Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88242.t1 | XP_003606145.2 | 96.1 | 361 | 12 | 1 | 1 | 359 | 1 | 361 | 2.40E-202 | 714.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88242.t1 | G7JIH3 | 96.1 | 361 | 12 | 1 | 1 | 359 | 1 | 361 | 1.7e-202 | 714.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene88242 | 0.825089 | 5.67E-54 | -1.69E-46 |
| MS.gene04918 | MS.gene88242 | 0.834569 | 2.78E-56 | -1.69E-46 |
| MS.gene04920 | MS.gene88242 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene049350 | MS.gene88242 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene88242 | 0.830609 | 2.67E-55 | -1.69E-46 |
| MS.gene049983 | MS.gene88242 | 0.81928 | 1.26E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene88242 | 0.801449 | 8.96E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene88242 | 0.80433 | 2.27E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene88242 | 0.806325 | 8.69E-50 | -1.69E-46 |
| MS.gene050955 | MS.gene88242 | 0.802269 | 6.08E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene88242 | 0.841721 | 4.00E-58 | -1.69E-46 |
| MS.gene051234 | MS.gene88242 | 0.820976 | 5.16E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene88242 | 0.802284 | 6.04E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene88242 | 0.83228 | 1.03E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene88242 | 0.804993 | 1.65E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene88242 | 0.83015 | 3.45E-55 | -1.69E-46 |
| MS.gene054142 | MS.gene88242 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene054403 | MS.gene88242 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene88242 | 0.823867 | 1.10E-53 | -1.69E-46 |
| MS.gene05469 | MS.gene88242 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene05517 | MS.gene88242 | 0.803339 | 3.65E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene88242 | 0.811059 | 8.46E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene88242 | 0.831086 | 2.04E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene88242 | 0.827758 | 1.31E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene88242 | 0.817684 | 2.90E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene88242 | 0.850042 | 2.19E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene88242 | 0.802043 | 6.77E-49 | -1.69E-46 |
| MS.gene057890 | MS.gene88242 | -0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene058783 | MS.gene88242 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene88242 | 0.82883 | 7.23E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene88242 | 0.806957 | 6.39E-50 | -1.69E-46 |
| MS.gene059227 | MS.gene88242 | 0.81155 | 6.62E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene88242 | -0.826503 | 2.62E-54 | -1.69E-46 |
| MS.gene06011 | MS.gene88242 | 0.818014 | 2.45E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene88242 | 0.816548 | 5.23E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene88242 | 0.83715 | 6.16E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene88242 | 0.83471 | 2.56E-56 | -1.69E-46 |
| MS.gene061100 | MS.gene88242 | 0.834477 | 2.93E-56 | -1.69E-46 |
| MS.gene061188 | MS.gene88242 | 0.819192 | 1.32E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88242.t1 | MTR_4g053620 | 96.122 | 361 | 12 | 1 | 1 | 359 | 1 | 361 | 0.0 | 710 |
| MS.gene88242.t1 | MTR_2g086300 | 73.451 | 339 | 84 | 3 | 19 | 357 | 28 | 360 | 0.0 | 520 |
| MS.gene88242.t1 | MTR_3g104770 | 65.595 | 311 | 103 | 3 | 33 | 342 | 120 | 427 | 1.10e-150 | 431 |
| MS.gene88242.t1 | MTR_2g086290 | 47.826 | 345 | 169 | 5 | 1 | 342 | 1 | 337 | 1.19e-118 | 347 |
| MS.gene88242.t1 | MTR_1g060150 | 45.376 | 346 | 179 | 4 | 1 | 341 | 33 | 373 | 2.43e-103 | 309 |
| MS.gene88242.t1 | MTR_1g060130 | 45.533 | 347 | 177 | 5 | 1 | 341 | 33 | 373 | 6.89e-103 | 308 |
| MS.gene88242.t1 | MTR_1g050458 | 42.735 | 351 | 182 | 6 | 1 | 342 | 1 | 341 | 7.34e-96 | 289 |
| MS.gene88242.t1 | MTR_1g050458 | 40.346 | 347 | 167 | 5 | 1 | 342 | 1 | 312 | 1.75e-84 | 259 |
| MS.gene88242.t1 | MTR_4g060900 | 32.622 | 328 | 165 | 10 | 43 | 329 | 122 | 434 | 4.63e-43 | 156 |
| MS.gene88242.t1 | MTR_7g100780 | 29.375 | 320 | 182 | 10 | 42 | 325 | 153 | 464 | 2.20e-34 | 132 |
