AlfalfaGEDB | MS.gene91418

M. sativa cultivar XinJiangDaYe / MS.gene91418

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016787
PFAM: PF07859.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91418.t1	XP_003592446.2	96.9	324	9	1	1	324	1	323	3.50E-184	654.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91418.t1	Q5NUF4	80.7	321	59	2	5	324	10	328	2.0e-156	553.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91418.t1	G7IE27	96.9	324	9	1	1	324	1	323	2.5e-184	654.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049259	MS.gene91418	0.800251	1.57E-48	-1.69E-46
MS.gene050363	MS.gene91418	0.817256	3.62E-52	-1.69E-46
MS.gene050381	MS.gene91418	0.841075	5.92E-58	-1.69E-46
MS.gene050883	MS.gene91418	0.879082	1.67E-69	-1.69E-46
MS.gene051127	MS.gene91418	0.86783	1.02E-65	-1.69E-46
MS.gene051410	MS.gene91418	0.826145	3.19E-54	-1.69E-46
MS.gene05141	MS.gene91418	0.808584	2.88E-50	-1.69E-46
MS.gene051946	MS.gene91418	0.851389	9.16E-61	-1.69E-46
MS.gene052486	MS.gene91418	-0.805244	1.47E-49	-1.69E-46
MS.gene053069	MS.gene91418	0.801289	9.66E-49	-1.69E-46
MS.gene053420	MS.gene91418	0.827007	1.98E-54	-1.69E-46
MS.gene053549	MS.gene91418	0.812531	4.05E-51	-1.69E-46
MS.gene053561	MS.gene91418	0.822092	2.85E-53	-1.69E-46
MS.gene053826	MS.gene91418	0.813188	2.90E-51	-1.69E-46
MS.gene054708	MS.gene91418	0.810342	1.21E-50	-1.69E-46
MS.gene055124	MS.gene91418	0.808358	3.22E-50	-1.69E-46
MS.gene055139	MS.gene91418	0.818737	1.68E-52	-1.69E-46
MS.gene055154	MS.gene91418	0.827261	1.72E-54	-1.69E-46
MS.gene055202	MS.gene91418	0.803918	2.77E-49	-1.69E-46
MS.gene056310	MS.gene91418	0.840255	9.71E-58	-1.69E-46
MS.gene056311	MS.gene91418	0.870973	9.73E-67	-1.69E-46
MS.gene056313	MS.gene91418	0.830168	3.42E-55	-1.69E-46
MS.gene056504	MS.gene91418	-0.801423	9.07E-49	-1.69E-46
MS.gene056530	MS.gene91418	0.800351	1.50E-48	-1.69E-46
MS.gene057014	MS.gene91418	0.829515	4.93E-55	-1.69E-46
MS.gene057473	MS.gene91418	0.806751	7.06E-50	-1.69E-46
MS.gene057499	MS.gene91418	0.808064	3.72E-50	-1.69E-46
MS.gene058108	MS.gene91418	0.821085	4.87E-53	-1.69E-46
MS.gene058109	MS.gene91418	0.843057	1.77E-58	-1.69E-46
MS.gene058111	MS.gene91418	0.871964	4.57E-67	-1.69E-46
MS.gene058171	MS.gene91418	0.856604	2.88E-62	-1.69E-46
MS.gene058173	MS.gene91418	0.863488	2.40E-64	-1.69E-46
MS.gene058175	MS.gene91418	0.863937	1.74E-64	-1.69E-46
MS.gene05837	MS.gene91418	-0.800828	1.20E-48	-1.69E-46
MS.gene058493	MS.gene91418	0.862181	6.08E-64	-1.69E-46
MS.gene058494	MS.gene91418	0.829233	5.77E-55	-1.69E-46
