Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85109.t1 | XP_003597752.1 | 100 | 160 | 0 | 0 | 1 | 160 | 27 | 186 | 8.80E-88 | 332.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85109.t1 | Q9XER8 | 95.0 | 160 | 8 | 0 | 1 | 160 | 25 | 184 | 1.9e-86 | 319.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85109.t1 | G7II22 | 100.0 | 160 | 0 | 0 | 1 | 160 | 27 | 186 | 6.3e-88 | 332.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049424 | MS.gene85109 | 0.819702 | 1.01E-52 | -1.69E-46 |
| MS.gene049653 | MS.gene85109 | 0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene049951 | MS.gene85109 | 0.80018 | 1.63E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene85109 | 0.808844 | 2.54E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene85109 | 0.816362 | 5.75E-52 | -1.69E-46 |
| MS.gene050384 | MS.gene85109 | 0.827758 | 1.31E-54 | -1.69E-46 |
| MS.gene050386 | MS.gene85109 | 0.838826 | 2.28E-57 | -1.69E-46 |
| MS.gene050941 | MS.gene85109 | 0.818914 | 1.53E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene85109 | 0.818269 | 2.14E-52 | -1.69E-46 |
| MS.gene051184 | MS.gene85109 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene051245 | MS.gene85109 | 0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene051452 | MS.gene85109 | 0.84699 | 1.53E-59 | -1.69E-46 |
| MS.gene051757 | MS.gene85109 | 0.800502 | 1.40E-48 | -1.69E-46 |
| MS.gene052954 | MS.gene85109 | 0.829155 | 6.03E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene85109 | 0.821577 | 3.75E-53 | -1.69E-46 |
| MS.gene053188 | MS.gene85109 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene85109 | 0.807126 | 5.89E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene85109 | -0.834451 | 2.98E-56 | -1.69E-46 |
| MS.gene053575 | MS.gene85109 | 0.812212 | 4.75E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene85109 | 0.801614 | 8.29E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene85109 | 0.843913 | 1.05E-58 | -1.69E-46 |
| MS.gene056849 | MS.gene85109 | 0.837529 | 4.93E-57 | -1.69E-46 |
| MS.gene057108 | MS.gene85109 | 0.831946 | 1.25E-55 | -1.69E-46 |
| MS.gene057109 | MS.gene85109 | 0.829334 | 5.46E-55 | -1.69E-46 |
| MS.gene057110 | MS.gene85109 | 0.832543 | 8.91E-56 | -1.69E-46 |
| MS.gene057140 | MS.gene85109 | 0.823995 | 1.03E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene85109 | 0.822122 | 2.80E-53 | -1.69E-46 |
| MS.gene057392 | MS.gene85109 | 0.84634 | 2.31E-59 | -1.69E-46 |
| MS.gene05795 | MS.gene85109 | 0.804498 | 2.10E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene85109 | 0.821088 | 4.86E-53 | -1.69E-46 |
| MS.gene058008 | MS.gene85109 | 0.812741 | 3.64E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene85109 | 0.814466 | 1.52E-51 | -1.69E-46 |
| MS.gene058054 | MS.gene85109 | 0.836822 | 7.47E-57 | -1.69E-46 |
| MS.gene058055 | MS.gene85109 | 0.836465 | 9.21E-57 | -1.69E-46 |
| MS.gene059050 | MS.gene85109 | 0.803556 | 3.30E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene85109 | 0.812837 | 3.47E-51 | -1.69E-46 |
| MS.gene059290 | MS.gene85109 | 0.817168 | 3.79E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene85109 | 0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene85109 | 0.803078 | 4.14E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85109.t1 | MTR_2g101890 | 100.000 | 160 | 0 | 0 | 1 | 160 | 27 | 186 | 4.47e-119 | 334 |
| MS.gene85109.t1 | MTR_4g012940 | 97.500 | 160 | 4 | 0 | 1 | 160 | 25 | 184 | 1.41e-116 | 328 |
| MS.gene85109.t1 | MTR_4g069850 | 87.500 | 160 | 20 | 0 | 1 | 160 | 25 | 184 | 1.57e-104 | 298 |
| MS.gene85109.t1 | MTR_1g097420 | 76.875 | 160 | 37 | 0 | 1 | 160 | 25 | 184 | 1.13e-92 | 268 |
| MS.gene85109.t1 | MTR_1g097420 | 76.875 | 160 | 37 | 0 | 1 | 160 | 52 | 211 | 2.94e-92 | 268 |
| MS.gene85109.t1 | MTR_8g092020 | 70.886 | 158 | 46 | 0 | 1 | 158 | 29 | 186 | 7.26e-85 | 248 |
| MS.gene85109.t1 | MTR_6g039490 | 62.500 | 160 | 60 | 0 | 1 | 160 | 25 | 184 | 1.91e-71 | 214 |
| MS.gene85109.t1 | MTR_1452s0010 | 81.928 | 83 | 15 | 0 | 4 | 86 | 1 | 83 | 7.22e-48 | 150 |
| MS.gene85109.t1 | MTR_1686s0010 | 65.000 | 80 | 28 | 0 | 4 | 83 | 1 | 80 | 2.41e-36 | 121 |
| MS.gene85109.t1 | MTR_1663s0010 | 70.667 | 75 | 22 | 0 | 86 | 160 | 1 | 75 | 5.19e-34 | 114 |
| MS.gene85109.t1 | MTR_4g099470 | 40.789 | 152 | 80 | 4 | 9 | 157 | 9 | 153 | 1.90e-30 | 108 |
| MS.gene85109.t1 | MTR_5g013900 | 39.865 | 148 | 82 | 2 | 1 | 148 | 26 | 166 | 3.36e-30 | 109 |
| MS.gene85109.t1 | MTR_4g064897 | 38.514 | 148 | 84 | 3 | 1 | 148 | 29 | 169 | 7.30e-30 | 108 |
