Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37878.t1 | XP_003617006.1 | 99.5 | 1107 | 5 | 0 | 1 | 1107 | 4 | 1110 | 0.00E+00 | 2236.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37878.t1 | Q84WU2 | 81.0 | 1109 | 199 | 6 | 1 | 1107 | 4 | 1102 | 0.0e+00 | 1842.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37878.t1 | G7KCQ5 | 99.5 | 1107 | 5 | 0 | 1 | 1107 | 4 | 1110 | 0.0e+00 | 2236.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05686 | MS.gene37878 | 0.801879 | 7.31E-49 | -1.69E-46 |
MS.gene058919 | MS.gene37878 | 0.809225 | 2.10E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37878.t1 | MTR_5g086700 | 99.548 | 1107 | 5 | 0 | 1 | 1107 | 4 | 1110 | 0.0 | 2292 |
MS.gene37878.t1 | MTR_5g086700 | 99.277 | 1107 | 5 | 1 | 1 | 1107 | 4 | 1107 | 0.0 | 2281 |
MS.gene37878.t1 | MTR_3g079840 | 91.524 | 1109 | 86 | 3 | 1 | 1107 | 4 | 1106 | 0.0 | 2073 |
MS.gene37878.t1 | MTR_3g079840 | 91.434 | 1109 | 86 | 3 | 1 | 1107 | 4 | 1105 | 0.0 | 2071 |
MS.gene37878.t1 | MTR_1g041240 | 78.739 | 1110 | 224 | 7 | 2 | 1107 | 5 | 1106 | 0.0 | 1806 |
MS.gene37878.t1 | MTR_1g041240 | 78.520 | 1108 | 229 | 5 | 2 | 1107 | 5 | 1105 | 0.0 | 1805 |
MS.gene37878.t1 | MTR_1g041240 | 78.559 | 1110 | 227 | 6 | 1 | 1107 | 3 | 1104 | 0.0 | 1805 |
MS.gene37878.t1 | MTR_5g091450 | 61.798 | 356 | 120 | 5 | 530 | 879 | 156 | 501 | 6.56e-126 | 404 |
MS.gene37878.t1 | MTR_5g091450 | 71.724 | 145 | 38 | 2 | 38 | 181 | 15 | 157 | 6.54e-61 | 224 |
MS.gene37878.t1 | MTR_5g091550 | 73.606 | 269 | 69 | 2 | 536 | 804 | 147 | 413 | 3.51e-124 | 390 |
MS.gene37878.t1 | MTR_5g091550 | 58.594 | 128 | 53 | 0 | 54 | 181 | 15 | 142 | 3.38e-43 | 165 |
MS.gene37878.t1 | MTR_5g091550 | 72.263 | 274 | 69 | 3 | 536 | 804 | 147 | 418 | 7.87e-122 | 384 |
MS.gene37878.t1 | MTR_5g091550 | 58.594 | 128 | 53 | 0 | 54 | 181 | 15 | 142 | 3.64e-43 | 165 |
MS.gene37878.t1 | MTR_5g091410 | 68.641 | 287 | 83 | 5 | 540 | 823 | 7 | 289 | 1.25e-120 | 382 |
MS.gene37878.t1 | MTR_5g091530 | 64.483 | 290 | 82 | 2 | 530 | 819 | 84 | 352 | 1.25e-112 | 355 |
MS.gene37878.t1 | MTR_5g091530 | 59.770 | 87 | 35 | 0 | 97 | 183 | 1 | 87 | 1.29e-25 | 110 |
MS.gene37878.t1 | MTR_5g091180 | 67.123 | 292 | 82 | 2 | 530 | 819 | 169 | 448 | 1.23e-111 | 364 |
MS.gene37878.t1 | MTR_5g091180 | 55.063 | 158 | 68 | 2 | 27 | 181 | 13 | 170 | 1.88e-46 | 179 |
MS.gene37878.t1 | MTR_5g091430 | 66.031 | 262 | 85 | 2 | 563 | 823 | 2 | 260 | 6.82e-105 | 340 |
MS.gene37878.t1 | MTR_1g042160 | 45.312 | 128 | 68 | 1 | 58 | 183 | 13 | 140 | 3.63e-36 | 140 |
MS.gene37878.t1 | MTR_3g108660 | 32.867 | 286 | 176 | 8 | 201 | 479 | 107 | 383 | 1.13e-28 | 125 |
MS.gene37878.t1 | MTR_3g108660 | 32.867 | 286 | 176 | 8 | 201 | 479 | 107 | 383 | 1.28e-28 | 124 |
MS.gene37878.t1 | MTR_7g107200 | 42.636 | 129 | 71 | 2 | 58 | 183 | 13 | 141 | 1.29e-28 | 119 |
MS.gene37878.t1 | MTR_1g010040 | 28.857 | 350 | 212 | 10 | 201 | 522 | 107 | 447 | 7.98e-27 | 119 |
MS.gene37878.t1 | MTR_1g010040 | 28.857 | 350 | 212 | 10 | 201 | 522 | 107 | 447 | 8.09e-27 | 119 |
MS.gene37878.t1 | MTR_1g044450 | 41.781 | 146 | 75 | 5 | 46 | 185 | 49 | 190 | 7.32e-24 | 109 |
MS.gene37878.t1 | MTR_1g073800 | 35.359 | 181 | 93 | 5 | 8 | 185 | 17 | 176 | 1.11e-22 | 103 |
MS.gene37878.t1 | MTR_8g011730 | 36.691 | 139 | 83 | 3 | 48 | 182 | 4 | 141 | 1.78e-22 | 100 |
MS.gene37878.t1 | MTR_1g073790 | 41.353 | 133 | 68 | 5 | 57 | 185 | 61 | 187 | 9.70e-22 | 102 |
MS.gene37878.t1 | MTR_7g107160 | 37.313 | 134 | 72 | 3 | 59 | 181 | 131 | 263 | 2.14e-21 | 99.0 |
MS.gene37878.t1 | MTR_7g107160 | 39.437 | 71 | 43 | 0 | 115 | 185 | 4 | 74 | 4.21e-13 | 73.6 |
MS.gene37878.t1 | MTR_6g022290 | 25.902 | 305 | 197 | 12 | 201 | 490 | 29 | 319 | 1.08e-20 | 98.2 |
MS.gene37878.t1 | MTR_5g030360 | 26.990 | 289 | 191 | 9 | 201 | 480 | 154 | 431 | 4.62e-20 | 96.7 |
MS.gene37878.t1 | MTR_8g090190 | 27.434 | 339 | 191 | 12 | 200 | 496 | 22 | 347 | 1.02e-19 | 92.8 |
MS.gene37878.t1 | MTR_4g130940 | 25.731 | 342 | 200 | 13 | 201 | 525 | 92 | 396 | 3.00e-19 | 94.4 |
MS.gene37878.t1 | MTR_4g130940 | 25.731 | 342 | 200 | 13 | 201 | 525 | 92 | 396 | 3.18e-19 | 94.0 |
MS.gene37878.t1 | MTR_3g106700 | 34.375 | 128 | 79 | 3 | 61 | 183 | 71 | 198 | 3.40e-19 | 94.7 |
MS.gene37878.t1 | MTR_3g106700 | 35.211 | 142 | 81 | 3 | 53 | 183 | 401 | 542 | 3.83e-19 | 94.4 |
MS.gene37878.t1 | MTR_6g022310 | 26.280 | 293 | 189 | 13 | 201 | 479 | 127 | 406 | 5.70e-19 | 92.8 |
MS.gene37878.t1 | MTR_6g022300 | 26.280 | 293 | 191 | 12 | 201 | 480 | 67 | 347 | 9.23e-19 | 92.0 |
MS.gene37878.t1 | MTR_4g123750 | 33.793 | 145 | 86 | 4 | 51 | 185 | 12 | 156 | 1.02e-17 | 85.9 |
MS.gene37878.t1 | MTR_4g123750 | 31.915 | 141 | 92 | 2 | 51 | 188 | 169 | 308 | 8.46e-16 | 80.1 |
MS.gene37878.t1 | MTR_2g070390 | 25.316 | 316 | 205 | 10 | 195 | 490 | 16 | 320 | 8.44e-17 | 85.9 |