MS.gene058496	MS.gene91418	0.804802	1.81E-49	-1.69E-46
MS.gene058628	MS.gene91418	0.824029	1.01E-53	-1.69E-46
MS.gene058630	MS.gene91418	0.820667	6.08E-53	-1.69E-46
MS.gene05884	MS.gene91418	0.816023	6.85E-52	-1.69E-46
MS.gene059865	MS.gene91418	-0.803661	3.13E-49	-1.69E-46
MS.gene060187	MS.gene91418	0.813144	2.97E-51	-1.69E-46
MS.gene06077	MS.gene91418	-0.811733	6.04E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91418.t1	MTR_1g105020	96.914	324	9	1	1	324	1	323	0.0	644
MS.gene91418.t1	MTR_5g005850	57.055	326	134	4	2	324	7	329	1.49e-136	390
MS.gene91418.t1	MTR_3g450680	52.941	323	148	2	3	323	11	331	1.48e-120	350
MS.gene91418.t1	MTR_5g005920	51.852	324	148	4	5	323	10	330	8.62e-116	338
MS.gene91418.t1	MTR_7g051020	54.848	330	137	6	1	323	1	325	2.45e-115	337
MS.gene91418.t1	MTR_1g104930	54.711	329	136	6	1	323	1	322	2.34e-109	321
MS.gene91418.t1	MTR_5g005900	50.932	322	152	3	6	323	7	326	2.82e-109	321
MS.gene91418.t1	MTR_8g040860	49.527	317	157	2	7	323	15	328	1.99e-106	314
MS.gene91418.t1	MTR_1g104933	54.088	318	137	5	6	323	8	316	1.16e-104	309
MS.gene91418.t1	MTR_4g086510	44.343	327	168	8	1	323	1	317	1.14e-91	276
MS.gene91418.t1	MTR_4g086480	43.827	324	169	8	2	323	6	318	2.23e-89	270
MS.gene91418.t1	MTR_4g086470	43.827	324	169	8	2	323	5	317	2.43e-84	257
MS.gene91418.t1	MTR_7g056207	43.077	325	171	8	3	323	35	349	2.12e-83	256
MS.gene91418.t1	MTR_3g101420	40.764	314	176	5	11	323	10	314	2.02e-82	252
MS.gene91418.t1	MTR_4g086540	44.375	320	149	7	5	324	15	305	1.43e-81	250
MS.gene91418.t1	MTR_1g111280	32.704	318	196	8	10	319	28	335	1.07e-48	166
MS.gene91418.t1	MTR_7g406880	33.333	330	191	11	15	323	28	349	4.70e-48	165
MS.gene91418.t1	MTR_4g050140	33.939	330	193	11	4	323	1	315	1.54e-46	160
MS.gene91418.t1	MTR_1g012430	33.438	317	192	11	11	323	6	307	8.04e-41	145
MS.gene91418.t1	MTR_7g107040	30.696	316	201	11	15	324	14	317	4.42e-38	138
MS.gene91418.t1	MTR_3g012440	31.447	318	191	10	6	304	5	314	4.17e-35	130
MS.gene91418.t1	MTR_1g102160	36.842	228	124	7	20	238	23	239	7.59e-33	124
MS.gene91418.t1	MTR_8g035540	31.333	300	174	11	16	302	9	289	5.87e-31	119
MS.gene91418.t1	MTR_1g102170	33.208	265	150	9	21	273	43	292	7.51e-31	119
MS.gene91418.t1	MTR_8g035520	30.990	313	201	9	16	321	21	325	2.02e-30	117
MS.gene91418.t1	MTR_0007s0520	32.636	239	141	8	18	248	23	249	2.62e-30	117
MS.gene91418.t1	MTR_6g464120	38.378	185	102	4	21	203	29	203	2.79e-30	120
MS.gene91418.t1	MTR_6g464510	31.250	288	177	8	44	323	52	326	4.02e-29	114
MS.gene91418.t1	MTR_1g089310	29.730	296	169	8	21	296	38	314	1.20e-28	113
