Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39862.t1 | XP_003617006.1 | 99.5 | 1110 | 5 | 0 | 1 | 1110 | 1 | 1110 | 0.00E+00 | 2242.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39862.t1 | Q84WU2 | 80.9 | 1112 | 200 | 6 | 1 | 1110 | 1 | 1102 | 0.0e+00 | 1847.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39862.t1 | G7KCQ5 | 99.5 | 1110 | 5 | 0 | 1 | 1110 | 1 | 1110 | 0.0e+00 | 2242.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049744 | MS.gene39862 | 0.812093 | 5.04E-51 | -1.69E-46 |
MS.gene052609 | MS.gene39862 | 0.832365 | 9.85E-56 | -1.69E-46 |
MS.gene056507 | MS.gene39862 | 0.8085 | 3.00E-50 | -1.69E-46 |
MS.gene056622 | MS.gene39862 | 0.806711 | 7.20E-50 | -1.69E-46 |
MS.gene058289 | MS.gene39862 | 0.810246 | 1.27E-50 | -1.69E-46 |
MS.gene058753 | MS.gene39862 | 0.810089 | 1.37E-50 | -1.69E-46 |
MS.gene058919 | MS.gene39862 | 0.842214 | 2.96E-58 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39862.t1 | MTR_5g086700 | 99.550 | 1110 | 5 | 0 | 1 | 1110 | 1 | 1110 | 0.0 | 2298 |
MS.gene39862.t1 | MTR_5g086700 | 99.279 | 1110 | 5 | 1 | 1 | 1110 | 1 | 1107 | 0.0 | 2287 |
MS.gene39862.t1 | MTR_3g079840 | 91.457 | 1112 | 87 | 3 | 1 | 1110 | 1 | 1106 | 0.0 | 2080 |
MS.gene39862.t1 | MTR_3g079840 | 91.367 | 1112 | 87 | 3 | 1 | 1110 | 1 | 1105 | 0.0 | 2077 |
MS.gene39862.t1 | MTR_1g041240 | 78.725 | 1114 | 225 | 7 | 1 | 1110 | 1 | 1106 | 0.0 | 1811 |
MS.gene39862.t1 | MTR_1g041240 | 78.507 | 1112 | 230 | 5 | 1 | 1110 | 1 | 1105 | 0.0 | 1810 |
MS.gene39862.t1 | MTR_1g041240 | 78.616 | 1113 | 226 | 7 | 1 | 1110 | 1 | 1104 | 0.0 | 1806 |
MS.gene39862.t1 | MTR_5g091450 | 61.798 | 356 | 120 | 5 | 533 | 882 | 156 | 501 | 6.48e-126 | 405 |
MS.gene39862.t1 | MTR_5g091450 | 71.724 | 145 | 38 | 2 | 41 | 184 | 15 | 157 | 6.27e-61 | 224 |
MS.gene39862.t1 | MTR_5g091550 | 73.606 | 269 | 69 | 2 | 539 | 807 | 147 | 413 | 3.64e-124 | 390 |
MS.gene39862.t1 | MTR_5g091550 | 58.594 | 128 | 53 | 0 | 57 | 184 | 15 | 142 | 3.49e-43 | 165 |
MS.gene39862.t1 | MTR_5g091550 | 72.263 | 274 | 69 | 3 | 539 | 807 | 147 | 418 | 9.74e-122 | 384 |
MS.gene39862.t1 | MTR_5g091550 | 58.594 | 128 | 53 | 0 | 57 | 184 | 15 | 142 | 3.86e-43 | 165 |
MS.gene39862.t1 | MTR_5g091410 | 68.641 | 287 | 83 | 5 | 543 | 826 | 7 | 289 | 1.58e-120 | 382 |
MS.gene39862.t1 | MTR_5g091530 | 64.483 | 290 | 82 | 2 | 533 | 822 | 84 | 352 | 9.19e-113 | 356 |
MS.gene39862.t1 | MTR_5g091530 | 59.770 | 87 | 35 | 0 | 100 | 186 | 1 | 87 | 1.27e-25 | 110 |
MS.gene39862.t1 | MTR_5g091180 | 67.123 | 292 | 82 | 2 | 533 | 822 | 169 | 448 | 1.27e-111 | 364 |
MS.gene39862.t1 | MTR_5g091180 | 55.063 | 158 | 68 | 2 | 30 | 184 | 13 | 170 | 1.76e-46 | 179 |
MS.gene39862.t1 | MTR_5g091430 | 66.031 | 262 | 85 | 2 | 566 | 826 | 2 | 260 | 9.44e-105 | 340 |
MS.gene39862.t1 | MTR_1g042160 | 45.312 | 128 | 68 | 1 | 61 | 186 | 13 | 140 | 3.64e-36 | 140 |
MS.gene39862.t1 | MTR_3g108660 | 32.867 | 286 | 176 | 8 | 204 | 482 | 107 | 383 | 1.12e-28 | 125 |
MS.gene39862.t1 | MTR_3g108660 | 32.867 | 286 | 176 | 8 | 204 | 482 | 107 | 383 | 1.22e-28 | 124 |
MS.gene39862.t1 | MTR_7g107200 | 42.636 | 129 | 71 | 2 | 61 | 186 | 13 | 141 | 1.30e-28 | 119 |
MS.gene39862.t1 | MTR_1g010040 | 28.857 | 350 | 212 | 10 | 204 | 525 | 107 | 447 | 7.55e-27 | 119 |
MS.gene39862.t1 | MTR_1g010040 | 28.857 | 350 | 212 | 10 | 204 | 525 | 107 | 447 | 7.79e-27 | 119 |
MS.gene39862.t1 | MTR_1g044450 | 41.781 | 146 | 75 | 5 | 49 | 188 | 49 | 190 | 7.29e-24 | 109 |
MS.gene39862.t1 | MTR_1g073800 | 35.359 | 181 | 93 | 5 | 11 | 188 | 17 | 176 | 1.05e-22 | 103 |
MS.gene39862.t1 | MTR_8g011730 | 36.691 | 139 | 83 | 3 | 51 | 185 | 4 | 141 | 2.06e-22 | 100 |
MS.gene39862.t1 | MTR_1g073790 | 41.353 | 133 | 68 | 5 | 60 | 188 | 61 | 187 | 1.01e-21 | 102 |
MS.gene39862.t1 | MTR_7g107160 | 37.313 | 134 | 72 | 3 | 62 | 184 | 131 | 263 | 2.33e-21 | 99.0 |
MS.gene39862.t1 | MTR_7g107160 | 39.437 | 71 | 43 | 0 | 118 | 188 | 4 | 74 | 4.33e-13 | 73.2 |
MS.gene39862.t1 | MTR_6g022290 | 25.902 | 305 | 197 | 12 | 204 | 493 | 29 | 319 | 1.10e-20 | 98.2 |
MS.gene39862.t1 | MTR_5g030360 | 26.990 | 289 | 191 | 9 | 204 | 483 | 154 | 431 | 4.05e-20 | 96.7 |
MS.gene39862.t1 | MTR_8g090190 | 27.434 | 339 | 191 | 12 | 203 | 499 | 22 | 347 | 1.14e-19 | 92.8 |
MS.gene39862.t1 | MTR_4g130940 | 25.731 | 342 | 200 | 13 | 204 | 528 | 92 | 396 | 2.74e-19 | 94.4 |
MS.gene39862.t1 | MTR_4g130940 | 25.731 | 342 | 200 | 13 | 204 | 528 | 92 | 396 | 3.11e-19 | 94.4 |
MS.gene39862.t1 | MTR_3g106700 | 34.375 | 128 | 79 | 3 | 64 | 186 | 71 | 198 | 3.60e-19 | 94.7 |
MS.gene39862.t1 | MTR_3g106700 | 35.211 | 142 | 81 | 3 | 56 | 186 | 401 | 542 | 4.01e-19 | 94.4 |
MS.gene39862.t1 | MTR_6g022310 | 26.280 | 293 | 189 | 13 | 204 | 482 | 127 | 406 | 5.98e-19 | 92.8 |
MS.gene39862.t1 | MTR_6g022300 | 26.280 | 293 | 191 | 12 | 204 | 483 | 67 | 347 | 9.43e-19 | 92.0 |
MS.gene39862.t1 | MTR_4g123750 | 33.793 | 145 | 86 | 4 | 54 | 188 | 12 | 156 | 9.93e-18 | 85.9 |
