Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85370.t1 | XP_024631787.1 | 83.2 | 519 | 84 | 2 | 1 | 519 | 1 | 516 | 4.90E-212 | 747.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85370.t1 | A0A396JB29 | 83.2 | 519 | 84 | 2 | 1 | 519 | 1 | 516 | 3.5e-212 | 747.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene85370 | 0.822949 | 1.80E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene85370 | 0.817672 | 2.92E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene85370 | 0.800642 | 1.31E-48 | -1.69E-46 |
| MS.gene049661 | MS.gene85370 | 0.829553 | 4.83E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene85370 | 0.813083 | 3.06E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene85370 | 0.808231 | 3.43E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene85370 | 0.822682 | 2.08E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene85370 | 0.851586 | 8.06E-61 | -1.69E-46 |
| MS.gene050432 | MS.gene85370 | 0.828821 | 7.26E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene85370 | 0.806407 | 8.35E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene85370 | 0.802229 | 6.20E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene85370 | 0.801665 | 8.09E-49 | -1.69E-46 |
| MS.gene051255 | MS.gene85370 | 0.801195 | 1.01E-48 | -1.69E-46 |
| MS.gene051810 | MS.gene85370 | 0.812534 | 4.04E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene85370 | 0.834685 | 2.60E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene85370 | 0.811486 | 6.83E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene85370 | 0.815656 | 8.27E-52 | -1.69E-46 |
| MS.gene052322 | MS.gene85370 | 0.815768 | 7.81E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene85370 | 0.823834 | 1.12E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene85370 | 0.806931 | 6.47E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene85370 | 0.828387 | 9.25E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene85370 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene85370 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene85370 | 0.811314 | 7.45E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene85370 | 0.80022 | 1.60E-48 | -1.69E-46 |
| MS.gene053758 | MS.gene85370 | 0.812952 | 3.27E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene85370 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene054802 | MS.gene85370 | 0.815062 | 1.12E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene85370 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene85370 | 0.815895 | 7.31E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene85370 | 0.806153 | 9.44E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene85370 | 0.827567 | 1.46E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene85370 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene85370 | 0.854872 | 9.22E-62 | -1.69E-46 |
| MS.gene055397 | MS.gene85370 | 0.832442 | 9.43E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene85370 | 0.818131 | 2.30E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene85370 | 0.822238 | 2.64E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene85370 | 0.806196 | 9.25E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene85370 | 0.805649 | 1.21E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene85370 | 0.834111 | 3.62E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene85370 | 0.80488 | 1.75E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene85370 | 0.812908 | 3.35E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene85370 | 0.806119 | 9.60E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene85370 | 0.806472 | 8.09E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene85370 | 0.80726 | 5.51E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene85370 | 0.815868 | 7.41E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene85370 | 0.823869 | 1.10E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene85370 | 0.821931 | 3.10E-53 | -1.69E-46 |
| MS.gene058993 | MS.gene85370 | 0.803517 | 3.36E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene85370 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene85370 | 0.803346 | 3.64E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene85370 | 0.828797 | 7.36E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene85370 | 0.81371 | 2.23E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene85370 | 0.832281 | 1.03E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene85370 | 0.856092 | 4.06E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene85370 | 0.818325 | 2.08E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene85370 | 0.811459 | 6.93E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85370.t1 | MTR_2g038710 | 80.295 | 543 | 80 | 3 | 1 | 519 | 1 | 540 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85370.t1 | AT5G56850 | 46.094 | 128 | 64 | 2 | 1 | 123 | 1 | 128 | 8.83e-31 | 126 |