| MS.gene88242.t1 | MTR_2g086330 | 63.235 | 68 | 24 | 1 | 274 | 341 | 1 | 67 | 2.11e-24 | 95.1 |
| MS.gene88242.t1 | MTR_2g086310 | 41.000 | 100 | 48 | 4 | 16 | 113 | 100 | 190 | 3.72e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88242.t1 | AT3G44510 | 61.538 | 312 | 117 | 1 | 45 | 353 | 8 | 319 | 5.37e-147 | 418 |
| MS.gene88242.t1 | AT1G08310 | 60.197 | 304 | 116 | 2 | 43 | 345 | 8 | 307 | 1.59e-134 | 386 |
| MS.gene88242.t1 | AT1G08310 | 59.935 | 307 | 115 | 3 | 43 | 345 | 8 | 310 | 4.57e-133 | 383 |
| MS.gene88242.t1 | AT5G22460 | 44.477 | 344 | 184 | 3 | 1 | 342 | 1 | 339 | 4.16e-107 | 317 |
| MS.gene88242.t1 | AT5G22460 | 44.477 | 344 | 184 | 3 | 1 | 342 | 1 | 339 | 4.16e-107 | 317 |
| MS.gene88242.t1 | AT5G22460 | 44.477 | 344 | 184 | 3 | 1 | 342 | 1 | 339 | 4.16e-107 | 317 |
| MS.gene88242.t1 | AT3G48410 | 45.658 | 357 | 180 | 7 | 6 | 356 | 37 | 385 | 1.76e-102 | 307 |
| MS.gene88242.t1 | AT3G48410 | 45.658 | 357 | 180 | 7 | 6 | 356 | 79 | 427 | 4.20e-102 | 308 |
| MS.gene88242.t1 | AT3G03230 | 48.039 | 306 | 151 | 4 | 37 | 339 | 29 | 329 | 5.56e-101 | 301 |
| MS.gene88242.t1 | AT2G36290 | 43.840 | 349 | 186 | 5 | 1 | 344 | 17 | 360 | 6.58e-98 | 295 |
| MS.gene88242.t1 | AT2G36290 | 43.840 | 349 | 186 | 5 | 1 | 344 | 3 | 346 | 6.96e-98 | 294 |
| MS.gene88242.t1 | AT3G03240 | 46.732 | 306 | 156 | 4 | 37 | 339 | 29 | 330 | 2.25e-96 | 290 |
| MS.gene88242.t1 | AT3G44510 | 62.871 | 202 | 75 | 0 | 45 | 246 | 8 | 209 | 2.79e-96 | 286 |
| MS.gene88242.t1 | AT1G74300 | 42.042 | 333 | 184 | 5 | 14 | 341 | 16 | 344 | 2.73e-91 | 277 |
| MS.gene88242.t1 | AT3G44510 | 58.216 | 213 | 86 | 1 | 144 | 353 | 1 | 213 | 1.59e-90 | 271 |
| MS.gene88242.t1 | AT3G44510 | 58.216 | 213 | 86 | 1 | 144 | 353 | 1 | 213 | 1.59e-90 | 271 |
| MS.gene88242.t1 | AT3G44510 | 58.216 | 213 | 86 | 1 | 144 | 353 | 1 | 213 | 1.59e-90 | 271 |
| MS.gene88242.t1 | AT1G74280 | 41.100 | 309 | 176 | 4 | 41 | 344 | 57 | 364 | 1.88e-88 | 271 |
| MS.gene88242.t1 | AT1G08310 | 61.307 | 199 | 76 | 1 | 43 | 240 | 8 | 206 | 1.09e-87 | 265 |
| MS.gene88242.t1 | AT3G54240 | 38.728 | 346 | 201 | 5 | 1 | 341 | 5 | 344 | 4.02e-87 | 267 |
| MS.gene88242.t1 | AT1G74290 | 41.447 | 304 | 169 | 6 | 41 | 337 | 57 | 358 | 6.56e-82 | 254 |
| MS.gene88242.t1 | AT1G74300 | 44.309 | 246 | 134 | 2 | 98 | 341 | 1 | 245 | 2.24e-74 | 231 |
| MS.gene88242.t1 | AT3G09690 | 31.515 | 330 | 168 | 9 | 43 | 329 | 163 | 477 | 7.08e-39 | 145 |
| MS.gene88242.t1 | AT3G09690 | 31.515 | 330 | 168 | 9 | 43 | 329 | 163 | 477 | 7.08e-39 | 145 |
| MS.gene88242.t1 | AT5G02970 | 30.380 | 316 | 190 | 7 | 43 | 329 | 160 | 474 | 3.94e-38 | 143 |
Find 75 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTTGTTTACGACACTCTT+AGG | 0.213807 | 4.4:+49151109 | MS.gene88242:CDS |
| GAAGTTGCAATTTACCTGTT+AGG | 0.236720 | 4.4:-49149589 | None:intergenic |
| ATCATTGTTGTTCATGGTTT+TGG | 0.249695 | 4.4:+49148087 | MS.gene88242:CDS |
| CATAGCATCATTGTTGTTCA+TGG | 0.265095 | 4.4:+49148081 | MS.gene88242:CDS |
| CACTATAATGTACAATTAAA+TGG | 0.265314 | 4.4:-49151323 | None:intergenic |
| GTGTTAATCATAGGTCTTCT+AGG | 0.323591 | 4.4:+49147901 | MS.gene88242:CDS |
| GGATCAAAATTTCATGTGAT+TGG | 0.325564 | 4.4:+49149520 | MS.gene88242:CDS |
| CCCTTCCTCCGAGTCTTGTA+AGG | 0.329037 | 4.4:+49150173 | MS.gene88242:CDS |
| TCAAATGAATCATTACTCTT+TGG | 0.340365 | 4.4:-49147955 | None:intergenic |
| ACAAATATTGATGATGATCT+AGG | 0.342121 | 4.4:-49151405 | None:intergenic |
| TTCAGTGAGCGTTTAGGATT+CGG | 0.348910 | 4.4:-49149451 | None:intergenic |
| AATGGATTACTAAGCTTCAT+TGG | 0.356183 | 4.4:-49151171 | None:intergenic |
| CATTTAATTGTACATTATAG+TGG | 0.365536 | 4.4:+49151324 | MS.gene88242:CDS |
| CATTATGATCGAGCTGGTTA+TGG | 0.368010 | 4.4:+49149418 | MS.gene88242:CDS |
| AAGTTGCAATTTACCTGTTA+GGG | 0.372204 | 4.4:-49149588 | None:intergenic |
| CTAGCTGATCAGTTACAAAT+AGG | 0.376702 | 4.4:+49149499 | MS.gene88242:CDS |
| GGATGACTGCCTTTGGCAAT+TGG | 0.381714 | 4.4:+49151139 | MS.gene88242:CDS |
| ATTGTACATTATAGTGGCTT+AGG | 0.401252 | 4.4:+49151330 | MS.gene88242:CDS |
| TCATGTGATTGGAGTTTCAA+TGG | 0.403080 | 4.4:+49149531 | MS.gene88242:CDS |
| GGTTGTTTACGACACTCTTA+GGG | 0.404731 | 4.4:+49151110 | MS.gene88242:CDS |