MS.gene39862.t1 | MTR_4g123750 | 31.915 | 141 | 92 | 2 | 54 | 191 | 169 | 308 | 8.49e-16 | 80.1 |
MS.gene39862.t1 | MTR_2g070390 | 25.316 | 316 | 205 | 10 | 198 | 493 | 16 | 320 | 8.47e-17 | 85.9 |
MS.gene39862.t1 | MTR_8g006190 | 35.000 | 120 | 71 | 2 | 74 | 186 | 5 | 124 | 1.14e-16 | 84.3 |
MS.gene39862.t1 | MTR_8g006190 | 28.889 | 180 | 114 | 4 | 17 | 190 | 121 | 292 | 6.38e-14 | 75.9 |
MS.gene39862.t1 | MTR_5g066000 | 25.497 | 302 | 183 | 13 | 205 | 482 | 543 | 826 | 6.17e-16 | 83.6 |
MS.gene39862.t1 | MTR_5g430360 | 28.713 | 202 | 134 | 6 | 284 | 483 | 70 | 263 | 7.75e-16 | 82.4 |
MS.gene39862.t1 | MTR_4g115880 | 23.607 | 377 | 188 | 14 | 202 | 485 | 195 | 564 | 1.06e-15 | 82.4 |
MS.gene39862.t1 | MTR_3g100480 | 24.189 | 339 | 188 | 15 | 205 | 490 | 585 | 907 | 1.07e-14 | 79.7 |
MS.gene39862.t1 | MTR_8g006190 | 28.889 | 180 | 114 | 4 | 17 | 190 | 113 | 284 | 6.23e-14 | 75.9 |
MS.gene39862.t1 | MTR_8g006190 | 35.577 | 104 | 60 | 2 | 90 | 186 | 13 | 116 | 3.31e-13 | 73.6 |
MS.gene39862.t1 | MTR_8g064910 | 23.856 | 306 | 199 | 12 | 204 | 493 | 54 | 341 | 5.01e-13 | 72.8 |
MS.gene39862.t1 | MTR_5g091460 | 74.419 | 43 | 11 | 0 | 566 | 608 | 2 | 44 | 1.09e-12 | 63.9 |
MS.gene39862.t1 | MTR_5g032380 | 24.796 | 367 | 206 | 17 | 189 | 531 | 410 | 730 | 1.86e-12 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39862.t1 | AT3G11910 | 81.025 | 1112 | 199 | 6 | 1 | 1110 | 1 | 1102 | 0.0 | 1862 |
MS.gene39862.t1 | AT3G11910 | 81.025 | 1112 | 199 | 6 | 1 | 1110 | 1 | 1102 | 0.0 | 1862 |
MS.gene39862.t1 | AT3G11910 | 80.935 | 1112 | 199 | 6 | 1 | 1110 | 1 | 1101 | 0.0 | 1860 |
MS.gene39862.t1 | AT3G11910 | 80.935 | 1112 | 199 | 6 | 1 | 1110 | 1 | 1101 | 0.0 | 1860 |
MS.gene39862.t1 | AT5G06600 | 81.688 | 1114 | 189 | 10 | 1 | 1110 | 1 | 1103 | 0.0 | 1853 |
MS.gene39862.t1 | AT5G06600 | 81.598 | 1114 | 189 | 10 | 1 | 1110 | 1 | 1102 | 0.0 | 1851 |
MS.gene39862.t1 | AT5G06600 | 82.175 | 993 | 163 | 9 | 1 | 989 | 1 | 983 | 0.0 | 1659 |
MS.gene39862.t1 | AT3G58250 | 48.485 | 132 | 66 | 1 | 61 | 190 | 10 | 141 | 1.53e-34 | 135 |
MS.gene39862.t1 | AT3G58270 | 46.565 | 131 | 70 | 0 | 60 | 190 | 7 | 137 | 7.02e-32 | 128 |
MS.gene39862.t1 | AT3G58270 | 46.565 | 131 | 70 | 0 | 60 | 190 | 7 | 137 | 7.02e-32 | 128 |
MS.gene39862.t1 | AT3G58270 | 46.565 | 131 | 70 | 0 | 60 | 190 | 7 | 137 | 7.02e-32 | 128 |
MS.gene39862.t1 | AT3G58360 | 43.056 | 144 | 80 | 1 | 61 | 204 | 8 | 149 | 4.23e-30 | 122 |
MS.gene39862.t1 | AT3G58340 | 40.000 | 145 | 85 | 1 | 61 | 205 | 8 | 150 | 4.71e-30 | 122 |
MS.gene39862.t1 | AT3G58340 | 43.548 | 124 | 70 | 0 | 61 | 184 | 8 | 131 | 7.51e-30 | 122 |
MS.gene39862.t1 | AT3G58370 | 46.875 | 128 | 65 | 2 | 60 | 184 | 8 | 135 | 9.42e-30 | 121 |
MS.gene39862.t1 | AT3G58410 | 44.275 | 131 | 70 | 1 | 61 | 191 | 8 | 135 | 9.44e-30 | 121 |
MS.gene39862.t1 | AT3G49600 | 29.640 | 361 | 212 | 12 | 200 | 533 | 102 | 447 | 1.51e-28 | 124 |
MS.gene39862.t1 | AT3G49600 | 29.640 | 361 | 212 | 12 | 200 | 533 | 102 | 447 | 1.51e-28 | 124 |
MS.gene39862.t1 | AT3G58210 | 42.105 | 133 | 75 | 1 | 60 | 190 | 7 | 139 | 1.78e-28 | 118 |
MS.gene39862.t1 | AT3G49600 | 31.507 | 292 | 181 | 9 | 200 | 483 | 102 | 382 | 2.09e-27 | 120 |
MS.gene39862.t1 | AT3G58410 | 41.985 | 131 | 59 | 1 | 61 | 191 | 29 | 142 | 8.40e-26 | 110 |
MS.gene39862.t1 | AT3G58350 | 39.098 | 133 | 78 | 2 | 61 | 190 | 8 | 140 | 3.12e-25 | 107 |
MS.gene39862.t1 | AT3G58350 | 39.098 | 133 | 78 | 2 | 61 | 190 | 8 | 140 | 3.12e-25 | 107 |
MS.gene39862.t1 | AT2G05410 | 40.288 | 139 | 80 | 2 | 54 | 190 | 1 | 138 | 4.00e-25 | 107 |
MS.gene39862.t1 | AT3G27040 | 38.931 | 131 | 79 | 1 | 61 | 190 | 9 | 139 | 8.12e-25 | 105 |
MS.gene39862.t1 | AT2G05420 | 38.686 | 137 | 75 | 2 | 62 | 190 | 10 | 145 | 2.39e-24 | 105 |
MS.gene39862.t1 | AT3G58200 | 38.017 | 121 | 74 | 1 | 54 | 173 | 1 | 121 | 2.07e-23 | 102 |
MS.gene39862.t1 | AT3G58260 | 31.064 | 235 | 118 | 8 | 62 | 260 | 9 | 235 | 3.13e-23 | 102 |
MS.gene39862.t1 | AT1G31390 | 40.800 | 125 | 71 | 1 | 54 | 175 | 1 | 125 | 1.82e-22 | 99.0 |
MS.gene39862.t1 | AT2G22310 | 26.415 | 318 | 185 | 8 | 203 | 481 | 22 | 329 | 4.25e-22 | 100 |
MS.gene39862.t1 | AT3G58290 | 35.664 | 143 | 80 | 3 | 53 | 184 | 3 | 144 | 7.17e-22 | 97.4 |
MS.gene39862.t1 | AT2G01790 | 38.462 | 130 | 77 | 1 | 64 | 190 | 11 | 140 | 9.39e-22 | 97.1 |
MS.gene39862.t1 | AT3G44790 | 38.168 | 131 | 76 | 2 | 61 | 190 | 5 | 131 | 1.22e-19 | 92.0 |
MS.gene39862.t1 | AT5G43560 | 41.667 | 132 | 70 | 5 | 63 | 191 | 72 | 199 | 1.66e-19 | 95.5 |
MS.gene39862.t1 | AT5G43560 | 41.667 | 132 | 70 | 5 | 63 | 191 | 72 | 199 | 1.66e-19 | 95.5 |
MS.gene39862.t1 | AT1G31400 | 38.346 | 133 | 76 | 3 | 61 | 190 | 8 | 137 | 2.75e-19 | 89.7 |
MS.gene39862.t1 | AT1G04300 | 40.299 | 134 | 73 | 5 | 61 | 191 | 69 | 198 | 2.89e-19 | 94.7 |
MS.gene39862.t1 | AT3G44800 | 35.878 | 131 | 83 | 1 | 61 | 190 | 5 | 135 | 7.33e-19 | 90.1 |