| MS.gene85370.t1 | AT5G56850 | 46.094 | 128 | 64 | 2 | 1 | 123 | 1 | 128 | 1.25e-30 | 125 |
| MS.gene85370.t1 | AT5G56850 | 46.094 | 128 | 64 | 2 | 1 | 123 | 1 | 128 | 1.25e-30 | 125 |
| MS.gene85370.t1 | AT5G56850 | 42.683 | 82 | 46 | 1 | 43 | 123 | 5 | 86 | 8.90e-15 | 77.4 |
Find 106 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAACAGTTACAGTTTC+AGG | 0.156880 | 2.1:-47338382 | MS.gene85370:CDS |
| AACCAACAGGACTTGGTAAT+TGG | 0.200786 | 2.1:+47339792 | None:intergenic |
| ATCTGGCAGGAGTACATTTA+AGG | 0.225316 | 2.1:-47341053 | MS.gene85370:intron |
| GGACTTACTTGATACTTTAT+TGG | 0.234536 | 2.1:+47338730 | None:intergenic |
| TGTTTGTTCGGTATATTTAT+AGG | 0.241946 | 2.1:+47338520 | None:intergenic |
| ATCAAAGAAGTTTGGATTTC+CGG | 0.252286 | 2.1:-47338288 | MS.gene85370:CDS |
| TGCAGCTTCCATGGGGAAAA+TGG | 0.272636 | 2.1:-47341519 | MS.gene85370:intron |
| AGAACATTGCAGATCAATAT+AGG | 0.285969 | 2.1:-47339434 | MS.gene85370:CDS |
| TATTATAGTGCTGGAATTCA+TGG | 0.287052 | 2.1:-47341670 | MS.gene85370:intron |
| CCAGGAACAATCCTGGTTTC+AGG | 0.291918 | 2.1:-47341774 | MS.gene85370:intron |
| AGTTTAGCTGTTTCTGTTCA+AGG | 0.295146 | 2.1:+47339723 | None:intergenic |
| CTCAAGCCATCAAAGAAGTT+TGG | 0.303084 | 2.1:-47338296 | MS.gene85370:CDS |
| AGTCAATAGCATACCCCTTA+TGG | 0.304434 | 2.1:+47341623 | None:intergenic |
| TCAGTTCCAGTTTCAGTATA+TGG | 0.306914 | 2.1:+47338149 | None:intergenic |
| CCCTGGTTGAACCTTCTTCT+CGG | 0.314639 | 2.1:+47339188 | None:intergenic |
| GATAACAGAGATGAAAATTC+TGG | 0.321341 | 2.1:-47338065 | MS.gene85370:CDS |
| AATGTACCATATACTGAAAC+TGG | 0.331288 | 2.1:-47338155 | MS.gene85370:CDS |
| TTCTTCTGAGAGTCAACATT+TGG | 0.331749 | 2.1:-47338692 | MS.gene85370:CDS |
| GTTTGTTCGGTATATTTATA+GGG | 0.335439 | 2.1:+47338521 | None:intergenic |
| CACCTCATCACTAGTGCTTA+AGG | 0.341279 | 2.1:+47340014 | None:intergenic |
| GGAAATCCAAACTTCTTTGA+TGG | 0.341451 | 2.1:+47338290 | None:intergenic |
| CAGGAGGCTTCTTACAAGAT+AGG | 0.348900 | 2.1:-47338642 | MS.gene85370:CDS |
| ATGGATGTTGATGAAGAAAA+TGG | 0.359964 | 2.1:+47341642 | None:intergenic |
| GAACATTGCAGATCAATATA+GGG | 0.363626 | 2.1:-47339433 | MS.gene85370:CDS |
| TTCTTCATCAACATCCATAA+GGG | 0.368786 | 2.1:-47341637 | MS.gene85370:CDS |
| CGGTCATTGAACACAGAATC+AGG | 0.368862 | 2.1:-47338661 | MS.gene85370:CDS |
| AAACAACCGCAGAGAGTTAC+TGG | 0.385233 | 2.1:-47339318 | MS.gene85370:CDS |
| GATATTACAGAAAGGTGTTT+GGG | 0.386096 | 2.1:-47341028 | MS.gene85370:CDS |
| TTTGAATCTGTTTGTTTGTT+CGG | 0.386957 | 2.1:+47338508 | None:intergenic |
| TGATATTACAGAAAGGTGTT+TGG | 0.387833 | 2.1:-47341029 | MS.gene85370:CDS |
| AATTAAGGACACCGTGCAAT+TGG | 0.388794 | 2.1:-47338551 | MS.gene85370:CDS |
| TCTTGTTGAAGATGTTGCTT+TGG | 0.395166 | 2.1:+47339824 | None:intergenic |
| AGAAAGTAAAGCGAAAATTA+AGG | 0.399900 | 2.1:-47338566 | MS.gene85370:CDS |
| CCTGAAACCAGGATTGTTCC+TGG | 0.408939 | 2.1:+47341774 | None:intergenic |
| TTTCTTCATCAACATCCATA+AGG | 0.416458 | 2.1:-47341638 | MS.gene85370:CDS |
| TTACTTTCTTCAATATGTAC+TGG | 0.418098 | 2.1:+47338580 | None:intergenic |
| ACCAACAGGACTTGGTAATT+GGG | 0.427446 | 2.1:+47339793 | None:intergenic |
| TCGTCACGAAGGCTAGTTAT+GGG | 0.427962 | 2.1:+47341219 | None:intergenic |
| AGTTTCAGGAAACATGCCTT+TGG | 0.433052 | 2.1:-47338368 | MS.gene85370:CDS |
| GGAGAACTCCTAGCAATGTT+AGG | 0.443960 | 2.1:-47339167 | MS.gene85370:CDS |
| TTCTGGAGGACCATTTGATC+AGG | 0.446366 | 2.1:-47338048 | MS.gene85370:CDS |
| TTTCTCAGATGATGACTCAT+TGG | 0.450749 | 2.1:+47339338 | None:intergenic |
| TGTCACTTTCTGCACCTCTC+TGG | 0.454237 | 2.1:+47340067 | None:intergenic |
| TCAGATGATGACTCATTGGC+AGG | 0.455034 | 2.1:+47339342 | None:intergenic |
| CTTGGTAAGAAACTTGCAAC+AGG | 0.456620 | 2.1:-47338605 | MS.gene85370:CDS |
| ACCTCATCACTAGTGCTTAA+GGG | 0.458027 | 2.1:+47340015 | None:intergenic |
| TAGGGTGAAAAGTGCTTCCT+TGG | 0.458095 | 2.1:-47338623 | MS.gene85370:CDS |
| AACAAAATAGAGGATGATAT+TGG | 0.459901 | 2.1:-47339222 | MS.gene85370:CDS |
| GTTATCATCAGTAGAAGTAC+TGG | 0.459966 | 2.1:+47338082 | None:intergenic |
| GAAAATAGAAAATGTGGATA+AGG | 0.463355 | 2.1:-47338266 | MS.gene85370:intron |
| TTTAAAATTCAGGATTCTGA+AGG | 0.468257 | 2.1:-47341189 | MS.gene85370:CDS |
| AGAAATACTCTTAACCATCT+AGG | 0.471217 | 2.1:-47338334 | MS.gene85370:CDS |
| TGGGAAGACATGTTTCCACT+TGG | 0.475277 | 2.1:-47341009 | MS.gene85370:CDS |
| TTGATGATAACCTGATCAAA+TGG | 0.477480 | 2.1:+47338038 | None:intergenic |
| AGCACTAGTGATGAGGTGTC+AGG | 0.478655 | 2.1:-47340009 | MS.gene85370:intron |
