Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25827.t1 | XP_003601357.2 | 99.5 | 1108 | 5 | 0 | 1 | 1108 | 1 | 1108 | 0.00E+00 | 2229.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25827.t1 | Q84WU2 | 81.6 | 1108 | 200 | 3 | 1 | 1108 | 1 | 1104 | 0.0e+00 | 1870.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25827.t1 | G7J6M6 | 99.5 | 1108 | 5 | 0 | 1 | 1108 | 1 | 1108 | 0.0e+00 | 2229.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049209 | MS.gene25827 | 0.842306 | 2.80E-58 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25827.t1 | MTR_3g079840 | 99.549 | 1108 | 5 | 0 | 1 | 1108 | 1 | 1108 | 0.0 | 2292 |
MS.gene25827.t1 | MTR_3g079840 | 99.458 | 1108 | 5 | 1 | 1 | 1108 | 1 | 1107 | 0.0 | 2286 |
MS.gene25827.t1 | MTR_5g086700 | 91.472 | 1114 | 87 | 3 | 1 | 1108 | 1 | 1112 | 0.0 | 2083 |
MS.gene25827.t1 | MTR_5g086700 | 91.203 | 1114 | 87 | 4 | 1 | 1108 | 1 | 1109 | 0.0 | 2071 |
MS.gene25827.t1 | MTR_1g041240 | 79.227 | 1112 | 223 | 5 | 1 | 1108 | 1 | 1108 | 0.0 | 1823 |
MS.gene25827.t1 | MTR_1g041240 | 79.137 | 1112 | 223 | 5 | 1 | 1108 | 1 | 1107 | 0.0 | 1821 |
MS.gene25827.t1 | MTR_1g041240 | 79.189 | 1110 | 225 | 5 | 1 | 1108 | 1 | 1106 | 0.0 | 1820 |
MS.gene25827.t1 | MTR_5g091450 | 65.094 | 318 | 106 | 3 | 529 | 843 | 156 | 471 | 1.44e-118 | 385 |
MS.gene25827.t1 | MTR_5g091450 | 68.027 | 147 | 42 | 2 | 35 | 180 | 15 | 157 | 3.13e-59 | 219 |
MS.gene25827.t1 | MTR_5g091550 | 69.888 | 269 | 79 | 2 | 535 | 803 | 147 | 413 | 7.83e-118 | 373 |
MS.gene25827.t1 | MTR_5g091550 | 55.469 | 128 | 57 | 0 | 53 | 180 | 15 | 142 | 1.54e-41 | 160 |
MS.gene25827.t1 | MTR_5g091410 | 65.854 | 287 | 91 | 5 | 539 | 822 | 7 | 289 | 5.87e-117 | 373 |
MS.gene25827.t1 | MTR_5g091550 | 68.613 | 274 | 79 | 3 | 535 | 803 | 147 | 418 | 2.05e-115 | 367 |
MS.gene25827.t1 | MTR_5g091550 | 55.469 | 128 | 57 | 0 | 53 | 180 | 15 | 142 | 1.81e-41 | 160 |
MS.gene25827.t1 | MTR_5g091530 | 61.034 | 290 | 92 | 2 | 529 | 818 | 84 | 352 | 1.42e-107 | 342 |
MS.gene25827.t1 | MTR_5g091530 | 57.471 | 87 | 37 | 0 | 96 | 182 | 1 | 87 | 9.67e-25 | 108 |
MS.gene25827.t1 | MTR_5g091180 | 62.671 | 292 | 94 | 3 | 533 | 822 | 173 | 451 | 1.27e-101 | 337 |
MS.gene25827.t1 | MTR_5g091180 | 58.333 | 144 | 59 | 1 | 38 | 180 | 27 | 170 | 4.59e-47 | 181 |
MS.gene25827.t1 | MTR_5g091430 | 61.832 | 262 | 96 | 2 | 562 | 822 | 2 | 260 | 9.52e-99 | 324 |
MS.gene25827.t1 | MTR_1g042160 | 46.154 | 130 | 68 | 1 | 57 | 184 | 13 | 142 | 4.78e-37 | 142 |
MS.gene25827.t1 | MTR_3g108660 | 34.122 | 296 | 167 | 10 | 200 | 482 | 107 | 387 | 1.86e-29 | 127 |
MS.gene25827.t1 | MTR_3g108660 | 34.122 | 296 | 167 | 10 | 200 | 482 | 107 | 387 | 2.40e-29 | 127 |
MS.gene25827.t1 | MTR_7g107200 | 42.636 | 129 | 71 | 2 | 57 | 182 | 13 | 141 | 6.81e-29 | 120 |
MS.gene25827.t1 | MTR_1g010040 | 31.469 | 286 | 180 | 8 | 200 | 478 | 107 | 383 | 5.04e-27 | 119 |
MS.gene25827.t1 | MTR_1g010040 | 31.469 | 286 | 180 | 8 | 200 | 478 | 107 | 383 | 5.42e-27 | 119 |
MS.gene25827.t1 | MTR_7g107160 | 35.484 | 155 | 87 | 4 | 37 | 180 | 111 | 263 | 1.06e-22 | 103 |
MS.gene25827.t1 | MTR_7g107160 | 39.437 | 71 | 43 | 0 | 114 | 184 | 4 | 74 | 7.48e-13 | 72.4 |
MS.gene25827.t1 | MTR_1g044450 | 40.441 | 136 | 75 | 4 | 49 | 182 | 57 | 188 | 1.29e-22 | 105 |
MS.gene25827.t1 | MTR_8g011730 | 37.956 | 137 | 78 | 4 | 51 | 181 | 6 | 141 | 1.39e-22 | 101 |
MS.gene25827.t1 | MTR_1g073800 | 32.597 | 181 | 99 | 4 | 6 | 182 | 13 | 174 | 2.25e-21 | 99.0 |
MS.gene25827.t1 | MTR_1g073790 | 40.625 | 128 | 70 | 4 | 57 | 182 | 62 | 185 | 3.73e-21 | 100 |
MS.gene25827.t1 | MTR_6g022290 | 25.902 | 305 | 197 | 12 | 200 | 489 | 29 | 319 | 2.85e-20 | 96.7 |
MS.gene25827.t1 | MTR_4g130940 | 25.806 | 341 | 201 | 12 | 200 | 524 | 92 | 396 | 5.83e-20 | 96.7 |
MS.gene25827.t1 | MTR_4g130940 | 25.806 | 341 | 201 | 12 | 200 | 524 | 92 | 396 | 6.94e-20 | 96.3 |
MS.gene25827.t1 | MTR_3g106700 | 36.691 | 139 | 77 | 3 | 57 | 184 | 406 | 544 | 1.93e-19 | 95.5 |
MS.gene25827.t1 | MTR_3g106700 | 33.594 | 128 | 80 | 3 | 60 | 182 | 71 | 198 | 4.55e-19 | 94.4 |
MS.gene25827.t1 | MTR_5g030360 | 25.753 | 299 | 202 | 10 | 200 | 489 | 154 | 441 | 9.12e-19 | 92.4 |
MS.gene25827.t1 | MTR_1g014260 | 24.107 | 336 | 197 | 10 | 198 | 481 | 179 | 508 | 9.49e-18 | 89.0 |
MS.gene25827.t1 | MTR_6g022310 | 25.000 | 304 | 201 | 13 | 200 | 489 | 127 | 417 | 1.14e-17 | 89.0 |
MS.gene25827.t1 | MTR_6g022300 | 24.224 | 322 | 213 | 12 | 200 | 505 | 67 | 373 | 1.90e-17 | 88.2 |
MS.gene25827.t1 | MTR_2g070390 | 25.538 | 325 | 207 | 11 | 189 | 489 | 7 | 320 | 2.56e-17 | 87.8 |
MS.gene25827.t1 | MTR_4g123750 | 30.857 | 175 | 101 | 6 | 33 | 197 | 1 | 165 | 2.22e-16 | 82.0 |
