Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97340.t1 | AFK46547.1 | 93.8 | 224 | 13 | 1 | 1 | 224 | 1 | 223 | 2.90E-113 | 417.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97340.t1 | Q53B75 | 74.0 | 215 | 56 | 0 | 4 | 218 | 2 | 216 | 1.3e-88 | 327.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97340.t1 | I3T205 | 93.8 | 224 | 13 | 1 | 1 | 224 | 1 | 223 | 2.1e-113 | 417.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04921 | MS.gene97340 | 0.862376 | 5.30E-64 | -1.69E-46 |
| MS.gene050170 | MS.gene97340 | -0.828492 | 8.73E-55 | -1.69E-46 |
| MS.gene050338 | MS.gene97340 | 0.822899 | 1.85E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene97340 | 0.804686 | 1.92E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene97340 | 0.801583 | 8.41E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene97340 | 0.8076 | 4.67E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene97340 | 0.806202 | 9.22E-50 | -1.69E-46 |
| MS.gene051973 | MS.gene97340 | 0.800131 | 1.66E-48 | -1.69E-46 |
| MS.gene052494 | MS.gene97340 | 0.840795 | 7.01E-58 | -1.69E-46 |
| MS.gene052606 | MS.gene97340 | 0.827064 | 1.92E-54 | -1.69E-46 |
| MS.gene053097 | MS.gene97340 | 0.830482 | 2.86E-55 | -1.69E-46 |
| MS.gene054344 | MS.gene97340 | -0.817667 | 2.93E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene97340 | -0.838087 | 3.54E-57 | -1.69E-46 |
| MS.gene055251 | MS.gene97340 | 0.848992 | 4.30E-60 | -1.69E-46 |
| MS.gene055729 | MS.gene97340 | 0.802668 | 5.03E-49 | -1.69E-46 |
| MS.gene055731 | MS.gene97340 | 0.804585 | 2.01E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene97340 | -0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene97340 | -0.806369 | 8.51E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene97340 | -0.85009 | 2.13E-60 | -1.69E-46 |
| MS.gene055977 | MS.gene97340 | 0.801152 | 1.03E-48 | -1.69E-46 |
| MS.gene056266 | MS.gene97340 | -0.851059 | 1.14E-60 | -1.69E-46 |
| MS.gene056504 | MS.gene97340 | -0.801023 | 1.10E-48 | -1.69E-46 |
| MS.gene056694 | MS.gene97340 | 0.849238 | 3.68E-60 | -1.69E-46 |
| MS.gene056697 | MS.gene97340 | 0.835343 | 1.77E-56 | -1.69E-46 |
| MS.gene056856 | MS.gene97340 | 0.803679 | 3.11E-49 | -1.69E-46 |
| MS.gene056988 | MS.gene97340 | 0.804834 | 1.79E-49 | -1.69E-46 |
| MS.gene057607 | MS.gene97340 | 0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene057768 | MS.gene97340 | 0.802097 | 6.59E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene97340 | 0.821963 | 3.05E-53 | -1.69E-46 |
| MS.gene058382 | MS.gene97340 | 0.822254 | 2.61E-53 | -1.69E-46 |
| MS.gene05926 | MS.gene97340 | 0.805795 | 1.12E-49 | -1.69E-46 |
| MS.gene05960 | MS.gene97340 | 0.807992 | 3.86E-50 | -1.69E-46 |
| MS.gene060076 | MS.gene97340 | 0.827981 | 1.16E-54 | -1.69E-46 |
| MS.gene060405 | MS.gene97340 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene06084 | MS.gene97340 | 0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene97340 | -0.806984 | 6.31E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene97340 | 0.902816 | 6.58E-79 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97340.t1 | MTR_1g115850 | 93.304 | 224 | 14 | 1 | 1 | 224 | 1 | 223 | 1.29e-151 | 420 |
| MS.gene97340.t1 | MTR_1g115850 | 90.476 | 231 | 14 | 2 | 1 | 224 | 1 | 230 | 1.26e-148 | 413 |