| ACAGAAGTTCAGTTCACATT+TGG | 0.407040 | 4.4:+49151205 | MS.gene88242:CDS |
| GGAAGGCCATTCATAGTTGA+TGG | 0.414424 | 4.4:-49150152 | None:intergenic |
| GTCTGAACTATATCCCTAAC+AGG | 0.419276 | 4.4:+49149575 | MS.gene88242:CDS |
| ACGACACTCTTAGGGGTGAT+TGG | 0.421666 | 4.4:+49151118 | MS.gene88242:CDS |
| TTGTAAGGGATGACTATAGA+AGG | 0.426627 | 4.4:+49150188 | MS.gene88242:CDS |
| AGGGTTTCCAATGCTTACTA+AGG | 0.433797 | 4.4:+49150363 | MS.gene88242:CDS |
| CATGTGATTGGAGTTTCAAT+GGG | 0.437296 | 4.4:+49149532 | MS.gene88242:CDS |
| AAGTTCAGTTCACATTTGGC+AGG | 0.447362 | 4.4:+49151209 | MS.gene88242:CDS |
| TTTCTTGCTTATAGAGAAAG+TGG | 0.467006 | 4.4:+49148036 | MS.gene88242:CDS |
| CAACATTTGTGAAGGCTAGC+TGG | 0.469638 | 4.4:+49150109 | MS.gene88242:intron |
| GAATCATTACTCTTTGGTGC+TGG | 0.470717 | 4.4:-49147949 | None:intergenic |
| TCTCGTTCGTTGAAGAATGC+TGG | 0.471001 | 4.4:-49150316 | None:intergenic |
| CAATATCATGAAGTTATAGA+TGG | 0.474649 | 4.4:+49151297 | MS.gene88242:CDS |
| AAGAACAATACTTGTGGTGC+AGG | 0.474769 | 4.4:-49148132 | None:intergenic |
| GATGACTGCCTTTGGCAATT+GGG | 0.476135 | 4.4:+49151140 | MS.gene88242:CDS |
| CTCCTAGACTGTTGCACTGG+TGG | 0.479400 | 4.4:+49150248 | MS.gene88242:CDS |
| GGTGATTGGATGACTGCCTT+TGG | 0.493480 | 4.4:+49151132 | MS.gene88242:CDS |
| GCAGTAATAGTGTTAATCAT+AGG | 0.496651 | 4.4:+49147892 | MS.gene88242:CDS |
| TCCTAGACTGTTGCACTGGT+GGG | 0.501884 | 4.4:+49150249 | MS.gene88242:CDS |
| ACTACTTGCAGGACAAATTG+AGG | 0.504704 | 4.4:+49151082 | MS.gene88242:intron |
| AATCATAGGTCTTCTAGGAA+TGG | 0.507432 | 4.4:+49147906 | MS.gene88242:CDS |
| GATATAGTTCAGACAACTCC+AGG | 0.511826 | 4.4:-49149566 | None:intergenic |
| TAACTCACCTTAGTAAGCAT+TGG | 0.511905 | 4.4:-49150370 | None:intergenic |
| AATGAACCTTTGAATTTGAG+AGG | 0.517660 | 4.4:-49151253 | None:intergenic |
| CACCAACCATCAACTATGAA+TGG | 0.519645 | 4.4:+49150146 | MS.gene88242:CDS |
| ACTTCATGATATTGTATCCA+TGG | 0.520270 | 4.4:-49151288 | None:intergenic |
| CAATGGGATCATATGCTACC+TGG | 0.523734 | 4.4:+49149548 | MS.gene88242:CDS |
| CCCTTACAAGACTCGGAGGA+AGG | 0.526933 | 4.4:-49150174 | None:intergenic |
| CAGGAACTAATAGATGAACT+TGG | 0.532782 | 4.4:+49149382 | MS.gene88242:intron |
| TTTCTATGACAGAATTTGAA+GGG | 0.536015 | 4.4:-49150288 | None:intergenic |
| CCTTCCTCCGAGTCTTGTAA+GGG | 0.541004 | 4.4:+49150174 | MS.gene88242:CDS |
| GGCCATTCATAGTTGATGGT+TGG | 0.544228 | 4.4:-49150148 | None:intergenic |
| ACAAGAATTCAACTCAGTGA+TGG | 0.568319 | 4.4:+49148009 | MS.gene88242:CDS |
| TAGTACCCTCTCAAATTCAA+AGG | 0.577110 | 4.4:+49151247 | MS.gene88242:CDS |
| ACCCACCAGTGCAACAGTCT+AGG | 0.583604 | 4.4:-49150250 | None:intergenic |
| ATCAAATTCCCAATTGCCAA+AGG | 0.583905 | 4.4:-49151148 | None:intergenic |
| ATGAACCTTTGAATTTGAGA+GGG | 0.584011 | 4.4:-49151252 | None:intergenic |
| ATTCTGCATTATGATCGAGC+TGG | 0.586465 | 4.4:+49149412 | MS.gene88242:CDS |
| ATTCTCCTAGACTGTTGCAC+TGG | 0.587673 | 4.4:+49150245 | MS.gene88242:CDS |
| TAGAGAAAGTGGTGTTACAA+AGG | 0.595237 | 4.4:+49148047 | MS.gene88242:CDS |
| TATCATGAAGTTATAGATGG+TGG | 0.597838 | 4.4:+49151300 | MS.gene88242:CDS |
| CCTTACAAGACTCGGAGGAA+GGG | 0.597855 | 4.4:-49150173 | None:intergenic |
| AACTTATTAAGATTGCTATG+TGG | 0.599879 | 4.4:+49150212 | MS.gene88242:CDS |
| ACAAGACTCGGAGGAAGGGA+AGG | 0.605540 | 4.4:-49150169 | None:intergenic |
| TTAGTAAGCATTGGAAACCC+TGG | 0.610778 | 4.4:-49150361 | None:intergenic |
| TCATTTCAGAGAAGCTACCA+TGG | 0.610823 | 4.4:+49151271 | MS.gene88242:CDS |
| ACATTATAGTGGCTTAGGCG+AGG | 0.611833 | 4.4:+49151335 | MS.gene88242:CDS |
| AGTTCAGTTCACATTTGGCA+GGG | 0.616400 | 4.4:+49151210 | MS.gene88242:CDS |
| GCAGGACAAATTGAGGCACC+AGG | 0.617002 | 4.4:+49151089 | MS.gene88242:intron |
| TAGTCATCCCTTACAAGACT+CGG | 0.618049 | 4.4:-49150181 | None:intergenic |
| TTTGTGAAGGCTAGCTGGTG+TGG | 0.620064 | 4.4:+49150114 | MS.gene88242:intron |
| TAAGAGTGTCGTAAACAACC+TGG | 0.641932 | 4.4:-49151107 | None:intergenic |
| ACTGGTGGGTGAGTCAAAAG+TGG | 0.654369 | 4.4:+49150263 | MS.gene88242:CDS |
| GTTGTTTACGACACTCTTAG+GGG | 0.677684 | 4.4:+49151111 | MS.gene88242:CDS |
| TCATCCCTTACAAGACTCGG+AGG | 0.715779 | 4.4:-49150178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTAAATTCAAAAAATA+TGG | - | chr4.4:49149972-49149991 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAATTTAGAAATA+GGG | + | chr4.4:49149973-49149992 | MS.gene88242:intron | 10.0% |