MS.gene25827.t1 | MTR_4g123750 | 33.582 | 134 | 85 | 2 | 57 | 187 | 176 | 308 | 2.42e-15 | 79.0 |
MS.gene25827.t1 | MTR_8g006190 | 34.783 | 115 | 68 | 2 | 75 | 182 | 10 | 124 | 3.57e-16 | 82.8 |
MS.gene25827.t1 | MTR_8g006190 | 32.593 | 135 | 84 | 3 | 58 | 186 | 159 | 292 | 3.12e-14 | 77.0 |
MS.gene25827.t1 | MTR_3g100480 | 24.484 | 339 | 187 | 15 | 201 | 486 | 585 | 907 | 2.59e-15 | 81.6 |
MS.gene25827.t1 | MTR_4g115880 | 23.607 | 377 | 188 | 14 | 198 | 481 | 195 | 564 | 5.27e-15 | 80.1 |
MS.gene25827.t1 | MTR_8g006190 | 32.593 | 135 | 84 | 3 | 58 | 186 | 151 | 284 | 2.42e-14 | 77.0 |
MS.gene25827.t1 | MTR_8g006190 | 34.615 | 104 | 61 | 2 | 86 | 182 | 13 | 116 | 5.20e-13 | 73.2 |
MS.gene25827.t1 | MTR_5g430360 | 26.887 | 212 | 145 | 7 | 280 | 489 | 70 | 273 | 3.67e-14 | 77.0 |
MS.gene25827.t1 | MTR_5g032380 | 25.356 | 351 | 193 | 16 | 201 | 527 | 425 | 730 | 5.37e-13 | 73.9 |
MS.gene25827.t1 | MTR_8g064910 | 23.856 | 306 | 199 | 12 | 200 | 489 | 54 | 341 | 1.64e-12 | 71.2 |
MS.gene25827.t1 | MTR_5g091460 | 67.442 | 43 | 14 | 0 | 562 | 604 | 2 | 44 | 9.99e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25827.t1 | AT5G06600 | 82.432 | 1110 | 188 | 7 | 1 | 1108 | 1 | 1105 | 0.0 | 1890 |
MS.gene25827.t1 | AT3G11910 | 81.679 | 1108 | 199 | 3 | 1 | 1108 | 1 | 1104 | 0.0 | 1889 |
MS.gene25827.t1 | AT3G11910 | 81.679 | 1108 | 199 | 3 | 1 | 1108 | 1 | 1104 | 0.0 | 1889 |
MS.gene25827.t1 | AT3G11910 | 81.588 | 1108 | 199 | 4 | 1 | 1108 | 1 | 1103 | 0.0 | 1883 |
MS.gene25827.t1 | AT3G11910 | 81.588 | 1108 | 199 | 4 | 1 | 1108 | 1 | 1103 | 0.0 | 1883 |
MS.gene25827.t1 | AT5G06600 | 82.342 | 1110 | 188 | 8 | 1 | 1108 | 1 | 1104 | 0.0 | 1882 |
MS.gene25827.t1 | AT5G06600 | 82.877 | 987 | 163 | 6 | 1 | 985 | 1 | 983 | 0.0 | 1689 |
MS.gene25827.t1 | AT3G58250 | 43.713 | 167 | 87 | 3 | 55 | 216 | 8 | 172 | 9.71e-36 | 139 |
MS.gene25827.t1 | AT3G58270 | 45.385 | 130 | 71 | 0 | 57 | 186 | 8 | 137 | 3.80e-32 | 129 |
MS.gene25827.t1 | AT3G58270 | 45.385 | 130 | 71 | 0 | 57 | 186 | 8 | 137 | 3.80e-32 | 129 |
MS.gene25827.t1 | AT3G58270 | 45.385 | 130 | 71 | 0 | 57 | 186 | 8 | 137 | 3.80e-32 | 129 |
MS.gene25827.t1 | AT3G58340 | 45.161 | 124 | 68 | 0 | 57 | 180 | 8 | 131 | 2.10e-31 | 126 |
MS.gene25827.t1 | AT3G58340 | 45.161 | 124 | 68 | 0 | 57 | 180 | 8 | 131 | 2.64e-31 | 126 |
MS.gene25827.t1 | AT3G58410 | 44.286 | 140 | 75 | 1 | 57 | 196 | 8 | 144 | 1.17e-30 | 124 |
MS.gene25827.t1 | AT3G58360 | 42.361 | 144 | 81 | 1 | 57 | 200 | 8 | 149 | 2.00e-30 | 122 |
MS.gene25827.t1 | AT3G58370 | 48.031 | 127 | 63 | 2 | 57 | 180 | 9 | 135 | 4.29e-30 | 122 |
MS.gene25827.t1 | AT3G58210 | 43.182 | 132 | 73 | 1 | 57 | 186 | 8 | 139 | 3.13e-29 | 120 |
MS.gene25827.t1 | AT3G49600 | 29.805 | 359 | 210 | 12 | 196 | 527 | 102 | 445 | 9.19e-29 | 125 |
MS.gene25827.t1 | AT3G49600 | 29.805 | 359 | 210 | 12 | 196 | 527 | 102 | 445 | 9.19e-29 | 125 |
MS.gene25827.t1 | AT3G49600 | 31.894 | 301 | 185 | 10 | 196 | 488 | 102 | 390 | 2.98e-28 | 123 |
MS.gene25827.t1 | AT3G58410 | 42.143 | 140 | 64 | 1 | 57 | 196 | 29 | 151 | 9.22e-27 | 113 |
MS.gene25827.t1 | AT2G05410 | 40.690 | 145 | 81 | 3 | 56 | 198 | 7 | 148 | 1.79e-26 | 111 |
MS.gene25827.t1 | AT3G58350 | 39.098 | 133 | 78 | 2 | 57 | 186 | 8 | 140 | 8.65e-26 | 109 |
MS.gene25827.t1 | AT3G58350 | 39.098 | 133 | 78 | 2 | 57 | 186 | 8 | 140 | 8.65e-26 | 109 |
MS.gene25827.t1 | AT3G27040 | 39.695 | 131 | 78 | 1 | 57 | 186 | 9 | 139 | 8.80e-26 | 108 |
MS.gene25827.t1 | AT3G58260 | 31.915 | 235 | 116 | 8 | 58 | 256 | 9 | 235 | 3.90e-25 | 108 |
MS.gene25827.t1 | AT2G05420 | 38.686 | 137 | 75 | 2 | 58 | 186 | 10 | 145 | 6.45e-25 | 107 |
MS.gene25827.t1 | AT2G01790 | 38.462 | 130 | 77 | 1 | 60 | 186 | 11 | 140 | 9.59e-23 | 99.8 |
MS.gene25827.t1 | AT3G58200 | 36.842 | 114 | 71 | 1 | 57 | 169 | 8 | 121 | 1.46e-22 | 100 |
MS.gene25827.t1 | AT1G31390 | 37.600 | 125 | 75 | 1 | 50 | 171 | 1 | 125 | 2.08e-21 | 95.9 |
MS.gene25827.t1 | AT3G58290 | 34.266 | 143 | 82 | 3 | 49 | 180 | 3 | 144 | 1.36e-20 | 94.0 |
MS.gene25827.t1 | AT3G44790 | 37.405 | 131 | 77 | 2 | 57 | 186 | 5 | 131 | 3.42e-20 | 93.6 |
MS.gene25827.t1 | AT2G22310 | 26.101 | 318 | 186 | 8 | 199 | 477 | 22 | 329 | 4.26e-20 | 94.0 |
MS.gene25827.t1 | AT1G31400 | 36.429 | 140 | 83 | 3 | 50 | 186 | 1 | 137 | 5.93e-20 | 92.0 |
MS.gene25827.t1 | AT3G44800 | 34.507 | 142 | 90 | 2 | 57 | 197 | 5 | 144 | 1.42e-19 | 92.0 |
MS.gene25827.t1 | AT5G43560 | 32.020 | 203 | 110 | 8 | 9 | 187 | 1 | 199 | 4.30e-19 | 94.0 |
MS.gene25827.t1 | AT5G43560 | 32.020 | 203 | 110 | 8 | 9 | 187 | 1 | 199 | 4.30e-19 | 94.0 |
MS.gene25827.t1 | AT1G04300 | 38.971 | 136 | 72 | 6 | 57 | 187 | 69 | 198 | 4.81e-19 | 94.0 |
MS.gene25827.t1 | AT2G25320 | 34.091 | 132 | 74 | 4 | 60 | 182 | 75 | 202 | 6.69e-19 | 93.6 |