MS.gene91418.t1	MTR_1g089310	29.730	296	169	8	21	296	54	330	1.33e-28	113
MS.gene91418.t1	MTR_6g065120	28.261	322	193	12	21	323	33	335	7.07e-28	111
MS.gene91418.t1	MTR_6g065270	27.575	301	185	9	40	323	51	335	1.06e-27	110
MS.gene91418.t1	MTR_6g464320	31.385	325	190	14	15	321	17	326	4.74e-27	108
MS.gene91418.t1	MTR_1g082210	29.195	298	168	9	21	296	38	314	1.44e-26	107
MS.gene91418.t1	MTR_6g065340	27.458	295	173	9	40	323	64	328	2.88e-26	106
MS.gene91418.t1	MTR_8g035500	32.482	274	169	9	21	285	17	283	8.16e-26	105
MS.gene91418.t1	MTR_6g065430	26.752	314	204	9	21	324	31	328	1.93e-25	104
MS.gene91418.t1	MTR_6g464280	35.556	180	102	4	38	212	40	210	2.40e-25	103
MS.gene91418.t1	MTR_7g093950	27.744	328	193	11	21	323	38	346	3.63e-25	103
MS.gene91418.t1	MTR_6g065370	25.625	320	203	10	21	323	32	333	3.85e-25	103
MS.gene91418.t1	MTR_6g065400	25.857	321	201	11	21	323	32	333	2.23e-24	101
MS.gene91418.t1	MTR_6g065110	27.414	321	196	12	21	323	33	334	7.56e-24	100
MS.gene91418.t1	MTR_6g022710	28.627	255	146	7	62	283	146	397	1.82e-21	94.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91418.t1	AT1G47480	41.796	323	174	5	1	323	1	309	7.04e-81	248
MS.gene91418.t1	AT2G03550	38.907	311	178	7	14	323	11	310	3.90e-71	223
MS.gene91418.t1	AT3G48700	36.667	330	194	7	4	323	1	325	5.43e-71	223
MS.gene91418.t1	AT3G48690	39.329	328	183	9	4	323	1	320	6.99e-71	223
MS.gene91418.t1	AT1G49650	39.117	317	179	8	13	324	66	373	7.48e-69	219
MS.gene91418.t1	AT1G19190	37.231	325	187	9	4	323	1	313	2.56e-68	216
MS.gene91418.t1	AT1G49640	37.539	317	178	8	14	324	12	314	3.80e-68	216
MS.gene91418.t1	AT1G49660	38.485	330	182	10	4	324	1	318	9.34e-64	204
MS.gene91418.t1	AT1G68620	30.488	328	189	13	11	323	26	329	2.27e-38	139
MS.gene91418.t1	AT5G16080	30.154	325	201	10	11	323	31	341	4.91e-36	133
MS.gene91418.t1	AT3G05120	29.846	325	185	11	21	323	38	341	7.17e-35	130
MS.gene91418.t1	AT5G06570	31.928	332	210	9	1	323	1	325	1.76e-34	129
MS.gene91418.t1	AT5G06570	31.928	332	210	9	1	323	1	325	1.76e-34	129
MS.gene91418.t1	AT5G06570	31.928	332	210	9	1	323	16	340	3.27e-34	128
MS.gene91418.t1	AT5G06570	31.928	332	210	9	1	323	16	340	3.27e-34	128
MS.gene91418.t1	AT3G63010	30.769	286	160	7	21	285	38	306	8.16e-32	122
MS.gene91418.t1	AT2G45600	34.266	286	157	10	21	296	21	285	1.62e-31	120
MS.gene91418.t1	AT2G45610	29.518	332	209	9	8	323	1	323	1.17e-30	118
MS.gene91418.t1	AT5G27320	27.950	322	193	9	21	323	38	339	1.91e-30	118
MS.gene91418.t1	AT5G62180	32.039	309	180	12	21	313	21	315	1.02e-29	115
MS.gene91418.t1	AT5G23530	30.323	310	191	11	21	323	35	326	6.08e-29	114