MS.gene39862.t1 | AT2G25320 | 35.766 | 137 | 76 | 4 | 61 | 186 | 404 | 539 | 1.52e-18 | 92.4 |
MS.gene39862.t1 | AT2G25320 | 33.333 | 132 | 75 | 4 | 64 | 186 | 75 | 202 | 3.13e-18 | 91.7 |
MS.gene39862.t1 | AT2G25320 | 35.766 | 137 | 76 | 4 | 61 | 186 | 405 | 540 | 1.55e-18 | 92.4 |
MS.gene39862.t1 | AT2G25320 | 33.333 | 132 | 75 | 4 | 64 | 186 | 76 | 203 | 3.13e-18 | 91.7 |
MS.gene39862.t1 | AT3G17380 | 33.103 | 145 | 90 | 2 | 51 | 188 | 11 | 155 | 1.55e-18 | 88.2 |
MS.gene39862.t1 | AT3G17380 | 25.714 | 140 | 100 | 2 | 54 | 190 | 168 | 306 | 1.11e-13 | 73.9 |
MS.gene39862.t1 | AT5G52330 | 38.281 | 128 | 73 | 4 | 63 | 188 | 22 | 145 | 1.90e-18 | 89.7 |
MS.gene39862.t1 | AT5G52330 | 38.281 | 128 | 73 | 4 | 63 | 188 | 22 | 145 | 1.90e-18 | 89.7 |
MS.gene39862.t1 | AT5G52330 | 38.281 | 128 | 73 | 4 | 63 | 188 | 22 | 145 | 1.90e-18 | 89.7 |
MS.gene39862.t1 | AT5G46740 | 25.989 | 354 | 217 | 15 | 165 | 490 | 121 | 457 | 3.86e-18 | 90.5 |
MS.gene39862.t1 | AT3G58400 | 40.000 | 110 | 64 | 2 | 82 | 190 | 24 | 132 | 4.09e-18 | 86.7 |
MS.gene39862.t1 | AT2G25320 | 35.252 | 139 | 78 | 4 | 61 | 188 | 405 | 542 | 4.32e-18 | 90.9 |
MS.gene39862.t1 | AT2G25320 | 33.333 | 132 | 75 | 4 | 64 | 186 | 76 | 203 | 5.03e-18 | 90.9 |
MS.gene39862.t1 | AT3G58220 | 33.333 | 132 | 81 | 4 | 62 | 189 | 13 | 141 | 5.76e-18 | 87.4 |
MS.gene39862.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 62 | 189 | 13 | 141 | 6.69e-18 | 85.5 |
MS.gene39862.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 62 | 189 | 13 | 141 | 9.99e-18 | 87.8 |
MS.gene39862.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 62 | 189 | 13 | 141 | 1.64e-17 | 86.3 |
MS.gene39862.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 62 | 189 | 13 | 141 | 1.72e-17 | 85.5 |
MS.gene39862.t1 | AT1G04300 | 38.028 | 142 | 73 | 6 | 61 | 191 | 69 | 206 | 1.98e-17 | 88.6 |
MS.gene39862.t1 | AT2G25330 | 30.128 | 156 | 94 | 5 | 43 | 186 | 25 | 177 | 4.73e-17 | 87.0 |
MS.gene39862.t1 | AT2G25330 | 33.094 | 139 | 82 | 3 | 61 | 188 | 359 | 497 | 1.32e-13 | 75.9 |
MS.gene39862.t1 | AT2G22310 | 25.231 | 325 | 192 | 10 | 215 | 499 | 1 | 314 | 6.92e-17 | 84.0 |
MS.gene39862.t1 | AT2G32880 | 30.303 | 198 | 121 | 7 | 9 | 192 | 123 | 317 | 1.10e-16 | 83.2 |
MS.gene39862.t1 | AT2G22310 | 27.103 | 214 | 135 | 6 | 296 | 499 | 107 | 309 | 1.69e-16 | 82.8 |
MS.gene39862.t1 | AT2G32870 | 29.858 | 211 | 119 | 8 | 9 | 192 | 207 | 415 | 2.83e-16 | 83.2 |
MS.gene39862.t1 | AT4G09780 | 34.228 | 149 | 94 | 4 | 41 | 186 | 194 | 341 | 3.18e-16 | 82.8 |
MS.gene39862.t1 | AT3G14400 | 24.920 | 313 | 202 | 11 | 204 | 493 | 24 | 326 | 3.63e-16 | 84.0 |
MS.gene39862.t1 | AT3G58440 | 40.157 | 127 | 72 | 4 | 61 | 186 | 10 | 133 | 4.42e-16 | 83.6 |
MS.gene39862.t1 | AT3G58240 | 33.333 | 132 | 86 | 2 | 56 | 186 | 3 | 133 | 5.59e-16 | 80.9 |
MS.gene39862.t1 | AT1G04300 | 42.241 | 116 | 60 | 5 | 79 | 191 | 68 | 179 | 2.17e-15 | 82.0 |
MS.gene39862.t1 | AT2G42460 | 38.462 | 130 | 76 | 3 | 62 | 190 | 10 | 136 | 4.30e-15 | 77.8 |
MS.gene39862.t1 | AT4G09780 | 31.447 | 159 | 96 | 4 | 41 | 186 | 194 | 352 | 4.95e-15 | 79.3 |
MS.gene39862.t1 | AT4G09770 | 32.298 | 161 | 98 | 5 | 41 | 198 | 140 | 292 | 1.11e-14 | 76.6 |
MS.gene39862.t1 | AT4G09770 | 32.298 | 161 | 98 | 5 | 41 | 198 | 140 | 292 | 1.11e-14 | 76.6 |
MS.gene39862.t1 | AT4G24560 | 25.962 | 312 | 188 | 15 | 204 | 490 | 542 | 835 | 1.54e-14 | 79.3 |
MS.gene39862.t1 | AT4G09770 | 32.298 | 161 | 98 | 5 | 41 | 198 | 166 | 318 | 1.61e-14 | 76.6 |
MS.gene39862.t1 | AT5G46740 | 27.523 | 218 | 134 | 8 | 282 | 490 | 46 | 248 | 3.59e-14 | 77.4 |
MS.gene39862.t1 | AT4G17895 | 25.733 | 307 | 180 | 13 | 204 | 485 | 176 | 459 | 5.14e-14 | 77.0 |
MS.gene39862.t1 | AT4G01390 | 33.548 | 155 | 94 | 5 | 43 | 192 | 149 | 299 | 5.64e-14 | 74.7 |
MS.gene39862.t1 | AT3G58290 | 38.000 | 100 | 50 | 3 | 53 | 141 | 3 | 101 | 3.49e-13 | 71.6 |
MS.gene39862.t1 | AT2G05410 | 38.614 | 101 | 59 | 2 | 92 | 190 | 1 | 100 | 5.80e-13 | 70.9 |
MS.gene39862.t1 | AT3G29580 | 32.558 | 129 | 82 | 3 | 60 | 185 | 7 | 133 | 7.33e-13 | 71.2 |
MS.gene39862.t1 | AT5G26320 | 31.206 | 141 | 86 | 4 | 55 | 186 | 57 | 195 | 8.08e-13 | 71.6 |
MS.gene39862.t1 | AT5G26280 | 28.378 | 148 | 99 | 3 | 46 | 186 | 46 | 193 | 1.48e-12 | 70.9 |
MS.gene39862.t1 | AT2G42475 | 36.434 | 129 | 75 | 5 | 54 | 180 | 1 | 124 | 2.03e-12 | 70.5 |
MS.gene39862.t1 | AT5G26260 | 29.861 | 144 | 94 | 3 | 50 | 186 | 51 | 194 | 2.05e-12 | 70.5 |
MS.gene39862.t1 | AT3G58280 | 31.818 | 110 | 72 | 2 | 82 | 191 | 29 | 135 | 2.60e-12 | 69.7 |
MS.gene39862.t1 | AT4G00780 | 33.548 | 155 | 94 | 5 | 43 | 192 | 148 | 298 | 4.20e-12 | 68.9 |
MS.gene39862.t1 | AT3G58380 | 28.244 | 131 | 93 | 1 | 61 | 190 | 8 | 138 | 4.67e-12 | 68.9 |
MS.gene39862.t1 | AT3G46190 | 31.034 | 145 | 96 | 2 | 42 | 186 | 163 | 303 | 5.68e-12 | 68.6 |
MS.gene39862.t1 | AT3G20370 | 30.935 | 139 | 81 | 6 | 46 | 173 | 50 | 184 | 7.89e-12 | 68.9 |