| MS.gene85109.t1 | MTR_2g005500 | 37.342 | 158 | 89 | 4 | 3 | 157 | 28 | 178 | 7.43e-30 | 108 |
| MS.gene85109.t1 | MTR_2g005510 | 37.126 | 167 | 88 | 5 | 1 | 157 | 32 | 191 | 3.66e-29 | 107 |
| MS.gene85109.t1 | MTR_3g069510 | 38.514 | 148 | 84 | 3 | 1 | 148 | 29 | 169 | 4.64e-29 | 106 |
| MS.gene85109.t1 | MTR_3g087160 | 39.865 | 148 | 82 | 2 | 1 | 148 | 26 | 166 | 5.98e-29 | 105 |
| MS.gene85109.t1 | MTR_8g090215 | 41.892 | 148 | 79 | 3 | 1 | 148 | 26 | 166 | 1.04e-28 | 105 |
| MS.gene85109.t1 | MTR_7g081700 | 37.975 | 158 | 88 | 4 | 3 | 157 | 27 | 177 | 1.08e-28 | 105 |
| MS.gene85109.t1 | MTR_4g098950 | 39.189 | 148 | 83 | 2 | 1 | 148 | 26 | 166 | 1.13e-28 | 105 |
| MS.gene85109.t1 | MTR_4g079350 | 38.411 | 151 | 85 | 4 | 1 | 150 | 30 | 173 | 1.21e-28 | 105 |
| MS.gene85109.t1 | MTR_4g088090 | 37.748 | 151 | 86 | 4 | 1 | 150 | 30 | 173 | 1.46e-28 | 105 |
| MS.gene85109.t1 | MTR_2g014990 | 38.411 | 151 | 85 | 4 | 1 | 150 | 30 | 173 | 3.20e-28 | 104 |
| MS.gene85109.t1 | MTR_8g006970 | 37.107 | 159 | 90 | 4 | 3 | 158 | 41 | 192 | 7.63e-28 | 103 |
| MS.gene85109.t1 | MTR_1g068740 | 38.255 | 149 | 86 | 3 | 3 | 151 | 34 | 176 | 1.21e-27 | 102 |
| MS.gene85109.t1 | MTR_8g006970 | 39.041 | 146 | 82 | 3 | 3 | 148 | 27 | 165 | 1.27e-27 | 101 |
| MS.gene85109.t1 | MTR_2g096550 | 38.158 | 152 | 89 | 4 | 9 | 160 | 40 | 186 | 1.31e-27 | 102 |
| MS.gene85109.t1 | MTR_7g100020 | 38.255 | 149 | 86 | 3 | 3 | 151 | 34 | 176 | 1.55e-27 | 102 |
| MS.gene85109.t1 | MTR_1812s0010 | 59.459 | 74 | 30 | 0 | 86 | 159 | 1 | 74 | 2.42e-27 | 97.8 |
| MS.gene85109.t1 | MTR_1g115325 | 38.255 | 149 | 86 | 3 | 3 | 151 | 34 | 176 | 2.47e-27 | 102 |
| MS.gene85109.t1 | MTR_1g068730 | 36.076 | 158 | 95 | 3 | 3 | 160 | 34 | 185 | 3.38e-27 | 101 |
| MS.gene85109.t1 | MTR_7g405790 | 34.194 | 155 | 95 | 3 | 1 | 155 | 32 | 179 | 1.69e-26 | 100 |
| MS.gene85109.t1 | MTR_8g036220 | 38.621 | 145 | 82 | 3 | 1 | 145 | 33 | 170 | 2.45e-26 | 99.8 |
| MS.gene85109.t1 | MTR_7g051940 | 34.839 | 155 | 94 | 3 | 1 | 155 | 30 | 177 | 3.48e-26 | 99.0 |
| MS.gene85109.t1 | MTR_3g086980 | 36.486 | 148 | 87 | 3 | 1 | 148 | 33 | 173 | 7.71e-26 | 98.2 |
| MS.gene85109.t1 | MTR_2g090865 | 37.500 | 152 | 85 | 5 | 1 | 150 | 28 | 171 | 8.17e-26 | 98.2 |
| MS.gene85109.t1 | MTR_2g093510 | 78.788 | 66 | 14 | 0 | 95 | 160 | 761 | 826 | 8.67e-26 | 102 |
| MS.gene85109.t1 | MTR_2g075950 | 36.424 | 151 | 88 | 4 | 1 | 150 | 30 | 173 | 9.41e-26 | 97.8 |
| MS.gene85109.t1 | MTR_1g052475 | 37.162 | 148 | 86 | 3 | 1 | 148 | 32 | 172 | 1.26e-25 | 97.8 |
| MS.gene85109.t1 | MTR_8g089985 | 35.135 | 148 | 89 | 3 | 1 | 148 | 34 | 174 | 3.44e-25 | 96.7 |
| MS.gene85109.t1 | MTR_6g021790 | 34.641 | 153 | 93 | 3 | 3 | 155 | 25 | 170 | 5.11e-25 | 95.9 |
| MS.gene85109.t1 | MTR_6g079550 | 37.086 | 151 | 87 | 4 | 1 | 150 | 29 | 172 | 9.53e-25 | 95.5 |
| MS.gene85109.t1 | MTR_8g103550 | 34.177 | 158 | 97 | 3 | 3 | 160 | 28 | 178 | 1.12e-24 | 94.7 |
| MS.gene85109.t1 | MTR_2g083860 | 36.552 | 145 | 85 | 3 | 1 | 145 | 30 | 167 | 1.29e-24 | 95.1 |
| MS.gene85109.t1 | MTR_3g064390 | 33.758 | 157 | 97 | 3 | 3 | 159 | 29 | 178 | 2.09e-24 | 94.0 |
| MS.gene85109.t1 | MTR_0262s0050 | 36.486 | 148 | 87 | 3 | 1 | 148 | 32 | 172 | 2.46e-24 | 94.4 |
| MS.gene85109.t1 | MTR_8g031680 | 37.255 | 153 | 85 | 4 | 3 | 151 | 25 | 170 | 2.48e-24 | 94.0 |
| MS.gene85109.t1 | MTR_5g076590 | 33.758 | 157 | 97 | 3 | 3 | 159 | 29 | 178 | 4.52e-24 | 93.2 |
| MS.gene85109.t1 | MTR_4g063160 | 37.086 | 151 | 87 | 4 | 3 | 151 | 34 | 178 | 1.13e-23 | 92.4 |
| MS.gene85109.t1 | MTR_1g078200 | 34.667 | 150 | 91 | 4 | 1 | 150 | 31 | 173 | 1.53e-23 | 92.4 |
| MS.gene85109.t1 | MTR_2g027660 | 34.965 | 143 | 86 | 3 | 3 | 145 | 25 | 160 | 2.54e-23 | 91.7 |
| MS.gene85109.t1 | MTR_8g027220 | 35.862 | 145 | 86 | 3 | 1 | 145 | 43 | 180 | 1.04e-22 | 90.5 |
| MS.gene85109.t1 | MTR_8g107070 | 36.552 | 145 | 85 | 3 | 1 | 145 | 31 | 168 | 1.06e-22 | 90.9 |
| MS.gene85109.t1 | MTR_8g031870 | 33.566 | 143 | 88 | 3 | 3 | 145 | 25 | 160 | 2.53e-22 | 88.2 |
| MS.gene85109.t1 | MTR_8g093740 | 40.152 | 132 | 72 | 4 | 16 | 146 | 44 | 169 | 2.84e-22 | 88.6 |
| MS.gene85109.t1 | MTR_8g093740 | 39.098 | 133 | 74 | 4 | 15 | 146 | 10 | 136 | 4.69e-22 | 87.4 |
| MS.gene85109.t1 | MTR_1g094220 | 32.692 | 156 | 97 | 4 | 3 | 157 | 50 | 198 | 4.91e-21 | 85.5 |
| MS.gene85109.t1 | MTR_1g094220 | 33.557 | 149 | 91 | 4 | 3 | 150 | 50 | 191 | 6.76e-21 | 84.7 |
| MS.gene85109.t1 | MTR_7g117910 | 35.115 | 131 | 77 | 3 | 1 | 131 | 37 | 159 | 7.07e-21 | 85.1 |
| MS.gene85109.t1 | MTR_8g031660 | 34.266 | 143 | 87 | 3 | 3 | 145 | 25 | 160 | 7.81e-21 | 85.1 |