MS.gene91418.t1	AT3G27320	28.287	251	137	8	70	283	131	375	3.65e-21	94.0
MS.gene91418.t1	AT3G27320	28.175	252	138	8	69	283	162	407	3.81e-21	94.0
MS.gene91418.t1	AT5G14310	27.843	255	150	5	62	283	140	393	1.29e-20	92.4

Find 67 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAATAGAATTCTGAGTTTC+AGG	0.180854	1.3:-71720790	None:intergenic
TTGAGTTTGGTTGGTGAGTT+TGG	0.225453	1.3:-71720062	None:intergenic
AAGTTCTCTGTCTATTTCTT+TGG	0.276032	1.3:-71719885	None:intergenic
ACAAAATTCCAAACTTTCAT+AGG	0.313695	1.3:-71720535	None:intergenic
GGAACAGTTGAACGTTTCTT+AGG	0.318313	1.3:+71719935	MS.gene91418:CDS
GGCTGTTGATGCTCCTAGTT+TGG	0.318919	1.3:+71720606	MS.gene91418:CDS
AAAGTTCACCTATGAAAGTT+TGG	0.319481	1.3:+71720527	MS.gene91418:CDS
CCTGGTGATGTGAAAATTAG+AGG	0.323872	1.3:+71720433	MS.gene91418:CDS
TGAATACGTGCAGAGATTAA+TGG	0.325811	1.3:-71720034	None:intergenic
GCTCCTAGTTTGGATATTAT+TGG	0.329779	1.3:+71720616	MS.gene91418:CDS
CTTCCTGCTGCTTATGATGA+TGG	0.347453	1.3:+71720235	MS.gene91418:CDS
CCAATCTTAGTTTACTATCA+TGG	0.355488	1.3:+71720091	MS.gene91418:CDS
ATTTAAGAGACAGAGGGATT+TGG	0.369398	1.3:+71720677	MS.gene91418:CDS
TCAATCCCACCAGGTGCATC+AGG	0.374795	1.3:-71720562	None:intergenic
GAATACGTGCAGAGATTAAT+GGG	0.378912	1.3:-71720033	None:intergenic
AACTCAGAATTCTATTGATA+TGG	0.381841	1.3:+71720795	MS.gene91418:CDS
GTCCCTGGATCAAGAGGAAT+TGG	0.386785	1.3:-71719974	None:intergenic
TAACCCTTTGATCAATCCTT+TGG	0.390755	1.3:+71720585	MS.gene91418:CDS
TACATCGGTGGTGATACTTC+AGG	0.391607	1.3:+71720355	MS.gene91418:CDS
GTTGTTGATGCTGTTGTTGA+TGG	0.412530	1.3:-71720290	None:intergenic
TGAGTTTGGTTGGTGAGTTT+GGG	0.415119	1.3:-71720061	None:intergenic
TTTGATGAGACACCTGTCCC+TGG	0.437099	1.3:-71719989	None:intergenic
CCATGATAGTAAACTAAGAT+TGG	0.442987	1.3:-71720091	None:intergenic
GCAGCAGGAAGAGGGTGTTC+TGG	0.450690	1.3:-71720223	None:intergenic
TCAACTGATTCTGACAAAAC+CGG	0.451108	1.3:-71720493	None:intergenic
CAGCCAAAGGATTGATCAAA+GGG	0.458708	1.3:-71720588	None:intergenic
CTGCTGCTTATGATGATGGT+TGG	0.469195	1.3:+71720239	MS.gene91418:CDS
CTTCTCCGTGTCTACAAAGA+TGG	0.477681	1.3:+71719914	MS.gene91418:CDS
CCACCAATTCCTCTTGATCC+AGG	0.478498	1.3:+71719971	MS.gene91418:CDS
GAACCATGGTTAATCAAATA+CGG	0.497534	1.3:+71720316	MS.gene91418:CDS
GCACTTCTTCGTGTTGGTAA+TGG	0.499383	1.3:+71720397	MS.gene91418:CDS
GTGGAACTTGTTCATGTTGA+AGG	0.503646	1.3:+71720739	MS.gene91418:CDS
TATGATGCTGTTAAGAAAAG+TGG	0.520687	1.3:+71720703	MS.gene91418:CDS
ATGAGAAGTGACCCATTTGA+GGG	0.529133	1.3:-71720266	None:intergenic
CACAATGCACTTCTTCGTGT+TGG	0.532810	1.3:+71720391	MS.gene91418:CDS