MS.gene37878.t1 | MTR_8g006190 | 35.000 | 120 | 71 | 2 | 71 | 183 | 5 | 124 | 1.18e-16 | 84.3 |
MS.gene37878.t1 | MTR_8g006190 | 28.889 | 180 | 114 | 4 | 14 | 187 | 121 | 292 | 6.59e-14 | 75.9 |
MS.gene37878.t1 | MTR_5g066000 | 25.497 | 302 | 183 | 13 | 202 | 479 | 543 | 826 | 6.09e-16 | 83.6 |
MS.gene37878.t1 | MTR_5g430360 | 28.713 | 202 | 134 | 6 | 281 | 480 | 70 | 263 | 7.27e-16 | 82.8 |
MS.gene37878.t1 | MTR_4g115880 | 23.607 | 377 | 188 | 14 | 199 | 482 | 195 | 564 | 9.65e-16 | 82.4 |
MS.gene37878.t1 | MTR_3g100480 | 24.189 | 339 | 188 | 15 | 202 | 487 | 585 | 907 | 9.96e-15 | 79.7 |
MS.gene37878.t1 | MTR_8g006190 | 28.889 | 180 | 114 | 4 | 14 | 187 | 113 | 284 | 6.21e-14 | 75.9 |
MS.gene37878.t1 | MTR_8g006190 | 35.577 | 104 | 60 | 2 | 87 | 183 | 13 | 116 | 3.45e-13 | 73.6 |
MS.gene37878.t1 | MTR_8g064910 | 23.856 | 306 | 199 | 12 | 201 | 490 | 54 | 341 | 4.49e-13 | 73.2 |
MS.gene37878.t1 | MTR_5g091460 | 74.419 | 43 | 11 | 0 | 563 | 605 | 2 | 44 | 1.09e-12 | 63.9 |
MS.gene37878.t1 | MTR_5g032380 | 24.796 | 367 | 206 | 17 | 186 | 528 | 410 | 730 | 1.51e-12 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37878.t1 | AT3G11910 | 81.064 | 1109 | 198 | 6 | 1 | 1107 | 4 | 1102 | 0.0 | 1857 |
MS.gene37878.t1 | AT3G11910 | 81.064 | 1109 | 198 | 6 | 1 | 1107 | 4 | 1102 | 0.0 | 1857 |
MS.gene37878.t1 | AT3G11910 | 80.974 | 1109 | 198 | 6 | 1 | 1107 | 4 | 1101 | 0.0 | 1855 |
MS.gene37878.t1 | AT3G11910 | 80.974 | 1109 | 198 | 6 | 1 | 1107 | 4 | 1101 | 0.0 | 1855 |
MS.gene37878.t1 | AT5G06600 | 81.728 | 1111 | 188 | 10 | 1 | 1107 | 4 | 1103 | 0.0 | 1849 |
MS.gene37878.t1 | AT5G06600 | 81.638 | 1111 | 188 | 10 | 1 | 1107 | 4 | 1102 | 0.0 | 1847 |
MS.gene37878.t1 | AT5G06600 | 82.222 | 990 | 162 | 9 | 1 | 986 | 4 | 983 | 0.0 | 1655 |
MS.gene37878.t1 | AT3G58250 | 48.485 | 132 | 66 | 1 | 58 | 187 | 10 | 141 | 1.55e-34 | 135 |
MS.gene37878.t1 | AT3G58270 | 46.565 | 131 | 70 | 0 | 57 | 187 | 7 | 137 | 7.13e-32 | 128 |
MS.gene37878.t1 | AT3G58270 | 46.565 | 131 | 70 | 0 | 57 | 187 | 7 | 137 | 7.13e-32 | 128 |
MS.gene37878.t1 | AT3G58270 | 46.565 | 131 | 70 | 0 | 57 | 187 | 7 | 137 | 7.13e-32 | 128 |
MS.gene37878.t1 | AT3G58340 | 40.000 | 145 | 85 | 1 | 58 | 202 | 8 | 150 | 4.35e-30 | 122 |
MS.gene37878.t1 | AT3G58360 | 43.056 | 144 | 80 | 1 | 58 | 201 | 8 | 149 | 4.38e-30 | 122 |
MS.gene37878.t1 | AT3G58340 | 43.548 | 124 | 70 | 0 | 58 | 181 | 8 | 131 | 8.00e-30 | 122 |
MS.gene37878.t1 | AT3G58410 | 44.275 | 131 | 70 | 1 | 58 | 188 | 8 | 135 | 9.59e-30 | 121 |
MS.gene37878.t1 | AT3G58370 | 46.875 | 128 | 65 | 2 | 57 | 181 | 8 | 135 | 9.66e-30 | 121 |
MS.gene37878.t1 | AT3G58210 | 42.105 | 133 | 75 | 1 | 57 | 187 | 7 | 139 | 1.75e-28 | 118 |
MS.gene37878.t1 | AT3G49600 | 29.640 | 361 | 212 | 12 | 197 | 530 | 102 | 447 | 1.90e-28 | 124 |
MS.gene37878.t1 | AT3G49600 | 29.640 | 361 | 212 | 12 | 197 | 530 | 102 | 447 | 1.90e-28 | 124 |
MS.gene37878.t1 | AT3G49600 | 31.507 | 292 | 181 | 9 | 197 | 480 | 102 | 382 | 2.08e-27 | 120 |
MS.gene37878.t1 | AT3G58410 | 41.985 | 131 | 59 | 1 | 58 | 188 | 29 | 142 | 8.94e-26 | 110 |
MS.gene37878.t1 | AT3G58350 | 39.098 | 133 | 78 | 2 | 58 | 187 | 8 | 140 | 2.91e-25 | 107 |
MS.gene37878.t1 | AT3G58350 | 39.098 | 133 | 78 | 2 | 58 | 187 | 8 | 140 | 2.91e-25 | 107 |
MS.gene37878.t1 | AT2G05410 | 40.288 | 139 | 80 | 2 | 51 | 187 | 1 | 138 | 3.84e-25 | 107 |
MS.gene37878.t1 | AT3G27040 | 38.931 | 131 | 79 | 1 | 58 | 187 | 9 | 139 | 8.41e-25 | 105 |
MS.gene37878.t1 | AT2G05420 | 38.686 | 137 | 75 | 2 | 59 | 187 | 10 | 145 | 2.53e-24 | 105 |
MS.gene37878.t1 | AT3G58200 | 38.017 | 121 | 74 | 1 | 51 | 170 | 1 | 121 | 2.07e-23 | 102 |
MS.gene37878.t1 | AT3G58260 | 31.064 | 235 | 118 | 8 | 59 | 257 | 9 | 235 | 3.24e-23 | 102 |
MS.gene37878.t1 | AT1G31390 | 40.800 | 125 | 71 | 1 | 51 | 172 | 1 | 125 | 1.94e-22 | 99.0 |
MS.gene37878.t1 | AT2G22310 | 26.415 | 318 | 185 | 8 | 200 | 478 | 22 | 329 | 4.40e-22 | 100 |
MS.gene37878.t1 | AT3G58290 | 35.664 | 143 | 80 | 3 | 50 | 181 | 3 | 144 | 7.78e-22 | 97.4 |
MS.gene37878.t1 | AT2G01790 | 38.462 | 130 | 77 | 1 | 61 | 187 | 11 | 140 | 9.10e-22 | 97.1 |
MS.gene37878.t1 | AT3G44790 | 38.168 | 131 | 76 | 2 | 58 | 187 | 5 | 131 | 1.22e-19 | 92.0 |
MS.gene37878.t1 | AT5G43560 | 41.667 | 132 | 70 | 5 | 60 | 188 | 72 | 199 | 1.80e-19 | 95.5 |
MS.gene37878.t1 | AT5G43560 | 41.667 | 132 | 70 | 5 | 60 | 188 | 72 | 199 | 1.80e-19 | 95.5 |
MS.gene37878.t1 | AT1G31400 | 37.143 | 140 | 82 | 3 | 51 | 187 | 1 | 137 | 2.93e-19 | 89.7 |
MS.gene37878.t1 | AT1G04300 | 40.299 | 134 | 73 | 5 | 58 | 188 | 69 | 198 | 3.00e-19 | 94.7 |
MS.gene37878.t1 | AT3G44800 | 35.878 | 131 | 83 | 1 | 58 | 187 | 5 | 135 | 7.72e-19 | 89.7 |
MS.gene37878.t1 | AT2G25320 | 35.766 | 137 | 76 | 4 | 58 | 183 | 404 | 539 | 1.66e-18 | 92.4 |
MS.gene37878.t1 | AT2G25320 | 33.333 | 132 | 75 | 4 | 61 | 183 | 75 | 202 | 3.17e-18 | 91.7 |