| MS.gene85109.t1 | MTR_1g029450 | 40.152 | 132 | 72 | 4 | 16 | 146 | 48 | 173 | 2.14e-20 | 84.0 |
| MS.gene85109.t1 | MTR_1g062760 | 40.152 | 132 | 72 | 4 | 16 | 146 | 45 | 170 | 2.17e-20 | 84.0 |
| MS.gene85109.t1 | MTR_7g103070 | 40.909 | 132 | 71 | 5 | 16 | 146 | 48 | 173 | 2.31e-20 | 84.0 |
| MS.gene85109.t1 | MTR_1g068730 | 38.462 | 104 | 60 | 1 | 3 | 106 | 34 | 133 | 2.71e-20 | 82.8 |
| MS.gene85109.t1 | MTR_1g068740 | 38.462 | 104 | 60 | 1 | 3 | 106 | 34 | 133 | 4.77e-20 | 82.8 |
| MS.gene85109.t1 | MTR_1g094220 | 33.103 | 145 | 89 | 4 | 3 | 146 | 50 | 187 | 1.29e-19 | 81.6 |
| MS.gene85109.t1 | MTR_8g031830 | 32.857 | 140 | 87 | 3 | 3 | 142 | 25 | 157 | 1.33e-19 | 81.6 |
| MS.gene85109.t1 | MTR_1g090717 | 38.129 | 139 | 79 | 4 | 16 | 153 | 48 | 180 | 1.44e-19 | 81.6 |
| MS.gene85109.t1 | MTR_1g094220 | 33.103 | 145 | 89 | 4 | 3 | 146 | 50 | 187 | 1.88e-19 | 82.0 |
| MS.gene85109.t1 | MTR_3g096350 | 37.121 | 132 | 76 | 4 | 16 | 146 | 43 | 168 | 4.09e-19 | 80.5 |
| MS.gene85109.t1 | MTR_5g036990 | 52.857 | 70 | 32 | 1 | 15 | 83 | 32 | 101 | 2.26e-18 | 76.3 |
| MS.gene85109.t1 | MTR_3g064390 | 36.538 | 104 | 62 | 1 | 3 | 106 | 29 | 128 | 2.76e-18 | 77.0 |
| MS.gene85109.t1 | MTR_2g102060 | 29.299 | 157 | 104 | 3 | 3 | 159 | 29 | 178 | 1.91e-17 | 75.9 |
| MS.gene85109.t1 | MTR_7g103070 | 39.344 | 122 | 67 | 5 | 26 | 146 | 2 | 117 | 5.11e-17 | 73.9 |
| MS.gene85109.t1 | MTR_3g107717 | 29.655 | 145 | 92 | 3 | 1 | 145 | 30 | 164 | 1.34e-15 | 71.2 |
| MS.gene85109.t1 | MTR_3g107713 | 29.655 | 145 | 92 | 3 | 1 | 145 | 30 | 164 | 1.38e-15 | 71.2 |
| MS.gene85109.t1 | MTR_3g107707 | 29.655 | 145 | 92 | 3 | 1 | 145 | 30 | 164 | 1.38e-15 | 71.2 |
| MS.gene85109.t1 | MTR_3g096350 | 40.000 | 90 | 50 | 2 | 16 | 104 | 43 | 129 | 2.79e-15 | 69.3 |
| MS.gene85109.t1 | MTR_3g096350 | 40.000 | 90 | 50 | 2 | 16 | 104 | 43 | 129 | 3.09e-15 | 68.9 |
| MS.gene85109.t1 | MTR_6g087980 | 31.325 | 166 | 99 | 5 | 4 | 160 | 26 | 185 | 1.71e-14 | 68.2 |
| MS.gene85109.t1 | MTR_4g113620 | 33.051 | 118 | 69 | 3 | 38 | 155 | 58 | 165 | 1.76e-13 | 65.5 |
| MS.gene85109.t1 | MTR_4g088055 | 29.630 | 162 | 99 | 5 | 1 | 153 | 23 | 178 | 4.70e-13 | 64.3 |
| MS.gene85109.t1 | MTR_2g090875 | 29.012 | 162 | 100 | 5 | 1 | 153 | 23 | 178 | 3.96e-12 | 61.6 |
| MS.gene85109.t1 | MTR_5g022600 | 28.395 | 162 | 101 | 6 | 1 | 153 | 23 | 178 | 2.06e-11 | 59.7 |
| MS.gene85109.t1 | MTR_8g075240 | 29.012 | 162 | 100 | 6 | 1 | 153 | 23 | 178 | 5.36e-11 | 58.5 |
| MS.gene85109.t1 | MTR_3g078260 | 30.000 | 160 | 97 | 5 | 4 | 154 | 28 | 181 | 7.29e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85109.t1 | AT1G52280 | 93.750 | 160 | 10 | 0 | 1 | 160 | 25 | 184 | 1.17e-112 | 318 |
| MS.gene85109.t1 | AT3G16100 | 91.250 | 160 | 14 | 0 | 1 | 160 | 25 | 184 | 8.83e-110 | 311 |
| MS.gene85109.t1 | AT3G18820 | 90.000 | 160 | 16 | 0 | 1 | 160 | 25 | 184 | 1.60e-105 | 300 |
| MS.gene85109.t1 | AT1G49300 | 87.500 | 160 | 20 | 0 | 1 | 160 | 25 | 184 | 2.45e-103 | 295 |
| MS.gene85109.t1 | AT1G49300 | 87.500 | 160 | 20 | 0 | 1 | 160 | 25 | 184 | 2.45e-103 | 295 |
| MS.gene85109.t1 | AT1G22740 | 76.250 | 160 | 38 | 0 | 1 | 160 | 25 | 184 | 4.54e-91 | 263 |
| MS.gene85109.t1 | AT4G09720 | 75.000 | 160 | 40 | 0 | 1 | 160 | 25 | 184 | 7.52e-90 | 260 |
| MS.gene85109.t1 | AT4G09720 | 72.121 | 165 | 41 | 1 | 1 | 160 | 25 | 189 | 3.32e-86 | 251 |
| MS.gene85109.t1 | AT4G09720 | 70.175 | 171 | 40 | 1 | 1 | 160 | 25 | 195 | 4.38e-86 | 251 |
| MS.gene85109.t1 | AT4G09720 | 75.168 | 149 | 37 | 0 | 12 | 160 | 2 | 150 | 7.32e-83 | 241 |
| MS.gene85109.t1 | AT4G09720 | 75.168 | 149 | 37 | 0 | 12 | 160 | 2 | 150 | 7.32e-83 | 241 |
| MS.gene85109.t1 | AT4G09720 | 75.168 | 149 | 37 | 0 | 12 | 160 | 2 | 150 | 7.32e-83 | 241 |
| MS.gene85109.t1 | AT2G21880 | 69.182 | 159 | 49 | 0 | 1 | 159 | 26 | 184 | 8.74e-81 | 238 |
| MS.gene85109.t1 | AT2G21880 | 69.182 | 159 | 49 | 0 | 1 | 159 | 1 | 159 | 9.06e-81 | 237 |
| MS.gene85109.t1 | AT2G21880 | 69.182 | 159 | 49 | 0 | 1 | 159 | 1 | 159 | 9.06e-81 | 237 |
| MS.gene85109.t1 | AT2G21880 | 64.151 | 159 | 49 | 1 | 1 | 159 | 26 | 176 | 3.99e-71 | 213 |
| MS.gene85109.t1 | AT5G39620 | 54.487 | 156 | 71 | 0 | 1 | 156 | 22 | 177 | 1.03e-59 | 184 |
| MS.gene85109.t1 | AT2G44610 | 40.541 | 148 | 81 | 2 | 1 | 148 | 26 | 166 | 1.06e-30 | 110 |
| MS.gene85109.t1 | AT1G09630 | 39.189 | 148 | 83 | 3 | 1 | 148 | 29 | 169 | 1.71e-30 | 110 |
| MS.gene85109.t1 | AT4G17530 | 38.608 | 158 | 87 | 4 | 3 | 157 | 27 | 177 | 8.92e-30 | 108 |
| MS.gene85109.t1 | AT5G47200 | 38.608 | 158 | 87 | 4 | 3 | 157 | 27 | 177 | 1.63e-29 | 107 |