MS.gene25827.t1 | AT2G25320 | 36.691 | 139 | 76 | 4 | 57 | 184 | 404 | 541 | 7.92e-19 | 93.6 |
MS.gene25827.t1 | AT2G25320 | 34.091 | 132 | 74 | 4 | 60 | 182 | 76 | 203 | 6.74e-19 | 93.6 |
MS.gene25827.t1 | AT2G25320 | 36.691 | 139 | 76 | 4 | 57 | 184 | 405 | 542 | 8.06e-19 | 93.6 |
MS.gene25827.t1 | AT3G58400 | 40.909 | 110 | 63 | 2 | 78 | 186 | 24 | 132 | 8.18e-19 | 89.0 |
MS.gene25827.t1 | AT2G25320 | 34.091 | 132 | 74 | 4 | 60 | 182 | 76 | 203 | 9.21e-19 | 93.2 |
MS.gene25827.t1 | AT2G25320 | 36.691 | 139 | 76 | 4 | 57 | 184 | 405 | 542 | 1.61e-18 | 92.4 |
MS.gene25827.t1 | AT5G52330 | 35.065 | 154 | 86 | 7 | 59 | 204 | 22 | 169 | 2.03e-18 | 89.4 |
MS.gene25827.t1 | AT5G52330 | 35.065 | 154 | 86 | 7 | 59 | 204 | 22 | 169 | 2.03e-18 | 89.4 |
MS.gene25827.t1 | AT5G52330 | 35.065 | 154 | 86 | 7 | 59 | 204 | 22 | 169 | 2.03e-18 | 89.4 |
MS.gene25827.t1 | AT3G17380 | 34.028 | 144 | 88 | 2 | 48 | 184 | 12 | 155 | 2.53e-18 | 87.8 |
MS.gene25827.t1 | AT3G17380 | 25.714 | 140 | 100 | 2 | 50 | 186 | 168 | 306 | 1.29e-12 | 70.5 |
MS.gene25827.t1 | AT2G32880 | 32.335 | 167 | 97 | 7 | 35 | 188 | 154 | 317 | 1.98e-17 | 85.1 |
MS.gene25827.t1 | AT2G25330 | 29.167 | 168 | 105 | 6 | 25 | 182 | 14 | 177 | 2.28e-17 | 87.8 |
MS.gene25827.t1 | AT2G25330 | 35.252 | 139 | 79 | 3 | 57 | 184 | 359 | 497 | 2.00e-14 | 78.6 |
MS.gene25827.t1 | AT3G58440 | 41.085 | 129 | 72 | 4 | 55 | 182 | 8 | 133 | 2.39e-17 | 87.8 |
MS.gene25827.t1 | AT1G04300 | 36.806 | 144 | 72 | 7 | 57 | 187 | 69 | 206 | 3.07e-17 | 88.2 |
MS.gene25827.t1 | AT3G58220 | 30.370 | 135 | 87 | 4 | 55 | 185 | 10 | 141 | 7.19e-17 | 84.0 |
MS.gene25827.t1 | AT4G09780 | 36.567 | 134 | 81 | 4 | 52 | 182 | 209 | 341 | 7.78e-17 | 84.7 |
MS.gene25827.t1 | AT3G58220 | 31.159 | 138 | 82 | 5 | 55 | 185 | 10 | 141 | 9.74e-17 | 82.0 |
MS.gene25827.t1 | AT3G58220 | 31.159 | 138 | 82 | 5 | 55 | 185 | 10 | 141 | 1.42e-16 | 84.3 |
MS.gene25827.t1 | AT3G58220 | 31.159 | 138 | 82 | 5 | 55 | 185 | 10 | 141 | 2.38e-16 | 82.8 |
MS.gene25827.t1 | AT3G14400 | 25.240 | 313 | 201 | 11 | 200 | 489 | 24 | 326 | 2.59e-16 | 84.3 |
MS.gene25827.t1 | AT3G58220 | 31.159 | 138 | 82 | 5 | 55 | 185 | 10 | 141 | 2.94e-16 | 81.6 |
MS.gene25827.t1 | AT3G58240 | 31.343 | 134 | 90 | 2 | 50 | 182 | 1 | 133 | 8.55e-16 | 80.5 |
MS.gene25827.t1 | AT2G32870 | 32.121 | 165 | 99 | 6 | 35 | 188 | 253 | 415 | 1.23e-15 | 81.3 |
MS.gene25827.t1 | AT1G04300 | 41.525 | 118 | 58 | 6 | 75 | 187 | 68 | 179 | 1.75e-15 | 82.4 |
MS.gene25827.t1 | AT4G09780 | 33.333 | 144 | 83 | 4 | 52 | 182 | 209 | 352 | 2.56e-15 | 80.1 |
MS.gene25827.t1 | AT2G22310 | 24.308 | 325 | 195 | 10 | 211 | 495 | 1 | 314 | 6.06e-15 | 78.2 |
MS.gene25827.t1 | AT2G42460 | 36.842 | 133 | 80 | 3 | 55 | 186 | 7 | 136 | 6.30e-15 | 77.4 |
MS.gene25827.t1 | AT4G09770 | 34.586 | 133 | 83 | 4 | 52 | 181 | 155 | 286 | 6.98e-15 | 77.4 |
MS.gene25827.t1 | AT4G09770 | 34.586 | 133 | 83 | 4 | 52 | 181 | 155 | 286 | 6.98e-15 | 77.4 |
MS.gene25827.t1 | AT4G09770 | 34.586 | 133 | 83 | 4 | 52 | 181 | 181 | 312 | 9.54e-15 | 77.4 |
MS.gene25827.t1 | AT2G22310 | 26.168 | 214 | 137 | 6 | 292 | 495 | 107 | 309 | 1.02e-14 | 77.4 |
MS.gene25827.t1 | AT3G29580 | 34.328 | 134 | 81 | 4 | 57 | 187 | 8 | 137 | 2.66e-14 | 75.5 |
MS.gene25827.t1 | AT4G17895 | 24.606 | 317 | 185 | 13 | 200 | 488 | 176 | 466 | 4.26e-14 | 77.4 |
MS.gene25827.t1 | AT2G05410 | 38.053 | 113 | 65 | 3 | 88 | 198 | 1 | 110 | 8.69e-14 | 73.2 |
MS.gene25827.t1 | AT5G26280 | 31.304 | 115 | 74 | 2 | 75 | 184 | 81 | 195 | 6.29e-13 | 72.0 |
MS.gene25827.t1 | AT4G31670 | 26.019 | 319 | 193 | 16 | 184 | 477 | 153 | 453 | 7.04e-13 | 73.6 |
MS.gene25827.t1 | AT3G58280 | 31.655 | 139 | 89 | 3 | 58 | 196 | 12 | 144 | 7.13e-13 | 71.2 |
MS.gene25827.t1 | AT3G58380 | 28.261 | 138 | 98 | 1 | 57 | 193 | 8 | 145 | 7.22e-13 | 71.2 |
MS.gene25827.t1 | AT5G26320 | 31.304 | 115 | 72 | 2 | 75 | 182 | 81 | 195 | 8.85e-13 | 71.6 |
MS.gene25827.t1 | AT2G42475 | 35.772 | 123 | 74 | 4 | 55 | 176 | 6 | 124 | 1.74e-12 | 70.9 |
MS.gene25827.t1 | AT3G58430 | 35.417 | 96 | 58 | 3 | 57 | 152 | 8 | 99 | 2.15e-12 | 70.1 |
MS.gene25827.t1 | AT5G26280 | 31.304 | 115 | 74 | 2 | 75 | 184 | 100 | 214 | 3.74e-12 | 69.7 |
MS.gene25827.t1 | AT3G58430 | 35.417 | 96 | 58 | 3 | 57 | 152 | 8 | 99 | 3.83e-12 | 70.5 |
MS.gene25827.t1 | AT5G26260 | 30.973 | 113 | 73 | 2 | 75 | 182 | 82 | 194 | 4.53e-12 | 69.3 |
MS.gene25827.t1 | AT3G20360 | 31.852 | 135 | 82 | 5 | 54 | 180 | 220 | 352 | 6.25e-12 | 69.3 |
MS.gene25827.t1 | AT4G01390 | 31.847 | 157 | 97 | 6 | 38 | 188 | 147 | 299 | 1.41e-11 | 67.4 |
Find 234 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATATAAGCATTTGAATATT+TGG | 0.118695 | 3.2:-70182651 | None:intergenic |