MS.gene37878.t1 | AT2G25320 | 35.766 | 137 | 76 | 4 | 58 | 183 | 405 | 540 | 1.68e-18 | 92.4 |
MS.gene37878.t1 | AT2G25320 | 33.333 | 132 | 75 | 4 | 61 | 183 | 76 | 203 | 3.17e-18 | 91.7 |
MS.gene37878.t1 | AT3G17380 | 33.103 | 145 | 90 | 2 | 48 | 185 | 11 | 155 | 1.68e-18 | 88.2 |
MS.gene37878.t1 | AT3G17380 | 25.714 | 140 | 100 | 2 | 51 | 187 | 168 | 306 | 1.19e-13 | 73.6 |
MS.gene37878.t1 | AT5G52330 | 38.281 | 128 | 73 | 4 | 60 | 185 | 22 | 145 | 1.86e-18 | 89.7 |
MS.gene37878.t1 | AT5G52330 | 38.281 | 128 | 73 | 4 | 60 | 185 | 22 | 145 | 1.86e-18 | 89.7 |
MS.gene37878.t1 | AT5G52330 | 38.281 | 128 | 73 | 4 | 60 | 185 | 22 | 145 | 1.86e-18 | 89.7 |
MS.gene37878.t1 | AT5G46740 | 25.989 | 354 | 217 | 15 | 162 | 487 | 121 | 457 | 3.84e-18 | 90.5 |
MS.gene37878.t1 | AT3G58400 | 40.000 | 110 | 64 | 2 | 79 | 187 | 24 | 132 | 4.15e-18 | 86.7 |
MS.gene37878.t1 | AT2G25320 | 35.252 | 139 | 78 | 4 | 58 | 185 | 405 | 542 | 4.19e-18 | 90.9 |
MS.gene37878.t1 | AT2G25320 | 33.333 | 132 | 75 | 4 | 61 | 183 | 76 | 203 | 5.23e-18 | 90.9 |
MS.gene37878.t1 | AT3G58220 | 33.333 | 132 | 81 | 4 | 59 | 186 | 13 | 141 | 5.38e-18 | 87.4 |
MS.gene37878.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 59 | 186 | 13 | 141 | 7.26e-18 | 85.1 |
MS.gene37878.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 59 | 186 | 13 | 141 | 9.78e-18 | 87.8 |
MS.gene37878.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 59 | 186 | 13 | 141 | 1.59e-17 | 86.3 |
MS.gene37878.t1 | AT3G58220 | 34.074 | 135 | 76 | 5 | 59 | 186 | 13 | 141 | 1.93e-17 | 85.1 |
MS.gene37878.t1 | AT1G04300 | 38.028 | 142 | 73 | 6 | 58 | 188 | 69 | 206 | 2.14e-17 | 88.6 |
MS.gene37878.t1 | AT2G25330 | 30.128 | 156 | 94 | 5 | 40 | 183 | 25 | 177 | 4.22e-17 | 87.0 |
MS.gene37878.t1 | AT2G25330 | 33.094 | 139 | 82 | 3 | 58 | 185 | 359 | 497 | 1.23e-13 | 75.9 |
MS.gene37878.t1 | AT2G22310 | 25.231 | 325 | 192 | 10 | 212 | 496 | 1 | 314 | 7.29e-17 | 84.0 |
MS.gene37878.t1 | AT2G32880 | 30.303 | 198 | 121 | 7 | 6 | 189 | 123 | 317 | 1.14e-16 | 82.8 |
MS.gene37878.t1 | AT2G22310 | 27.103 | 214 | 135 | 6 | 293 | 496 | 107 | 309 | 1.60e-16 | 82.8 |
MS.gene37878.t1 | AT4G09780 | 34.228 | 149 | 94 | 4 | 38 | 183 | 194 | 341 | 3.06e-16 | 83.2 |
MS.gene37878.t1 | AT2G32870 | 29.858 | 211 | 119 | 8 | 6 | 189 | 207 | 415 | 3.14e-16 | 82.8 |
MS.gene37878.t1 | AT3G14400 | 24.920 | 313 | 202 | 11 | 201 | 490 | 24 | 326 | 3.32e-16 | 84.3 |
MS.gene37878.t1 | AT3G58440 | 40.157 | 127 | 72 | 4 | 58 | 183 | 10 | 133 | 4.18e-16 | 83.6 |
MS.gene37878.t1 | AT3G58240 | 33.333 | 132 | 86 | 2 | 53 | 183 | 3 | 133 | 5.42e-16 | 80.9 |
MS.gene37878.t1 | AT1G04300 | 42.241 | 116 | 60 | 5 | 76 | 188 | 68 | 179 | 2.12e-15 | 82.0 |
MS.gene37878.t1 | AT2G42460 | 38.462 | 130 | 76 | 3 | 59 | 187 | 10 | 136 | 3.87e-15 | 78.2 |
MS.gene37878.t1 | AT4G09780 | 31.447 | 159 | 96 | 4 | 38 | 183 | 194 | 352 | 4.80e-15 | 79.3 |
MS.gene37878.t1 | AT4G09770 | 32.298 | 161 | 98 | 5 | 38 | 195 | 140 | 292 | 1.01e-14 | 76.6 |
MS.gene37878.t1 | AT4G09770 | 32.298 | 161 | 98 | 5 | 38 | 195 | 140 | 292 | 1.01e-14 | 76.6 |
MS.gene37878.t1 | AT4G24560 | 25.962 | 312 | 188 | 15 | 201 | 487 | 542 | 835 | 1.47e-14 | 79.3 |
MS.gene37878.t1 | AT4G09770 | 32.298 | 161 | 98 | 5 | 38 | 195 | 166 | 318 | 1.54e-14 | 76.6 |
MS.gene37878.t1 | AT5G46740 | 27.523 | 218 | 134 | 8 | 279 | 487 | 46 | 248 | 3.52e-14 | 77.4 |
MS.gene37878.t1 | AT4G17895 | 25.733 | 307 | 180 | 13 | 201 | 482 | 176 | 459 | 5.53e-14 | 77.0 |
MS.gene37878.t1 | AT4G01390 | 33.548 | 155 | 94 | 5 | 40 | 189 | 149 | 299 | 5.73e-14 | 74.7 |
MS.gene37878.t1 | AT3G58290 | 37.255 | 102 | 52 | 3 | 48 | 138 | 1 | 101 | 3.38e-13 | 71.6 |
MS.gene37878.t1 | AT2G05410 | 38.614 | 101 | 59 | 2 | 89 | 187 | 1 | 100 | 6.01e-13 | 70.9 |
MS.gene37878.t1 | AT3G29580 | 32.558 | 129 | 82 | 3 | 57 | 182 | 7 | 133 | 7.37e-13 | 71.2 |
MS.gene37878.t1 | AT5G26320 | 31.206 | 141 | 86 | 4 | 52 | 183 | 57 | 195 | 8.50e-13 | 71.6 |
MS.gene37878.t1 | AT5G26280 | 28.378 | 148 | 99 | 3 | 43 | 183 | 46 | 193 | 1.44e-12 | 70.9 |
MS.gene37878.t1 | AT5G26260 | 29.861 | 144 | 94 | 3 | 47 | 183 | 51 | 194 | 2.06e-12 | 70.5 |
MS.gene37878.t1 | AT2G42475 | 36.434 | 129 | 75 | 5 | 51 | 177 | 1 | 124 | 2.15e-12 | 70.5 |
MS.gene37878.t1 | AT3G58280 | 31.818 | 110 | 72 | 2 | 79 | 188 | 29 | 135 | 2.79e-12 | 69.3 |
MS.gene37878.t1 | AT4G00780 | 33.548 | 155 | 94 | 5 | 40 | 189 | 148 | 298 | 4.46e-12 | 68.9 |
MS.gene37878.t1 | AT3G58380 | 28.244 | 131 | 93 | 1 | 58 | 187 | 8 | 138 | 4.57e-12 | 68.9 |
MS.gene37878.t1 | AT3G46190 | 31.034 | 145 | 96 | 2 | 39 | 183 | 163 | 303 | 5.77e-12 | 68.6 |
MS.gene37878.t1 | AT3G20370 | 30.935 | 139 | 81 | 6 | 43 | 170 | 50 | 184 | 7.52e-12 | 68.9 |
MS.gene37878.t1 | AT3G20370 | 30.935 | 139 | 81 | 6 | 43 | 170 | 72 | 206 | 8.28e-12 | 68.9 |
MS.gene37878.t1 | AT3G46190 | 31.034 | 145 | 96 | 2 | 39 | 183 | 143 | 283 | 9.14e-12 | 67.8 |