AATGAGAAGTGACCCATTTG+AGG	0.536918	1.3:-71720267	None:intergenic
TCATCATAAGCAGCAGGAAG+AGG	0.537637	1.3:-71720232	None:intergenic
AATGATGATTTAAGAGACAG+AGG	0.549281	1.3:+71720670	MS.gene91418:CDS
CTGTTCCATCTTTGTAGACA+CGG	0.552711	1.3:-71719919	None:intergenic
CAACCATCATCATAAGCAGC+AGG	0.553072	1.3:-71720238	None:intergenic
CAACCAATAATATCCAAACT+AGG	0.558309	1.3:-71720619	None:intergenic
ATTCCTCTTGATCCAGGGAC+AGG	0.559473	1.3:+71719977	MS.gene91418:CDS
ACAGCCAAAGGATTGATCAA+AGG	0.567861	1.3:-71720589	None:intergenic
CTTGTGAAGCAATGATATTG+AGG	0.569784	1.3:-71720162	None:intergenic
CCTGGATCAAGAGGAATTGG+TGG	0.569918	1.3:-71719971	None:intergenic
ACACCTGTCCCTGGATCAAG+AGG	0.577665	1.3:-71719980	None:intergenic
TCACCGTATTTGATTAACCA+TGG	0.580276	1.3:-71720319	None:intergenic
TTTGTGTACCCTGATGCACC+TGG	0.583326	1.3:+71720553	MS.gene91418:CDS
TATTGAGGTAACGTTGGTGA+AGG	0.593342	1.3:-71720147	None:intergenic
CATCATAAGCAGCAGGAAGA+GGG	0.596512	1.3:-71720231	None:intergenic
TTGTAGACACGGAGAAGAGG+TGG	0.600538	1.3:-71719908	None:intergenic
ATGATGATTTAAGAGACAGA+GGG	0.614435	1.3:+71720671	MS.gene91418:CDS
CACCAATTCCTCTTGATCCA+GGG	0.614544	1.3:+71719972	MS.gene91418:CDS
CAATCCCACCAGGTGCATCA+GGG	0.618557	1.3:-71720561	None:intergenic
AAGTGGTTGGAAAGGTGATG+TGG	0.619960	1.3:+71720720	MS.gene91418:CDS
ATGCTGTTAAGAAAAGTGGT+TGG	0.622921	1.3:+71720707	MS.gene91418:CDS
CAATGATATTGAGGTAACGT+TGG	0.625842	1.3:-71720153	None:intergenic
CTAGGAGCATCAACAGCCAA+AGG	0.626074	1.3:-71720601	None:intergenic
TGTACCCTGATGCACCTGGT+GGG	0.626526	1.3:+71720557	MS.gene91418:CDS
TCTTTGTAGACACGGAGAAG+AGG	0.629057	1.3:-71719911	None:intergenic
AATGGTGTTGAAACTTTACC+TGG	0.634525	1.3:+71720415	MS.gene91418:CDS
GTGTACCCTGATGCACCTGG+TGG	0.646477	1.3:+71720556	MS.gene91418:CDS
GTTAAGAAAAGTGGTTGGAA+AGG	0.652072	1.3:+71720712	MS.gene91418:CDS
ATCTTAGTTTACTATCATGG+TGG	0.653724	1.3:+71720094	MS.gene91418:CDS
GCATCAACAACGCTGAACCA+TGG	0.663012	1.3:+71720302	MS.gene91418:CDS
GGCTTCGAACTCCAAAACAA+AGG	0.663157	1.3:-71720472	None:intergenic
AAAGGGTTATCAATCCCACC+AGG	0.678428	1.3:-71720571	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AACTCAGAATTCTATTGATA+TGG	+	chr1.3:71720795-71720814	MS.gene91418:CDS	25.0%
!	ACAAAATTCCAAACTTTCAT+AGG	-	chr1.3:71720538-71720557	None:intergenic	25.0%
!!!	TAAGATGTTGATTTTTGTTG+CGG	+	chr1.3:71720645-71720664	MS.gene91418:CDS	25.0%
	AAAGTTCACCTATGAAAGTT+TGG	+	chr1.3:71720527-71720546	MS.gene91418:CDS	30.0%
	AATGATGATTTAAGAGACAG+AGG	+	chr1.3:71720670-71720689	MS.gene91418:CDS	30.0%
	ATCTTAGTTTACTATCATGG+TGG	+	chr1.3:71720094-71720113	MS.gene91418:CDS	30.0%