| MS.gene85109.t1 | AT1G28550 | 38.411 | 151 | 85 | 4 | 1 | 150 | 30 | 173 | 3.50e-29 | 107 |
| MS.gene85109.t1 | AT3G15060 | 39.310 | 145 | 81 | 3 | 1 | 145 | 30 | 167 | 3.64e-29 | 106 |
| MS.gene85109.t1 | AT5G60860 | 40.000 | 145 | 80 | 3 | 1 | 145 | 30 | 167 | 4.61e-29 | 106 |
| MS.gene85109.t1 | AT2G33870 | 37.748 | 151 | 86 | 4 | 1 | 150 | 30 | 173 | 8.08e-29 | 105 |
| MS.gene85109.t1 | AT5G59840 | 38.926 | 149 | 85 | 3 | 3 | 151 | 34 | 176 | 4.72e-28 | 103 |
| MS.gene85109.t1 | AT5G64990 | 43.226 | 155 | 71 | 5 | 8 | 157 | 31 | 173 | 6.44e-28 | 103 |
| MS.gene85109.t1 | AT1G05810 | 36.129 | 155 | 92 | 3 | 1 | 155 | 29 | 176 | 1.09e-27 | 103 |
| MS.gene85109.t1 | AT5G45750 | 38.411 | 151 | 85 | 4 | 1 | 150 | 30 | 173 | 1.33e-27 | 102 |
| MS.gene85109.t1 | AT1G07410 | 36.486 | 148 | 87 | 3 | 1 | 148 | 29 | 169 | 1.34e-27 | 102 |
| MS.gene85109.t1 | AT5G59150 | 35.811 | 148 | 88 | 3 | 1 | 148 | 29 | 169 | 1.66e-27 | 102 |
| MS.gene85109.t1 | AT3G46830 | 37.162 | 148 | 86 | 3 | 1 | 148 | 29 | 169 | 1.69e-27 | 102 |
| MS.gene85109.t1 | AT3G46830 | 37.162 | 148 | 86 | 3 | 1 | 148 | 29 | 169 | 1.69e-27 | 102 |
| MS.gene85109.t1 | AT3G11730 | 38.356 | 146 | 83 | 3 | 3 | 148 | 27 | 165 | 1.76e-27 | 102 |
| MS.gene85109.t1 | AT3G53610 | 38.926 | 149 | 85 | 4 | 3 | 151 | 34 | 176 | 1.82e-27 | 102 |
| MS.gene85109.t1 | AT3G53610 | 38.926 | 149 | 85 | 4 | 3 | 151 | 34 | 176 | 1.82e-27 | 102 |
| MS.gene85109.t1 | AT3G53610 | 38.926 | 149 | 85 | 4 | 3 | 151 | 34 | 176 | 1.82e-27 | 102 |
| MS.gene85109.t1 | AT1G05810 | 37.162 | 148 | 86 | 3 | 1 | 148 | 75 | 215 | 2.61e-27 | 103 |
| MS.gene85109.t1 | AT3G12160 | 38.514 | 148 | 84 | 3 | 1 | 148 | 32 | 172 | 3.07e-27 | 102 |
| MS.gene85109.t1 | AT1G02130 | 36.709 | 158 | 90 | 4 | 3 | 157 | 27 | 177 | 3.16e-27 | 101 |
| MS.gene85109.t1 | AT3G46060 | 38.255 | 149 | 86 | 3 | 3 | 151 | 34 | 176 | 3.28e-27 | 101 |
| MS.gene85109.t1 | AT3G46060 | 38.255 | 149 | 86 | 3 | 3 | 151 | 34 | 176 | 3.28e-27 | 101 |
| MS.gene85109.t1 | AT3G46060 | 38.255 | 149 | 86 | 3 | 3 | 151 | 34 | 176 | 3.28e-27 | 101 |
| MS.gene85109.t1 | AT2G31680 | 34.194 | 155 | 95 | 3 | 1 | 155 | 29 | 176 | 4.31e-27 | 101 |
| MS.gene85109.t1 | AT4G39890 | 37.838 | 148 | 86 | 2 | 1 | 148 | 26 | 167 | 4.61e-27 | 101 |
| MS.gene85109.t1 | AT5G10260 | 37.838 | 148 | 85 | 2 | 1 | 148 | 26 | 166 | 1.68e-26 | 99.8 |
| MS.gene85109.t1 | AT5G47960 | 36.486 | 148 | 87 | 3 | 1 | 148 | 32 | 172 | 2.32e-26 | 99.8 |
| MS.gene85109.t1 | AT1G18200 | 39.310 | 145 | 81 | 3 | 1 | 145 | 30 | 167 | 2.45e-26 | 99.8 |
| MS.gene85109.t1 | AT4G18430 | 34.459 | 148 | 90 | 3 | 1 | 148 | 30 | 170 | 2.65e-26 | 99.4 |
| MS.gene85109.t1 | AT5G03520 | 41.791 | 134 | 72 | 3 | 18 | 151 | 49 | 176 | 4.28e-26 | 99.0 |
| MS.gene85109.t1 | AT1G06400 | 37.086 | 151 | 87 | 4 | 1 | 150 | 30 | 173 | 5.24e-26 | 98.6 |
| MS.gene85109.t1 | AT4G39990 | 35.811 | 148 | 88 | 3 | 1 | 148 | 34 | 174 | 5.33e-26 | 99.0 |
| MS.gene85109.t1 | AT2G43130 | 34.194 | 155 | 95 | 3 | 1 | 155 | 29 | 176 | 6.83e-26 | 98.2 |
| MS.gene85109.t1 | AT4G18800 | 37.086 | 151 | 87 | 4 | 1 | 150 | 30 | 173 | 8.11e-26 | 98.2 |
| MS.gene85109.t1 | AT2G22290 | 37.838 | 148 | 85 | 2 | 1 | 148 | 26 | 166 | 1.23e-25 | 97.4 |
| MS.gene85109.t1 | AT4G35860 | 35.294 | 153 | 92 | 3 | 3 | 155 | 25 | 170 | 1.52e-25 | 97.4 |
| MS.gene85109.t1 | AT1G16920 | 36.424 | 151 | 88 | 5 | 1 | 150 | 30 | 173 | 2.22e-25 | 97.1 |
| MS.gene85109.t1 | AT5G65270 | 35.135 | 148 | 89 | 3 | 1 | 148 | 34 | 174 | 2.30e-25 | 97.4 |
| MS.gene85109.t1 | AT3G09900 | 42.537 | 134 | 71 | 4 | 18 | 151 | 49 | 176 | 3.23e-25 | 96.7 |
| MS.gene85109.t1 | AT5G64990 | 41.358 | 162 | 71 | 6 | 8 | 157 | 31 | 180 | 3.46e-25 | 96.3 |
| MS.gene85109.t1 | AT5G03520 | 41.667 | 132 | 71 | 3 | 20 | 151 | 41 | 166 | 3.82e-25 | 96.3 |
| MS.gene85109.t1 | AT4G17160 | 36.364 | 143 | 84 | 3 | 3 | 145 | 25 | 160 | 6.11e-25 | 95.5 |
| MS.gene85109.t1 | AT3G07410 | 34.194 | 155 | 95 | 3 | 1 | 155 | 29 | 176 | 7.03e-25 | 95.9 |
| MS.gene85109.t1 | AT5G45130 | 35.032 | 157 | 95 | 3 | 3 | 159 | 29 | 178 | 1.14e-24 | 94.7 |
| MS.gene85109.t1 | AT1G73640 | 37.931 | 145 | 83 | 3 | 1 | 145 | 30 | 167 | 1.18e-24 | 95.5 |
| MS.gene85109.t1 | AT5G45130 | 35.032 | 157 | 95 | 3 | 3 | 159 | 37 | 186 | 2.03e-24 | 94.4 |
| MS.gene85109.t1 | AT5G47520 | 34.667 | 150 | 91 | 3 | 1 | 150 | 31 | 173 | 3.71e-24 | 94.0 |
| MS.gene85109.t1 | AT4G19640 | 34.395 | 157 | 96 | 3 | 3 | 159 | 29 | 178 | 4.12e-24 | 93.2 |
| MS.gene85109.t1 | AT4G17170 | 34.965 | 143 | 86 | 3 | 3 | 145 | 25 | 160 | 2.17e-23 | 91.7 |