MS.gene37878.t1 | AT5G26280 | 31.858 | 113 | 72 | 2 | 76 | 183 | 100 | 212 | 1.05e-11 | 68.6 |
MS.gene37878.t1 | AT1G58270 | 30.714 | 140 | 88 | 3 | 59 | 195 | 254 | 387 | 2.10e-11 | 67.8 |
MS.gene37878.t1 | AT3G22080 | 27.397 | 146 | 94 | 4 | 38 | 171 | 1 | 146 | 5.32e-11 | 65.9 |
Find 239 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTACAGCAAATTCAGAATTT+TGG | 0.124418 | 5.3:-69806325 | MS.gene37878:intron |
AAGATATTGCTGAGCATTTA+AGG | 0.152035 | 5.3:-69811831 | MS.gene37878:CDS |
TTCTCACAGTGTACTTATTA+TGG | 0.159654 | 5.3:+69818443 | None:intergenic |
TCCACAGTGTTGGCGGTTTC+AGG | 0.181720 | 5.3:+69818911 | None:intergenic |
CATGTAAGCATTTGAATATT+TGG | 0.186742 | 5.3:+69811909 | None:intergenic |
CGCGGTTCCGCATGCGGATT+TGG | 0.211357 | 5.3:-69820653 | MS.gene37878:CDS |
GGACTATTTGTCCATGTATT+TGG | 0.214565 | 5.3:-69818542 | MS.gene37878:CDS |
GAATATTTGGTGAATTTAAA+AGG | 0.223359 | 5.3:+69811922 | None:intergenic |
TCCGTAGGATTGTTGATTAC+TGG | 0.243989 | 5.3:-69817563 | MS.gene37878:CDS |
GCTCCTCCATTGCCCGTTTA+GGG | 0.245382 | 5.3:+69812094 | None:intergenic |
CTTAGCAAGGTTAAATAAAA+TGG | 0.260792 | 5.3:-69808942 | MS.gene37878:CDS |
CTCCTACAGTGCTTTGCTTT+GGG | 0.266312 | 5.3:+69807331 | None:intergenic |
TAGTCCACATTGTTCCCTTT+TGG | 0.278526 | 5.3:+69818559 | None:intergenic |
AGCCTGACCTTTCGGAAATA+AGG | 0.283888 | 5.3:+69817444 | None:intergenic |
TGCTCCTCCATTGCCCGTTT+AGG | 0.285036 | 5.3:+69812093 | None:intergenic |
CATCTTCCTTTGGTTTATCT+AGG | 0.286963 | 5.3:+69808043 | None:intergenic |
CTGTACAATTCCAGCGCTTT+TGG | 0.291139 | 5.3:-69809926 | MS.gene37878:CDS |
GTGTGGGGTGAGCCTGATTT+TGG | 0.302835 | 5.3:+69807834 | None:intergenic |
AAAGAGCTGACAAAATCTTT+TGG | 0.307298 | 5.3:-69817223 | MS.gene37878:CDS |
TACTTGATAGGCTGGGGTTT+TGG | 0.314921 | 5.3:+69807793 | None:intergenic |
GATACCTTGAAAACGTTAAA+TGG | 0.315683 | 5.3:+69810578 | None:intergenic |
TCCTGATGTGCCTTCTTACT+TGG | 0.321434 | 5.3:-69808341 | MS.gene37878:CDS |
TCTCCTACAGTGCTTTGCTT+TGG | 0.335296 | 5.3:+69807330 | None:intergenic |
TGACTTTATGCGGGATACTA+TGG | 0.341738 | 5.3:-69814912 | MS.gene37878:CDS |
AAAAGGAGTGTTATTGAATC+CGG | 0.344010 | 5.3:+69811939 | None:intergenic |
GATTTCCCCTCCCAGCGTTC+TGG | 0.345411 | 5.3:-69813494 | MS.gene37878:intron |
AGGCAGAAGTCATCTTCCTT+TGG | 0.347507 | 5.3:+69808033 | None:intergenic |
TGCTGAACAATATGGTTTGC+AGG | 0.347604 | 5.3:-69816666 | MS.gene37878:intron |
TATTGTAGGTTGTTCACTTT+CGG | 0.351875 | 5.3:-69808068 | MS.gene37878:intron |
ATTTGTGTCAATGGCCGATT+AGG | 0.352208 | 5.3:+69809870 | None:intergenic |
AAATACCATGCTGAACAATA+TGG | 0.352319 | 5.3:-69816674 | MS.gene37878:CDS |
TATTCAGATGTATTTGTTGT+TGG | 0.357395 | 5.3:-69818812 | MS.gene37878:CDS |
ATTCAGATGTATTTGTTGTT+GGG | 0.358987 | 5.3:-69818811 | MS.gene37878:CDS |
AATGTTAATTTCTTGTCAAT+AGG | 0.359284 | 5.3:+69808525 | None:intergenic |
AAGATCATATGCTGCTAATC+AGG | 0.362054 | 5.3:-69805792 | MS.gene37878:CDS |
TTCACATCCTTCATGCCTCT+TGG | 0.370593 | 5.3:-69817654 | MS.gene37878:CDS |
AAAACATAAATGATCAATAC+TGG | 0.377208 | 5.3:-69806715 | MS.gene37878:CDS |
AGCAACCTAAGCTCAGTATC+AGG | 0.383002 | 5.3:+69806993 | None:intergenic |
GTCTTCTCAGGTGGTGCAAT+CGG | 0.383892 | 5.3:+69809154 | None:intergenic |
CCCCTCGGTACTTGATAGGC+TGG | 0.387609 | 5.3:+69807785 | None:intergenic |
GCAATCTTTACACACTTCAT+AGG | 0.390701 | 5.3:-69814087 | MS.gene37878:intron |
TAAAGTCCAATCTCTTCTTC+AGG | 0.392869 | 5.3:+69808908 | None:intergenic |
ATATCATCCTTTGTCTTCTC+AGG | 0.393483 | 5.3:+69809142 | None:intergenic |
TCACCTCTACACTATTATAA+AGG | 0.410063 | 5.3:-69810866 | MS.gene37878:intron |
CCCTCGGTACTTGATAGGCT+GGG | 0.411961 | 5.3:+69807786 | None:intergenic |
TCAATGCACGGGAAAGTGAC+TGG | 0.413176 | 5.3:-69817680 | MS.gene37878:CDS |
GCAATATGGTGGTGAGGAAG+AGG | 0.416940 | 5.3:-69812073 | MS.gene37878:intron |
AGTAGCTGAACAACTTGGTT+TGG | 0.417406 | 5.3:-69807866 | MS.gene37878:CDS |
CAACACTGGTGTCACTATAC+TGG | 0.417565 | 5.3:+69817251 | None:intergenic |
CCCTTTGATGGCAGTTATGT+TGG | 0.420767 | 5.3:-69809004 | MS.gene37878:intron |
TGACAAAAGAAGACCCTAAA+CGG | 0.421353 | 5.3:-69812107 | MS.gene37878:CDS |
AGAAGAGATTGGACTTTATG+AGG | 0.423419 | 5.3:-69808903 | MS.gene37878:intron |
AATCAGGTTAGTAACTTTGC+TGG | 0.424913 | 5.3:-69805776 | MS.gene37878:CDS |
ATCTTCCTTTGGTTTATCTA+GGG | 0.427379 | 5.3:+69808044 | None:intergenic |
AGAACAAACTTTGCAGAGCC+AGG | 0.428594 | 5.3:+69817281 | None:intergenic |
GCTTCCTCAATTTGTGTCAA+TGG | 0.429761 | 5.3:+69809861 | None:intergenic |
CCGGAGGAAAATCGATGAAC+AGG | 0.434336 | 5.3:+69814966 | None:intergenic |
ATTCTCCATGTGAATCTTGA+TGG | 0.434730 | 5.3:+69818869 | None:intergenic |
AGATATTGCTGAGCATTTAA+GGG | 0.439270 | 5.3:-69811830 | MS.gene37878:intron |
ACCATACATATCGTCCTAAT+CGG | 0.439597 | 5.3:-69809884 | MS.gene37878:CDS |
TTCAGCTGAAGCTGCAAGAC+CGG | 0.439731 | 5.3:+69814947 | None:intergenic |