	ATGATGATTTAAGAGACAGA+GGG	+	chr1.3:71720671-71720690	MS.gene91418:CDS	30.0%
	CAACCAATAATATCCAAACT+AGG	-	chr1.3:71720622-71720641	None:intergenic	30.0%
	CCAATCTTAGTTTACTATCA+TGG	+	chr1.3:71720091-71720110	MS.gene91418:CDS	30.0%
	CCATGATAGTAAACTAAGAT+TGG	-	chr1.3:71720094-71720113	None:intergenic	30.0%
	GAACCATGGTTAATCAAATA+CGG	+	chr1.3:71720316-71720335	MS.gene91418:CDS	30.0%
	GCAACAAAAATCAACATCTT+AGG	-	chr1.3:71720646-71720665	None:intergenic	30.0%
	TATGATGCTGTTAAGAAAAG+TGG	+	chr1.3:71720703-71720722	MS.gene91418:CDS	30.0%
	TCAATAGAATTCTGAGTTTC+AGG	-	chr1.3:71720793-71720812	None:intergenic	30.0%
!	AAGTTCTCTGTCTATTTCTT+TGG	-	chr1.3:71719888-71719907	None:intergenic	30.0%
!	TTTTGTCAGAATCAGTTGAA+GGG	+	chr1.3:71720497-71720516	MS.gene91418:CDS	30.0%
!!	GATTTTGACCGTTTTTACAT+CGG	+	chr1.3:71720340-71720359	MS.gene91418:CDS	30.0%
!!!	AAGATGTTGATTTTTGTTGC+GGG	+	chr1.3:71720646-71720665	MS.gene91418:CDS	30.0%
!!!	TAGTTGCTTTTCCTTTGTTT+TGG	+	chr1.3:71720461-71720480	MS.gene91418:CDS	30.0%
	ATGCTGTTAAGAAAAGTGGT+TGG	+	chr1.3:71720707-71720726	MS.gene91418:CDS	35.0%
	ATTTAAGAGACAGAGGGATT+TGG	+	chr1.3:71720677-71720696	MS.gene91418:CDS	35.0%
	CAATGATATTGAGGTAACGT+TGG	-	chr1.3:71720156-71720175	None:intergenic	35.0%
	CTTGTGAAGCAATGATATTG+AGG	-	chr1.3:71720165-71720184	None:intergenic	35.0%
	GAATACGTGCAGAGATTAAT+GGG	-	chr1.3:71720036-71720055	None:intergenic	35.0%
	GCTCCTAGTTTGGATATTAT+TGG	+	chr1.3:71720616-71720635	MS.gene91418:CDS	35.0%
	GTTAAGAAAAGTGGTTGGAA+AGG	+	chr1.3:71720712-71720731	MS.gene91418:CDS	35.0%
	TAACCCTTTGATCAATCCTT+TGG	+	chr1.3:71720585-71720604	MS.gene91418:CDS	35.0%
	TATCACCACCGATGTAAAAA+CGG	-	chr1.3:71720351-71720370	None:intergenic	35.0%
	TCACCGTATTTGATTAACCA+TGG	-	chr1.3:71720322-71720341	None:intergenic	35.0%
	TGAATACGTGCAGAGATTAA+TGG	-	chr1.3:71720037-71720056	None:intergenic	35.0%
!	AATGGTGTTGAAACTTTACC+TGG	+	chr1.3:71720415-71720434	MS.gene91418:CDS	35.0%
!	GTTTTGTCAGAATCAGTTGA+AGG	+	chr1.3:71720496-71720515	MS.gene91418:CDS	35.0%
!	TCAACTGATTCTGACAAAAC+CGG	-	chr1.3:71720496-71720515	None:intergenic	35.0%
!!!	AGATGTTGATTTTTGTTGCG+GGG	+	chr1.3:71720647-71720666	MS.gene91418:CDS	35.0%
!!!	AGATTGGAAGCTTTTGAGTT+TGG	-	chr1.3:71720078-71720097	None:intergenic	35.0%
	AATGAGAAGTGACCCATTTG+AGG	-	chr1.3:71720270-71720289	None:intergenic	40.0%
	ACAGCCAAAGGATTGATCAA+AGG	-	chr1.3:71720592-71720611	None:intergenic	40.0%
	ATGAGAAGTGACCCATTTGA+GGG	-	chr1.3:71720269-71720288	None:intergenic	40.0%
	CAGCCAAAGGATTGATCAAA+GGG	-	chr1.3:71720591-71720610	None:intergenic	40.0%