| !!! | TATTTTTTGAATTTAGAAAT+AGG | + | chr4.4:49149972-49149991 | MS.gene88242:intron | 10.0% |
| !!! | TTTATTTTTTTAAGTTTAAG+GGG | + | chr4.4:49148283-49148302 | MS.gene88242:intron | 10.0% |
| !!! | TTTTTTGAAATTTTACATAT+CGG | + | chr4.4:49149943-49149962 | MS.gene88242:intron | 10.0% |
| !! | ATTTACATATTTCAAAATTG+CGG | - | chr4.4:49148489-49148508 | None:intergenic | 15.0% |
| !! | ATTTGATGTGTTTAATTATT+GGG | + | chr4.4:49148202-49148221 | MS.gene88242:intron | 15.0% |
| !! | TAAGTTAAAAATACAACAAA+AGG | - | chr4.4:49149084-49149103 | None:intergenic | 15.0% |
| !! | TATTTGATGTGTTTAATTAT+TGG | + | chr4.4:49148201-49148220 | MS.gene88242:intron | 15.0% |
| !!! | TTTTTGAAATTTTACATATC+GGG | + | chr4.4:49149944-49149963 | MS.gene88242:intron | 15.0% |
| !!! | TTTTTTGAATTTAGAAATAG+GGG | + | chr4.4:49149974-49149993 | MS.gene88242:intron | 15.0% |
| !! | AAATGAGTGAATAAACAAAT+TGG | + | chr4.4:49150596-49150615 | MS.gene88242:intron | 20.0% |
| !! | AATGCATCTAATGATTTATT+AGG | + | chr4.4:49150569-49150588 | MS.gene88242:intron | 20.0% |
| !! | AGAACAACAATATTTGATAT+TGG | - | chr4.4:49148841-49148860 | None:intergenic | 20.0% |
| !! | ATGTCAATTTGCAAAAATAA+GGG | - | chr4.4:49150656-49150675 | None:intergenic | 20.0% |
| !! | ATTTGTTTATTCACTCATTT+AGG | - | chr4.4:49150596-49150615 | None:intergenic | 20.0% |
| !! | CACTATAATGTACAATTAAA+TGG | - | chr4.4:49151326-49151345 | None:intergenic | 20.0% |
| !! | CATTTAATTGTACATTATAG+TGG | + | chr4.4:49151324-49151343 | MS.gene88242:CDS | 20.0% |
| !! | TATCAAAACTTGCAATATAA+CGG | - | chr4.4:49148366-49148385 | None:intergenic | 20.0% |
| !! | TATGTCAATTTGCAAAAATA+AGG | - | chr4.4:49150657-49150676 | None:intergenic | 20.0% |
| !! | TTAAGATGACAAATTTCATA+GGG | - | chr4.4:49150822-49150841 | None:intergenic | 20.0% |
| !!! | AATTGCTAAAAGTTTTTTAG+AGG | - | chr4.4:49148455-49148474 | None:intergenic | 20.0% |
| !!! | AGAACAAATTTTTCAGTAAT+TGG | + | chr4.4:49150841-49150860 | MS.gene88242:intron | 20.0% |
| !!! | CCAAAAATTTACATAAGTTT+TGG | + | chr4.4:49148548-49148567 | MS.gene88242:intron | 20.0% |
| !!! | CCAAAACTTATGTAAATTTT+TGG | - | chr4.4:49148551-49148570 | None:intergenic | 20.0% |
| !!! | GATAATTTAGAACTAGTAAT+AGG | - | chr4.4:49150943-49150962 | None:intergenic | 20.0% |
| !!! | GGTTTTGATCTTAATTTTAA+GGG | + | chr4.4:49148223-49148242 | MS.gene88242:intron | 20.0% |
| !!! | TGATGATGAAAATGATTTTA+TGG | + | chr4.4:49147981-49148000 | MS.gene88242:CDS | 20.0% |
| !!! | TTTGATAATGAAGCAAAATA+CGG | + | chr4.4:49148379-49148398 | MS.gene88242:intron | 20.0% |
| ! | AAAGCAATACTTTAATGACA+TGG | - | chr4.4:49149807-49149826 | None:intergenic | 25.0% |
| ! | AACATTGCATTTGTAACATA+AGG | - | chr4.4:49150073-49150092 | None:intergenic | 25.0% |
| ! | AACTTATTAAGATTGCTATG+TGG | + | chr4.4:49150212-49150231 | MS.gene88242:CDS | 25.0% |
| ! | AATAAGCTGAAAACAGATTA+TGG | - | chr4.4:49149021-49149040 | None:intergenic | 25.0% |
| ! | AATTGCAACTTCTAAATACT+AGG | + | chr4.4:49149600-49149619 | MS.gene88242:intron | 25.0% |
| ! | ACATTGCATTTGTAACATAA+GGG | - | chr4.4:49150072-49150091 | None:intergenic | 25.0% |
| ! | ATTTCCATAAACTACTTAGA+GGG | - | chr4.4:49148729-49148748 | None:intergenic | 25.0% |
| ! | CAATATCATGAAGTTATAGA+TGG | + | chr4.4:49151297-49151316 | MS.gene88242:CDS | 25.0% |
| ! | CAATGAGTTGTAAATTGTAA+TGG | + | chr4.4:49149252-49149271 | MS.gene88242:intron | 25.0% |
| ! | CATGAATCAGTGAAAAAATT+AGG | - | chr4.4:49149641-49149660 | None:intergenic | 25.0% |
| ! | CATTACAATTTACAACTCAT+TGG | - | chr4.4:49149254-49149273 | None:intergenic | 25.0% |
| ! | CTTAAGATGACAAATTTCAT+AGG | - | chr4.4:49150823-49150842 | None:intergenic | 25.0% |
| ! | CTTAATCCAAAAAATATGCA+TGG | + | chr4.4:49149838-49149857 | MS.gene88242:intron | 25.0% |
| ! | GAAACATACAAATACGTATT+TGG | - | chr4.4:49150050-49150069 | None:intergenic | 25.0% |
| ! | GGGAATTGTTAAAAATAAAG+GGG | + | chr4.4:49150006-49150025 | MS.gene88242:intron | 25.0% |
| ! | GGGGAATTGTTAAAAATAAA+GGG | + | chr4.4:49150005-49150024 | MS.gene88242:intron | 25.0% |
| ! | TAAAAGTTCAACATTTGTGA+AGG | + | chr4.4:49150101-49150120 | MS.gene88242:intron | 25.0% |