TCCAAGTAAGAAGGCACATC+AGG | 0.444510 | 5.3:+69808340 | None:intergenic |
CGGGCAATGGAGGAGCAATA+TGG | 0.445556 | 5.3:-69812087 | MS.gene37878:CDS |
TGGACGACCCATCCAAAATC+AGG | 0.448812 | 5.3:-69807846 | MS.gene37878:CDS |
GATGGTGAAGGATCCTCAAC+AGG | 0.449558 | 5.3:+69818887 | None:intergenic |
ATCTATCACCTGATGCTGAT+AGG | 0.452444 | 5.3:-69814117 | MS.gene37878:CDS |
TCCACCCCTCGGTACTTGAT+AGG | 0.456088 | 5.3:+69807781 | None:intergenic |
GAAGAGACGTATATGGTGCC+TGG | 0.458856 | 5.3:-69805856 | MS.gene37878:CDS |
ACCTTGACAAACTCATCGTC+TGG | 0.460568 | 5.3:+69806223 | None:intergenic |
GGTGCCTGGGAGCAGTATCT+TGG | 0.463110 | 5.3:-69805842 | MS.gene37878:CDS |
TGACAGAGAAGAGACGTATA+TGG | 0.464091 | 5.3:-69805863 | MS.gene37878:intron |
TACCGTAGCTCCTCTTTCTC+AGG | 0.468503 | 5.3:+69809094 | None:intergenic |
CACTATACTCACTTCATCCT+TGG | 0.468835 | 5.3:+69807552 | None:intergenic |
TATGATCCTGAAGAAGAGAT+TGG | 0.473570 | 5.3:-69808914 | MS.gene37878:CDS |
GTGGCACGAGATGAAGATCT+TGG | 0.476365 | 5.3:-69810680 | MS.gene37878:CDS |
ATTAACATTTCGAGCAAGCC+AGG | 0.480714 | 5.3:-69808511 | MS.gene37878:intron |
AAGAGTGAGGTTACGTCAAT+CGG | 0.480934 | 5.3:+69821063 | None:intergenic |
GCCGATTAGGACGATATGTA+TGG | 0.481513 | 5.3:+69809883 | None:intergenic |
TCTAATGAGCTTACATCTCC+AGG | 0.482490 | 5.3:+69808013 | None:intergenic |
ATAGGCTCACACATCACGTT+TGG | 0.484356 | 5.3:+69808543 | None:intergenic |
TTGTTGTTGGGAGTTACAAA+TGG | 0.484541 | 5.3:-69818799 | MS.gene37878:intron |
GAAGATCTTGGAGAACAGAT+TGG | 0.486177 | 5.3:-69810668 | MS.gene37878:CDS |
GTTATATGATCCTGAGAAAG+AGG | 0.486614 | 5.3:-69809104 | MS.gene37878:CDS |
GAAGAGGTTGCTAAAGAGTT+CGG | 0.489408 | 5.3:-69809954 | MS.gene37878:CDS |
GTTGAAGTTGAACGTCTTGA+GGG | 0.492297 | 5.3:-69816704 | MS.gene37878:CDS |
CCGTGAATGCAGCTTGAAGA+TGG | 0.493627 | 5.3:-69808421 | MS.gene37878:intron |
GCAAGGTTAAATAAAATGGC+TGG | 0.494326 | 5.3:-69808938 | MS.gene37878:CDS |
GGCATATCATTCTCTGTTGT+AGG | 0.494452 | 5.3:+69817319 | None:intergenic |
AATAAGTACACTGTGAGAAA+AGG | 0.495525 | 5.3:-69818439 | MS.gene37878:intron |
AAAGGAGTGTTATTGAATCC+GGG | 0.495744 | 5.3:+69811940 | None:intergenic |
AACAGGCTCCACAGTGTTGG+CGG | 0.498367 | 5.3:+69818904 | None:intergenic |
ACTATTCAGAAATTGTTTGA+AGG | 0.499666 | 5.3:-69817012 | MS.gene37878:CDS |
GGAGAGGTTAAAGAAAGAAC+AGG | 0.500215 | 5.3:-69810926 | MS.gene37878:CDS |
CTGGGAGCAGTATCTTGGCT+TGG | 0.500471 | 5.3:-69805837 | MS.gene37878:CDS |
CGGACATTCCTATCAGCATC+AGG | 0.502525 | 5.3:+69814109 | None:intergenic |
GGAATATGTGCACAATCGCC+AGG | 0.502785 | 5.3:-69808320 | MS.gene37878:intron |
TCAAAGGAAGCATAAACATC+AGG | 0.504903 | 5.3:+69816734 | None:intergenic |
TGCTCCTCATTATCCGTAGC+AGG | 0.506305 | 5.3:+69808373 | None:intergenic |
AAAAGGAGACTGGATATGTT+GGG | 0.510809 | 5.3:-69817527 | MS.gene37878:CDS |
GACAAAAGAAGACCCTAAAC+GGG | 0.510912 | 5.3:-69812106 | MS.gene37878:CDS |
TGTTGAAGTTGAACGTCTTG+AGG | 0.511531 | 5.3:-69816705 | MS.gene37878:CDS |
TTGCCCAAAGCCAAAAGCGC+TGG | 0.513860 | 5.3:+69809916 | None:intergenic |
TTTGGAAGTGGAGCGTGGAC+CGG | 0.515148 | 5.3:-69809276 | MS.gene37878:intron |
ATCCCTCTGCCAGAATTACA+AGG | 0.515348 | 5.3:-69807610 | MS.gene37878:CDS |
GCCGCACGCGGTTCCGCATG+CGG | 0.515972 | 5.3:-69820659 | MS.gene37878:CDS |
CAATGCACGGGAAAGTGACT+GGG | 0.517515 | 5.3:-69817679 | MS.gene37878:CDS |
ACACGTGGATTAGACGATCA+TGG | 0.518212 | 5.3:+69806478 | None:intergenic |
TATGCTCGTTCACTACAATC+AGG | 0.520033 | 5.3:-69807746 | MS.gene37878:intron |
CAGTTACCACAGACAAATCC+CGG | 0.520297 | 5.3:-69811958 | MS.gene37878:CDS |
GCTTTGCTTTGGGAGTCTGA+TGG | 0.521563 | 5.3:+69807341 | None:intergenic |
AAAGGAAGATGACTTCTGCC+TGG | 0.521922 | 5.3:-69808031 | MS.gene37878:CDS |
TGCACTCGATGTAGTTCATA+TGG | 0.522812 | 5.3:+69816986 | None:intergenic |
CTCGTCCTGATACTGAGCTT+AGG | 0.523216 | 5.3:-69806998 | MS.gene37878:CDS |
AAACCTTGTAATTCTGGCAG+AGG | 0.523544 | 5.3:+69807607 | None:intergenic |
GAGGTTACGTCAATCGGAGC+AGG | 0.523979 | 5.3:+69821069 | None:intergenic |
CACGTGGATTAGACGATCAT+GGG | 0.524119 | 5.3:+69806479 | None:intergenic |
GTTCAGGCAACTGTCGTTGA+GGG | 0.524541 | 5.3:-69817036 | MS.gene37878:intron |
AGACACTACTCAGAACCAAA+TGG | 0.526141 | 5.3:-69806442 | MS.gene37878:intron |
ATATGTTGGGCTTAAGAACC+AGG | 0.528339 | 5.3:-69817514 | MS.gene37878:CDS |
GTTGAGAATAGCAGTTGTGT+GGG | 0.529254 | 5.3:+69807818 | None:intergenic |
CTATTCAGAAATTGTTTGAA+GGG | 0.531110 | 5.3:-69817011 | MS.gene37878:CDS |
TAGATATGCACAGTTTAGCT+TGG | 0.531238 | 5.3:-69818482 | MS.gene37878:CDS |
CAAAAGCGCTGGAATTGTAC+AGG | 0.531856 | 5.3:+69809927 | None:intergenic |
GTTCACAGTGGTGGTGTGCA+TGG | 0.533539 | 5.3:-69813472 | MS.gene37878:CDS |
TCCGCATGCGGAACCGCGTG+CGG | 0.534554 | 5.3:+69820658 | None:intergenic |
CAATTCACCAAGAGGCATGA+AGG | 0.535350 | 5.3:+69817647 | None:intergenic |
GGCTCCTGCTACGGATAATG+AGG | 0.536307 | 5.3:-69808377 | MS.gene37878:CDS |