| MS.gene85109.t1 | AT3G54840 | 33.333 | 156 | 96 | 4 | 3 | 157 | 18 | 166 | 2.05e-22 | 88.2 |
| MS.gene85109.t1 | AT5G59150 | 37.398 | 123 | 70 | 3 | 26 | 148 | 3 | 118 | 2.40e-22 | 87.8 |
| MS.gene85109.t1 | AT3G54840 | 34.247 | 146 | 88 | 4 | 3 | 147 | 52 | 190 | 3.78e-22 | 88.2 |
| MS.gene85109.t1 | AT3G54840 | 33.333 | 156 | 96 | 4 | 3 | 157 | 52 | 200 | 6.33e-22 | 87.8 |
| MS.gene85109.t1 | AT1G01200 | 33.793 | 145 | 90 | 2 | 1 | 145 | 45 | 183 | 1.18e-21 | 87.8 |
| MS.gene85109.t1 | AT4G35860 | 36.923 | 130 | 75 | 3 | 26 | 155 | 2 | 124 | 4.56e-21 | 84.7 |
| MS.gene85109.t1 | AT5G03530 | 36.585 | 164 | 79 | 6 | 16 | 160 | 44 | 201 | 7.74e-21 | 85.1 |
| MS.gene85109.t1 | AT5G03530 | 36.585 | 164 | 79 | 6 | 16 | 160 | 44 | 201 | 7.74e-21 | 85.1 |
| MS.gene85109.t1 | AT1G43890 | 38.636 | 132 | 74 | 4 | 16 | 146 | 44 | 169 | 3.33e-20 | 83.6 |
| MS.gene85109.t1 | AT1G43890 | 38.636 | 132 | 74 | 4 | 16 | 146 | 44 | 169 | 3.33e-20 | 83.6 |
| MS.gene85109.t1 | AT1G43890 | 38.636 | 132 | 74 | 4 | 16 | 146 | 44 | 169 | 3.33e-20 | 83.6 |
| MS.gene85109.t1 | AT4G19640 | 35.833 | 120 | 72 | 2 | 3 | 122 | 29 | 143 | 1.62e-19 | 80.1 |
| MS.gene85109.t1 | AT3G09910 | 36.170 | 141 | 83 | 4 | 16 | 155 | 44 | 178 | 1.19e-18 | 79.0 |
| MS.gene85109.t1 | AT3G09910 | 36.170 | 141 | 83 | 4 | 16 | 155 | 44 | 178 | 1.19e-18 | 79.0 |
| MS.gene85109.t1 | AT4G19640 | 37.864 | 103 | 60 | 1 | 3 | 105 | 29 | 127 | 2.35e-18 | 78.2 |
| MS.gene85109.t1 | AT3G09910 | 37.121 | 132 | 76 | 4 | 16 | 146 | 44 | 169 | 3.47e-18 | 78.2 |
| MS.gene85109.t1 | AT3G09910 | 37.121 | 132 | 76 | 4 | 16 | 146 | 44 | 169 | 3.47e-18 | 78.2 |
| MS.gene85109.t1 | AT3G09910 | 37.121 | 132 | 76 | 4 | 16 | 146 | 44 | 169 | 3.47e-18 | 78.2 |
| MS.gene85109.t1 | AT5G20010 | 29.655 | 145 | 92 | 3 | 1 | 145 | 30 | 164 | 1.46e-15 | 71.2 |
| MS.gene85109.t1 | AT5G55190 | 29.655 | 145 | 92 | 3 | 1 | 145 | 30 | 164 | 1.66e-15 | 71.2 |
| MS.gene85109.t1 | AT5G20020 | 29.655 | 145 | 92 | 3 | 1 | 145 | 30 | 164 | 1.69e-15 | 71.2 |
| MS.gene85109.t1 | AT4G28950 | 32.317 | 164 | 98 | 6 | 4 | 160 | 26 | 183 | 1.99e-15 | 70.9 |
| MS.gene85109.t1 | AT5G55080 | 27.586 | 145 | 95 | 3 | 1 | 145 | 30 | 164 | 3.28e-14 | 67.8 |
| MS.gene85109.t1 | AT5G45970 | 28.221 | 163 | 102 | 5 | 1 | 154 | 23 | 179 | 2.28e-12 | 62.4 |
| MS.gene85109.t1 | AT5G62880 | 31.250 | 160 | 95 | 5 | 4 | 154 | 28 | 181 | 1.23e-11 | 60.8 |
| MS.gene85109.t1 | AT3G48040 | 31.250 | 160 | 95 | 5 | 4 | 154 | 28 | 181 | 1.53e-11 | 60.5 |
| MS.gene85109.t1 | AT1G20090 | 27.778 | 162 | 102 | 5 | 1 | 153 | 22 | 177 | 5.24e-11 | 58.5 |
| MS.gene85109.t1 | AT4G35020 | 27.607 | 163 | 103 | 4 | 1 | 154 | 23 | 179 | 8.39e-11 | 58.2 |
| MS.gene85109.t1 | AT4G35020 | 27.607 | 163 | 103 | 4 | 1 | 154 | 23 | 179 | 8.39e-11 | 58.2 |
| MS.gene85109.t1 | AT4G35020 | 27.607 | 163 | 103 | 4 | 1 | 154 | 23 | 179 | 8.39e-11 | 58.2 |
| MS.gene85109.t1 | AT1G75840 | 27.778 | 162 | 102 | 5 | 1 | 153 | 23 | 178 | 9.24e-11 | 58.2 |
Find 38 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACTCACAATTCTTCTTC+AGG | 0.319718 | 2.3:-2256158 | None:intergenic |
| GCGAGAAGAGTTCCTTATTC+AGG | 0.320875 | 2.3:+2255691 | MS.gene85109:CDS |
| TTGTTTCCCAACACCACAAA+TGG | 0.348208 | 2.3:-2255828 | None:intergenic |
| ACTCTTCTCGCCAGTGGTTA+AGG | 0.372983 | 2.3:-2255679 | None:intergenic |
| TCCTGAAAACTTCCCATTTG+TGG | 0.376974 | 2.3:+2255815 | MS.gene85109:CDS |
| AGACAGGTTGTTCACATTGC+AGG | 0.381648 | 2.3:+2254201 | MS.gene85109:CDS |
| AAAGTTTAGTAATCAGTATA+AGG | 0.387117 | 2.3:+2254135 | MS.gene85109:CDS |
| TTTGCAGAGGTCTCAAAGTA+TGG | 0.397953 | 2.3:-2256074 | None:intergenic |
| AACTTCCCATTTGTGGTGTT+GGG | 0.400986 | 2.3:+2255822 | MS.gene85109:CDS |
| GTCTTCAACTTGAACTTCCT+TGG | 0.413731 | 2.3:-2254182 | None:intergenic |
| CAACTTGAACTTCCTTGGTA+AGG | 0.448202 | 2.3:-2254177 | None:intergenic |
| AAAGGCATGGTGTGCTTCCA+AGG | 0.464084 | 2.3:+2256043 | MS.gene85109:CDS |
| GATCTGGGATACTGCTGGTC+AGG | 0.467671 | 2.3:+2255565 | MS.gene85109:intron |
| CAGGAGAGGTTTCAAAGTCT+TGG | 0.475629 | 2.3:+2255584 | MS.gene85109:CDS |
| AAACTTCCCATTTGTGGTGT+TGG | 0.495054 | 2.3:+2255821 | MS.gene85109:CDS |
| GGAAACAAAGTAGATGTTGA+TGG | 0.512592 | 2.3:+2255843 | MS.gene85109:CDS |
| CTTTGAGACCTCTGCAAAGG+AGG | 0.516360 | 2.3:+2256079 | MS.gene85109:CDS |
| AAAGTATGGTATATTCCCCT+TGG | 0.522925 | 2.3:-2256060 | None:intergenic |
| AGGAAGTTCAAGTTGAAGAC+AGG | 0.529226 | 2.3:+2254185 | MS.gene85109:CDS |
| TGTTTCCCAACACCACAAAT+GGG | 0.537488 | 2.3:-2255827 | None:intergenic |
| ATGCAGATCTGGGATACTGC+TGG | 0.566605 | 2.3:+2255560 | MS.gene85109:intron |
| GAGGTTTCAAAGTCTTGGTG+TGG | 0.576541 | 2.3:+2255589 | MS.gene85109:CDS |