| ! | TATATTGACATTGAATCTTC+AGG | + | chr4.4:49149363-49149382 | MS.gene88242:intron | 25.0% |
| ! | TCAAATGAATCATTACTCTT+TGG | - | chr4.4:49147958-49147977 | None:intergenic | 25.0% |
| ! | TGGGGAATTGTTAAAAATAA+AGG | + | chr4.4:49150004-49150023 | MS.gene88242:intron | 25.0% |
| ! | TTTCTATGACAGAATTTGAA+GGG | - | chr4.4:49150291-49150310 | None:intergenic | 25.0% |
| !! | ATTTTTACCATCACTGAATT+TGG | + | chr4.4:49149685-49149704 | MS.gene88242:intron | 25.0% |
| !! | TTTTCTATGACAGAATTTGA+AGG | - | chr4.4:49150292-49150311 | None:intergenic | 25.0% |
| !! | TTTTTACCATCACTGAATTT+GGG | + | chr4.4:49149686-49149705 | MS.gene88242:intron | 25.0% |
| !!! | AAATTTTAGAGAGAATTCCA+GGG | + | chr4.4:49150344-49150363 | MS.gene88242:CDS | 25.0% |
| !!! | ACAAATATTGATGATGATCT+AGG | - | chr4.4:49151408-49151427 | None:intergenic | 25.0% |
| !!! | GGGTTTTGATCTTAATTTTA+AGG | + | chr4.4:49148222-49148241 | MS.gene88242:intron | 25.0% |
| !!! | TTGTAAATTGTAATGGATTC+TGG | + | chr4.4:49149259-49149278 | MS.gene88242:intron | 25.0% |
| !!! | TTTCACTGATTCATGATTTT+AGG | + | chr4.4:49149646-49149665 | MS.gene88242:intron | 25.0% |
| AAACTACAAGCTATACTTGA+TGG | - | chr4.4:49148622-49148641 | None:intergenic | 30.0% | |
| AACTACAAGCTATACTTGAT+GGG | - | chr4.4:49148621-49148640 | None:intergenic | 30.0% | |
| AAGCAAAATACGGATAAATG+AGG | + | chr4.4:49148389-49148408 | MS.gene88242:intron | 30.0% | |
| AAGTTGCAATTTACCTGTTA+GGG | - | chr4.4:49149591-49149610 | None:intergenic | 30.0% | |
| AATGAACCTTTGAATTTGAG+AGG | - | chr4.4:49151256-49151275 | None:intergenic | 30.0% | |
| ACTTCATGATATTGTATCCA+TGG | - | chr4.4:49151291-49151310 | None:intergenic | 30.0% | |
| AGAACTAGTAATAGGCAAAT+TGG | - | chr4.4:49150935-49150954 | None:intergenic | 30.0% | |
| ATAGATAGATGCAAAATGTC+AGG | + | chr4.4:49148307-49148326 | MS.gene88242:intron | 30.0% | |
| ATAGTCTATGTTCTCAACAA+TGG | - | chr4.4:49149183-49149202 | None:intergenic | 30.0% | |
| ATGAACCTTTGAATTTGAGA+GGG | - | chr4.4:49151255-49151274 | None:intergenic | 30.0% | |
| ATTGTACATTATAGTGGCTT+AGG | + | chr4.4:49151330-49151349 | MS.gene88242:CDS | 30.0% | |
| GAAATCAAGAACAATACTTG+TGG | - | chr4.4:49148141-49148160 | None:intergenic | 30.0% | |
| GATTTCCATAAACTACTTAG+AGG | - | chr4.4:49148730-49148749 | None:intergenic | 30.0% | |
| GCAGTAATAGTGTTAATCAT+AGG | + | chr4.4:49147892-49147911 | MS.gene88242:CDS | 30.0% | |
| GGATCAAAATTTCATGTGAT+TGG | + | chr4.4:49149520-49149539 | MS.gene88242:CDS | 30.0% | |
| TAACTCAATCCTACAAAACA+AGG | + | chr4.4:49148574-49148593 | MS.gene88242:intron | 30.0% | |
| TAGATAGATGCAAAATGTCA+GGG | + | chr4.4:49148308-49148327 | MS.gene88242:intron | 30.0% | |
| TATCATGAAGTTATAGATGG+TGG | + | chr4.4:49151300-49151319 | MS.gene88242:CDS | 30.0% | |
| TCTCAGTTAGCATATTAGAA+TGG | - | chr4.4:49149343-49149362 | None:intergenic | 30.0% | |
| TTTCTTGCTTATAGAGAAAG+TGG | + | chr4.4:49148036-49148055 | MS.gene88242:CDS | 30.0% | |
| TTTGACCAATGCTTACAATT+TGG | - | chr4.4:49150626-49150645 | None:intergenic | 30.0% | |
| ! | TTCCAGCAGATAGATATTTT+AGG | - | chr4.4:49150967-49150986 | None:intergenic | 30.0% |
| ! | TTCTGTTTTCTTCTGAACTA+GGG | + | chr4.4:49148877-49148896 | MS.gene88242:intron | 30.0% |
| ! | TTGTTCAGAGTATTATAGCA+AGG | + | chr4.4:49150408-49150427 | MS.gene88242:intron | 30.0% |
| ! | TTTCTGTTTTCTTCTGAACT+AGG | + | chr4.4:49148876-49148895 | MS.gene88242:intron | 30.0% |
| ! | TTTTACCATCACTGAATTTG+GGG | + | chr4.4:49149687-49149706 | MS.gene88242:intron | 30.0% |
| !! | AATGGATTACTAAGCTTCAT+TGG | - | chr4.4:49151174-49151193 | None:intergenic | 30.0% |
| !! | ATCATTGTTGTTCATGGTTT+TGG | + | chr4.4:49148087-49148106 | MS.gene88242:CDS | 30.0% |
| !! | ATTTGGCTCAAATGCATTTT+TGG | - | chr4.4:49150033-49150052 | None:intergenic | 30.0% |
| !! | GAAATTTTAGAGAGAATTCC+AGG | + | chr4.4:49150343-49150362 | MS.gene88242:CDS | 30.0% |
| !! | TAAGCACTTTTGAGAGTAAT+TGG | + | chr4.4:49148965-49148984 | MS.gene88242:intron | 30.0% |
| !! | TTGTTTTGTAGGATTGAGTT+AGG | - | chr4.4:49148575-49148594 | None:intergenic | 30.0% |
| !!! | ACTGAACTTCTGTTATTTTG+AGG | - | chr4.4:49151198-49151217 | None:intergenic | 30.0% |
| !!! | ATATGGCCATGCATATTTTT+TGG | - | chr4.4:49149847-49149866 | None:intergenic | 30.0% |