| AGCAAATAGTAGAGATCAAG+AGG | 0.484118 | 2.1:-47338443 | MS.gene85370:CDS |
| GTAAATGAATGCAGCTTCCA+TGG | 0.491324 | 2.1:-47341528 | MS.gene85370:intron |
| ACTTGATACTTTATTGGAGG+TGG | 0.493719 | 2.1:+47338736 | None:intergenic |
| CTTACTTGATACTTTATTGG+AGG | 0.495401 | 2.1:+47338733 | None:intergenic |
| ATCGTCACGAAGGCTAGTTA+TGG | 0.496539 | 2.1:+47341218 | None:intergenic |
| CGCCTCAACAACATTTGTTG+TGG | 0.496974 | 2.1:+47339748 | None:intergenic |
| TTGTCATCGGAGAAACCAAC+AGG | 0.498725 | 2.1:+47339779 | None:intergenic |
| TGTGGAACTTTCTTTGTCAT+CGG | 0.499342 | 2.1:+47339766 | None:intergenic |
| TCTTCAATATTCCGAGAAGA+AGG | 0.500643 | 2.1:-47339199 | MS.gene85370:CDS |
| GGGAAGACATGTTTCCACTT+GGG | 0.502659 | 2.1:-47341008 | MS.gene85370:CDS |
| TGCAATGCCAGGAACAATCC+TGG | 0.506580 | 2.1:-47341781 | None:intergenic |
| TCTGATACAAAACAAAATAG+AGG | 0.507430 | 2.1:-47339232 | MS.gene85370:CDS |
| TGAGAGTCAACATTTGGAGC+AGG | 0.514270 | 2.1:-47338686 | MS.gene85370:CDS |
| ATATTAACTGCTTGTGACAC+AGG | 0.523930 | 2.1:+47339393 | None:intergenic |
| GGAAGACATGTTTCCACTTG+GGG | 0.525712 | 2.1:-47341007 | MS.gene85370:CDS |
| ATTCTGCACCCTGCAATGCC+AGG | 0.526840 | 2.1:-47341792 | None:intergenic |
| AGGAGGCTTCTTACAAGATA+GGG | 0.528120 | 2.1:-47338641 | MS.gene85370:CDS |
| GTCAACATTTGGAGCAGGAT+CGG | 0.534338 | 2.1:-47338681 | MS.gene85370:CDS |
| TCGGAGAAACCAACAGGACT+TGG | 0.535044 | 2.1:+47339785 | None:intergenic |
| GAATTCTTACACAGGATATG+AGG | 0.555986 | 2.1:-47338771 | MS.gene85370:intron |
| TTTCCGGAAAATAGAAAATG+TGG | 0.558522 | 2.1:-47338272 | MS.gene85370:CDS |
| TTAAAATTCAGGATTCTGAA+GGG | 0.560085 | 2.1:-47341188 | MS.gene85370:CDS |
| TGAGGTGAGCAAGTATGAAA+AGG | 0.564247 | 2.1:-47338129 | MS.gene85370:CDS |
| AAGAAATAAAGATCAAGAAG+AGG | 0.565984 | 2.1:-47338482 | MS.gene85370:CDS |
| TAAATGAATGCAGCTTCCAT+GGG | 0.568354 | 2.1:-47341527 | MS.gene85370:intron |
| GGGAATGAAATATCGCGTGC+AGG | 0.574929 | 2.1:-47341168 | MS.gene85370:intron |
| GAGCAAGTATGAAAAGGTGC+AGG | 0.579255 | 2.1:-47338123 | MS.gene85370:CDS |
| TTAAGGTTGATATTACAGAA+AGG | 0.580085 | 2.1:-47341036 | MS.gene85370:CDS |
| TCCCAATTACCAAGTCCTGT+TGG | 0.581309 | 2.1:-47339794 | MS.gene85370:CDS |
| TTCCACAACAAATGTTGTTG+AGG | 0.582434 | 2.1:-47339750 | MS.gene85370:CDS |
| ACATTGCTAGGAGTTCTCCC+TGG | 0.599976 | 2.1:+47339171 | None:intergenic |
| TCTTCATCAACATCCATAAG+GGG | 0.601384 | 2.1:-47341636 | MS.gene85370:intron |
| TTTCTATCAGAGAGCTCCAA+AGG | 0.602700 | 2.1:+47338352 | None:intergenic |
| GCGTGACAGAATTCGTATGA+TGG | 0.603215 | 2.1:-47340938 | MS.gene85370:intron |
| TCCGAGAAGAAGGTTCAACC+AGG | 0.604600 | 2.1:-47339189 | MS.gene85370:CDS |
| ATATACTGAAACTGGAACTG+AGG | 0.605588 | 2.1:-47338147 | MS.gene85370:CDS |
| ACCCTTAAGCACTAGTGATG+AGG | 0.614795 | 2.1:-47340016 | MS.gene85370:CDS |
| AAAATTCAGTACCTGAAACC+AGG | 0.621327 | 2.1:+47341763 | None:intergenic |
| CTGTTGCAAGTTTCTTACCA+AGG | 0.628286 | 2.1:+47338606 | None:intergenic |
| GAGCTTCTTAACAGCCAGAG+AGG | 0.633537 | 2.1:-47340081 | MS.gene85370:CDS |
| GAAGACATGTTTCCACTTGG+GGG | 0.635876 | 2.1:-47341006 | MS.gene85370:CDS |
| GAGTATGAAATCAATGACAA+AGG | 0.637828 | 2.1:-47341497 | MS.gene85370:CDS |
| AGGCCTAACTATACCTTAGG+GGG | 0.643124 | 2.1:+47339117 | None:intergenic |
| AACAGAGATGAAAATTCTGG+AGG | 0.647018 | 2.1:-47338062 | MS.gene85370:CDS |
| CGTCACGAAGGCTAGTTATG+GGG | 0.648420 | 2.1:+47341220 | None:intergenic |
| AGGGCTCAACTCCAATTGCA+CGG | 0.653427 | 2.1:+47338540 | None:intergenic |
| CAGGCCTAACTATACCTTAG+GGG | 0.667223 | 2.1:+47339116 | None:intergenic |
| TCTGAACCAGTAACTCTCTG+CGG | 0.671016 | 2.1:+47339312 | None:intergenic |
| CCGAGAAGAAGGTTCAACCA+GGG | 0.684770 | 2.1:-47339188 | MS.gene85370:CDS |
| AAATGAATGCAGCTTCCATG+GGG | 0.709804 | 2.1:-47341526 | MS.gene85370:intron |
| TCATTGAACACAGAATCAGG+AGG | 0.760114 | 2.1:-47338658 | MS.gene85370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAACAAAGATATTAA+TGG | + | chr2.1:47341606-47341625 | None:intergenic | 10.0% |
| !!! | AATAAGTTTAAAATAGATTA+TGG | + | chr2.1:47340805-47340824 | None:intergenic | 10.0% |
| !! | ATAGATAATTTGAAGATTAT+AGG | - | chr2.1:47339014-47339033 | MS.gene85370:intron | 15.0% |
| !! | ATGTTTAATAGTTATGAATT+TGG | - | chr2.1:47339893-47339912 | MS.gene85370:intron | 15.0% |
| !! | TGATATAATTGTGTTTAATA+CGG | + | chr2.1:47339453-47339472 | None:intergenic | 15.0% |
| !! | ATACAAACAAATGTAATTGT+TGG | - | chr2.1:47339316-47339335 | MS.gene85370:CDS | 20.0% |
| !! | ATCTTCAAATTATCTATCAA+TGG | + | chr2.1:47339011-47339030 | None:intergenic | 20.0% |
| !! | ATGTACTATTGTTTGTTTAA+TGG | - | chr2.1:47340335-47340354 | MS.gene85370:intron | 20.0% |
| !! | ATTAAAATTAGAGACTTACA+AGG | + | chr2.1:47338345-47338364 | None:intergenic | 20.0% |