	CTGTTCCATCTTTGTAGACA+CGG	-	chr1.3:71719922-71719941	None:intergenic	40.0%
	GGAACAGTTGAACGTTTCTT+AGG	+	chr1.3:71719935-71719954	MS.gene91418:CDS	40.0%
	GTTGTTGATGCTGTTGTTGA+TGG	-	chr1.3:71720293-71720312	None:intergenic	40.0%
!	CCTCTAATTTTCACATCACC+AGG	-	chr1.3:71720436-71720455	None:intergenic	40.0%
!	CCTGGTGATGTGAAAATTAG+AGG	+	chr1.3:71720433-71720452	MS.gene91418:CDS	40.0%
!	GTGGAACTTGTTCATGTTGA+AGG	+	chr1.3:71720739-71720758	MS.gene91418:CDS	40.0%
!	TATTGAGGTAACGTTGGTGA+AGG	-	chr1.3:71720150-71720169	None:intergenic	40.0%
!!	TGAGTTTGGTTGGTGAGTTT+GGG	-	chr1.3:71720064-71720083	None:intergenic	40.0%
!!	TTGAGTTTGGTTGGTGAGTT+TGG	-	chr1.3:71720065-71720084	None:intergenic	40.0%
!!	TTTGACCGTTTTTACATCGG+TGG	+	chr1.3:71720343-71720362	MS.gene91418:CDS	40.0%
!!!	ATGGTTGGTTTTCCCTCAAA+TGG	+	chr1.3:71720254-71720273	MS.gene91418:CDS	40.0%
!!!	TGGAAGCTTTTGAGTTTGGT+TGG	-	chr1.3:71720074-71720093	None:intergenic	40.0%
!!!	TGGTTGGTTTTCCCTCAAAT+GGG	+	chr1.3:71720255-71720274	MS.gene91418:CDS	40.0%
!!!	TTTGTTTTGGAGTTCGAAGC+CGG	+	chr1.3:71720474-71720493	MS.gene91418:CDS	40.0%
	AAAGGGTTATCAATCCCACC+AGG	-	chr1.3:71720574-71720593	None:intergenic	45.0%
	AAGTGGTTGGAAAGGTGATG+TGG	+	chr1.3:71720720-71720739	MS.gene91418:CDS	45.0%
	CAACCATCATCATAAGCAGC+AGG	-	chr1.3:71720241-71720260	None:intergenic	45.0%
	CACAATGCACTTCTTCGTGT+TGG	+	chr1.3:71720391-71720410	MS.gene91418:CDS	45.0%
	CACCAATTCCTCTTGATCCA+GGG	+	chr1.3:71719972-71719991	MS.gene91418:CDS	45.0%
	CATCATAAGCAGCAGGAAGA+GGG	-	chr1.3:71720234-71720253	None:intergenic	45.0%
	CTTCTCCGTGTCTACAAAGA+TGG	+	chr1.3:71719914-71719933	MS.gene91418:CDS	45.0%
	GGCTTCGAACTCCAAAACAA+AGG	-	chr1.3:71720475-71720494	None:intergenic	45.0%
	TACATCGGTGGTGATACTTC+AGG	+	chr1.3:71720355-71720374	MS.gene91418:CDS	45.0%
	TCATCATAAGCAGCAGGAAG+AGG	-	chr1.3:71720235-71720254	None:intergenic	45.0%
	TCTTTGTAGACACGGAGAAG+AGG	-	chr1.3:71719914-71719933	None:intergenic	45.0%
!	CTTCCTGCTGCTTATGATGA+TGG	+	chr1.3:71720235-71720254	MS.gene91418:CDS	45.0%
!	GCACTTCTTCGTGTTGGTAA+TGG	+	chr1.3:71720397-71720416	MS.gene91418:CDS	45.0%
!!	CTGCTGCTTATGATGATGGT+TGG	+	chr1.3:71720239-71720258	MS.gene91418:CDS	45.0%
	ATTCCTCTTGATCCAGGGAC+AGG	+	chr1.3:71719977-71719996	MS.gene91418:CDS	50.0%
	CCACCAATTCCTCTTGATCC+AGG	+	chr1.3:71719971-71719990	MS.gene91418:CDS	50.0%
	CCTGGATCAAGAGGAATTGG+TGG	-	chr1.3:71719974-71719993	None:intergenic	50.0%
	GCATCAACAACGCTGAACCA+TGG	+	chr1.3:71720302-71720321	MS.gene91418:CDS	50.0%
	GGCTGTTGATGCTCCTAGTT+TGG	+	chr1.3:71720606-71720625	MS.gene91418:CDS	50.0%