| !!! | ATTTTGAAGGCACTTTTACT+TGG | + | chr4.4:49151360-49151379 | MS.gene88242:CDS | 30.0% |
| !!! | CTGAACTTCTGTTATTTTGA+GGG | - | chr4.4:49151197-49151216 | None:intergenic | 30.0% |
| !!! | TTTTGAAGGCACTTTTACTT+GGG | + | chr4.4:49151361-49151380 | MS.gene88242:CDS | 30.0% |
| AAAATTGGTCCTTAGCAACA+TGG | + | chr4.4:49150888-49150907 | MS.gene88242:intron | 35.0% | |
| ACAAGAATTCAACTCAGTGA+TGG | + | chr4.4:49148009-49148028 | MS.gene88242:CDS | 35.0% | |
| ACAGAAGTTCAGTTCACATT+TGG | + | chr4.4:49151205-49151224 | MS.gene88242:CDS | 35.0% | |
| ACATCAATTCCATGTTGCTA+AGG | - | chr4.4:49150900-49150919 | None:intergenic | 35.0% | |
| ACTTGGATCGTAGTTAAATG+TGG | + | chr4.4:49150456-49150475 | MS.gene88242:intron | 35.0% | |
| ATAAGCCTTAAATGCAGTGA+TGG | + | chr4.4:49149915-49149934 | MS.gene88242:intron | 35.0% | |
| ATCAAATTCCCAATTGCCAA+AGG | - | chr4.4:49151151-49151170 | None:intergenic | 35.0% | |
| CAGGAACTAATAGATGAACT+TGG | + | chr4.4:49149382-49149401 | MS.gene88242:intron | 35.0% | |
| CATGTGATTGGAGTTTCAAT+GGG | + | chr4.4:49149532-49149551 | MS.gene88242:CDS | 35.0% | |
| CCTACAAAACAAGGTTGTTA+GGG | + | chr4.4:49148583-49148602 | MS.gene88242:intron | 35.0% | |
| CTACAAAACAAGGTTGTTAG+GGG | + | chr4.4:49148584-49148603 | MS.gene88242:intron | 35.0% | |
| CTAGCTGATCAGTTACAAAT+AGG | + | chr4.4:49149499-49149518 | MS.gene88242:CDS | 35.0% | |
| CTCCTAAAATATCTATCTGC+TGG | + | chr4.4:49150962-49150981 | MS.gene88242:intron | 35.0% | |
| CTTGTAGTTTACTGATAAGC+GGG | + | chr4.4:49148632-49148651 | MS.gene88242:intron | 35.0% | |
| GAAATTAGTCGCTAATGAGT+TGG | - | chr4.4:49150800-49150819 | None:intergenic | 35.0% | |
| GAAGTTGCAATTTACCTGTT+AGG | - | chr4.4:49149592-49149611 | None:intergenic | 35.0% | |
| GCATGTCAGTTAAACTCTTA+CGG | + | chr4.4:49151024-49151043 | MS.gene88242:intron | 35.0% | |
| GCTTGTAGTTTACTGATAAG+CGG | + | chr4.4:49148631-49148650 | MS.gene88242:intron | 35.0% | |
| GTAACCCTCTAAGTAGTTTA+TGG | + | chr4.4:49148722-49148741 | MS.gene88242:intron | 35.0% | |
| GTGTTAATCATAGGTCTTCT+AGG | + | chr4.4:49147901-49147920 | MS.gene88242:CDS | 35.0% | |
| GTTACAGGATAATGCATATG+TGG | + | chr4.4:49149758-49149777 | MS.gene88242:intron | 35.0% | |
| GTTATCCATCACTGCATTTA+AGG | - | chr4.4:49149923-49149942 | None:intergenic | 35.0% | |
| TAACTCACCTTAGTAAGCAT+TGG | - | chr4.4:49150373-49150392 | None:intergenic | 35.0% | |
| TAGAAATAGGGGACTAAAGT+GGG | + | chr4.4:49149985-49150004 | MS.gene88242:intron | 35.0% | |
| TAGTACCCTCTCAAATTCAA+AGG | + | chr4.4:49151247-49151266 | MS.gene88242:CDS | 35.0% | |
| TAGTAGTCTATTCAGATCGT+CGG | + | chr4.4:49148518-49148537 | MS.gene88242:intron | 35.0% | |
| TCATGTGATTGGAGTTTCAA+TGG | + | chr4.4:49149531-49149550 | MS.gene88242:CDS | 35.0% | |
| TCCTACAAAACAAGGTTGTT+AGG | + | chr4.4:49148582-49148601 | MS.gene88242:intron | 35.0% | |
| TGGATTGATTACCGGAAAAT+TGG | + | chr4.4:49150873-49150892 | MS.gene88242:intron | 35.0% | |
| TGGCAAGTCAATAGGTTATA+TGG | - | chr4.4:49149864-49149883 | None:intergenic | 35.0% | |
| TGTGATATGTTACTACTTGC+AGG | + | chr4.4:49151071-49151090 | MS.gene88242:intron | 35.0% | |
| TGTTCTCAACAATGGTTATC+AGG | - | chr4.4:49149175-49149194 | None:intergenic | 35.0% | |
| TTAGAAATAGGGGACTAAAG+TGG | + | chr4.4:49149984-49150003 | MS.gene88242:intron | 35.0% | |
| TTAGCAACATGGAATTGATG+TGG | + | chr4.4:49150899-49150918 | MS.gene88242:intron | 35.0% | |
| TTGAATAATGAGCTAGCAAG+TGG | + | chr4.4:49149732-49149751 | MS.gene88242:intron | 35.0% | |
| TTGTAAGGGATGACTATAGA+AGG | + | chr4.4:49150188-49150207 | MS.gene88242:CDS | 35.0% | |
| ! | AATCATAGGTCTTCTAGGAA+TGG | + | chr4.4:49147906-49147925 | MS.gene88242:CDS | 35.0% |
| ! | AATTTTCCGGTAATCAATCC+AGG | - | chr4.4:49150874-49150893 | None:intergenic | 35.0% |
| ! | ACTTTTAGCAATTGCAGTTG+CGG | + | chr4.4:49148462-49148481 | MS.gene88242:intron | 35.0% |
| ! | CATAGCATCATTGTTGTTCA+TGG | + | chr4.4:49148081-49148100 | MS.gene88242:CDS | 35.0% |
| ! | TATAGCAAGGTTTTACATCG+TGG | + | chr4.4:49150421-49150440 | MS.gene88242:intron | 35.0% |
| !! | AATGGTTATCAGGTCTTGTT+TGG | - | chr4.4:49149165-49149184 | None:intergenic | 35.0% |
| !! | ATCTGTTAACTTGCTGTCAA+GGG | + | chr4.4:49150716-49150735 | MS.gene88242:intron | 35.0% |