| !! | CATTTGTTTGTATTAACTTA+TGG | + | chr2.1:47339309-47339328 | None:intergenic | 20.0% |
| !! | TACAAACAAATGTAATTGTT+GGG | - | chr2.1:47339317-47339336 | MS.gene85370:CDS | 20.0% |
| !! | TAGGATTACCAAAATATTAT+TGG | - | chr2.1:47339047-47339066 | MS.gene85370:intron | 20.0% |
| !! | TTAATAGATTACTGATATGT+GGG | - | chr2.1:47339345-47339364 | MS.gene85370:CDS | 20.0% |
| !! | TTAGAAGTAATCTTGTAAAA+TGG | - | chr2.1:47339426-47339445 | MS.gene85370:CDS | 20.0% |
| !! | TTCTAACAGTAATTAACTTA+AGG | - | chr2.1:47339624-47339643 | MS.gene85370:intron | 20.0% |
| !!! | ATTGAACCATTTTATCAAAT+AGG | + | chr2.1:47338682-47338701 | None:intergenic | 20.0% |
| !!! | ATTGATTTTTATTATAGTGC+TGG | - | chr2.1:47338129-47338148 | MS.gene85370:CDS | 20.0% |
| !!! | CGATTTGATTTTTAAAATTC+AGG | - | chr2.1:47338609-47338628 | MS.gene85370:CDS | 20.0% |
| !!! | TATTTATGTTACTTTTGAAC+CGG | - | chr2.1:47339594-47339613 | MS.gene85370:intron | 20.0% |
| !!! | TTGAACCATTTTATCAAATA+GGG | + | chr2.1:47338681-47338700 | None:intergenic | 20.0% |
| ! | AACAAAATAGAGGATGATAT+TGG | - | chr2.1:47340586-47340605 | MS.gene85370:intron | 25.0% |
| ! | AAGAAATAAAGATCAAGAAG+AGG | - | chr2.1:47341326-47341345 | MS.gene85370:intron | 25.0% |
| ! | ACAGATTACAACATAGAATT+TGG | + | chr2.1:47338551-47338570 | None:intergenic | 25.0% |
| ! | AGAAAGTAAAGCGAAAATTA+AGG | - | chr2.1:47341242-47341261 | MS.gene85370:intron | 25.0% |
| ! | AGTATAATACAAACTTACCA+AGG | + | chr2.1:47338985-47339004 | None:intergenic | 25.0% |
| ! | ATAATTTAAGAAAGCGAAAG+TGG | + | chr2.1:47340228-47340247 | None:intergenic | 25.0% |
| ! | ATGTATAAGCTATTTGTGTA+AGG | + | chr2.1:47340888-47340907 | None:intergenic | 25.0% |
| ! | ATTATATCATGTAAACCCTA+AGG | - | chr2.1:47339464-47339483 | MS.gene85370:intron | 25.0% |
| ! | GAAAATAGAAAATGTGGATA+AGG | - | chr2.1:47341542-47341561 | MS.gene85370:intron | 25.0% |
| ! | GAACATACAATATTTGATCA+CGG | + | chr2.1:47339556-47339575 | None:intergenic | 25.0% |
| ! | GATTATAGGATATCTTGTAT+AGG | - | chr2.1:47339028-47339047 | MS.gene85370:intron | 25.0% |
| ! | GTATTACTATGTGTTGTATA+TGG | - | chr2.1:47341564-47341583 | MS.gene85370:intron | 25.0% |
| ! | GTTAATAGATTACTGATATG+TGG | - | chr2.1:47339344-47339363 | MS.gene85370:CDS | 25.0% |
| ! | GTTTGTTCGGTATATTTATA+GGG | + | chr2.1:47341290-47341309 | None:intergenic | 25.0% |
| ! | TAACACCCTATTTGATAAAA+TGG | - | chr2.1:47338673-47338692 | MS.gene85370:CDS | 25.0% |
| ! | TCAAAAAGAAAATCAACATG+TGG | + | chr2.1:47338100-47338119 | None:intergenic | 25.0% |
| ! | TCAAATAAATCAATCCAAAC+AGG | + | chr2.1:47340714-47340733 | None:intergenic | 25.0% |
| ! | TCTGATACAAAACAAAATAG+AGG | - | chr2.1:47340576-47340595 | MS.gene85370:intron | 25.0% |
| ! | TGTTTGTTCGGTATATTTAT+AGG | + | chr2.1:47341291-47341310 | None:intergenic | 25.0% |
| ! | TTAAAATTCAGGATTCTGAA+GGG | - | chr2.1:47338620-47338639 | MS.gene85370:CDS | 25.0% |
| ! | TTACTTTCTTCAATATGTAC+TGG | + | chr2.1:47341231-47341250 | None:intergenic | 25.0% |
| ! | TTTGAATCTGTTTGTTTGTT+CGG | + | chr2.1:47341303-47341322 | None:intergenic | 25.0% |
| !! | AGAGCTAACCAATAATATTT+TGG | + | chr2.1:47339058-47339077 | None:intergenic | 25.0% |
| !! | GAAGAATCTTTCTTTTCATT+TGG | + | chr2.1:47341102-47341121 | None:intergenic | 25.0% |
| !! | TATCCACATTTTCTATTTTC+CGG | + | chr2.1:47341542-47341561 | None:intergenic | 25.0% |
| !! | TTTAAAATTCAGGATTCTGA+AGG | - | chr2.1:47338619-47338638 | MS.gene85370:CDS | 25.0% |
| !!! | ATATTATTGGTTAGCTCTAT+AGG | - | chr2.1:47339060-47339079 | MS.gene85370:intron | 25.0% |
| !!! | GAATTCACTTTTTGAAAAAC+TGG | + | chr2.1:47341023-47341042 | None:intergenic | 25.0% |
| !!! | TTAAGGTTGATATTACAGAA+AGG | - | chr2.1:47338772-47338791 | MS.gene85370:intron | 25.0% |
| AATGTACCATATACTGAAAC+TGG | - | chr2.1:47341653-47341672 | MS.gene85370:CDS | 30.0% | |
| ACAAATGTAATTGTTGGGTT+TGG | - | chr2.1:47339322-47339341 | MS.gene85370:CDS | 30.0% | |
| AGAAATACTCTTAACCATCT+AGG | - | chr2.1:47341474-47341493 | MS.gene85370:intron | 30.0% | |
| AGAACATTGCAGATCAATAT+AGG | - | chr2.1:47340374-47340393 | MS.gene85370:intron | 30.0% | |
| AGCTCTATAGGATAATAAGT+AGG | - | chr2.1:47339072-47339091 | MS.gene85370:intron | 30.0% | |
| ATCAAAGAAGTTTGGATTTC+CGG | - | chr2.1:47341520-47341539 | MS.gene85370:intron | 30.0% | |
| CAAAAAGTGAATTCTTACAC+AGG | - | chr2.1:47341029-47341048 | MS.gene85370:CDS | 30.0% | |
| CCACTTAAAAAGTTGACAAT+AGG | + | chr2.1:47338244-47338263 | None:intergenic | 30.0% | |
| CTTACTTGATACTTTATTGG+AGG | + | chr2.1:47341078-47341097 | None:intergenic | 30.0% | |
| CTTTCTATTGATCAACCTTA+GGG | + | chr2.1:47339482-47339501 | None:intergenic | 30.0% | |