MS.gene39862.t1 | AT3G20370 | 30.935 | 139 | 81 | 6 | 46 | 173 | 72 | 206 | 8.08e-12 | 68.9 |
MS.gene39862.t1 | AT3G46190 | 31.034 | 145 | 96 | 2 | 42 | 186 | 143 | 283 | 9.08e-12 | 67.8 |
MS.gene39862.t1 | AT5G26280 | 31.858 | 113 | 72 | 2 | 79 | 186 | 100 | 212 | 9.73e-12 | 68.6 |
MS.gene39862.t1 | AT1G58270 | 30.714 | 140 | 88 | 3 | 62 | 198 | 254 | 387 | 2.05e-11 | 67.8 |
MS.gene39862.t1 | AT3G22080 | 27.397 | 146 | 94 | 4 | 41 | 174 | 1 | 146 | 5.38e-11 | 65.9 |
Find 240 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTACAGCAAATTCAGAATTT+TGG | 0.124418 | 5.4:-68474571 | MS.gene39862:intron |
AAGATATTGCTGAGCATTTA+AGG | 0.152035 | 5.4:-68480153 | MS.gene39862:CDS |
TTCTCACAGTGTACTTATTA+TGG | 0.159654 | 5.4:+68486777 | None:intergenic |
TCCACAGTGTTGGCGGTTTC+AGG | 0.181720 | 5.4:+68487245 | None:intergenic |
CATGTAAGCATTTGAATATT+TGG | 0.186742 | 5.4:+68480231 | None:intergenic |
CGCGGTTCCGCATGCGGATT+TGG | 0.211357 | 5.4:-68488987 | MS.gene39862:CDS |
GGACTATTTGTCCATGTATT+TGG | 0.214565 | 5.4:-68486876 | MS.gene39862:CDS |
GAATATTTGGTGAATTTAAA+AGG | 0.223359 | 5.4:+68480244 | None:intergenic |
TCCGTAGGATTGTTGATTAC+TGG | 0.243989 | 5.4:-68485895 | MS.gene39862:CDS |
GCTCCTCCATTGCCCGTTTA+GGG | 0.245382 | 5.4:+68480416 | None:intergenic |
CTTAGCAAGGTTAAATAAAA+TGG | 0.260792 | 5.4:-68477220 | MS.gene39862:CDS |
CTCCTACAGTGCTTTGCTTT+GGG | 0.266312 | 5.4:+68475577 | None:intergenic |
TAGTCCACATTGTTCCCTTT+TGG | 0.278526 | 5.4:+68486893 | None:intergenic |
AGCCTGACCTTTCGGAAATA+AGG | 0.283888 | 5.4:+68485776 | None:intergenic |
TGCTCCTCCATTGCCCGTTT+AGG | 0.285036 | 5.4:+68480415 | None:intergenic |
CATCTTCCTTTGGTTTATCT+AGG | 0.286963 | 5.4:+68476323 | None:intergenic |
CTGTACAATTCCAGCGCTTT+TGG | 0.291139 | 5.4:-68478204 | MS.gene39862:CDS |
GTGTGGGGTGAGCCTGATTT+TGG | 0.302835 | 5.4:+68476114 | None:intergenic |
AAAGAGCTGACAAAATCTTT+TGG | 0.307298 | 5.4:-68485555 | MS.gene39862:CDS |
TACTTGATAGGCTGGGGTTT+TGG | 0.314921 | 5.4:+68476073 | None:intergenic |
GATACCTTGAAAACGTTAAA+TGG | 0.315683 | 5.4:+68478876 | None:intergenic |
TCCTGATGTGCCTTCTTACT+TGG | 0.321434 | 5.4:-68476619 | MS.gene39862:CDS |
GTCTTCTCAGGTGGTGCAAT+GGG | 0.326614 | 5.4:+68477432 | None:intergenic |
TCTCCTACAGTGCTTTGCTT+TGG | 0.335296 | 5.4:+68475576 | None:intergenic |
TGACTTTATGCGGGATACTA+TGG | 0.341738 | 5.4:-68483219 | MS.gene39862:CDS |
AAAAGGAGTGTTATTGAATC+CGG | 0.344010 | 5.4:+68480261 | None:intergenic |
GATTTCCCCTCCCAGCGTTC+TGG | 0.345411 | 5.4:-68481801 | MS.gene39862:intron |
AGGCAGAAGTCATCTTCCTT+TGG | 0.347507 | 5.4:+68476313 | None:intergenic |
TGCTGAACAATATGGTTTGC+AGG | 0.347604 | 5.4:-68485016 | MS.gene39862:intron |
TATTGTAGGTTGTTCACTTT+CGG | 0.351875 | 5.4:-68476348 | MS.gene39862:intron |
ATTTGTGTCAATGGCCGATT+AGG | 0.352208 | 5.4:+68478148 | None:intergenic |
AAATACCATGCTGAACAATA+TGG | 0.352319 | 5.4:-68485024 | MS.gene39862:CDS |
TATTCAGATGTATTTGTTGT+TGG | 0.357395 | 5.4:-68487146 | MS.gene39862:CDS |
ATTCAGATGTATTTGTTGTT+GGG | 0.358987 | 5.4:-68487145 | MS.gene39862:CDS |
AATGTTAATTTCTTGTCAAT+AGG | 0.359284 | 5.4:+68476803 | None:intergenic |
AAGATCATATGCTGCTAATC+AGG | 0.362054 | 5.4:-68474038 | MS.gene39862:CDS |
TTCACATCCTTCATGCCTCT+TGG | 0.370593 | 5.4:-68485986 | MS.gene39862:CDS |
AAAACATAAATGATCAATAC+TGG | 0.377208 | 5.4:-68474961 | MS.gene39862:CDS |
AGCAACCTAAGCTCAGTATC+AGG | 0.383002 | 5.4:+68475239 | None:intergenic |
CCCCTCGGTACTTGATAGGC+TGG | 0.387609 | 5.4:+68476065 | None:intergenic |
GCAATCTTTACACACTTCAT+AGG | 0.390701 | 5.4:-68482394 | MS.gene39862:intron |
TAAAGTCCAATCTCTTCTTC+AGG | 0.392869 | 5.4:+68477186 | None:intergenic |
ATATCATCCTTTGTCTTCTC+AGG | 0.393483 | 5.4:+68477420 | None:intergenic |
TCACCTCTACACTATTATAA+AGG | 0.410063 | 5.4:-68479164 | MS.gene39862:intron |
CCCTCGGTACTTGATAGGCT+GGG | 0.411961 | 5.4:+68476066 | None:intergenic |
TCAATGCACGGGAAAGTGAC+TGG | 0.413176 | 5.4:-68486012 | MS.gene39862:CDS |
GCAATATGGTGGTGAGGAAG+AGG | 0.416940 | 5.4:-68480395 | MS.gene39862:intron |
AGTAGCTGAACAACTTGGTT+TGG | 0.417406 | 5.4:-68476146 | MS.gene39862:CDS |
CAACACTGGTGTCACTATAC+TGG | 0.417565 | 5.4:+68485583 | None:intergenic |
CCCTTTGATGGCAGTTATGT+TGG | 0.420767 | 5.4:-68477282 | MS.gene39862:intron |
TGACAAAAGAAGACCCTAAA+CGG | 0.421353 | 5.4:-68480429 | MS.gene39862:CDS |
AGAAGAGATTGGACTTTATG+AGG | 0.423419 | 5.4:-68477181 | MS.gene39862:intron |
AATCAGGTTAGTAACTTTGC+TGG | 0.424913 | 5.4:-68474022 | MS.gene39862:CDS |
ATCTTCCTTTGGTTTATCTA+GGG | 0.427379 | 5.4:+68476324 | None:intergenic |
AGAACAAACTTTGCAGAGCC+AGG | 0.428594 | 5.4:+68485613 | None:intergenic |
GCTTCCTCAATTTGTGTCAA+TGG | 0.429761 | 5.4:+68478139 | None:intergenic |
CCGGAGGAAAATCGATGAAC+AGG | 0.434336 | 5.4:+68483273 | None:intergenic |
ATTCTCCATGTGAATCTTGA+TGG | 0.434730 | 5.4:+68487203 | None:intergenic |
AGATATTGCTGAGCATTTAA+GGG | 0.439270 | 5.4:-68480152 | MS.gene39862:intron |