| CTTGGTGTGGCTTTCTACCG+AGG | 0.578330 | 2.3:+2255602 | MS.gene85109:CDS |
| AATCAGTATAAGGCTACCAT+TGG | 0.580849 | 2.3:+2254145 | MS.gene85109:CDS |
| TTTGAGACCTCTGCAAAGGA+GGG | 0.585589 | 2.3:+2256080 | MS.gene85109:CDS |
| AAGGCATGGTGTGCTTCCAA+GGG | 0.586547 | 2.3:+2256044 | MS.gene85109:CDS |
| GGTAAGGAAATCAGCACCAA+TGG | 0.599639 | 2.3:-2254161 | None:intergenic |
| AACAAAGTAGATGTTGATGG+TGG | 0.603728 | 2.3:+2255846 | MS.gene85109:CDS |
| CTGAGAAGAAAGCAAAGGCA+TGG | 0.611252 | 2.3:+2256030 | MS.gene85109:CDS |
| TAAGGAACTCTTCTCGCCAG+TGG | 0.617763 | 2.3:-2255685 | None:intergenic |
| GGGATACTGCTGGTCAGGAG+AGG | 0.630015 | 2.3:+2255570 | MS.gene85109:CDS |
| TGGTGCTGATTTCCTTACCA+AGG | 0.632236 | 2.3:+2254165 | MS.gene85109:CDS |
| GGTTTCTGAGAAGAAAGCAA+AGG | 0.639361 | 2.3:+2256025 | MS.gene85109:intron |
| ATTAAAACCCTCCTTTGCAG+AGG | 0.646100 | 2.3:-2256087 | None:intergenic |
| ATACTTTGAGACCTCTGCAA+AGG | 0.653339 | 2.3:+2256076 | MS.gene85109:CDS |
| TGACATTTACATCATAAACA+AGG | 0.673979 | 2.3:-2255640 | None:intergenic |
| GGACACAGCAATCTGCACCT+CGG | 0.707086 | 2.3:-2255619 | None:intergenic |
| AGGCATGGTGTGCTTCCAAG+GGG | 0.713588 | 2.3:+2256045 | MS.gene85109:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATAAATAAATAATTGA+AGG | + | chr2.3:2255203-2255222 | MS.gene85109:intron | 10.0% |
| !! | AATTATGTATGTAATATGAA+AGG | + | chr2.3:2255443-2255462 | MS.gene85109:intron | 15.0% |
| !! | ATTATGTATGTAATATGAAA+GGG | + | chr2.3:2255444-2255463 | MS.gene85109:intron | 15.0% |
| !! | TTCATATTACATACATAATT+AGG | - | chr2.3:2255443-2255462 | None:intergenic | 15.0% |
| !! | AAAGTTTAGTAATCAGTATA+AGG | + | chr2.3:2254135-2254154 | MS.gene85109:CDS | 20.0% |
| !! | CTACATGTTAAATGTTAATA+GGG | - | chr2.3:2254678-2254697 | None:intergenic | 20.0% |
| !!! | ACCTAATTGATTTGATTTTT+AGG | + | chr2.3:2255779-2255798 | MS.gene85109:intron | 20.0% |
| !!! | ATATATTTTGACATTGAGAA+TGG | - | chr2.3:2254649-2254668 | None:intergenic | 20.0% |
| !!! | ATTACTATCAGCTTTTAAAT+AGG | - | chr2.3:2254764-2254783 | None:intergenic | 20.0% |
| !!! | GAATTCTGAAAAATAATTTG+AGG | - | chr2.3:2255900-2255919 | None:intergenic | 20.0% |
| ! | AGTTTATACCCAAAAAAACA+GGG | - | chr2.3:2254804-2254823 | None:intergenic | 25.0% |
| ! | ATCTTAACACAATTTCTGAA+GGG | + | chr2.3:2255740-2255759 | MS.gene85109:intron | 25.0% |
| ! | GAATAAAAATCACCTGAATA+AGG | - | chr2.3:2255706-2255725 | None:intergenic | 25.0% |
| ! | GAGATAAATAACTTACAACT+CGG | - | chr2.3:2255878-2255897 | None:intergenic | 25.0% |
| ! | GATCCATTTAATCAATACAA+TGG | - | chr2.3:2255414-2255433 | None:intergenic | 25.0% |
| ! | GCCTAAAAATCAAATCAATT+AGG | - | chr2.3:2255783-2255802 | None:intergenic | 25.0% |
| ! | GCTACATGTTAAATGTTAAT+AGG | - | chr2.3:2254679-2254698 | None:intergenic | 25.0% |
| ! | TAGTTTATACCCAAAAAAAC+AGG | - | chr2.3:2254805-2254824 | None:intergenic | 25.0% |
| ! | TCCTAAAACATGTCATATAT+TGG | - | chr2.3:2254257-2254276 | None:intergenic | 25.0% |
| ! | TGACATTTACATCATAAACA+AGG | - | chr2.3:2255643-2255662 | None:intergenic | 25.0% |
| ! | TGATATTCTGACATCAATTT+GGG | - | chr2.3:2254716-2254735 | None:intergenic | 25.0% |
| !! | AAATTCATGTTTCTTTTTCC+TGG | + | chr2.3:2255356-2255375 | MS.gene85109:intron | 25.0% |
| !! | CTTTTGTCTAAGAAAGATAA+AGG | - | chr2.3:2255013-2255032 | None:intergenic | 25.0% |
| !! | TATCAAAAAACAAAGTGTCA+TGG | - | chr2.3:2255262-2255281 | None:intergenic | 25.0% |
| !! | TCCAATATATGACATGTTTT+AGG | + | chr2.3:2254253-2254272 | MS.gene85109:intron | 25.0% |
| !! | TTCAGGTGATTTTTATTCTT+TGG | + | chr2.3:2255708-2255727 | MS.gene85109:intron | 25.0% |
| !!! | AGACCATTGTATTGATTAAA+TGG | + | chr2.3:2255408-2255427 | MS.gene85109:intron | 25.0% |
| AACAAGGTTTAAGAAGCTAT+TGG | + | chr2.3:2255110-2255129 | MS.gene85109:intron | 30.0% | |
| ACAAGGTTTAAGAAGCTATT+GGG | + | chr2.3:2255111-2255130 | MS.gene85109:intron | 30.0% | |
| ACACTGTCGTAAATTGTAAT+CGG | - | chr2.3:2254566-2254585 | None:intergenic | 30.0% | |
| AGATTCTTGAGCAATATGTT+TGG | - | chr2.3:2255179-2255198 | None:intergenic | 30.0% | |
| AGTCTATCAACTACATATGA+TGG | - | chr2.3:2255922-2255941 | None:intergenic | 30.0% | |
| ATATGCCTAGATATGTATCT+AGG | - | chr2.3:2255235-2255254 | None:intergenic | 30.0% | |
| CAATATTAAGTGTATGACCT+TGG | - | chr2.3:2254373-2254392 | None:intergenic | 30.0% | |
| CATGTCATATATTGGAAACA+CGG | - | chr2.3:2254249-2254268 | None:intergenic | 30.0% | |
| CTTAGACAAAAGTCAAATGT+TGG | + | chr2.3:2255021-2255040 | MS.gene85109:intron | 30.0% | |
| GACAAATGTTAGTAAGTTAG+CGG | + | chr2.3:2254318-2254337 | MS.gene85109:intron | 30.0% | |