| GAACATTGCAGATCAATATA+GGG | - | chr2.1:47340375-47340394 | MS.gene85370:intron | 30.0% | |
| GAGTATGAAATCAATGACAA+AGG | - | chr2.1:47338311-47338330 | MS.gene85370:CDS | 30.0% | |
| GATAACAGAGATGAAAATTC+TGG | - | chr2.1:47341743-47341762 | MS.gene85370:intron | 30.0% | |
| GCTTAAACAATGCAAACTAA+AGG | - | chr2.1:47338959-47338978 | MS.gene85370:intron | 30.0% | |
| GGACTTACTTGATACTTTAT+TGG | + | chr2.1:47341081-47341100 | None:intergenic | 30.0% | |
| TAAAAATCAAATCGTCACGA+AGG | + | chr2.1:47338603-47338622 | None:intergenic | 30.0% | |
| TACTTCTAAATCATACTGCT+GGG | + | chr2.1:47339415-47339434 | None:intergenic | 30.0% | |
| TGACACTGACACATAAATAT+TGG | - | chr2.1:47338420-47338439 | MS.gene85370:CDS | 30.0% | |
| TTACTTCTAAATCATACTGC+TGG | + | chr2.1:47339416-47339435 | None:intergenic | 30.0% | |
| TTCTTCATCAACATCCATAA+GGG | - | chr2.1:47338171-47338190 | MS.gene85370:intron | 30.0% | |
| TTTCCGGAAAATAGAAAATG+TGG | - | chr2.1:47341536-47341555 | MS.gene85370:intron | 30.0% | |
| TTTCTTCATCAACATCCATA+AGG | - | chr2.1:47338170-47338189 | MS.gene85370:intron | 30.0% | |
| ! | AAGTGGCTATTGTAACATTT+TGG | - | chr2.1:47338258-47338277 | MS.gene85370:intron | 30.0% |
| ! | AGTTGACAATAGGTTGAATA+AGG | + | chr2.1:47338234-47338253 | None:intergenic | 30.0% |
| ! | ATCATTTTCCTAACATTGCT+AGG | + | chr2.1:47340652-47340671 | None:intergenic | 30.0% |
| ! | ATGGATGTTGATGAAGAAAA+TGG | + | chr2.1:47338169-47338188 | None:intergenic | 30.0% |
| ! | ATTTTCCAATGTCTTCTTGT+TGG | + | chr2.1:47340317-47340336 | None:intergenic | 30.0% |
| ! | TATTATAGTGCTGGAATTCA+TGG | - | chr2.1:47338138-47338157 | MS.gene85370:CDS | 30.0% |
| ! | TTGATGATAACCTGATCAAA+TGG | + | chr2.1:47341773-47341792 | None:intergenic | 30.0% |
| ! | TTTGAAACAGTTACAGTTTC+AGG | - | chr2.1:47341426-47341445 | MS.gene85370:intron | 30.0% |
| !! | CCTATTGTCAACTTTTTAAG+TGG | - | chr2.1:47338241-47338260 | MS.gene85370:intron | 30.0% |
| !! | GATATTACAGAAAGGTGTTT+GGG | - | chr2.1:47338780-47338799 | MS.gene85370:intron | 30.0% |
| !! | TGATATTACAGAAAGGTGTT+TGG | - | chr2.1:47338779-47338798 | MS.gene85370:intron | 30.0% |
| AAAATTCAGTACCTGAAACC+AGG | + | chr2.1:47338048-47338067 | None:intergenic | 35.0% | |
| AAAGCGAAAGTGGATGATAT+CGG | + | chr2.1:47340218-47340237 | None:intergenic | 35.0% | |
| AACAGAGATGAAAATTCTGG+AGG | - | chr2.1:47341746-47341765 | MS.gene85370:intron | 35.0% | |
| AACGTGATGCAGTAAATATC+TGG | - | chr2.1:47338738-47338757 | MS.gene85370:CDS | 35.0% | |
| ACTTGATACTTTATTGGAGG+TGG | + | chr2.1:47341075-47341094 | None:intergenic | 35.0% | |
| AGAATTTGGTACGACTTATC+TGG | + | chr2.1:47338537-47338556 | None:intergenic | 35.0% | |
| AGCAAATAGTAGAGATCAAG+AGG | - | chr2.1:47341365-47341384 | MS.gene85370:intron | 35.0% | |
| ATATACTGAAACTGGAACTG+AGG | - | chr2.1:47341661-47341680 | MS.gene85370:CDS | 35.0% | |
| ATATTAACTGCTTGTGACAC+AGG | + | chr2.1:47340418-47340437 | None:intergenic | 35.0% | |
| ATCATACTGTACATGCACAA+GGG | + | chr2.1:47340987-47341006 | None:intergenic | 35.0% | |
| ATTGAAAAATGAGGGGCTAA+AGG | - | chr2.1:47339173-47339192 | MS.gene85370:CDS | 35.0% | |
| CAATATTTGATCACGGAGTT+CGG | + | chr2.1:47339549-47339568 | None:intergenic | 35.0% | |
| CCTTTCTATTGATCAACCTT+AGG | + | chr2.1:47339483-47339502 | None:intergenic | 35.0% | |
| GAAACAGCTAAACTCAGTTA+AGG | - | chr2.1:47340094-47340113 | MS.gene85370:CDS | 35.0% | |
| GAATTCTTACACAGGATATG+AGG | - | chr2.1:47341037-47341056 | MS.gene85370:CDS | 35.0% | |
| GATTTCGTATTTGAGCTAGA+AGG | + | chr2.1:47339236-47339255 | None:intergenic | 35.0% | |
| GGAAATCCAAACTTCTTTGA+TGG | + | chr2.1:47341521-47341540 | None:intergenic | 35.0% | |
| GGAGAGATCATTAAAAGTTG+TGG | - | chr2.1:47339645-47339664 | MS.gene85370:intron | 35.0% | |
| TAAATGAATGCAGCTTCCAT+GGG | - | chr2.1:47338281-47338300 | MS.gene85370:CDS | 35.0% | |
| TAAGCACAAGTAAGGATGTT+TGG | - | chr2.1:47340749-47340768 | MS.gene85370:intron | 35.0% | |
| TACTGACATAAGCACAAGTA+AGG | - | chr2.1:47340741-47340760 | MS.gene85370:intron | 35.0% | |
| TCAGTTCCAGTTTCAGTATA+TGG | + | chr2.1:47341662-47341681 | None:intergenic | 35.0% | |
| TCATACCAACAAGAAGACAT+TGG | - | chr2.1:47340309-47340328 | MS.gene85370:intron | 35.0% | |
| TCTTCAATATTCCGAGAAGA+AGG | - | chr2.1:47340609-47340628 | MS.gene85370:intron | 35.0% | |
| TCTTCATCAACATCCATAAG+GGG | - | chr2.1:47338172-47338191 | MS.gene85370:intron | 35.0% | |
| TGTGGAACTTTCTTTGTCAT+CGG | + | chr2.1:47340045-47340064 | None:intergenic | 35.0% | |
| TTACTGTTAGAACAGAAAGC+CGG | + | chr2.1:47339616-47339635 | None:intergenic | 35.0% | |
| TTCACATAAGCTAGCTATCA+TGG | + | chr2.1:47340840-47340859 | None:intergenic | 35.0% | |
| TTCCACAACAAATGTTGTTG+AGG | - | chr2.1:47340058-47340077 | MS.gene85370:CDS | 35.0% | |