ACCATACATATCGTCCTAAT+CGG | 0.439597 | 5.4:-68478162 | MS.gene39862:CDS |
TTCAGCTGAAGCTGCAAGAC+CGG | 0.439731 | 5.4:+68483254 | None:intergenic |
TCCAAGTAAGAAGGCACATC+AGG | 0.444510 | 5.4:+68476618 | None:intergenic |
CGGGCAATGGAGGAGCAATA+TGG | 0.445556 | 5.4:-68480409 | MS.gene39862:CDS |
TGGACGACCCATCCAAAATC+AGG | 0.448812 | 5.4:-68476126 | MS.gene39862:CDS |
GATGGTGAAGGATCCTCAAC+AGG | 0.449558 | 5.4:+68487221 | None:intergenic |
ATCTATCACCTGATGCTGAT+AGG | 0.452444 | 5.4:-68482424 | MS.gene39862:CDS |
TGTCTTCTCAGGTGGTGCAA+TGG | 0.452606 | 5.4:+68477431 | None:intergenic |
TCCACCCCTCGGTACTTGAT+AGG | 0.456088 | 5.4:+68476061 | None:intergenic |
GAAGAGACGTATATGGTGCC+TGG | 0.458856 | 5.4:-68474102 | MS.gene39862:CDS |
ACCTTGACAAACTCATCGTC+TGG | 0.460568 | 5.4:+68474469 | None:intergenic |
GGTGCCTGGGAGCAGTATCT+TGG | 0.463110 | 5.4:-68474088 | MS.gene39862:CDS |
TGACAGAGAAGAGACGTATA+TGG | 0.464091 | 5.4:-68474109 | MS.gene39862:intron |
TACCGTAGCTCCTCTTTCTC+AGG | 0.468503 | 5.4:+68477372 | None:intergenic |
CACTATACTCACTTCATCCT+TGG | 0.472486 | 5.4:+68475832 | None:intergenic |
TATGATCCTGAAGAAGAGAT+TGG | 0.473570 | 5.4:-68477192 | MS.gene39862:CDS |
GTGGCACGAGATGAAGATCT+TGG | 0.476365 | 5.4:-68478978 | MS.gene39862:CDS |
ATTAACATTTCGAGCAAGCC+AGG | 0.480714 | 5.4:-68476789 | MS.gene39862:intron |
AAGAGTGAGGTTACGTCAAT+CGG | 0.480934 | 5.4:+68489397 | None:intergenic |
GCCGATTAGGACGATATGTA+TGG | 0.481513 | 5.4:+68478161 | None:intergenic |
TCTAATGAGCTTACATCTCC+AGG | 0.482490 | 5.4:+68476293 | None:intergenic |
ATAGGCTCACACATCACGTT+TGG | 0.484356 | 5.4:+68476821 | None:intergenic |
TTGTTGTTGGGAGTTACAAA+TGG | 0.484541 | 5.4:-68487133 | MS.gene39862:intron |
GAAGATCTTGGAGAACAGAT+TGG | 0.486177 | 5.4:-68478966 | MS.gene39862:CDS |
GTTATATGATCCTGAGAAAG+AGG | 0.486614 | 5.4:-68477382 | MS.gene39862:CDS |
GAAGAGGTTGCTAAAGAGTT+CGG | 0.489408 | 5.4:-68478232 | MS.gene39862:CDS |
CCGTGAATGCAGCTTGAAGA+TGG | 0.493627 | 5.4:-68476699 | MS.gene39862:intron |
GCAAGGTTAAATAAAATGGC+TGG | 0.494326 | 5.4:-68477216 | MS.gene39862:CDS |
GGCATATCATTCTCTGTTGT+AGG | 0.494452 | 5.4:+68485651 | None:intergenic |
AATAAGTACACTGTGAGAAA+AGG | 0.495525 | 5.4:-68486773 | MS.gene39862:intron |
AAAGGAGTGTTATTGAATCC+GGG | 0.495744 | 5.4:+68480262 | None:intergenic |
AACAGGCTCCACAGTGTTGG+CGG | 0.498367 | 5.4:+68487238 | None:intergenic |
GGAGAGGTTAAAGAAAGAAC+AGG | 0.500215 | 5.4:-68479224 | MS.gene39862:CDS |
CTGGGAGCAGTATCTTGGCT+TGG | 0.500471 | 5.4:-68474083 | MS.gene39862:CDS |
GTTGAAGTTGAACGTCTTGA+GGG | 0.502264 | 5.4:-68485054 | MS.gene39862:CDS |
CGGACATTCCTATCAGCATC+AGG | 0.502525 | 5.4:+68482416 | None:intergenic |
GGAATATGTGCACAATCGCC+AGG | 0.502785 | 5.4:-68476598 | MS.gene39862:intron |
TCAAAGGAAGCATAAACATC+AGG | 0.504903 | 5.4:+68485084 | None:intergenic |
TGCTCCTCATTATCCGTAGC+AGG | 0.506305 | 5.4:+68476651 | None:intergenic |
AAAAGGAGACTGGATATGTT+GGG | 0.510809 | 5.4:-68485859 | MS.gene39862:CDS |
GACAAAAGAAGACCCTAAAC+GGG | 0.510912 | 5.4:-68480428 | MS.gene39862:CDS |
TGTTGAAGTTGAACGTCTTG+AGG | 0.511531 | 5.4:-68485055 | MS.gene39862:CDS |
TTGCCCAAAGCCAAAAGCGC+TGG | 0.513860 | 5.4:+68478194 | None:intergenic |
TTTGGAAGTGGAGCGTGGAC+CGG | 0.515148 | 5.4:-68477554 | MS.gene39862:intron |
ATCCCTCTGCCAGAATTACA+AGG | 0.515348 | 5.4:-68475890 | MS.gene39862:CDS |
GCCGCACGCGGTTCCGCATG+CGG | 0.515972 | 5.4:-68488993 | MS.gene39862:CDS |
CAATGCACGGGAAAGTGACT+GGG | 0.517515 | 5.4:-68486011 | MS.gene39862:CDS |
ACACGTGGATTAGACGATCA+TGG | 0.518212 | 5.4:+68474724 | None:intergenic |
ACTATACAGAAATTGTTTGA+AGG | 0.519670 | 5.4:-68485344 | MS.gene39862:CDS |
TATGCTCGTTCACTACAATC+AGG | 0.520033 | 5.4:-68476026 | MS.gene39862:intron |
CAGTTACCACAGACAAATCC+CGG | 0.520297 | 5.4:-68480280 | MS.gene39862:CDS |
GCTTTGCTTTGGGAGTCTGA+TGG | 0.521563 | 5.4:+68475587 | None:intergenic |
AAAGGAAGATGACTTCTGCC+TGG | 0.521922 | 5.4:-68476311 | MS.gene39862:CDS |
TGCACTCGATGTAGTTCATA+TGG | 0.522812 | 5.4:+68485318 | None:intergenic |
CTCGTCCTGATACTGAGCTT+AGG | 0.523216 | 5.4:-68475244 | MS.gene39862:CDS |
AAACCTTGTAATTCTGGCAG+AGG | 0.523544 | 5.4:+68475887 | None:intergenic |
GAGGTTACGTCAATCGGAGC+AGG | 0.523979 | 5.4:+68489403 | None:intergenic |
CACGTGGATTAGACGATCAT+GGG | 0.524119 | 5.4:+68474725 | None:intergenic |
GTTCAGGCAACTGTCGTTGA+GGG | 0.524541 | 5.4:-68485368 | MS.gene39862:intron |
AGACACTACTCAGAACCAAA+TGG | 0.526141 | 5.4:-68474688 | MS.gene39862:intron |
ATATGTTGGGCTTAAGAACC+AGG | 0.528339 | 5.4:-68485846 | MS.gene39862:CDS |
GTTGAGAATAGCAGTTGTGT+GGG | 0.529254 | 5.4:+68476098 | None:intergenic |
TAGATATGCACAGTTTAGCT+TGG | 0.531238 | 5.4:-68486816 | MS.gene39862:CDS |
CAAAAGCGCTGGAATTGTAC+AGG | 0.531856 | 5.4:+68478205 | None:intergenic |
GTTCACAGTGGTGGTGTGCA+TGG | 0.533539 | 5.4:-68481779 | MS.gene39862:CDS |
TCCGCATGCGGAACCGCGTG+CGG | 0.534554 | 5.4:+68488992 | None:intergenic |
CTATACAGAAATTGTTTGAA+GGG | 0.534692 | 5.4:-68485343 | MS.gene39862:CDS |