| !! | TAGAGAAAGTGGTGTTACAA+AGG | + | chr4.4:49148047-49148066 | MS.gene88242:CDS | 35.0% |
| !! | TGTCAAGTTGAATAATGAGC+TGG | - | chr4.4:49149884-49149903 | None:intergenic | 35.0% |
| !!! | CTTCTGTTATTTTGAGGGAA+TGG | - | chr4.4:49151192-49151211 | None:intergenic | 35.0% |
| !!! | TTTGAAGGCACTTTTACTTG+GGG | + | chr4.4:49151362-49151381 | MS.gene88242:CDS | 35.0% |
| AAGAACAATACTTGTGGTGC+AGG | - | chr4.4:49148135-49148154 | None:intergenic | 40.0% | |
| AAGTTCAGTTCACATTTGGC+AGG | + | chr4.4:49151209-49151228 | MS.gene88242:CDS | 40.0% | |
| ACTACTTGCAGGACAAATTG+AGG | + | chr4.4:49151082-49151101 | MS.gene88242:intron | 40.0% | |
| AGAAATAGGGGACTAAAGTG+GGG | + | chr4.4:49149986-49150005 | MS.gene88242:intron | 40.0% | |
| AGGGTTTCCAATGCTTACTA+AGG | + | chr4.4:49150363-49150382 | MS.gene88242:CDS | 40.0% | |
| AGGTTGTTTACGACACTCTT+AGG | + | chr4.4:49151109-49151128 | MS.gene88242:CDS | 40.0% | |
| AGTTCAGTTCACATTTGGCA+GGG | + | chr4.4:49151210-49151229 | MS.gene88242:CDS | 40.0% | |
| ATTCTGCATTATGATCGAGC+TGG | + | chr4.4:49149412-49149431 | MS.gene88242:CDS | 40.0% | |
| CACCAACCATCAACTATGAA+TGG | + | chr4.4:49150146-49150165 | MS.gene88242:CDS | 40.0% | |
| CATTATGATCGAGCTGGTTA+TGG | + | chr4.4:49149418-49149437 | MS.gene88242:CDS | 40.0% | |
| GACCAATGCTTACAATTTGG+AGG | - | chr4.4:49150623-49150642 | None:intergenic | 40.0% | |
| GATATAGTTCAGACAACTCC+AGG | - | chr4.4:49149569-49149588 | None:intergenic | 40.0% | |
| GCATGTCTAAGTCTCATGTA+TGG | - | chr4.4:49149302-49149321 | None:intergenic | 40.0% | |
| GGACACGTCATAAGTAGTTT+AGG | - | chr4.4:49149000-49149019 | None:intergenic | 40.0% | |
| GGTTGTTTACGACACTCTTA+GGG | + | chr4.4:49151110-49151129 | MS.gene88242:CDS | 40.0% | |
| GTCCTCCAAATTGTAAGCAT+TGG | + | chr4.4:49150618-49150637 | MS.gene88242:intron | 40.0% | |
| GTCTGAACTATATCCCTAAC+AGG | + | chr4.4:49149575-49149594 | MS.gene88242:CDS | 40.0% | |
| GTTGTTTACGACACTCTTAG+GGG | + | chr4.4:49151111-49151130 | MS.gene88242:CDS | 40.0% | |
| TAATGAGCTGGCAAGTCAAT+AGG | - | chr4.4:49149872-49149891 | None:intergenic | 40.0% | |
| TAGTCATCCCTTACAAGACT+CGG | - | chr4.4:49150184-49150203 | None:intergenic | 40.0% | |
| TAGTTTACTGATAAGCGGGT+TGG | + | chr4.4:49148636-49148655 | MS.gene88242:intron | 40.0% | |
| TCATTTCAGAGAAGCTACCA+TGG | + | chr4.4:49151271-49151290 | MS.gene88242:CDS | 40.0% | |
| TCCAAACAGACCATAAGTGA+CGG | - | chr4.4:49148917-49148936 | None:intergenic | 40.0% | |
| TGTTCTAACACCGTCACTTA+TGG | + | chr4.4:49148904-49148923 | MS.gene88242:intron | 40.0% | |
| TTATGCCCCAAATTCAGTGA+TGG | - | chr4.4:49149695-49149714 | None:intergenic | 40.0% | |
| ! | GAATCATTACTCTTTGGTGC+TGG | - | chr4.4:49147952-49147971 | None:intergenic | 40.0% |
| ! | GTTGCTAAGGACCAATTTTC+CGG | - | chr4.4:49150887-49150906 | None:intergenic | 40.0% |
| ! | TTCAGTGAGCGTTTAGGATT+CGG | - | chr4.4:49149454-49149473 | None:intergenic | 40.0% |
| !! | CATCTGTTAACTTGCTGTCA+AGG | + | chr4.4:49150715-49150734 | MS.gene88242:intron | 40.0% |
| !! | TAAGAGTGTCGTAAACAACC+TGG | - | chr4.4:49151110-49151129 | None:intergenic | 40.0% |
| !! | TCACTTTTCAGTGAGCGTTT+AGG | - | chr4.4:49149460-49149479 | None:intergenic | 40.0% |
| !! | TTAGTAAGCATTGGAAACCC+TGG | - | chr4.4:49150364-49150383 | None:intergenic | 40.0% |
| !!! | CCCTAACAACCTTGTTTTGT+AGG | - | chr4.4:49148586-49148605 | None:intergenic | 40.0% |
| ACATTATAGTGGCTTAGGCG+AGG | + | chr4.4:49151335-49151354 | MS.gene88242:CDS | 45.0% | |
| ACCGTCACTTATGGTCTGTT+TGG | + | chr4.4:49148913-49148932 | MS.gene88242:intron | 45.0% | |
| ATTCTCCTAGACTGTTGCAC+TGG | + | chr4.4:49150245-49150264 | MS.gene88242:CDS | 45.0% | |
| CAACATTTGTGAAGGCTAGC+TGG | + | chr4.4:49150109-49150128 | MS.gene88242:intron | 45.0% | |
| CAATGGGATCATATGCTACC+TGG | + | chr4.4:49149548-49149567 | MS.gene88242:CDS | 45.0% | |
| CAGTTAACATGTCATCGCCA+TGG | - | chr4.4:49150742-49150761 | None:intergenic | 45.0% | |
| CATGGCGATGACATGTTAAC+TGG | + | chr4.4:49150740-49150759 | MS.gene88242:intron | 45.0% | |
| GATGACTGCCTTTGGCAATT+GGG | + | chr4.4:49151140-49151159 | MS.gene88242:CDS | 45.0% | |
| GGAAGGCCATTCATAGTTGA+TGG | - | chr4.4:49150155-49150174 | None:intergenic | 45.0% | |