TCCACAGTATTGGCAGTTTC+AGG | 0.142941 | 3.2:-70175334 | None:intergenic |
AAGACATTGCTGAACATTTA+AGG | 0.159237 | 3.2:+70182729 | MS.gene25827:CDS |
TTCTCACAGTGAACTTATTA+TGG | 0.191138 | 3.2:-70175722 | None:intergenic |
TTCGTAAGATTGTTGATTAC+TGG | 0.210928 | 3.2:+70176329 | MS.gene25827:CDS |
GGACTATTTGTCCATGTATT+TGG | 0.214565 | 3.2:+70175623 | MS.gene25827:CDS |
GAGCAGTGTCTTTAGTAAAA+TGG | 0.246750 | 3.2:-70188674 | None:intergenic |
GTTCTTACCTTCCTAAAATA+AGG | 0.248470 | 3.2:-70176448 | None:intergenic |
TGCAGCAAATTCAAAACTTT+GGG | 0.248752 | 3.2:+70188816 | MS.gene25827:intron |
GTGAGGGGTAAGACGTATTT+TGG | 0.250048 | 3.2:-70187315 | None:intergenic |
GATACCTTGAAAACATTAAA+AGG | 0.265525 | 3.2:-70183359 | None:intergenic |
TAGTCCACATTGTTTCCTTT+TGG | 0.279597 | 3.2:-70175606 | None:intergenic |
GAATATTTGGTGAATTTAAA+TGG | 0.286083 | 3.2:-70182638 | None:intergenic |
CAGTTCAATTCCAGCGCTTT+TGG | 0.287289 | 3.2:+70183828 | MS.gene25827:CDS |
TGATAGAGGCGGGATGTTTA+TGG | 0.300514 | 3.2:+70189261 | MS.gene25827:intron |
GTCAATTCTCCATGTGAATC+TGG | 0.304384 | 3.2:-70175386 | None:intergenic |
TCCACCCCTCGGTGCTTAAT+AGG | 0.305481 | 3.2:-70187368 | None:intergenic |
TGCTTAATAGGCTGGGGTTT+CGG | 0.306936 | 3.2:-70187356 | None:intergenic |
TCGTTGTTGGTGCTTATAAA+TGG | 0.309166 | 3.2:+70175452 | MS.gene25827:CDS |
TTCGTGTATAACCAAGAAAA+AGG | 0.310167 | 3.2:-70188843 | None:intergenic |
CCTTCCTAAAATAAGGAATA+TGG | 0.320229 | 3.2:-70176441 | None:intergenic |
AAGGAGCTGACAAAATCTTT+TGG | 0.322976 | 3.2:+70176656 | MS.gene25827:CDS |
CGCAGAACAGTATGGTTTGC+AGG | 0.329635 | 3.2:+70177139 | MS.gene25827:CDS |
TCTAAATATGAGGGCACATC+TGG | 0.330570 | 3.2:-70186817 | None:intergenic |
GTCTATTAGGCCGATAAGTA+TGG | 0.334381 | 3.2:-70183871 | None:intergenic |
CCATCTTTATACAATTATAA+AGG | 0.334445 | 3.2:+70183116 | MS.gene25827:CDS |
CCTTGTAATGGCAGCTTTGT+TGG | 0.336800 | 3.2:+70184658 | MS.gene25827:intron |
CTCCAACAGTGCTCTGCTTT+GGG | 0.338970 | 3.2:-70187709 | None:intergenic |
CAGGAGGAAAATCAATAAAT+AGG | 0.339583 | 3.2:-70177800 | None:intergenic |
GGCGGGATGTTTATGGTGCT+TGG | 0.350465 | 3.2:+70189268 | MS.gene25827:CDS |
TTGCAGCAAATTCAAAACTT+TGG | 0.351913 | 3.2:+70188815 | MS.gene25827:intron |
CCCCTCGGTGCTTAATAGGC+TGG | 0.354046 | 3.2:-70187364 | None:intergenic |
ATGATGTTCAAGAACTAAAT+CGG | 0.357406 | 3.2:+70176708 | MS.gene25827:CDS |
AAGTAGAGAATTCATATAAC+AGG | 0.362495 | 3.2:-70176407 | None:intergenic |
CCCTCGGTGCTTAATAGGCT+GGG | 0.365486 | 3.2:-70187363 | None:intergenic |
TTCACATCTTTCATGCCTCT+TGG | 0.368153 | 3.2:+70176238 | MS.gene25827:CDS |
CATACTCACCTCGTCCTTGA+TGG | 0.372078 | 3.2:-70187586 | None:intergenic |
CAACGCTGGTGTCACTATAT+TGG | 0.372989 | 3.2:-70176628 | None:intergenic |
AATGTTACTTTCTTATCAAT+AGG | 0.373075 | 3.2:-70186098 | None:intergenic |
TCTCCAACAGTGCTCTGCTT+TGG | 0.373908 | 3.2:-70187710 | None:intergenic |
GAAGAGGTTGCAAAAGAGTT+TGG | 0.376739 | 3.2:+70183800 | MS.gene25827:CDS |
CAAAGAAAAGTCATCTTCCT+TGG | 0.384209 | 3.2:-70187094 | None:intergenic |
AATCTGGTTTGCGGAGGATC+CGG | 0.385298 | 3.2:-70175370 | None:intergenic |
TAAAGTACAATATCTTCTTC+AGG | 0.386121 | 3.2:-70184754 | None:intergenic |
AAAATATTAATGATCAATAC+TGG | 0.389281 | 3.2:+70188395 | MS.gene25827:CDS |
GGTGCTTGGGAGCAATATCT+TGG | 0.396008 | 3.2:+70189282 | MS.gene25827:CDS |
ATAGGTTCGCACATGACATT+TGG | 0.399419 | 3.2:-70186080 | None:intergenic |
CTTAACAAGGCTAAATGAAA+TGG | 0.399646 | 3.2:+70184720 | MS.gene25827:CDS |
AGACATTGCTGAACATTTAA+GGG | 0.401984 | 3.2:+70182730 | MS.gene25827:CDS |
ATATCGTCCTTTGTCTTGTC+AGG | 0.405612 | 3.2:-70184523 | None:intergenic |
CCTTTATAATTGTATAAAGA+TGG | 0.407160 | 3.2:-70183116 | None:intergenic |
CAGTTACCGCAAACAAATCC+TGG | 0.408672 | 3.2:+70182602 | MS.gene25827:intron |
GTCTTGTCAGGTGGTGCAAT+GGG | 0.409536 | 3.2:-70184511 | None:intergenic |
TATTCAGAAGTATTCGTTGT+TGG | 0.409957 | 3.2:+70175439 | MS.gene25827:CDS |
ATGTGTGTCAGCGGTCTATT+AGG | 0.411438 | 3.2:-70183884 | None:intergenic |
AGCGTCAAAACCATACTTAT+CGG | 0.416131 | 3.2:+70183861 | MS.gene25827:CDS |
CTCATCCTGATGCTGAGTTA+AGG | 0.417631 | 3.2:+70188075 | MS.gene25827:CDS |
TTAATGCACGAGAAAGTGAT+TGG | 0.419514 | 3.2:+70176212 | MS.gene25827:CDS |
GGCTGATGATTGTTGTTCTC+AGG | 0.422720 | 3.2:-70174465 | None:intergenic |
TATGCGGGATACCATGGTTA+AGG | 0.425295 | 3.2:+70177860 | MS.gene25827:CDS |
ATGAACATATTCTAAATATG+AGG | 0.425296 | 3.2:-70186827 | None:intergenic |
CTTGATCTTGATCGCGAGAA+TGG | 0.427172 | 3.2:+70178818 | MS.gene25827:CDS |
CTCCCAAAGCAGAGCACTGT+TGG | 0.429143 | 3.2:+70187707 | MS.gene25827:CDS |
CAGCTCCTTTGTTGCAACGC+TGG | 0.440851 | 3.2:-70176642 | None:intergenic |
GCGGGATGTTTATGGTGCTT+GGG | 0.446615 | 3.2:+70189269 | MS.gene25827:CDS |