CGATCAAGATCAAGTTGCAA+TGG | 0.536998 | 5.3:+69814154 | None:intergenic |
AACCTTGCTAAGATTTCTGA+TGG | 0.537381 | 5.3:+69808953 | None:intergenic |
AACAAACTTTGCAGAGCCAG+GGG | 0.537595 | 5.3:+69817283 | None:intergenic |
TCATCCTTTGTCTTCTCAGG+TGG | 0.539767 | 5.3:+69809145 | None:intergenic |
GATTTGAATATGACTTTATG+CGG | 0.540156 | 5.3:-69814922 | MS.gene37878:CDS |
CCTCGGTACTTGATAGGCTG+GGG | 0.540177 | 5.3:+69807787 | None:intergenic |
AGAAGACCCTAAACGGGCAA+TGG | 0.541064 | 5.3:-69812100 | MS.gene37878:CDS |
GATCTTCAACTTGATGTCAA+AGG | 0.541747 | 5.3:-69816761 | MS.gene37878:CDS |
ATCTGCAACATCCAAATACA+TGG | 0.541837 | 5.3:+69818531 | None:intergenic |
CTTGATCTTGATCGTGACAA+TGG | 0.544545 | 5.3:-69814145 | MS.gene37878:CDS |
CTTTCAGAAGGCTCCTGCTA+CGG | 0.547214 | 5.3:-69808386 | MS.gene37878:CDS |
TGCACATATTCCAAGTAAGA+AGG | 0.547368 | 5.3:+69808331 | None:intergenic |
TTCATAAGATACCCTCTACT+AGG | 0.549694 | 5.3:+69817618 | None:intergenic |
TTGAAGTTGAACGTCTTGAG+GGG | 0.553237 | 5.3:-69816703 | MS.gene37878:CDS |
TATGCGGGATACTATGGTAA+AGG | 0.553596 | 5.3:-69814906 | MS.gene37878:intron |
GCTTTGGGAGTCTGATGGTG+TGG | 0.558257 | 5.3:+69807346 | None:intergenic |
TTTCACATATGATGATGTTG+TGG | 0.559521 | 5.3:-69807893 | MS.gene37878:CDS |
AGCGTTCTGGTTCACAGTGG+TGG | 0.559857 | 5.3:-69813481 | MS.gene37878:CDS |
ACAGAGAATGATATGCCCTC+TGG | 0.560183 | 5.3:-69817313 | MS.gene37878:CDS |
ATTTGAATATGACTTTATGC+GGG | 0.561555 | 5.3:-69814921 | MS.gene37878:CDS |
GAACAAACTTTGCAGAGCCA+GGG | 0.564249 | 5.3:+69817282 | None:intergenic |
GAGAGAGTAGCTGAACAACT+TGG | 0.567724 | 5.3:-69807871 | MS.gene37878:CDS |
CGCAGCATCAGTTCAATGCA+CGG | 0.568279 | 5.3:-69817692 | MS.gene37878:CDS |
GTATATACGTGAAGCGGACA+AGG | 0.568613 | 5.3:-69811881 | MS.gene37878:CDS |
ATACAACTTCAGAGTCCTCA+AGG | 0.568662 | 5.3:+69806015 | None:intergenic |
TCATATTCCTTATTTCCGAA+AGG | 0.568714 | 5.3:-69817451 | MS.gene37878:intron |
CAACTAGTCTGCCCTACGGT+TGG | 0.569646 | 5.3:-69818507 | MS.gene37878:CDS |
AAGAGACGTATATGGTGCCT+GGG | 0.569774 | 5.3:-69805855 | MS.gene37878:CDS |
TGTTGAGAATAGCAGTTGTG+TGG | 0.569965 | 5.3:+69807817 | None:intergenic |
AACTTCAACATATTTGTCAA+AGG | 0.572460 | 5.3:+69816718 | None:intergenic |
ATCCTGAGAAAGAGGAGCTA+CGG | 0.572589 | 5.3:-69809096 | MS.gene37878:intron |
GAAAGAGATTGCTACCTCCT+CGG | 0.573364 | 5.3:+69806682 | None:intergenic |
CATACACGAATGTGAGACTT+TGG | 0.575576 | 5.3:-69806284 | MS.gene37878:CDS |
CTCAACAGGCTCCACAGTGT+TGG | 0.575994 | 5.3:+69818901 | None:intergenic |
AACCTTGTAATTCTGGCAGA+GGG | 0.576300 | 5.3:+69807608 | None:intergenic |
AAAACTTGAAGACAAAATGA+AGG | 0.577785 | 5.3:-69817137 | MS.gene37878:intron |
GGTACAAATTTGATGATGAG+AGG | 0.578779 | 5.3:-69812131 | MS.gene37878:CDS |
TACTCTTATAATTGAAGCCG+AGG | 0.580435 | 5.3:-69817592 | MS.gene37878:CDS |
TGTTCAGGCAACTGTCGTTG+AGG | 0.582261 | 5.3:-69817037 | MS.gene37878:intron |
CAGATAAATGTTCCACCCCT+CGG | 0.582634 | 5.3:+69807770 | None:intergenic |
CAACACTGTGGAGCCTGTTG+AGG | 0.583424 | 5.3:-69818900 | MS.gene37878:CDS |
ATATTCAAATGCTTACATGC+TGG | 0.583488 | 5.3:-69811905 | MS.gene37878:CDS |
CCCAGCCTATCAAGTACCGA+GGG | 0.583532 | 5.3:-69807786 | MS.gene37878:CDS |
TCATATAGCATGTAGCTCCC+TGG | 0.584269 | 5.3:+69817496 | None:intergenic |
CGATAGATAATACCATCCAT+TGG | 0.585242 | 5.3:+69820610 | None:intergenic |
CTCCCAAAGCAAAGCACTGT+AGG | 0.585482 | 5.3:-69807333 | MS.gene37878:CDS |
TTGAATCCGGGATTTGTCTG+TGG | 0.586663 | 5.3:+69811952 | None:intergenic |
TCAGAGTCCTCAAGGTACTC+AGG | 0.587164 | 5.3:+69806023 | None:intergenic |
AATAATCATCAACCAATGGA+TGG | 0.590226 | 5.3:-69820622 | MS.gene37878:intron |
GGAAACTCCGCACTTTGTCA+TGG | 0.590348 | 5.3:+69810618 | None:intergenic |
AGACCCTAAACGGGCAATGG+AGG | 0.590791 | 5.3:-69812097 | MS.gene37878:CDS |
TCCAGTAATCAACAATCCTA+CGG | 0.593567 | 5.3:+69817562 | None:intergenic |
AGATATTATATGCTTTCAGA+AGG | 0.593862 | 5.3:-69808398 | MS.gene37878:CDS |
TCGGCCATTGACACAAATTG+AGG | 0.594021 | 5.3:-69809865 | MS.gene37878:CDS |
AAGCCGAGGTCCTTGTCCGT+AGG | 0.594681 | 5.3:-69817578 | MS.gene37878:CDS |
GCAGCATCAGTTCAATGCAC+GGG | 0.596900 | 5.3:-69817691 | MS.gene37878:CDS |
TCCAGACGATGAGTTTGTCA+AGG | 0.597360 | 5.3:-69806224 | MS.gene37878:intron |
GTACAAATTTGATGATGAGA+GGG | 0.599822 | 5.3:-69812130 | MS.gene37878:CDS |
CTTCACCATCAAGATTCACA+TGG | 0.602048 | 5.3:-69818874 | MS.gene37878:CDS |
TGCATATCTACTCCAACCGT+AGG | 0.603099 | 5.3:+69818495 | None:intergenic |
CTTTAGTAAAATGATACACG+TGG | 0.603666 | 5.3:+69806463 | None:intergenic |
GAACAATAATCATCAACCAA+TGG | 0.603852 | 5.3:-69820626 | MS.gene37878:CDS |
CAAGCCAAGATACTGCTCCC+AGG | 0.610930 | 5.3:+69805838 | None:intergenic |
CATTCTCTGTTGTAGGCATG+TGG | 0.612114 | 5.3:+69817326 | None:intergenic |
GCCTATCAAGTACCGAGGGG+TGG | 0.613647 | 5.3:-69807782 | MS.gene37878:CDS |
GAATTGTATGATCCTAGTAG+AGG | 0.616256 | 5.3:-69817630 | MS.gene37878:CDS |