	GTCCCTGGATCAAGAGGAAT+TGG	-	chr1.3:71719977-71719996	None:intergenic	50.0%
	TTGTAGACACGGAGAAGAGG+TGG	-	chr1.3:71719911-71719930	None:intergenic	50.0%
	TTTGATGAGACACCTGTCCC+TGG	-	chr1.3:71719992-71720011	None:intergenic	50.0%
	TTTGTGTACCCTGATGCACC+TGG	+	chr1.3:71720553-71720572	MS.gene91418:CDS	50.0%
!!	CTAGGAGCATCAACAGCCAA+AGG	-	chr1.3:71720604-71720623	None:intergenic	50.0%
	ACACCTGTCCCTGGATCAAG+AGG	-	chr1.3:71719983-71720002	None:intergenic	55.0%
	CAATCCCACCAGGTGCATCA+GGG	-	chr1.3:71720564-71720583	None:intergenic	55.0%
	TCAATCCCACCAGGTGCATC+AGG	-	chr1.3:71720565-71720584	None:intergenic	55.0%
	TGTACCCTGATGCACCTGGT+GGG	+	chr1.3:71720557-71720576	MS.gene91418:CDS	55.0%
	GTGTACCCTGATGCACCTGG+TGG	+	chr1.3:71720556-71720575	MS.gene91418:CDS	60.0%
!!	GCAGCAGGAAGAGGGTGTTC+TGG	-	chr1.3:71720226-71720245	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	71719872	71720846	71719872	ID=MS.gene91418
chr1.3	mRNA	71719872	71720846	71719872	ID=MS.gene91418.t1;Parent=MS.gene91418
chr1.3	exon	71719872	71720846	71719872	ID=MS.gene91418.t1.exon1;Parent=MS.gene91418.t1
chr1.3	CDS	71719872	71720846	71719872	ID=cds.MS.gene91418.t1;Parent=MS.gene91418.t1

Gene Sequence

>MS.gene91418

ATGGCTTCTTTAACCAAAGAAATAGACAGAGAACTTCCACCTCTTCTCCGTGTCTACAAAGATGGAACAGTTGAACGTTTCTTAGGCTCTAAAATCGTACCACCAATTCCTCTTGATCCAGGGACAGGTGTCTCATCAAAAGACATAATCATTTCACAAAACCCATTAATCTCTGCACGTATTCATCTTCCCAAACTCACCAACCAAACTCAAAAGCTTCCAATCTTAGTTTACTATCATGGTGGTGCTTTTTGTCTTGAATCAGCTTTCTCTTTCCTTCACCAACGTTACCTCAATATCATTGCTTCACAAGCAAATGTTCTTGTTGTTTCTGTTGAATATAGACTTGCACCAGAACACCCTCTTCCTGCTGCTTATGATGATGGTTGGTTTTCCCTCAAATGGGTCACTTCTCATTCCATCAACAACAGCATCAACAACGCTGAACCATGGTTAATCAAATACGGTGATTTTGACCGTTTTTACATCGGTGGTGATACTTCAGGTGCAAATATTGCACACAATGCACTTCTTCGTGTTGGTAATGGTGTTGAAACTTTACCTGGTGATGTGAAAATTAGAGGAGCATTAGTTGCTTTTCCTTTGTTTTGGAGTTCGAAGCCGGTTTTGTCAGAATCAGTTGAAGGGCATGAACAAAGTTCACCTATGAAAGTTTGGAATTTTGTGTACCCTGATGCACCTGGTGGGATTGATAACCCTTTGATCAATCCTTTGGCTGTTGATGCTCCTAGTTTGGATATTATTGGTTGTCCTAAGATGTTGATTTTTGTTGCGGGGAATGATGATTTAAGAGACAGAGGGATTTGGTACTATGATGCTGTTAAGAAAAGTGGTTGGAAAGGTGATGTGGAACTTGTTCATGTTGAAGGTGAAGAACATTGTTTTCAGATTTATCATCCTGAAACTCAGAATTCTATTGATATGGTCAAACGTATTGCTTCTTTTCTTGTTTGA

Protein sequence

>MS.gene91418.t1

MASLTKEIDRELPPLLRVYKDGTVERFLGSKIVPPIPLDPGTGVSSKDIIISQNPLISARIHLPKLTNQTQKLPILVYYHGGAFCLESAFSFLHQRYLNIIASQANVLVVSVEYRLAPEHPLPAAYDDGWFSLKWVTSHSINNSINNAEPWLIKYGDFDRFYIGGDTSGANIAHNALLRVGNGVETLPGDVKIRGALVAFPLFWSSKPVLSESVEGHEQSSPMKVWNFVYPDAPGGIDNPLINPLAVDAPSLDIIGCPKMLIFVAGNDDLRDRGIWYYDAVKKSGWKGDVELVHVEGEEHCFQIYHPETQNSIDMVKRIASFLV