CAATTCACCAAGAGGCATGA+AGG | 0.535350 | 5.4:+68485979 | None:intergenic |
GGCTCCTGCTACGGATAATG+AGG | 0.536307 | 5.4:-68476655 | MS.gene39862:CDS |
CGATCAAGATCAAGTTGCAA+TGG | 0.536998 | 5.4:+68482461 | None:intergenic |
AACCTTGCTAAGATTTCTGA+TGG | 0.537381 | 5.4:+68477231 | None:intergenic |
AACAAACTTTGCAGAGCCAG+GGG | 0.537595 | 5.4:+68485615 | None:intergenic |
TCATCCTTTGTCTTCTCAGG+TGG | 0.539767 | 5.4:+68477423 | None:intergenic |
GATTTGAATATGACTTTATG+CGG | 0.540156 | 5.4:-68483229 | MS.gene39862:CDS |
CCTCGGTACTTGATAGGCTG+GGG | 0.540177 | 5.4:+68476067 | None:intergenic |
AGAAGACCCTAAACGGGCAA+TGG | 0.541064 | 5.4:-68480422 | MS.gene39862:CDS |
GATCTTCAACTTGATGTCAA+AGG | 0.541747 | 5.4:-68485111 | MS.gene39862:CDS |
ATCTGCAACATCCAAATACA+TGG | 0.541837 | 5.4:+68486865 | None:intergenic |
CTTGATCTTGATCGTGACAA+TGG | 0.544545 | 5.4:-68482452 | MS.gene39862:CDS |
CTTTCAGAAGGCTCCTGCTA+CGG | 0.547214 | 5.4:-68476664 | MS.gene39862:CDS |
TGCACATATTCCAAGTAAGA+AGG | 0.547368 | 5.4:+68476609 | None:intergenic |
TTCATAAGATACCCTCTACT+AGG | 0.549694 | 5.4:+68485950 | None:intergenic |
TTGAAGTTGAACGTCTTGAG+GGG | 0.553237 | 5.4:-68485053 | MS.gene39862:CDS |
TATGCGGGATACTATGGTAA+AGG | 0.553596 | 5.4:-68483213 | MS.gene39862:intron |
GCTTTGGGAGTCTGATGGTG+TGG | 0.558257 | 5.4:+68475592 | None:intergenic |
AGCGTTCTGGTTCACAGTGG+TGG | 0.559857 | 5.4:-68481788 | MS.gene39862:CDS |
ACAGAGAATGATATGCCCTC+TGG | 0.560183 | 5.4:-68485645 | MS.gene39862:CDS |
ATTTGAATATGACTTTATGC+GGG | 0.561555 | 5.4:-68483228 | MS.gene39862:CDS |
GAACAAACTTTGCAGAGCCA+GGG | 0.564249 | 5.4:+68485614 | None:intergenic |
CGCAGCATCAGTTCAATGCA+CGG | 0.568279 | 5.4:-68486024 | MS.gene39862:CDS |
GTATATACGTGAAGCGGACA+AGG | 0.568613 | 5.4:-68480203 | MS.gene39862:CDS |
ATACAACTTCAGAGTCCTCA+AGG | 0.568662 | 5.4:+68474261 | None:intergenic |
TCATATTCCTTATTTCCGAA+AGG | 0.568714 | 5.4:-68485783 | MS.gene39862:intron |
CAACTAGTCTGCCCTACGGT+TGG | 0.569646 | 5.4:-68486841 | MS.gene39862:CDS |
AAGAGACGTATATGGTGCCT+GGG | 0.569774 | 5.4:-68474101 | MS.gene39862:CDS |
TGTTGAGAATAGCAGTTGTG+TGG | 0.569965 | 5.4:+68476097 | None:intergenic |
ATCCTGAGAAAGAGGAGCTA+CGG | 0.572589 | 5.4:-68477374 | MS.gene39862:intron |
GAAAGAGATTGCTACCTCCT+CGG | 0.573364 | 5.4:+68474928 | None:intergenic |
CATACACGAATGTGAGACTT+TGG | 0.575576 | 5.4:-68474530 | MS.gene39862:CDS |
GAGAGAGTAGCTGAACAACT+TGG | 0.575740 | 5.4:-68476151 | MS.gene39862:CDS |
CTCAACAGGCTCCACAGTGT+TGG | 0.575994 | 5.4:+68487235 | None:intergenic |
AACCTTGTAATTCTGGCAGA+GGG | 0.576300 | 5.4:+68475888 | None:intergenic |
AAAACTTGAAGACAAAATGA+AGG | 0.577785 | 5.4:-68485469 | MS.gene39862:intron |
GGTACAAATTTGATGATGAG+AGG | 0.578779 | 5.4:-68480453 | MS.gene39862:CDS |
TACTCTTATAATTGAAGCCG+AGG | 0.580435 | 5.4:-68485924 | MS.gene39862:CDS |
TGTTCAGGCAACTGTCGTTG+AGG | 0.582261 | 5.4:-68485369 | MS.gene39862:intron |
CAGATAAATGTTCCACCCCT+CGG | 0.582634 | 5.4:+68476050 | None:intergenic |
CAACACTGTGGAGCCTGTTG+AGG | 0.583424 | 5.4:-68487234 | MS.gene39862:CDS |
ATATTCAAATGCTTACATGC+TGG | 0.583488 | 5.4:-68480227 | MS.gene39862:CDS |
CCCAGCCTATCAAGTACCGA+GGG | 0.583532 | 5.4:-68476066 | MS.gene39862:CDS |
TCATATAGCATGTAGCTCCC+TGG | 0.584269 | 5.4:+68485828 | None:intergenic |
CGATAGATAATACCATCCAT+TGG | 0.585242 | 5.4:+68488944 | None:intergenic |
CTCCCAAAGCAAAGCACTGT+AGG | 0.585482 | 5.4:-68475579 | MS.gene39862:CDS |
TTGAATCCGGGATTTGTCTG+TGG | 0.586663 | 5.4:+68480274 | None:intergenic |
TCAGAGTCCTCAAGGTACTC+AGG | 0.587164 | 5.4:+68474269 | None:intergenic |
AATAATCATCAACCAATGGA+TGG | 0.590226 | 5.4:-68488956 | MS.gene39862:intron |
GGAAACTCCGCACTTTGTCA+TGG | 0.590348 | 5.4:+68478916 | None:intergenic |
AGACCCTAAACGGGCAATGG+AGG | 0.590791 | 5.4:-68480419 | MS.gene39862:CDS |
TCCAGTAATCAACAATCCTA+CGG | 0.593567 | 5.4:+68485894 | None:intergenic |
AGATATTATATGCTTTCAGA+AGG | 0.593862 | 5.4:-68476676 | MS.gene39862:CDS |
TCGGCCATTGACACAAATTG+AGG | 0.594021 | 5.4:-68478143 | MS.gene39862:CDS |
AACTTCAACATACTTGTCAA+AGG | 0.594147 | 5.4:+68485068 | None:intergenic |
AAGCCGAGGTCCTTGTCCGT+AGG | 0.594681 | 5.4:-68485910 | MS.gene39862:CDS |
GCAGCATCAGTTCAATGCAC+GGG | 0.596900 | 5.4:-68486023 | MS.gene39862:CDS |
TCCAGACGATGAGTTTGTCA+AGG | 0.597360 | 5.4:-68474470 | MS.gene39862:intron |
GTACAAATTTGATGATGAGA+GGG | 0.599822 | 5.4:-68480452 | MS.gene39862:CDS |
CTTCACCATCAAGATTCACA+TGG | 0.602048 | 5.4:-68487208 | MS.gene39862:CDS |
TGCATATCTACTCCAACCGT+AGG | 0.603099 | 5.4:+68486829 | None:intergenic |
CTTTAGTAAAATGATACACG+TGG | 0.603666 | 5.4:+68474709 | None:intergenic |
GAACAATAATCATCAACCAA+TGG | 0.603852 | 5.4:-68488960 | MS.gene39862:CDS |
AATCGGAGCAGGAGTCATGA+TGG | 0.604741 | 5.4:+68489414 | None:intergenic |
CAAGCCAAGATACTGCTCCC+AGG | 0.610930 | 5.4:+68474084 | None:intergenic |
CATTCTCTGTTGTAGGCATG+TGG | 0.612114 | 5.4:+68485658 | None:intergenic |
GCCTATCAAGTACCGAGGGG+TGG | 0.613647 | 5.4:-68476062 | MS.gene39862:CDS |