TAATGCACGAGAAAGTGATT+GGG | 0.454345 | 3.2:+70176213 | MS.gene25827:CDS |
CGGACACTCCTGTCAGCATC+AGG | 0.456520 | 3.2:-70178854 | None:intergenic |
CGGGCACTAGAGGAGCAATA+TGG | 0.463944 | 3.2:+70182485 | MS.gene25827:CDS |
AAGAAGGAGACCGGCTATGT+TGG | 0.465782 | 3.2:+70176364 | MS.gene25827:CDS |
CAAAAGCGCTGGAATTGAAC+TGG | 0.466040 | 3.2:-70183827 | None:intergenic |
AGCAACCTTAACTCAGCATC+AGG | 0.466091 | 3.2:-70188080 | None:intergenic |
TTGTTCCTCATTATCTGCTA+AGG | 0.468454 | 3.2:-70186785 | None:intergenic |
AAATATCACGCAGAACAGTA+TGG | 0.474338 | 3.2:+70177131 | MS.gene25827:CDS |
ACTATACAAAAGCTATTTGA+AGG | 0.476719 | 3.2:+70176871 | MS.gene25827:CDS |
AGAAGGAGACCGGCTATGTT+GGG | 0.478304 | 3.2:+70176365 | MS.gene25827:CDS |
ATCGTTTCAGGATGCTAAGA+AGG | 0.480079 | 3.2:+70177773 | MS.gene25827:intron |
GTAATGGCAGCTTTGTTGGA+AGG | 0.480719 | 3.2:+70184662 | MS.gene25827:intron |
CTCCATGTGAATCTGGTTTG+CGG | 0.480742 | 3.2:-70175379 | None:intergenic |
AATAAGTTCACTGTGAGAAA+AGG | 0.482487 | 3.2:+70175726 | MS.gene25827:CDS |
AAAGAAAAGTCATCTTCCTT+GGG | 0.482900 | 3.2:-70187093 | None:intergenic |
AAGCCTTGTAATTCGGGTAG+AGG | 0.483415 | 3.2:-70187534 | None:intergenic |
CGAAGACATTGAAGGGCAGA+TGG | 0.485813 | 3.2:+70183268 | MS.gene25827:CDS |
TGCATTTCATCATGCCATCA+AGG | 0.488694 | 3.2:+70187572 | MS.gene25827:CDS |
TGCACTCTATGTAGTTCATA+TGG | 0.489986 | 3.2:-70176897 | None:intergenic |
ATCTATCACCTGATGCTGAC+AGG | 0.494138 | 3.2:+70178846 | MS.gene25827:CDS |
CTTTATAATTGTATAAAGAT+GGG | 0.495649 | 3.2:-70183115 | None:intergenic |
AGTAACATTTCGAGCAAGCC+AGG | 0.497242 | 3.2:+70186112 | MS.gene25827:CDS |
TTGAACCCAGGATTTGTTTG+CGG | 0.497462 | 3.2:-70182608 | None:intergenic |
AGGGAAAGACGTACGTCAAT+GGG | 0.497523 | 3.2:-70174182 | None:intergenic |
TATGCTAGTTCATTACAATC+AGG | 0.498198 | 3.2:+70187403 | MS.gene25827:CDS |
AGACACTGCTCAAAATCAAA+TGG | 0.498518 | 3.2:+70188686 | MS.gene25827:CDS |
CAACTAGTTTGCCCTATGGT+TGG | 0.500101 | 3.2:+70175658 | MS.gene25827:CDS |
ATCTGGTTTGCGGAGGATCC+GGG | 0.500281 | 3.2:-70175369 | None:intergenic |
TGTTAGGGAACCGTTGTTGA+GGG | 0.500290 | 3.2:+70176847 | MS.gene25827:intron |
GTTGAGAGTAGCAGTTGTGA+GGG | 0.501015 | 3.2:-70187331 | None:intergenic |
ATTTGGTGAATTTAAATGGT+GGG | 0.501403 | 3.2:-70182634 | None:intergenic |
GTTGAAGTTGAACGTCTTGA+GGG | 0.502264 | 3.2:+70177101 | MS.gene25827:CDS |
ATTCCTCTACCCGAATTACA+AGG | 0.502399 | 3.2:+70187531 | MS.gene25827:CDS |
GCCCTCGGGAAGCATCCCTT+TGG | 0.502495 | 3.2:+70176580 | MS.gene25827:CDS |
TAGGGAAAGACGTACGTCAA+TGG | 0.504396 | 3.2:-70174183 | None:intergenic |
AGTAGCTCAACAACTTGGCT+TGG | 0.505998 | 3.2:+70187283 | MS.gene25827:CDS |
GTTTGCGGAGGATCCGGGAC+AGG | 0.506027 | 3.2:-70175364 | None:intergenic |
GCAATATGGTGGCGAGGAAG+AGG | 0.507305 | 3.2:+70182499 | MS.gene25827:CDS |
GCGGAGGATCCGGGACAGGC+TGG | 0.507467 | 3.2:-70175360 | None:intergenic |
TGGGCGTCCAGAGTACCTTC+AGG | 0.510665 | 3.2:+70189110 | MS.gene25827:CDS |
TGTTGAAGTTGAACGTCTTG+AGG | 0.511531 | 3.2:+70177100 | MS.gene25827:CDS |
TGTCTTGTCAGGTGGTGCAA+TGG | 0.515758 | 3.2:-70184512 | None:intergenic |
AAAACTTGAAGACAAAATGA+AGG | 0.518002 | 3.2:+70176742 | MS.gene25827:CDS |
CTTTATTTGTAGCTGGAGGA+TGG | 0.519121 | 3.2:+70186736 | MS.gene25827:intron |
GTTCTTGAGCCCAACATAGC+CGG | 0.520751 | 3.2:-70176374 | None:intergenic |
AGGCTCTTTGTGAAGTGTAC+TGG | 0.522321 | 3.2:+70184682 | MS.gene25827:CDS |
TGTGGAGAGCCAGCCTGTCC+CGG | 0.522968 | 3.2:+70175351 | MS.gene25827:CDS |
TTGGGAGCAATATCTTGGCT+TGG | 0.523520 | 3.2:+70189287 | MS.gene25827:CDS |
TCTGAATCCTGAAGGTACTC+TGG | 0.524862 | 3.2:-70189117 | None:intergenic |
ACCTTGCTAAACTCTTCGTC+AGG | 0.527457 | 3.2:-70188917 | None:intergenic |
AACTGAAAATGATATGCCCT+CGG | 0.527473 | 3.2:+70176565 | MS.gene25827:CDS |
GCCTATTAAGCACCGAGGGG+TGG | 0.527546 | 3.2:+70187367 | MS.gene25827:CDS |
TTAATGCACCTGAAAACGAC+TGG | 0.527707 | 3.2:-70189148 | None:intergenic |
GATTCAACTAGTTTGCCCTA+TGG | 0.528288 | 3.2:+70175654 | MS.gene25827:CDS |
TCATATAACAGGTAGCTCCT+TGG | 0.529531 | 3.2:-70176396 | None:intergenic |
GGACTACAAATCAACTAGAA+AGG | 0.530228 | 3.2:+70176927 | MS.gene25827:CDS |
TAGATATGCACAGTTTAGCT+TGG | 0.532424 | 3.2:+70175683 | MS.gene25827:CDS |
CCTCGGTGCTTAATAGGCTG+GGG | 0.533145 | 3.2:-70187362 | None:intergenic |
AGGCTGGCTCTCCACAGTAT+TGG | 0.534404 | 3.2:-70175344 | None:intergenic |
ACAAGGCTAAATGAAATGGC+TGG | 0.534689 | 3.2:+70184724 | MS.gene25827:CDS |
GAACAACAATCATCAGCCTA+TGG | 0.534705 | 3.2:+70174470 | MS.gene25827:CDS |
TGTTCCTCATTATCTGCTAA+GGG | 0.536450 | 3.2:-70186784 | None:intergenic |
AGCCAAAGGGATGCTTCCCG+AGG | 0.537626 | 3.2:-70176582 | None:intergenic |
AGCTCCCTTAGCAGATAATG+AGG | 0.538428 | 3.2:+70186780 | MS.gene25827:CDS |