| TTGAAAAATGAGGGGCTAAA+GGG | - | chr2.1:47339174-47339193 | MS.gene85370:CDS | 35.0% | |
| TTTCTCAGATGATGACTCAT+TGG | + | chr2.1:47340473-47340492 | None:intergenic | 35.0% | |
| ! | ATGTCTTCTATCAGAAGTGT+CGG | - | chr2.1:47338509-47338528 | MS.gene85370:CDS | 35.0% |
| ! | CCTAAGGTTGATCAATAGAA+AGG | - | chr2.1:47339480-47339499 | MS.gene85370:intron | 35.0% |
| ! | GTTATCATCAGTAGAAGTAC+TGG | + | chr2.1:47341729-47341748 | None:intergenic | 35.0% |
| ! | TCTTGTTGAAGATGTTGCTT+TGG | + | chr2.1:47339987-47340006 | None:intergenic | 35.0% |
| ! | TTCTTCTGAGAGTCAACATT+TGG | - | chr2.1:47341116-47341135 | MS.gene85370:intron | 35.0% |
| !! | AGTTTAGCTGTTTCTGTTCA+AGG | + | chr2.1:47340088-47340107 | None:intergenic | 35.0% |
| !! | TTAGCCCCTCATTTTTCAAT+GGG | + | chr2.1:47339173-47339192 | None:intergenic | 35.0% |
| !! | TTTAGCCCCTCATTTTTCAA+TGG | + | chr2.1:47339174-47339193 | None:intergenic | 35.0% |
| AAATGAATGCAGCTTCCATG+GGG | - | chr2.1:47338282-47338301 | MS.gene85370:CDS | 40.0% | |
| AACAGGCCTAACTATACCTT+AGG | + | chr2.1:47340697-47340716 | None:intergenic | 40.0% | |
| AAGGTATAGTTAGGCCTGTT+TGG | - | chr2.1:47340697-47340716 | MS.gene85370:intron | 40.0% | |
| AATTAAGGACACCGTGCAAT+TGG | - | chr2.1:47341257-47341276 | MS.gene85370:intron | 40.0% | |
| ACAATGCAAACTAAAGGCCT+TGG | - | chr2.1:47338965-47338984 | MS.gene85370:intron | 40.0% | |
| ACAGGCCTAACTATACCTTA+GGG | + | chr2.1:47340696-47340715 | None:intergenic | 40.0% | |
| ACCTCATCACTAGTGCTTAA+GGG | + | chr2.1:47339796-47339815 | None:intergenic | 40.0% | |
| AGGAGGCTTCTTACAAGATA+GGG | - | chr2.1:47341167-47341186 | MS.gene85370:intron | 40.0% | |
| AGTCAATAGCATACCCCTTA+TGG | + | chr2.1:47338188-47338207 | None:intergenic | 40.0% | |
| AGTTTCAGGAAACATGCCTT+TGG | - | chr2.1:47341440-47341459 | MS.gene85370:intron | 40.0% | |
| ATACCTCTCTAACTGTAGAG+CGG | + | chr2.1:47339514-47339533 | None:intergenic | 40.0% | |
| CCAACAATACCTCAGAAAAG+CGG | + | chr2.1:47339133-47339152 | None:intergenic | 40.0% | |
| CGTATTTGAGCTAGAAGGAA+AGG | + | chr2.1:47339231-47339250 | None:intergenic | 40.0% | |
| CTCAAGCCATCAAAGAAGTT+TGG | - | chr2.1:47341512-47341531 | MS.gene85370:CDS | 40.0% | |
| CTGTTGCAAGTTTCTTACCA+AGG | + | chr2.1:47341205-47341224 | None:intergenic | 40.0% | |
| CTTGGTAAGAAACTTGCAAC+AGG | - | chr2.1:47341203-47341222 | MS.gene85370:CDS | 40.0% | |
| GATCATACTGTACATGCACA+AGG | + | chr2.1:47340988-47341007 | None:intergenic | 40.0% | |
| GGTGATGATTCTTGAGAAGA+TGG | + | chr2.1:47339966-47339985 | None:intergenic | 40.0% | |
| GTAAATGAATGCAGCTTCCA+TGG | - | chr2.1:47338280-47338299 | MS.gene85370:CDS | 40.0% | |
| GTCTTACATCAATCCGACAT+TGG | + | chr2.1:47338489-47338508 | None:intergenic | 40.0% | |
| TAGCTATCATGGAGAGCTTA+TGG | + | chr2.1:47340829-47340848 | None:intergenic | 40.0% | |
| TCATTGAACACAGAATCAGG+AGG | - | chr2.1:47341150-47341169 | MS.gene85370:intron | 40.0% | |
| TCCCACATACATTTCCTCAA+AGG | - | chr2.1:47339916-47339935 | MS.gene85370:intron | 40.0% | |
| TGAGCCCCATTGAAAAATGA+GGG | - | chr2.1:47339165-47339184 | MS.gene85370:CDS | 40.0% | |
| TGAGGTGAGCAAGTATGAAA+AGG | - | chr2.1:47341679-47341698 | MS.gene85370:intron | 40.0% | |
| TGATGCAGTAAATATCTGGC+AGG | - | chr2.1:47338742-47338761 | MS.gene85370:CDS | 40.0% | |
| TGTCACAAATGAGCCAATGT+CGG | - | chr2.1:47338473-47338492 | MS.gene85370:CDS | 40.0% | |
| TTTCTATCAGAGAGCTCCAA+AGG | + | chr2.1:47341459-47341478 | None:intergenic | 40.0% | |
| ! | AACCAACAGGACTTGGTAAT+TGG | + | chr2.1:47340019-47340038 | None:intergenic | 40.0% |
| ! | ACCAACAGGACTTGGTAATT+GGG | + | chr2.1:47340018-47340037 | None:intergenic | 40.0% |
| ! | ACTTTTTATCGTGGCCTAGA+TGG | + | chr2.1:47341491-47341510 | None:intergenic | 40.0% |
| ! | AGCCTTTGAGGAAATGTATG+TGG | + | chr2.1:47339921-47339940 | None:intergenic | 40.0% |
| ! | AGGATGTTTGGAACAGATCA+TGG | - | chr2.1:47340761-47340780 | MS.gene85370:intron | 40.0% |
| ! | ATCTGGCAGGAGTACATTTA+AGG | - | chr2.1:47338755-47338774 | MS.gene85370:CDS | 40.0% |
| ! | CACAACAATTGGGCATTGTT+TGG | + | chr2.1:47340964-47340983 | None:intergenic | 40.0% |
| ! | CTCTACAGTTAGAGAGGTAT+AGG | - | chr2.1:47339514-47339533 | MS.gene85370:intron | 40.0% |
| ! | GATGGAGCACTTAAAACATC+AGG | + | chr2.1:47339948-47339967 | None:intergenic | 40.0% |
| ! | GCCTTTGAGGAAATGTATGT+GGG | + | chr2.1:47339920-47339939 | None:intergenic | 40.0% |
| ! | TAGAGAGGTATAGGCAGAAT+TGG | - | chr2.1:47339523-47339542 | MS.gene85370:intron | 40.0% |
| ! | TTCATACTCCATTTTCCCCA+TGG | + | chr2.1:47338300-47338319 | None:intergenic | 40.0% |
| !! | AACCTATGTAGCATTGACAC+CGG | - | chr2.1:47338388-47338407 | MS.gene85370:CDS | 40.0% |
| !! | GGCTTGAGTACTTTTTATCG+TGG | + | chr2.1:47341500-47341519 | None:intergenic | 40.0% |