GAATTGTATGATCCTAGTAG+AGG | 0.616256 | 5.4:-68485962 | MS.gene39862:CDS |
CACAGTGGTGGTGTGCATGG+TGG | 0.617596 | 5.4:-68481776 | MS.gene39862:CDS |
GGACTATAAATCAACACGAA+AGG | 0.618503 | 5.4:-68485288 | MS.gene39862:CDS |
TCTTGGAGAACAGATTGGAA+AGG | 0.620139 | 5.4:-68478961 | MS.gene39862:CDS |
TGCGTTTCATCATGCTACCA+AGG | 0.622353 | 5.4:-68475849 | MS.gene39862:CDS |
AGACTCTTTGTGAACAACAC+TGG | 0.625132 | 5.4:-68477258 | MS.gene39862:CDS |
TTCTCAGCCAAATCCGCATG+CGG | 0.626749 | 5.4:+68488980 | None:intergenic |
AACCATCAGAAATCTTAGCA+AGG | 0.627786 | 5.4:-68477233 | MS.gene39862:CDS |
GCATATCTACTCCAACCGTA+GGG | 0.628168 | 5.4:+68486830 | None:intergenic |
AATTGTATGATCCTAGTAGA+GGG | 0.631770 | 5.4:-68485961 | MS.gene39862:CDS |
TTTGTAGCAACAACAGCAGG+AGG | 0.633116 | 5.4:-68489032 | MS.gene39862:intron |
AGCTGAAGCTGCAAGACCGG+AGG | 0.633804 | 5.4:+68483257 | None:intergenic |
GGCCGACTCTCTCTGATCAG+TGG | 0.636295 | 5.4:-68481733 | MS.gene39862:intron |
GGAGGAGCAATATGGTGGTG+AGG | 0.636914 | 5.4:-68480401 | MS.gene39862:CDS |
AATCCTACGGACAAGGACCT+CGG | 0.639665 | 5.4:+68485907 | None:intergenic |
TACTTCATAGTACAATATGT+CGG | 0.641200 | 5.4:+68475919 | None:intergenic |
GCAAACCATATTGTTCAGCA+TGG | 0.645378 | 5.4:+68485019 | None:intergenic |
AGAGATGCTTGTGCCGCACG+CGG | 0.646573 | 5.4:-68489005 | MS.gene39862:CDS |
AATCAACAATCCTACGGACA+AGG | 0.650687 | 5.4:+68485900 | None:intergenic |
TATGAAGTGTGTAAAGATTG+CGG | 0.652145 | 5.4:+68482396 | None:intergenic |
ATACTGGACACTACGAGCCG+AGG | 0.654398 | 5.4:-68474945 | MS.gene39862:CDS |
CCCCAGCCTATCAAGTACCG+AGG | 0.655681 | 5.4:-68476067 | MS.gene39862:CDS |
CACTGTAGGAGATGTCCTTG+AGG | 0.656432 | 5.4:-68475565 | MS.gene39862:CDS |
ACACCTTTATAATAGTGTAG+AGG | 0.656703 | 5.4:+68479161 | None:intergenic |
GCTGGTGTATATACGTGAAG+CGG | 0.658117 | 5.4:-68480209 | MS.gene39862:CDS |
TTGTAGACCATGACAAAGTG+CGG | 0.658674 | 5.4:-68478923 | MS.gene39862:CDS |
CTGGACACTACGAGCCGAGG+AGG | 0.660468 | 5.4:-68474942 | MS.gene39862:intron |
TTGAGAATAGCAGTTGTGTG+GGG | 0.660587 | 5.4:+68476099 | None:intergenic |
TGAAGTTGAACGTCTTGAGG+GGG | 0.668130 | 5.4:-68485052 | MS.gene39862:CDS |
TCGGTCCCTAGATAAACCAA+AGG | 0.670139 | 5.4:-68476329 | MS.gene39862:CDS |
TACCACTGATCAGAGAGAGT+CGG | 0.670322 | 5.4:+68481731 | None:intergenic |
AGGGCGTCCTGAGTACCTTG+AGG | 0.672202 | 5.4:-68474276 | MS.gene39862:CDS |
AAGAAGGCACATCAGGATAG+CGG | 0.672277 | 5.4:+68476625 | None:intergenic |
GCAATGGAGGAGCAATATGG+TGG | 0.673604 | 5.4:-68480406 | MS.gene39862:CDS |
GGATCATACAATTCACCAAG+AGG | 0.677963 | 5.4:+68485971 | None:intergenic |
ATTGAGAGAGATATCGAACA+AGG | 0.683338 | 5.4:-68477602 | MS.gene39862:CDS |
ACCTGAAACCGCCAACACTG+TGG | 0.685308 | 5.4:-68487246 | MS.gene39862:CDS |
GATTCAACTAGTCTGCCCTA+CGG | 0.687256 | 5.4:-68486845 | MS.gene39862:CDS |
TGCACCACCTGAGAAGACAA+AGG | 0.690536 | 5.4:-68477427 | MS.gene39862:CDS |
CTACATCGAGTGCATCAATG+TGG | 0.692185 | 5.4:-68485309 | MS.gene39862:CDS |
CATGTGAATCTTGATGGTGA+AGG | 0.695438 | 5.4:+68487209 | None:intergenic |
TATGTTGGGCTTAAGAACCA+GGG | 0.701641 | 5.4:-68485845 | MS.gene39862:CDS |
ACGTGGATTAGACGATCATG+GGG | 0.702245 | 5.4:+68474726 | None:intergenic |
AATGCACGGGAAAGTGACTG+GGG | 0.703427 | 5.4:-68486010 | MS.gene39862:CDS |
CCCAGCGTTCTGGTTCACAG+TGG | 0.725867 | 5.4:-68481791 | MS.gene39862:intron |
ACAAACTTTGCAGAGCCAGG+GGG | 0.728959 | 5.4:+68485616 | None:intergenic |
CCAGCCTATCAAGTACCGAG+GGG | 0.766069 | 5.4:-68476065 | MS.gene39862:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 68474003 | 68489440 | 68474003 | ID=MS.gene39862 |
chr5.4 | mRNA | 68474003 | 68489440 | 68474003 | ID=MS.gene39862.t1;Parent=MS.gene39862 |
chr5.4 | exon | 68489411 | 68489440 | 68489411 | ID=MS.gene39862.t1.exon1;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68489411 | 68489440 | 68489411 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68488957 | 68489047 | 68488957 | ID=MS.gene39862.t1.exon2;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68488957 | 68489047 | 68488957 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68487134 | 68487278 | 68487134 | ID=MS.gene39862.t1.exon3;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68487134 | 68487278 | 68487134 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68486774 | 68486931 | 68486774 | ID=MS.gene39862.t1.exon4;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68486774 | 68486931 | 68486774 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68485784 | 68486049 | 68485784 | ID=MS.gene39862.t1.exon5;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68485784 | 68486049 | 68485784 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68485470 | 68485688 | 68485470 | ID=MS.gene39862.t1.exon6;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68485470 | 68485688 | 68485470 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68485276 | 68485384 | 68485276 | ID=MS.gene39862.t1.exon7;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68485276 | 68485384 | 68485276 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68485017 | 68485132 | 68485017 | ID=MS.gene39862.t1.exon8;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68485017 | 68485132 | 68485017 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68483214 | 68483312 | 68483214 | ID=MS.gene39862.t1.exon9;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68483214 | 68483312 | 68483214 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68482395 | 68482504 | 68482395 | ID=MS.gene39862.t1.exon10;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68482395 | 68482504 | 68482395 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68481734 | 68481808 | 68481734 | ID=MS.gene39862.t1.exon11;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68481734 | 68481808 | 68481734 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68480396 | 68480474 | 68480396 | ID=MS.gene39862.t1.exon12;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68480396 | 68480474 | 68480396 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68480153 | 68480299 | 68480153 | ID=MS.gene39862.t1.exon13;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68480153 | 68480299 | 68480153 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68479165 | 68479245 | 68479165 | ID=MS.gene39862.t1.exon14;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68479165 | 68479245 | 68479165 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68478881 | 68479000 | 68478881 | ID=MS.gene39862.t1.exon15;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68478881 | 68479000 | 68478881 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68478132 | 68478254 | 68478132 | ID=MS.gene39862.t1.exon16;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68478132 | 68478254 | 68478132 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68477555 | 68477632 | 68477555 | ID=MS.gene39862.t1.exon17;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68477555 | 68477632 | 68477555 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68477375 | 68477463 | 68477375 | ID=MS.gene39862.t1.exon18;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68477375 | 68477463 | 68477375 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68477182 | 68477290 | 68477182 | ID=MS.gene39862.t1.exon19;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68477182 | 68477290 | 68477182 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68476790 | 68476858 | 68476790 | ID=MS.gene39862.t1.exon20;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68476790 | 68476858 | 68476790 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68476599 | 68476709 | 68476599 | ID=MS.gene39862.t1.exon21;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68476599 | 68476709 | 68476599 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68476307 | 68476362 | 68476307 | ID=MS.gene39862.t1.exon22;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68476307 | 68476362 | 68476307 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68476027 | 68476204 | 68476027 | ID=MS.gene39862.t1.exon23;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68476027 | 68476204 | 68476027 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68475844 | 68475945 | 68475844 | ID=MS.gene39862.t1.exon24;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68475844 | 68475945 | 68475844 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68475551 | 68475622 | 68475551 | ID=MS.gene39862.t1.exon25;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68475551 | 68475622 | 68475551 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68475211 | 68475276 | 68475211 | ID=MS.gene39862.t1.exon26;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68475211 | 68475276 | 68475211 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68474943 | 68475008 | 68474943 | ID=MS.gene39862.t1.exon27;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68474943 | 68475008 | 68474943 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68474689 | 68474775 | 68474689 | ID=MS.gene39862.t1.exon28;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68474689 | 68474775 | 68474689 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68474471 | 68474587 | 68474471 | ID=MS.gene39862.t1.exon29;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68474471 | 68474587 | 68474471 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68474247 | 68474321 | 68474247 | ID=MS.gene39862.t1.exon30;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68474247 | 68474321 | 68474247 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
chr5.4 | exon | 68474003 | 68474125 | 68474003 | ID=MS.gene39862.t1.exon31;Parent=MS.gene39862.t1 |
chr5.4 | CDS | 68474003 | 68474125 | 68474003 | ID=cds.MS.gene39862.t1;Parent=MS.gene39862.t1 |
Gene Sequence |
Protein sequence |