| TCTCGTTCGTTGAAGAATGC+TGG | - | chr4.4:49150319-49150338 | None:intergenic | 45.0% | |
| !! | GGCCATTCATAGTTGATGGT+TGG | - | chr4.4:49150151-49150170 | None:intergenic | 45.0% |
| !! | TTTACTGATAAGCGGGTTGG+TGG | + | chr4.4:49148639-49148658 | MS.gene88242:intron | 45.0% |
| !!! | ATTTATTTTTTTAAGTTTAA+GGG | + | chr4.4:49148282-49148301 | MS.gene88242:intron | 5.0% |
| !!! | TATTTATTTTTTTAAGTTTA+AGG | + | chr4.4:49148281-49148300 | MS.gene88242:intron | 5.0% |
| ACGACACTCTTAGGGGTGAT+TGG | + | chr4.4:49151118-49151137 | MS.gene88242:CDS | 50.0% | |
| ACTCTGCACTCGGAGACATA+GGG | + | chr4.4:49148800-49148819 | MS.gene88242:intron | 50.0% | |
| CAAGGTTGTTAGGGGAGAGA+AGG | + | chr4.4:49148592-49148611 | MS.gene88242:intron | 50.0% | |
| CATGCGCCTGGATTGATTAC+CGG | + | chr4.4:49150865-49150884 | MS.gene88242:intron | 50.0% | |
| CCTTACAAGACTCGGAGGAA+GGG | - | chr4.4:49150176-49150195 | None:intergenic | 50.0% | |
| CTCGGAGACATAGGGACAAT+TGG | + | chr4.4:49148808-49148827 | MS.gene88242:intron | 50.0% | |
| GCTAGCAAGTGGCAAGTTAC+AGG | + | chr4.4:49149743-49149762 | MS.gene88242:intron | 50.0% | |
| GGATGACTGCCTTTGGCAAT+TGG | + | chr4.4:49151139-49151158 | MS.gene88242:CDS | 50.0% | |
| GGTGATTGGATGACTGCCTT+TGG | + | chr4.4:49151132-49151151 | MS.gene88242:CDS | 50.0% | |
| TCAGTAATTGGTCATGCGCC+TGG | + | chr4.4:49150853-49150872 | MS.gene88242:intron | 50.0% | |
| TCATCCCTTACAAGACTCGG+AGG | - | chr4.4:49150181-49150200 | None:intergenic | 50.0% | |
| ! | ACTGGTGGGTGAGTCAAAAG+TGG | + | chr4.4:49150263-49150282 | MS.gene88242:CDS | 50.0% |
| ! | CCTTCCTCCGAGTCTTGTAA+GGG | + | chr4.4:49150174-49150193 | MS.gene88242:CDS | 50.0% |
| ! | CTTAGGCGAGGCGATTTTGA+AGG | + | chr4.4:49151347-49151366 | MS.gene88242:CDS | 50.0% |
| ! | TCCTAGACTGTTGCACTGGT+GGG | + | chr4.4:49150249-49150268 | MS.gene88242:CDS | 50.0% |
| ! | TTTGTGAAGGCTAGCTGGTG+TGG | + | chr4.4:49150114-49150133 | MS.gene88242:intron | 50.0% |
| !! | TAACTTGCTGTCAAGGGCCA+TGG | + | chr4.4:49150722-49150741 | MS.gene88242:intron | 50.0% |
| ACAAGACTCGGAGGAAGGGA+AGG | - | chr4.4:49150172-49150191 | None:intergenic | 55.0% | |
| ACCCACCAGTGCAACAGTCT+AGG | - | chr4.4:49150253-49150272 | None:intergenic | 55.0% | |
| CACGACAACCACTCTGCACT+CGG | + | chr4.4:49148790-49148809 | MS.gene88242:intron | 55.0% | |
| CACTCTGCACTCGGAGACAT+AGG | + | chr4.4:49148799-49148818 | MS.gene88242:intron | 55.0% | |
| CCCTTACAAGACTCGGAGGA+AGG | - | chr4.4:49150177-49150196 | None:intergenic | 55.0% | |
| CGTGGCTGCATCACAACACT+TGG | + | chr4.4:49150439-49150458 | MS.gene88242:intron | 55.0% | |
| CTATGTCTCCGAGTGCAGAG+TGG | - | chr4.4:49148801-49148820 | None:intergenic | 55.0% | |
| CTCCTAGACTGTTGCACTGG+TGG | + | chr4.4:49150248-49150267 | MS.gene88242:CDS | 55.0% | |
| ! | CCCTTCCTCCGAGTCTTGTA+AGG | + | chr4.4:49150173-49150192 | MS.gene88242:CDS | 55.0% |
| ! | GCAGGACAAATTGAGGCACC+AGG | + | chr4.4:49151089-49151108 | MS.gene88242:intron | 55.0% |
| !! | GGTTGGTGGCTGGCGTAAAT+GGG | + | chr4.4:49148653-49148672 | MS.gene88242:intron | 55.0% |
| !! | CTGATAAGCGGGTTGGTGGC+TGG | + | chr4.4:49148643-49148662 | MS.gene88242:intron | 60.0% |
| !! | GGGTTGGTGGCTGGCGTAAA+TGG | + | chr4.4:49148652-49148671 | MS.gene88242:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 49147880 | 49151434 | 49147880 | ID=MS.gene88242 |
| chr4.4 | mRNA | 49147880 | 49151434 | 49147880 | ID=MS.gene88242.t1;Parent=MS.gene88242 |
| chr4.4 | exon | 49147880 | 49148143 | 49147880 | ID=MS.gene88242.t1.exon1;Parent=MS.gene88242.t1 |
| chr4.4 | CDS | 49147880 | 49148143 | 49147880 | ID=cds.MS.gene88242.t1;Parent=MS.gene88242.t1 |
| chr4.4 | exon | 49149385 | 49149596 | 49149385 | ID=MS.gene88242.t1.exon2;Parent=MS.gene88242.t1 |
| chr4.4 | CDS | 49149385 | 49149596 | 49149385 | ID=cds.MS.gene88242.t1;Parent=MS.gene88242.t1 |
| chr4.4 | exon | 49150123 | 49150384 | 49150123 | ID=MS.gene88242.t1.exon3;Parent=MS.gene88242.t1 |
| chr4.4 | CDS | 49150123 | 49150384 | 49150123 | ID=cds.MS.gene88242.t1;Parent=MS.gene88242.t1 |
| chr4.4 | exon | 49151093 | 49151434 | 49151093 | ID=MS.gene88242.t1.exon4;Parent=MS.gene88242.t1 |
| chr4.4 | CDS | 49151093 | 49151434 | 49151093 | ID=cds.MS.gene88242.t1;Parent=MS.gene88242.t1 |
| Gene Sequence |
| Protein sequence |