| GAGAATGGAAAAAAGAAGTA+TGG | - | chr2.3:2254634-2254653 | None:intergenic | 30.0% | |
| GATATCTCTTCAATGTGATT+TGG | - | chr2.3:2255156-2255175 | None:intergenic | 30.0% | |
| GATCTTAACACAATTTCTGA+AGG | + | chr2.3:2255739-2255758 | MS.gene85109:intron | 30.0% | |
| GATTCTTGAGCAATATGTTT+GGG | - | chr2.3:2255178-2255197 | None:intergenic | 30.0% | |
| GTGATATTCTGACATCAATT+TGG | - | chr2.3:2254717-2254736 | None:intergenic | 30.0% | |
| TACTTCCTAGATACATATCT+AGG | + | chr2.3:2255227-2255246 | MS.gene85109:intron | 30.0% | |
| TCACTACATGATGAAAAACA+AGG | + | chr2.3:2255094-2255113 | MS.gene85109:intron | 30.0% | |
| ! | AATTTAATCCTGTGCACTTT+TGG | + | chr2.3:2255054-2255073 | MS.gene85109:intron | 30.0% |
| ! | TATCAGCTTTTAAATAGGAC+TGG | - | chr2.3:2254759-2254778 | None:intergenic | 30.0% |
| !! | ACAAAAGCATCTTCTAACTT+TGG | + | chr2.3:2254881-2254900 | MS.gene85109:intron | 30.0% |
| !!! | GTTTTAGGATCTATAAAGCT+CGG | + | chr2.3:2254268-2254287 | MS.gene85109:intron | 30.0% |
| !!! | TTCATCTACCCTGTTTTTTT+GGG | + | chr2.3:2254793-2254812 | MS.gene85109:intron | 30.0% |
| !!! | TTCATTCTTGAGAGCATTTT+TGG | - | chr2.3:2256138-2256157 | None:intergenic | 30.0% |
| !!! | TTTCATCTACCCTGTTTTTT+TGG | + | chr2.3:2254792-2254811 | MS.gene85109:intron | 30.0% |
| AAAGTATGGTATATTCCCCT+TGG | - | chr2.3:2256063-2256082 | None:intergenic | 35.0% | |
| AATCAGTATAAGGCTACCAT+TGG | + | chr2.3:2254145-2254164 | MS.gene85109:CDS | 35.0% | |
| ATGTAGTGAGAGGAACAAAA+TGG | - | chr2.3:2255083-2255102 | None:intergenic | 35.0% | |
| ATTAAGTGTATGACCTTGGT+AGG | - | chr2.3:2254369-2254388 | None:intergenic | 35.0% | |
| GAGACAAGAATGTCAAACAT+TGG | - | chr2.3:2254977-2254996 | None:intergenic | 35.0% | |
| GGAAACAAAGTAGATGTTGA+TGG | + | chr2.3:2255843-2255862 | MS.gene85109:CDS | 35.0% | |
| GTAATCGGCATCAACTAATT+CGG | - | chr2.3:2254551-2254570 | None:intergenic | 35.0% | |
| GTACTTGAGATATGATGACA+TGG | + | chr2.3:2255326-2255345 | MS.gene85109:intron | 35.0% | |
| TCTGATTTACCATATGCTCA+CGG | + | chr2.3:2255960-2255979 | MS.gene85109:intron | 35.0% | |
| TGAGATATGATGACATGGTT+GGG | + | chr2.3:2255331-2255350 | MS.gene85109:intron | 35.0% | |
| TTGAGATATGATGACATGGT+TGG | + | chr2.3:2255330-2255349 | MS.gene85109:intron | 35.0% | |
| ! | AACAAAGTAGATGTTGATGG+TGG | + | chr2.3:2255846-2255865 | MS.gene85109:CDS | 35.0% |
| ! | GTTTTTCATCATGTAGTGAG+AGG | - | chr2.3:2255093-2255112 | None:intergenic | 35.0% |
| ! | TTAACACAATTTCTGAAGGG+CGG | + | chr2.3:2255743-2255762 | MS.gene85109:intron | 35.0% |
| ! | TTTAAATAGGACTGGTGAAG+TGG | - | chr2.3:2254751-2254770 | None:intergenic | 35.0% |
| ! | TTTTGTGACTAGTGTGAACA+AGG | - | chr2.3:2254867-2254886 | None:intergenic | 35.0% |
| !! | AAAGGAGGGTTTTAATGTTG+AGG | + | chr2.3:2256094-2256113 | MS.gene85109:CDS | 35.0% |
| !! | CTTTTGAAAACCTTAACCAC+TGG | + | chr2.3:2255669-2255688 | MS.gene85109:CDS | 35.0% |
| !!! | AAGCATCGATCTTTTTATCC+AGG | - | chr2.3:2255377-2255396 | None:intergenic | 35.0% |
| AAACTTCCCATTTGTGGTGT+TGG | + | chr2.3:2255821-2255840 | MS.gene85109:CDS | 40.0% | |
| AACTTCCCATTTGTGGTGTT+GGG | + | chr2.3:2255822-2255841 | MS.gene85109:CDS | 40.0% | |
| AGACTTTCTTCCTCTTGAGA+GGG | + | chr2.3:2255937-2255956 | MS.gene85109:intron | 40.0% | |
| AGTCTGTGCTTCTTTCGTTA+CGG | - | chr2.3:2254597-2254616 | None:intergenic | 40.0% | |
| ATTAAAACCCTCCTTTGCAG+AGG | - | chr2.3:2256090-2256109 | None:intergenic | 40.0% | |
| CAACTTGAACTTCCTTGGTA+AGG | - | chr2.3:2254180-2254199 | None:intergenic | 40.0% | |
| CTGATTTACCATATGCTCAC+GGG | + | chr2.3:2255961-2255980 | MS.gene85109:intron | 40.0% | |
| GTCTTCAACTTGAACTTCCT+TGG | - | chr2.3:2254185-2254204 | None:intergenic | 40.0% | |
| TAGACTTTCTTCCTCTTGAG+AGG | + | chr2.3:2255936-2255955 | MS.gene85109:intron | 40.0% | |
| TCCTGAAAACTTCCCATTTG+TGG | + | chr2.3:2255815-2255834 | MS.gene85109:CDS | 40.0% | |
| TCGACGAGACAACACATATA+CGG | + | chr2.3:2254397-2254416 | MS.gene85109:intron | 40.0% | |
| TGATTTACCATATGCTCACG+GGG | + | chr2.3:2255962-2255981 | MS.gene85109:intron | 40.0% | |
| TGTTTCCCAACACCACAAAT+GGG | - | chr2.3:2255830-2255849 | None:intergenic | 40.0% | |
| TTACATGACCCACTTGAAGA+TGG | - | chr2.3:2254947-2254966 | None:intergenic | 40.0% | |
| TTGTTTCCCAACACCACAAA+TGG | - | chr2.3:2255831-2255850 | None:intergenic | 40.0% | |
| TTTGCAGAGGTCTCAAAGTA+TGG | - | chr2.3:2256077-2256096 | None:intergenic | 40.0% | |
| ! | AATGGATTCCAAAAGTGCAC+AGG | - | chr2.3:2255065-2255084 | None:intergenic | 40.0% |
| ! | ACCACAAATGGGAAGTTTTC+AGG | - | chr2.3:2255819-2255838 | None:intergenic | 40.0% |
| ! | GAAGCTATTGGGCATGTTTT+TGG | + | chr2.3:2255122-2255141 | MS.gene85109:intron | 40.0% |
