID=MS.gene82306.t1;Parent=MS.gene82306 |
chr3.4 | exon | 21853054 | 21853153 | 21853054 | ID=MS.gene82306.t1.exon1;Parent=MS.gene82306.t1 |
chr3.4 | CDS | 21853054 | 21853153 | 21853054 | ID=cds.MS.gene82306.t1;Parent=MS.gene82306.t1 |
chr3.4 | exon | 21853438 | 21853568 | 21853438 | ID=MS.gene82306.t1.exon2;Parent=MS.gene82306.t1 |
chr3.4 | CDS | 21853438 | 21853568 | 21853438 | ID=cds.MS.gene82306.t1;Parent=MS.gene82306.t1 |
chr3.4 | exon | 21856923 | 21856991 | 21856923 | ID=MS.gene82306.t1.exon3;Parent=MS.gene82306.t1 |
chr3.4 | CDS | 21856923 | 21856991 | 21856923 | ID=cds.MS.gene82306.t1;Parent=MS.gene82306.t1 |
chr3.4 | exon | 21857300 | 21857358 | 21857300 | ID=MS.gene82306.t1.exon4;Parent=MS.gene82306.t1 |
chr3.4 | CDS | 21857300 | 21857358 | 21857300 | ID=cds.MS.gene82306.t1;Parent=MS.gene82306.t1 |
chr3.4 | exon | 21858353 | 21858413 | 21858353 | ID=MS.gene82306.t1.exon5;Parent=MS.gene82306.t1 |
chr3.4 | CDS | 21858353 | 21858413 | 21858353 | ID=cds.MS.gene82306.t1;Parent=MS.gene82306.t1 |
chr3.4 | exon | 21858498 | 21858551 | 21858498 | ID=MS.gene82306.t1.exon6;Parent=MS.gene82306.t1 |
chr3.4 | CDS | 21858498 | 21858551 | 21858498 | ID=cds.MS.gene82306.t1;Parent=MS.gene82306.t1 |
chr3.4 | exon | 21859083 | 21859364 | 21859083 | ID=MS.gene82306.t1.exon7;Parent=MS.gene82306.t1 |
chr3.4 | CDS | 21859083 | 21859364 | 21859083 | ID=cds.MS.gene82306.t1;Parent=MS.gene82306.t1 |
Gene Sequence |
Protein sequence |