| !! | TAGCCCCTCATTTTTCAATG+GGG | + | chr2.1:47339172-47339191 | None:intergenic | 40.0% |
| !! | TCTATGTAGCACTGACACTT+CGG | - | chr2.1:47340142-47340161 | MS.gene85370:intron | 40.0% |
| !!! | TGACACAGGTTTTGTTGATG+AGG | + | chr2.1:47340404-47340423 | None:intergenic | 40.0% |
| !!! | TTTTGAAAGTGTTCCCCCTA+AGG | - | chr2.1:47340678-47340697 | MS.gene85370:intron | 40.0% |
| AAACAACCGCAGAGAGTTAC+TGG | - | chr2.1:47340490-47340509 | MS.gene85370:intron | 45.0% | |
| AAACCGCTCTACAGTTAGAG+AGG | - | chr2.1:47339508-47339527 | MS.gene85370:intron | 45.0% | |
| ACATCAGGAGAAAGCCTTTG+AGG | + | chr2.1:47339933-47339952 | None:intergenic | 45.0% | |
| ACCCTTAAGCACTAGTGATG+AGG | - | chr2.1:47339792-47339811 | MS.gene85370:CDS | 45.0% | |
| AGACCTATGAAGCACAAGCA+CGG | + | chr2.1:47340285-47340304 | None:intergenic | 45.0% | |
| AGGCCTAACTATACCTTAGG+GGG | + | chr2.1:47340694-47340713 | None:intergenic | 45.0% | |
| CACCTCATCACTAGTGCTTA+AGG | + | chr2.1:47339797-47339816 | None:intergenic | 45.0% | |
| CAGGAGGCTTCTTACAAGAT+AGG | - | chr2.1:47341166-47341185 | MS.gene85370:intron | 45.0% | |
| CAGGCCTAACTATACCTTAG+GGG | + | chr2.1:47340695-47340714 | None:intergenic | 45.0% | |
| CCTACATGTTACTGTGTGTC+CGG | - | chr2.1:47340256-47340275 | MS.gene85370:intron | 45.0% | |
| CGGTCATTGAACACAGAATC+AGG | - | chr2.1:47341147-47341166 | MS.gene85370:intron | 45.0% | |
| GAAGACATGTTTCCACTTGG+GGG | - | chr2.1:47338802-47338821 | MS.gene85370:intron | 45.0% | |
| GAGCCCCATTGAAAAATGAG+GGG | - | chr2.1:47339166-47339185 | MS.gene85370:CDS | 45.0% | |
| GCGTGACAGAATTCGTATGA+TGG | - | chr2.1:47338870-47338889 | MS.gene85370:intron | 45.0% | |
| GGAAGACATGTTTCCACTTG+GGG | - | chr2.1:47338801-47338820 | MS.gene85370:intron | 45.0% | |
| GGAGAACTCCTAGCAATGTT+AGG | - | chr2.1:47340641-47340660 | MS.gene85370:intron | 45.0% | |
| GGGAAGACATGTTTCCACTT+GGG | - | chr2.1:47338800-47338819 | MS.gene85370:intron | 45.0% | |
| GTGAGCCCCATTGAAAAATG+AGG | - | chr2.1:47339164-47339183 | MS.gene85370:CDS | 45.0% | |
| GTTCCCCCTAAGGTATAGTT+AGG | - | chr2.1:47340688-47340707 | MS.gene85370:intron | 45.0% | |
| TATGTGTCAGTGTCAGTGTC+AGG | + | chr2.1:47338415-47338434 | None:intergenic | 45.0% | |
| TCAGATGATGACTCATTGGC+AGG | + | chr2.1:47340469-47340488 | None:intergenic | 45.0% | |
| TCCCAATTACCAAGTCCTGT+TGG | - | chr2.1:47340014-47340033 | MS.gene85370:CDS | 45.0% | |
| TCTGAACCAGTAACTCTCTG+CGG | + | chr2.1:47340499-47340518 | None:intergenic | 45.0% | |
| TGGGAAGACATGTTTCCACT+TGG | - | chr2.1:47338799-47338818 | MS.gene85370:intron | 45.0% | |
| TTGTCATCGGAGAAACCAAC+AGG | + | chr2.1:47340032-47340051 | None:intergenic | 45.0% | |
| ! | ATCGTCACGAAGGCTAGTTA+TGG | + | chr2.1:47338593-47338612 | None:intergenic | 45.0% |
| ! | ATGCACAAGGGCACAACAAT+TGG | + | chr2.1:47340975-47340994 | None:intergenic | 45.0% |
| ! | CGCCTCAACAACATTTGTTG+TGG | + | chr2.1:47340063-47340082 | None:intergenic | 45.0% |
| ! | GAGCAAGTATGAAAAGGTGC+AGG | - | chr2.1:47341685-47341704 | MS.gene85370:intron | 45.0% |
| ! | GCACTGACACTTCGGATTAA+AGG | - | chr2.1:47340150-47340169 | MS.gene85370:intron | 45.0% |
| ! | GTCAACATTTGGAGCAGGAT+CGG | - | chr2.1:47341127-47341146 | MS.gene85370:intron | 45.0% |
| ! | TCGTCACGAAGGCTAGTTAT+GGG | + | chr2.1:47338592-47338611 | None:intergenic | 45.0% |
| ! | TGAGAGTCAACATTTGGAGC+AGG | - | chr2.1:47341122-47341141 | MS.gene85370:intron | 45.0% |
| ! | TGCACAAGGGCACAACAATT+GGG | + | chr2.1:47340974-47340993 | None:intergenic | 45.0% |
| ! | TTCTGGAGGACCATTTGATC+AGG | - | chr2.1:47341760-47341779 | MS.gene85370:intron | 45.0% |
| !! | TAGGGTGAAAAGTGCTTCCT+TGG | - | chr2.1:47341185-47341204 | MS.gene85370:CDS | 45.0% |
| !!! | CCGCTTTTCTGAGGTATTGT+TGG | - | chr2.1:47339130-47339149 | MS.gene85370:intron | 45.0% |
| !!! | ATTAAAATTAATTTTTGATT+TGG | - | chr2.1:47339671-47339690 | MS.gene85370:intron | 5.0% |
| ACATTGCTAGGAGTTCTCCC+TGG | + | chr2.1:47340640-47340659 | None:intergenic | 50.0% | |
| AGGGCTCAACTCCAATTGCA+CGG | + | chr2.1:47341271-47341290 | None:intergenic | 50.0% | |
| CCAGGAACAATCCTGGTTTC+AGG | - | chr2.1:47338034-47338053 | MS.gene85370:CDS | 50.0% | |
| CCCTGGTTGAACCTTCTTCT+CGG | + | chr2.1:47340623-47340642 | None:intergenic | 50.0% | |
| CCGAGAAGAAGGTTCAACCA+GGG | - | chr2.1:47340620-47340639 | MS.gene85370:intron | 50.0% | |
| CCGGACACACAGTAACATGT+AGG | + | chr2.1:47340259-47340278 | None:intergenic | 50.0% | |
| CCTGAAACCAGGATTGTTCC+TGG | + | chr2.1:47338037-47338056 | None:intergenic | 50.0% | |
| CGGTGCAACGTACTTGAGAT+TGG | + | chr2.1:47339113-47339132 | None:intergenic | 50.0% | |
| GAGCTTCTTAACAGCCAGAG+AGG | - | chr2.1:47339727-47339746 | MS.gene85370:CDS | 50.0% | |