| ! | GCATTTGTTGCTTCTGTTTC+AGG | + | chr2.3:2256004-2256023 | MS.gene85109:intron | 40.0% |
| ! | GGTTTCTGAGAAGAAAGCAA+AGG | + | chr2.3:2256025-2256044 | MS.gene85109:intron | 40.0% |
| !! | AGGAAGTTCAAGTTGAAGAC+AGG | + | chr2.3:2254185-2254204 | MS.gene85109:CDS | 40.0% |
| !! | ATACTTTGAGACCTCTGCAA+AGG | + | chr2.3:2256076-2256095 | MS.gene85109:CDS | 40.0% |
| ACCAATTGAGCTTCCTACCA+AGG | + | chr2.3:2254353-2254372 | MS.gene85109:intron | 45.0% | |
| ACCTTGGTAGGAAGCTCAAT+TGG | - | chr2.3:2254357-2254376 | None:intergenic | 45.0% | |
| AGACAGGTTGTTCACATTGC+AGG | + | chr2.3:2254201-2254220 | MS.gene85109:CDS | 45.0% | |
| AGTTCACCACCATCTTCAAG+TGG | + | chr2.3:2254935-2254954 | MS.gene85109:intron | 45.0% | |
| ATTTACCATATGCTCACGGG+GGG | + | chr2.3:2255964-2255983 | MS.gene85109:intron | 45.0% | |
| CAGGAGAGGTTTCAAAGTCT+TGG | + | chr2.3:2255584-2255603 | MS.gene85109:CDS | 45.0% | |
| CGACGAGACAACACATATAC+GGG | + | chr2.3:2254398-2254417 | MS.gene85109:intron | 45.0% | |
| CGTTGTGTACATGCAGATCT+GGG | + | chr2.3:2255550-2255569 | MS.gene85109:intron | 45.0% | |
| CTGAGAAGAAAGCAAAGGCA+TGG | + | chr2.3:2256030-2256049 | MS.gene85109:CDS | 45.0% | |
| GAGGTTTCAAAGTCTTGGTG+TGG | + | chr2.3:2255589-2255608 | MS.gene85109:CDS | 45.0% | |
| GATTTACCATATGCTCACGG+GGG | + | chr2.3:2255963-2255982 | MS.gene85109:intron | 45.0% | |
| GCGAGAAGAGTTCCTTATTC+AGG | + | chr2.3:2255691-2255710 | MS.gene85109:CDS | 45.0% | |
| GGTAAGGAAATCAGCACCAA+TGG | - | chr2.3:2254164-2254183 | None:intergenic | 45.0% | |
| GTAAATCAGACCCTCTCAAG+AGG | - | chr2.3:2255950-2255969 | None:intergenic | 45.0% | |
| GTCTGTGCTTCTTTCGTTAC+GGG | - | chr2.3:2254596-2254615 | None:intergenic | 45.0% | |
| GTTCACCACCATCTTCAAGT+GGG | + | chr2.3:2254936-2254955 | MS.gene85109:intron | 45.0% | |
| TCGTTGTGTACATGCAGATC+TGG | + | chr2.3:2255549-2255568 | MS.gene85109:intron | 45.0% | |
| ! | TGGTGGTGAACTTCATGAAC+AGG | - | chr2.3:2254927-2254946 | None:intergenic | 45.0% |
| ! | TTTGAGACCTCTGCAAAGGA+GGG | + | chr2.3:2256080-2256099 | MS.gene85109:CDS | 45.0% |
| !! | GGGAAGTTTTCAGGATCAGA+TGG | - | chr2.3:2255810-2255829 | None:intergenic | 45.0% |
| !! | TGGTGCTGATTTCCTTACCA+AGG | + | chr2.3:2254165-2254184 | MS.gene85109:CDS | 45.0% |
| AAGGCATGGTGTGCTTCCAA+GGG | + | chr2.3:2256044-2256063 | MS.gene85109:CDS | 50.0% | |
| ACTCTTCTCGCCAGTGGTTA+AGG | - | chr2.3:2255682-2255701 | None:intergenic | 50.0% | |
| CATGACCCACTTGAAGATGG+TGG | - | chr2.3:2254944-2254963 | None:intergenic | 50.0% | |
| TAAGGAACTCTTCTCGCCAG+TGG | - | chr2.3:2255688-2255707 | None:intergenic | 50.0% | |
| TTTACCATATGCTCACGGGG+GGG | + | chr2.3:2255965-2255984 | MS.gene85109:intron | 50.0% | |
| ! | AAAGGCATGGTGTGCTTCCA+AGG | + | chr2.3:2256043-2256062 | MS.gene85109:CDS | 50.0% |
| ! | ATGCAGATCTGGGATACTGC+TGG | + | chr2.3:2255560-2255579 | MS.gene85109:intron | 50.0% |
| ! | TAGGACTGGTGAAGTGGTGA+TGG | - | chr2.3:2254745-2254764 | None:intergenic | 50.0% |
| !! | CTTTGAGACCTCTGCAAAGG+AGG | + | chr2.3:2256079-2256098 | MS.gene85109:CDS | 50.0% |
| AGGCATGGTGTGCTTCCAAG+GGG | + | chr2.3:2256045-2256064 | MS.gene85109:CDS | 55.0% | |
| GGACACAGCAATCTGCACCT+CGG | - | chr2.3:2255622-2255641 | None:intergenic | 55.0% | |
| TTAACCCCCCCGTGAGCATA+TGG | - | chr2.3:2255972-2255991 | None:intergenic | 55.0% | |
| ! | CTTGGTGTGGCTTTCTACCG+AGG | + | chr2.3:2255602-2255621 | MS.gene85109:CDS | 55.0% |
| ! | GATCTGGGATACTGCTGGTC+AGG | + | chr2.3:2255565-2255584 | MS.gene85109:intron | 55.0% |
| GGGATACTGCTGGTCAGGAG+AGG | + | chr2.3:2255570-2255589 | MS.gene85109:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 2254115 | 2256171 | 2254115 | ID=MS.gene85109 |
| chr2.3 | mRNA | 2254115 | 2256171 | 2254115 | ID=MS.gene85109.t1;Parent=MS.gene85109 |
| chr2.3 | exon | 2254115 | 2254222 | 2254115 | ID=MS.gene85109.t1.exon1;Parent=MS.gene85109.t1 |
| chr2.3 | CDS | 2254115 | 2254222 | 2254115 | ID=cds.MS.gene85109.t1;Parent=MS.gene85109.t1 |
| chr2.3 | exon | 2255566 | 2255712 | 2255566 | ID=MS.gene85109.t1.exon2;Parent=MS.gene85109.t1 |
| chr2.3 | CDS | 2255566 | 2255712 | 2255566 | ID=cds.MS.gene85109.t1;Parent=MS.gene85109.t1 |
| chr2.3 | exon | 2255801 | 2255881 | 2255801 | ID=MS.gene85109.t1.exon3;Parent=MS.gene85109.t1 |
| chr2.3 | CDS | 2255801 | 2255881 | 2255801 | ID=cds.MS.gene85109.t1;Parent=MS.gene85109.t1 |
| chr2.3 | exon | 2256026 | 2256171 | 2256026 | ID=MS.gene85109.t1.exon4;Parent=MS.gene85109.t1 |
| chr2.3 | CDS | 2256026 | 2256171 | 2256026 | ID=cds.MS.gene85109.t1;Parent=MS.gene85109.t1 |
| Gene Sequence |
| Protein sequence |