CACAGTGGTGGTGTGCATGG+TGG | 0.617596 | 5.3:-69813469 | MS.gene37878:CDS |
GGACTATAAATCAACACGAA+AGG | 0.618503 | 5.3:-69816956 | MS.gene37878:CDS |
TCTTGGAGAACAGATTGGAA+AGG | 0.620139 | 5.3:-69810663 | MS.gene37878:CDS |
TGCGTTTCATCATGCTACCA+AGG | 0.622353 | 5.3:-69807569 | MS.gene37878:CDS |
AGACTCTTTGTGAACAACAC+TGG | 0.625132 | 5.3:-69808980 | MS.gene37878:CDS |
TTCTCAGCCAAATCCGCATG+CGG | 0.626749 | 5.3:+69820646 | None:intergenic |
AACCATCAGAAATCTTAGCA+AGG | 0.627786 | 5.3:-69808955 | MS.gene37878:CDS |
GCATATCTACTCCAACCGTA+GGG | 0.628168 | 5.3:+69818496 | None:intergenic |
AATTGTATGATCCTAGTAGA+GGG | 0.631770 | 5.3:-69817629 | MS.gene37878:CDS |
TTTGTAGCAACAACAGCAGG+AGG | 0.633116 | 5.3:-69820698 | MS.gene37878:intron |
AGCTGAAGCTGCAAGACCGG+AGG | 0.633804 | 5.3:+69814950 | None:intergenic |
GGCCGACTCTCTCTGATCAG+TGG | 0.636295 | 5.3:-69813426 | MS.gene37878:intron |
GGAGGAGCAATATGGTGGTG+AGG | 0.636914 | 5.3:-69812079 | MS.gene37878:CDS |
AATCCTACGGACAAGGACCT+CGG | 0.639665 | 5.3:+69817575 | None:intergenic |
TACTTCATAGTACAATATGT+CGG | 0.641200 | 5.3:+69807639 | None:intergenic |
GCAAACCATATTGTTCAGCA+TGG | 0.645378 | 5.3:+69816669 | None:intergenic |
AGAGATGCTTGTGCCGCACG+CGG | 0.646573 | 5.3:-69820671 | MS.gene37878:CDS |
AATCAACAATCCTACGGACA+AGG | 0.650687 | 5.3:+69817568 | None:intergenic |
TATGAAGTGTGTAAAGATTG+CGG | 0.652145 | 5.3:+69814089 | None:intergenic |
ATACTGGACACTACGAGCCG+AGG | 0.654398 | 5.3:-69806699 | MS.gene37878:CDS |
CCCCAGCCTATCAAGTACCG+AGG | 0.655681 | 5.3:-69807787 | MS.gene37878:CDS |
CACTGTAGGAGATGTCCTTG+AGG | 0.656432 | 5.3:-69807319 | MS.gene37878:CDS |
ACACCTTTATAATAGTGTAG+AGG | 0.656703 | 5.3:+69810863 | None:intergenic |
GCTGGTGTATATACGTGAAG+CGG | 0.658117 | 5.3:-69811887 | MS.gene37878:CDS |
TTGTAGACCATGACAAAGTG+CGG | 0.658674 | 5.3:-69810625 | MS.gene37878:CDS |
CTGGACACTACGAGCCGAGG+AGG | 0.660468 | 5.3:-69806696 | MS.gene37878:intron |
TTGAGAATAGCAGTTGTGTG+GGG | 0.660587 | 5.3:+69807819 | None:intergenic |
TGAAGTTGAACGTCTTGAGG+GGG | 0.668130 | 5.3:-69816702 | MS.gene37878:CDS |
TCGGTCCCTAGATAAACCAA+AGG | 0.670139 | 5.3:-69808049 | MS.gene37878:CDS |
TACCACTGATCAGAGAGAGT+CGG | 0.670322 | 5.3:+69813424 | None:intergenic |
AGGGCGTCCTGAGTACCTTG+AGG | 0.672202 | 5.3:-69806030 | MS.gene37878:CDS |
AAGAAGGCACATCAGGATAG+CGG | 0.672277 | 5.3:+69808347 | None:intergenic |
GCAATGGAGGAGCAATATGG+TGG | 0.673604 | 5.3:-69812084 | MS.gene37878:CDS |
GGATCATACAATTCACCAAG+AGG | 0.677963 | 5.3:+69817639 | None:intergenic |
ATTGAGAGAGATATCGAACA+AGG | 0.683338 | 5.3:-69809324 | MS.gene37878:CDS |
ACCTGAAACCGCCAACACTG+TGG | 0.685308 | 5.3:-69818912 | MS.gene37878:CDS |
GATTCAACTAGTCTGCCCTA+CGG | 0.687256 | 5.3:-69818511 | MS.gene37878:CDS |
TGCACCACCTGAGAAGACAA+AGG | 0.690536 | 5.3:-69809149 | MS.gene37878:CDS |
CTACATCGAGTGCATCAATG+TGG | 0.692185 | 5.3:-69816977 | MS.gene37878:CDS |
CATGTGAATCTTGATGGTGA+AGG | 0.695438 | 5.3:+69818875 | None:intergenic |
TATGTTGGGCTTAAGAACCA+GGG | 0.701641 | 5.3:-69817513 | MS.gene37878:CDS |
ACGTGGATTAGACGATCATG+GGG | 0.702245 | 5.3:+69806480 | None:intergenic |
AATGCACGGGAAAGTGACTG+GGG | 0.703427 | 5.3:-69817678 | MS.gene37878:CDS |
CCCAGCGTTCTGGTTCACAG+TGG | 0.725867 | 5.3:-69813484 | MS.gene37878:intron |
ACAAACTTTGCAGAGCCAGG+GGG | 0.728959 | 5.3:+69817284 | None:intergenic |
CCAGCCTATCAAGTACCGAG+GGG | 0.766069 | 5.3:-69807785 | MS.gene37878:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 69805757 | 69821097 | 69805757 | ID=MS.gene37878 |
chr5.3 | mRNA | 69805757 | 69821097 | 69805757 | ID=MS.gene37878.t1;Parent=MS.gene37878 |
chr5.3 | exon | 69821077 | 69821097 | 69821077 | ID=MS.gene37878.t1.exon1;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69821077 | 69821097 | 69821077 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69820623 | 69820713 | 69820623 | ID=MS.gene37878.t1.exon2;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69820623 | 69820713 | 69820623 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69818800 | 69818944 | 69818800 | ID=MS.gene37878.t1.exon3;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69818800 | 69818944 | 69818800 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69818440 | 69818597 | 69818440 | ID=MS.gene37878.t1.exon4;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69818440 | 69818597 | 69818440 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69817452 | 69817717 | 69817452 | ID=MS.gene37878.t1.exon5;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69817452 | 69817717 | 69817452 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69817138 | 69817356 | 69817138 | ID=MS.gene37878.t1.exon6;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69817138 | 69817356 | 69817138 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69816944 | 69817052 | 69816944 | ID=MS.gene37878.t1.exon7;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69816944 | 69817052 | 69816944 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69816667 | 69816782 | 69816667 | ID=MS.gene37878.t1.exon8;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69816667 | 69816782 | 69816667 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69814907 | 69815005 | 69814907 | ID=MS.gene37878.t1.exon9;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69814907 | 69815005 | 69814907 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69814088 | 69814197 | 69814088 | ID=MS.gene37878.t1.exon10;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69814088 | 69814197 | 69814088 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69813427 | 69813501 | 69813427 | ID=MS.gene37878.t1.exon11;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69813427 | 69813501 | 69813427 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69812074 | 69812152 | 69812074 | ID=MS.gene37878.t1.exon12;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69812074 | 69812152 | 69812074 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69811831 | 69811977 | 69811831 | ID=MS.gene37878.t1.exon13;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69811831 | 69811977 | 69811831 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69810867 | 69810947 | 69810867 | ID=MS.gene37878.t1.exon14;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69810867 | 69810947 | 69810867 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69810583 | 69810702 | 69810583 | ID=MS.gene37878.t1.exon15;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69810583 | 69810702 | 69810583 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69809854 | 69809976 | 69809854 | ID=MS.gene37878.t1.exon16;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69809854 | 69809976 | 69809854 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69809277 | 69809354 | 69809277 | ID=MS.gene37878.t1.exon17;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69809277 | 69809354 | 69809277 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69809097 | 69809185 | 69809097 | ID=MS.gene37878.t1.exon18;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69809097 | 69809185 | 69809097 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69808904 | 69809012 | 69808904 | ID=MS.gene37878.t1.exon19;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69808904 | 69809012 | 69808904 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69808512 | 69808580 | 69808512 | ID=MS.gene37878.t1.exon20;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69808512 | 69808580 | 69808512 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69808321 | 69808431 | 69808321 | ID=MS.gene37878.t1.exon21;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69808321 | 69808431 | 69808321 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69808027 | 69808082 | 69808027 | ID=MS.gene37878.t1.exon22;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69808027 | 69808082 | 69808027 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69807747 | 69807924 | 69807747 | ID=MS.gene37878.t1.exon23;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69807747 | 69807924 | 69807747 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69807564 | 69807665 | 69807564 | ID=MS.gene37878.t1.exon24;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69807564 | 69807665 | 69807564 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69807305 | 69807376 | 69807305 | ID=MS.gene37878.t1.exon25;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69807305 | 69807376 | 69807305 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69806965 | 69807030 | 69806965 | ID=MS.gene37878.t1.exon26;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69806965 | 69807030 | 69806965 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69806697 | 69806762 | 69806697 | ID=MS.gene37878.t1.exon27;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69806697 | 69806762 | 69806697 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69806443 | 69806529 | 69806443 | ID=MS.gene37878.t1.exon28;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69806443 | 69806529 | 69806443 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69806225 | 69806341 | 69806225 | ID=MS.gene37878.t1.exon29;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69806225 | 69806341 | 69806225 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69806001 | 69806075 | 69806001 | ID=MS.gene37878.t1.exon30;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69806001 | 69806075 | 69806001 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
chr5.3 | exon | 69805757 | 69805879 | 69805757 | ID=MS.gene37878.t1.exon31;Parent=MS.gene37878.t1 |
chr5.3 | CDS | 69805757 | 69805879 | 69805757 | ID=cds.MS.gene37878.t1;Parent=MS.gene37878.t1 |
Gene Sequence |
Protein sequence |