ATAAACTTTGCAGAGCCAAA+GGG | 0.539109 | 3.2:-70176595 | None:intergenic |
GATTTGAATATGACTTTATG+CGG | 0.540121 | 3.2:+70177844 | MS.gene25827:CDS |
AATAAACTTTGCAGAGCCAA+AGG | 0.540580 | 3.2:-70176596 | None:intergenic |
ATATTCAAATGCTTATATGC+TGG | 0.540800 | 3.2:+70182655 | MS.gene25827:CDS |
TGATGTTCAAGAACTAAATC+GGG | 0.541128 | 3.2:+70176709 | MS.gene25827:CDS |
TTGAGCTGAAGCTGAAGGAC+AGG | 0.547031 | 3.2:-70177819 | None:intergenic |
AGCCTTGTTAAGATTTCTGA+TGG | 0.547367 | 3.2:-70184709 | None:intergenic |
CACGAGACGAAGACATTGAA+GGG | 0.548301 | 3.2:+70183261 | MS.gene25827:CDS |
TGTTGAGAGTAGCAGTTGTG+AGG | 0.549030 | 3.2:-70187332 | None:intergenic |
GCAATCTTTACACACTTCAC+AGG | 0.549662 | 3.2:+70178876 | MS.gene25827:CDS |
ATTGTAATGAACTAGCATAT+CGG | 0.549771 | 3.2:-70187399 | None:intergenic |
GACCTTCAGCTTGATGTCAA+AGG | 0.551211 | 3.2:+70177044 | MS.gene25827:intron |
TAGCCCATAGCCAAAAGCGC+TGG | 0.551602 | 3.2:-70183838 | None:intergenic |
TTGAAGTTGAACGTCTTGAG+GGG | 0.551775 | 3.2:+70177102 | MS.gene25827:CDS |
CGCTAGAAATATCACGAACC+TGG | 0.552009 | 3.2:-70189350 | None:intergenic |
GAGAGAGTAGCTCAACAACT+TGG | 0.553785 | 3.2:+70187278 | MS.gene25827:CDS |
CCCAGCCTATTAAGCACCGA+GGG | 0.556239 | 3.2:+70187363 | MS.gene25827:CDS |
TTTGGAAGTGGAGAAGGGGA+TGG | 0.557355 | 3.2:+70184389 | MS.gene25827:CDS |
AGAATATGTTCATAACCGCC+AGG | 0.558396 | 3.2:+70186837 | MS.gene25827:CDS |
CTGGACATTGCGAGCAGAGG+AGG | 0.558534 | 3.2:+70188414 | MS.gene25827:CDS |
TGACACCAGCGTTGCAACAA+AGG | 0.558749 | 3.2:+70176637 | MS.gene25827:CDS |
CTGGAATTATGACTCAAAGA+AGG | 0.561861 | 3.2:+70176348 | MS.gene25827:CDS |
TTGTTAGGGAACCGTTGTTG+AGG | 0.561880 | 3.2:+70176846 | MS.gene25827:intron |
AGACAATAAGCGGGCACTAG+AGG | 0.562767 | 3.2:+70182475 | MS.gene25827:CDS |
ATTTGAATATGACTTTATGC+GGG | 0.568372 | 3.2:+70177845 | MS.gene25827:CDS |
TATGACTCAAAGAAGGAGAC+CGG | 0.568428 | 3.2:+70176355 | MS.gene25827:CDS |
GTCCATGTATTTGGATGTCG+CGG | 0.569502 | 3.2:+70175632 | MS.gene25827:CDS |
ATCCGCGACATCCAAATACA+TGG | 0.572286 | 3.2:-70175634 | None:intergenic |
GCACGAGACGAAGACATTGA+AGG | 0.572305 | 3.2:+70183260 | MS.gene25827:CDS |
AAACAATAACTACCTTCCAT+AGG | 0.573512 | 3.2:-70174486 | None:intergenic |
TTCACGAGATACCCTCTACT+AGG | 0.575163 | 3.2:-70176274 | None:intergenic |
AAGACGTACGTCAATGGGAG+CGG | 0.575684 | 3.2:-70174177 | None:intergenic |
CTTTAGTAAAATGGTACACG+TGG | 0.580014 | 3.2:-70188665 | None:intergenic |
AGCGGACATCATGACGGTCA+TGG | 0.581148 | 3.2:-70174159 | None:intergenic |
AAGATCATATGCTGTCAACC+AGG | 0.581937 | 3.2:+70189332 | MS.gene25827:CDS |
CATTGAAGGGCAGATGGGAA+AGG | 0.581952 | 3.2:+70183274 | MS.gene25827:CDS |
TGACTTTATGCGGGATACCA+TGG | 0.582109 | 3.2:+70177854 | MS.gene25827:CDS |
CTTCTATCACAAGATATACA+AGG | 0.582632 | 3.2:+70188109 | MS.gene25827:CDS |
GCATATCTACTCCAACCATA+GGG | 0.583649 | 3.2:-70175669 | None:intergenic |
AATGGTGGGTTATTGAACCC+AGG | 0.586697 | 3.2:-70182620 | None:intergenic |
TCGTCCTTTGTCTTGTCAGG+TGG | 0.588301 | 3.2:-70184520 | None:intergenic |
AACAATCATCAGCCTATGGA+AGG | 0.590407 | 3.2:+70174474 | MS.gene25827:CDS |
ATCGTTTGAGCTGAAGCTGA+AGG | 0.592410 | 3.2:-70177824 | None:intergenic |
TGCATATCTACTCCAACCAT+AGG | 0.593467 | 3.2:-70175670 | None:intergenic |
AACTTCAACATACTTGTCAA+AGG | 0.594147 | 3.2:-70177087 | None:intergenic |
TACTCTAATAATTGAAGCTG+AGG | 0.596938 | 3.2:+70176300 | MS.gene25827:CDS |
AATGCACGAGAAAGTGATTG+GGG | 0.600901 | 3.2:+70176214 | MS.gene25827:CDS |
GAAGACATTGAAGGGCAGAT+GGG | 0.601418 | 3.2:+70183269 | MS.gene25827:CDS |
AGCTGAAGCTGAAGGACAGG+AGG | 0.602239 | 3.2:-70177816 | None:intergenic |
CGATCAAGATCAAGTTGTGA+GGG | 0.602258 | 3.2:-70178809 | None:intergenic |
TTTGTTTGTGTAGCAGCAAG+AGG | 0.602726 | 3.2:+70174410 | MS.gene25827:intron |
TCGATCATTGGACAGACCCA+AGG | 0.604925 | 3.2:+70187077 | MS.gene25827:CDS |
ATACAATGTCTGAATCCTGA+AGG | 0.606678 | 3.2:-70189125 | None:intergenic |
AGCCTTTGACATCAAGCTGA+AGG | 0.606950 | 3.2:-70177046 | None:intergenic |
ACTGAAAATGATATGCCCTC+GGG | 0.609024 | 3.2:+70176566 | MS.gene25827:CDS |
TTGAGAGTAGCAGTTGTGAG+GGG | 0.609050 | 3.2:-70187330 | None:intergenic |
CTCCGCAAACCAGATTCACA+TGG | 0.611424 | 3.2:+70175377 | MS.gene25827:CDS |
TGAACATATTCTAAATATGA+GGG | 0.614324 | 3.2:-70186826 | None:intergenic |
GAATTGTATGATCCTAGTAG+AGG | 0.616256 | 3.2:+70176262 | MS.gene25827:CDS |
TCATCATGCCATCAAGGACG+AGG | 0.618258 | 3.2:+70187578 | MS.gene25827:CDS |
GGTACAAATTCGATGATGAG+AGG | 0.619025 | 3.2:+70182441 | MS.gene25827:intron |
CCTTGATGATCTTAAAACCA+AGG | 0.621273 | 3.2:+70187736 | MS.gene25827:CDS |
AGTTACCGCAAACAAATCCT+GGG | 0.623329 | 3.2:+70182603 | MS.gene25827:intron |
TTGTATAGTTCCCTCAACAA+CGG | 0.626647 | 3.2:-70176857 | None:intergenic |