| GGGAATGAAATATCGCGTGC+AGG | - | chr2.1:47338640-47338659 | MS.gene85370:CDS | 50.0% | |
| TCCGAGAAGAAGGTTCAACC+AGG | - | chr2.1:47340619-47340638 | MS.gene85370:intron | 50.0% | |
| TCGGAGAAACCAACAGGACT+TGG | + | chr2.1:47340026-47340045 | None:intergenic | 50.0% | |
| TGCAGCTTCCATGGGGAAAA+TGG | - | chr2.1:47338289-47338308 | MS.gene85370:CDS | 50.0% | |
| TGTCCGTGCTTGTGCTTCAT+AGG | - | chr2.1:47340279-47340298 | MS.gene85370:intron | 50.0% | |
| ! | AGCACTAGTGATGAGGTGTC+AGG | - | chr2.1:47339799-47339818 | MS.gene85370:CDS | 50.0% |
| ! | CGTCACGAAGGCTAGTTATG+GGG | + | chr2.1:47338591-47338610 | None:intergenic | 50.0% |
| ! | GTCCGGTGTCAATGCTACAT+AGG | + | chr2.1:47338393-47338412 | None:intergenic | 50.0% |
| ! | TCAACTCTCGTGTCTGGCTT+AGG | - | chr2.1:47339201-47339220 | MS.gene85370:CDS | 50.0% |
| !! | TACGTTGCACCGCTTTTCTG+AGG | - | chr2.1:47339121-47339140 | MS.gene85370:intron | 50.0% |
| !! | TGTCACTTTCTGCACCTCTC+TGG | + | chr2.1:47339744-47339763 | None:intergenic | 50.0% |
| GACATGTTTCCACTTGGGGG+AGG | - | chr2.1:47338805-47338824 | MS.gene85370:intron | 55.0% | |
| GGCTTGTCAACTCTCGTGTC+TGG | - | chr2.1:47339195-47339214 | MS.gene85370:CDS | 55.0% | |
| GTCAGTGTCAGTGTCAGGTC+CGG | + | chr2.1:47338410-47338429 | None:intergenic | 55.0% | |
| TGAAGCACAAGCACGGACAC+CGG | + | chr2.1:47340278-47340297 | None:intergenic | 55.0% | |
| TGCAACTGTCCTCCCCCAAG+TGG | + | chr2.1:47338817-47338836 | None:intergenic | 60.0% | |
| ! | ATGTGGGCAGCTTGCTCGAG+CGG | - | chr2.1:47339361-47339380 | MS.gene85370:CDS | 60.0% |
| ! | TGTGGGCAGCTTGCTCGAGC+GGG | - | chr2.1:47339362-47339381 | MS.gene85370:CDS | 65.0% |
| AGCGGGACCGTGACTGGGGT+GGG | - | chr2.1:47339379-47339398 | MS.gene85370:CDS | 70.0% | |
| CTCGAGCGGGACCGTGACTG+GGG | - | chr2.1:47339375-47339394 | MS.gene85370:CDS | 70.0% | |
| GCTCGAGCGGGACCGTGACT+GGG | - | chr2.1:47339374-47339393 | MS.gene85370:CDS | 70.0% | |
| TGCTCGAGCGGGACCGTGAC+TGG | - | chr2.1:47339373-47339392 | MS.gene85370:CDS | 70.0% | |
| TTGCCCCCCCACCCCAGTCA+CGG | + | chr2.1:47339389-47339408 | None:intergenic | 70.0% | |
| CGGGACCGTGACTGGGGTGG+GGG | - | chr2.1:47339381-47339400 | MS.gene85370:CDS | 75.0% | |
| GAGCGGGACCGTGACTGGGG+TGG | - | chr2.1:47339378-47339397 | MS.gene85370:CDS | 75.0% | |
| GCGGGACCGTGACTGGGGTG+GGG | - | chr2.1:47339380-47339399 | MS.gene85370:CDS | 75.0% | |
| GGACCGTGACTGGGGTGGGG+GGG | - | chr2.1:47339383-47339402 | MS.gene85370:CDS | 75.0% | |
| GGGACCGTGACTGGGGTGGG+GGG | - | chr2.1:47339382-47339401 | MS.gene85370:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 47338031 | 47341799 | 47338031 | ID=MS.gene85370 |
| chr2.1 | mRNA | 47338031 | 47341799 | 47338031 | ID=MS.gene85370.t1;Parent=MS.gene85370 |
| chr2.1 | exon | 47341775 | 47341799 | 47341775 | ID=MS.gene85370.t1.exon1;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47341775 | 47341799 | 47341775 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47341637 | 47341684 | 47341637 | ID=MS.gene85370.t1.exon2;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47341637 | 47341684 | 47341637 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47341485 | 47341536 | 47341485 | ID=MS.gene85370.t1.exon3;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47341485 | 47341536 | 47341485 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47341169 | 47341242 | 47341169 | ID=MS.gene85370.t1.exon4;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47341169 | 47341242 | 47341169 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47340939 | 47341066 | 47340939 | ID=MS.gene85370.t1.exon5;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47340939 | 47341066 | 47340939 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47340010 | 47340133 | 47340010 | ID=MS.gene85370.t1.exon6;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47340010 | 47340133 | 47340010 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47339721 | 47339854 | 47339721 | ID=MS.gene85370.t1.exon7;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47339721 | 47339854 | 47339721 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47339131 | 47339454 | 47339131 | ID=MS.gene85370.t1.exon8;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47339131 | 47339454 | 47339131 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47338267 | 47338779 | 47338267 | ID=MS.gene85370.t1.exon9;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47338267 | 47338779 | 47338267 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| chr2.1 | exon | 47338031 | 47338177 | 47338031 | ID=MS.gene85370.t1.exon10;Parent=MS.gene85370.t1 |
| chr2.1 | CDS | 47338031 | 47338177 | 47338031 | ID=cds.MS.gene85370.t1;Parent=MS.gene85370.t1 |
| Gene Sequence |
| Protein sequence |