TCCTGACGAAGAGTTTAGCA+AGG | 0.626754 | 3.2:+70188916 | MS.gene25827:CDS |
GCCAAAGGGATGCTTCCCGA+GGG | 0.629854 | 3.2:-70176581 | None:intergenic |
GTACAAATTCGATGATGAGA+GGG | 0.630828 | 3.2:+70182442 | MS.gene25827:CDS |
AATTGTATGATCCTAGTAGA+GGG | 0.631770 | 3.2:+70176263 | MS.gene25827:CDS |
TATTTGGTGAATTTAAATGG+TGG | 0.635118 | 3.2:-70182635 | None:intergenic |
GACGAAAGAAGACAATAAGC+GGG | 0.635458 | 3.2:+70182466 | MS.gene25827:CDS |
TCGTTTCAGGATGCTAAGAA+GGG | 0.635505 | 3.2:+70177774 | MS.gene25827:intron |
ATACTGGACATTGCGAGCAG+AGG | 0.636958 | 3.2:+70188411 | MS.gene25827:CDS |
TAGACCGCTGACACACATTG+AGG | 0.640692 | 3.2:+70183889 | MS.gene25827:CDS |
TTCTCAGGCAAATCAGCGTG+TGG | 0.640956 | 3.2:-70174450 | None:intergenic |
ACCTGAAACTGCCAATACTG+TGG | 0.641830 | 3.2:+70175333 | MS.gene25827:CDS |
GCACTAGAGGAGCAATATGG+TGG | 0.647116 | 3.2:+70182488 | MS.gene25827:CDS |
GCGATCAAGATCAAGTTGTG+AGG | 0.647395 | 3.2:-70178810 | None:intergenic |
AGAAGATATTGTACTTTACG+AGG | 0.648777 | 3.2:+70184759 | MS.gene25827:CDS |
TGACGAAAGAAGACAATAAG+CGG | 0.650662 | 3.2:+70182465 | MS.gene25827:CDS |
GCTTTATACATATGATGATG+TGG | 0.650946 | 3.2:+70187253 | MS.gene25827:CDS |
TTTCCCAAAAGGAAACAATG+TGG | 0.651087 | 3.2:+70175602 | MS.gene25827:CDS |
AGAGGAGCAATATGGTGGCG+AGG | 0.653069 | 3.2:+70182493 | MS.gene25827:CDS |
AATGGGAGCGGACATCATGA+CGG | 0.654718 | 3.2:-70174165 | None:intergenic |
GGACAAAATCATATGCAATG+TGG | 0.655262 | 3.2:+70182700 | MS.gene25827:CDS |
TGAAGTTGAACGTCTTGAGG+GGG | 0.656240 | 3.2:+70177103 | MS.gene25827:CDS |
CGGACAAATGATCCACCCCT+CGG | 0.657040 | 3.2:-70187379 | None:intergenic |
TGCACCACCTGACAAGACAA+AGG | 0.658036 | 3.2:+70184516 | MS.gene25827:CDS |
CATGTGAATCTGGTTTGCGG+AGG | 0.661753 | 3.2:-70175376 | None:intergenic |
GCAGCAAATTCAAAACTTTG+GGG | 0.661908 | 3.2:+70188817 | MS.gene25827:intron |
TTATACATATGATGATGTGG+TGG | 0.665284 | 3.2:+70187256 | MS.gene25827:CDS |
TATGTTGGGCTCAAGAACCA+AGG | 0.667428 | 3.2:+70176379 | MS.gene25827:CDS |
TACCACTGTTCAGAGAGAGT+TGG | 0.667500 | 3.2:-70181801 | None:intergenic |
ACGTGGATTAGACGATCCTG+TGG | 0.669351 | 3.2:-70188648 | None:intergenic |
AGTACTACCAACCTTAACCA+TGG | 0.671899 | 3.2:-70177871 | None:intergenic |
ATTGAGAGAAGTGTCAAACA+AGG | 0.676361 | 3.2:+70184341 | MS.gene25827:CDS |
GGATCATACAATTCACCAAG+AGG | 0.677963 | 3.2:-70176253 | None:intergenic |
CCCCAGCCTATTAAGCACCG+AGG | 0.691280 | 3.2:+70187362 | MS.gene25827:CDS |
AGCCATCAGAAATCTTAACA+AGG | 0.693789 | 3.2:+70184707 | MS.gene25827:CDS |
CTACATAGAGTGCATCAATG+TGG | 0.696541 | 3.2:+70176906 | MS.gene25827:CDS |
GTTTCCTCAATGTGTGTCAG+CGG | 0.700523 | 3.2:-70183893 | None:intergenic |
TGTGAAGTGTGTAAAGATTG+CGG | 0.711608 | 3.2:-70178874 | None:intergenic |
GGCCAACTCTCTCTGAACAG+TGG | 0.714653 | 3.2:+70181799 | MS.gene25827:CDS |
GTTGTGAGGGAAACTCATAA+CGG | 0.717111 | 3.2:-70178796 | None:intergenic |
ATATATACGTGAAAGTGACA+AGG | 0.725331 | 3.2:+70182679 | MS.gene25827:CDS |
CCAGCCTATTAAGCACCGAG+GGG | 0.766069 | 3.2:+70187364 | MS.gene25827:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 70174161 | 70189380 | 70174161 | ID=MS.gene25827 |
chr3.2 | mRNA | 70174161 | 70189380 | 70174161 | ID=MS.gene25827.t1;Parent=MS.gene25827 |
chr3.2 | exon | 70174161 | 70174190 | 70174161 | ID=MS.gene25827.t1.exon1;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70174161 | 70174190 | 70174161 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70174423 | 70174495 | 70174423 | ID=MS.gene25827.t1.exon2;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70174423 | 70174495 | 70174423 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70175323 | 70175473 | 70175323 | ID=MS.gene25827.t1.exon3;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70175323 | 70175473 | 70175323 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70175590 | 70175747 | 70175590 | ID=MS.gene25827.t1.exon4;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70175590 | 70175747 | 70175590 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70176197 | 70176462 | 70176197 | ID=MS.gene25827.t1.exon5;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70176197 | 70176462 | 70176197 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70176545 | 70176763 | 70176545 | ID=MS.gene25827.t1.exon6;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70176545 | 70176763 | 70176545 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70176853 | 70176961 | 70176853 | ID=MS.gene25827.t1.exon7;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70176853 | 70176961 | 70176853 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70177045 | 70177160 | 70177045 | ID=MS.gene25827.t1.exon8;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70177045 | 70177160 | 70177045 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70177783 | 70177881 | 70177783 | ID=MS.gene25827.t1.exon9;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70177783 | 70177881 | 70177783 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70178788 | 70178897 | 70178788 | ID=MS.gene25827.t1.exon10;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70178788 | 70178897 | 70178788 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70181746 | 70181820 | 70181746 | ID=MS.gene25827.t1.exon11;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70181746 | 70181820 | 70181746 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70182442 | 70182520 | 70182442 | ID=MS.gene25827.t1.exon12;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70182442 | 70182520 | 70182442 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70182605 | 70182751 | 70182605 | ID=MS.gene25827.t1.exon13;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70182605 | 70182751 | 70182605 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70183057 | 70183137 | 70183057 | ID=MS.gene25827.t1.exon14;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70183057 | 70183137 | 70183057 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70183257 | 70183376 | 70183257 | ID=MS.gene25827.t1.exon15;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70183257 | 70183376 | 70183257 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70183800 | 70183922 | 70183800 | ID=MS.gene25827.t1.exon16;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70183800 | 70183922 | 70183800 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70184333 | 70184410 | 70184333 | ID=MS.gene25827.t1.exon17;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70184333 | 70184410 | 70184333 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70184502 | 70184590 | 70184502 | ID=MS.gene25827.t1.exon18;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70184502 | 70184590 | 70184502 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70184672 | 70184780 | 70184672 | ID=MS.gene25827.t1.exon19;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70184672 | 70184780 | 70184672 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70186065 | 70186133 | 70186065 | ID=MS.gene25827.t1.exon20;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70186065 | 70186133 | 70186065 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70186748 | 70186858 | 70186748 | ID=MS.gene25827.t1.exon21;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70186748 | 70186858 | 70186748 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70187066 | 70187121 | 70187066 | ID=MS.gene25827.t1.exon22;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70187066 | 70187121 | 70187066 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70187247 | 70187424 | 70187247 | ID=MS.gene25827.t1.exon23;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70187247 | 70187424 | 70187247 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70187498 | 70187599 | 70187498 | ID=MS.gene25827.t1.exon24;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70187498 | 70187599 | 70187498 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70187686 | 70187757 | 70187686 | ID=MS.gene25827.t1.exon25;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70187686 | 70187757 | 70187686 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70188065 | 70188130 | 70188065 | ID=MS.gene25827.t1.exon26;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70188065 | 70188130 | 70188065 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70188370 | 70188435 | 70188370 | ID=MS.gene25827.t1.exon27;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70188370 | 70188435 | 70188370 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70188621 | 70188707 | 70188621 | ID=MS.gene25827.t1.exon28;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70188621 | 70188707 | 70188621 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70188821 | 70188937 | 70188821 | ID=MS.gene25827.t1.exon29;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70188821 | 70188937 | 70188821 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70189087 | 70189161 | 70189087 | ID=MS.gene25827.t1.exon30;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70189087 | 70189161 | 70189087 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
chr3.2 | exon | 70189267 | 70189380 | 70189267 | ID=MS.gene25827.t1.exon31;Parent=MS.gene25827.t1 |
chr3.2 | CDS | 70189267 | 70189380 | 70189267 | ID=cds.MS.gene25827.t1;Parent=MS.gene25827.t1 |
Gene Sequence |
Protein sequence |