| MS.gene97340.t1 | MTR_1g115840 | 88.739 | 222 | 25 | 0 | 5 | 226 | 4 | 225 | 4.93e-145 | 404 |
| MS.gene97340.t1 | MTR_1g115820 | 61.086 | 221 | 86 | 0 | 6 | 226 | 2 | 222 | 1.62e-94 | 276 |
| MS.gene97340.t1 | MTR_1g115820 | 61.446 | 166 | 64 | 0 | 6 | 171 | 2 | 167 | 3.93e-73 | 219 |
| MS.gene97340.t1 | MTR_1g115890 | 51.142 | 219 | 105 | 1 | 5 | 221 | 2 | 220 | 1.11e-71 | 218 |
| MS.gene97340.t1 | MTR_1g115870 | 49.057 | 212 | 106 | 1 | 9 | 218 | 6 | 217 | 1.69e-67 | 207 |
| MS.gene97340.t1 | MTR_1g115830 | 50.909 | 165 | 35 | 2 | 62 | 226 | 42 | 160 | 2.69e-48 | 156 |
| MS.gene97340.t1 | MTR_7g027135 | 44.776 | 134 | 72 | 1 | 52 | 183 | 7 | 140 | 1.56e-33 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97340.t1 | AT3G55120 | 49.761 | 209 | 105 | 0 | 9 | 217 | 16 | 224 | 1.59e-67 | 208 |
| MS.gene97340.t1 | AT5G66230 | 45.205 | 219 | 111 | 2 | 9 | 226 | 6 | 216 | 7.86e-53 | 178 |
| MS.gene97340.t1 | AT5G66220 | 45.783 | 166 | 89 | 1 | 62 | 226 | 2 | 167 | 3.95e-43 | 143 |
Find 62 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTAGAGAAGCCTTTA+AGG | 0.168675 | 1.2:+85874403 | MS.gene97340:CDS |
| TTCAGGTATTGTCTCATCTT+TGG | 0.255423 | 1.2:-85874590 | None:intergenic |
| GGTGGAGTTCATTGAATTTC+CGG | 0.261011 | 1.2:+85870165 | MS.gene97340:CDS |
| CAAACACCAAATGGAACATT+AGG | 0.304549 | 1.2:+85874464 | MS.gene97340:CDS |
| ATGTTCCTTCAGATTTCATA+TGG | 0.333432 | 1.2:-85874352 | None:intergenic |
| TCCTATTTCCTTGGTGGTGC+AGG | 0.335100 | 1.2:+85870217 | MS.gene97340:CDS |
| GCCTGCTTTGAAAGAGAGTT+TGG | 0.339202 | 1.2:+85874690 | MS.gene97340:CDS |
| TCTTTCAAAGCAGGCGAAAC+AGG | 0.349240 | 1.2:-85874682 | None:intergenic |
| ACCTGCACCACCAAGGAAAT+AGG | 0.361057 | 1.2:-85870218 | None:intergenic |
| TTTGTGAAGTTCACTGTATT+AGG | 0.371421 | 1.2:+85873732 | MS.gene97340:CDS |
| CACTGTATTAGGAGTTTACT+TGG | 0.384450 | 1.2:+85873743 | MS.gene97340:CDS |
| ATAACAGCATACTCATGTTC+AGG | 0.391503 | 1.2:-85874607 | None:intergenic |
| AAGATTGACGACTTCAACAT+TGG | 0.399504 | 1.2:+85874736 | MS.gene97340:CDS |
| TATAAACAACAAGCCGCTTT+CGG | 0.408427 | 1.2:+85874627 | MS.gene97340:CDS |
| AAACACCAAATGGAACATTA+GGG | 0.415014 | 1.2:+85874465 | MS.gene97340:CDS |
| CTAACCCCTAATGTTCCATT+TGG | 0.420625 | 1.2:-85874470 | None:intergenic |
| TTCTTCAGACAAACACCAAA+TGG | 0.421941 | 1.2:+85874455 | MS.gene97340:CDS |
| CACCTTCACTCCAGTGATCA+TGG | 0.422784 | 1.2:-85870146 | None:intergenic |
| GGCTTCTCTAAGTTCTTGAA+TGG | 0.424062 | 1.2:-85874396 | None:intergenic |
| GTGAGAGGGTTAGATATTGA+TGG | 0.425916 | 1.2:+85873705 | MS.gene97340:CDS |
| AGGAGTTTACTTGGAAGAAA+AGG | 0.434965 | 1.2:+85873752 | MS.gene97340:CDS |
| ACCAAGTCCTATTTCCTTGG+TGG | 0.442954 | 1.2:+85870211 | MS.gene97340:CDS |
| ATGAAATCTGAAGGAACATA+TGG | 0.443450 | 1.2:+85874356 | MS.gene97340:CDS |
| TCCACCAAGTCCTATTTCCT+TGG | 0.465024 | 1.2:+85870208 | MS.gene97340:CDS |
| GCCGCTTTCGGAGGCAGTGT+TGG | 0.468906 | 1.2:+85874639 | MS.gene97340:CDS |
| AAATAGGACTTGGTGGATGA+TGG | 0.479938 | 1.2:-85870202 | None:intergenic |
| GTTCATTGAATTTCCGGCAG+TGG | 0.480687 | 1.2:+85870171 | MS.gene97340:CDS |
| GATGGAGGTGTCACCACTGC+CGG | 0.484240 | 1.2:-85870184 | None:intergenic |
| AGGTAGTGAATATGTGAGAA+AGG | 0.489997 | 1.2:+85874310 | MS.gene97340:CDS |
| TGATATCTCGGTAGAAATCA+AGG | 0.490821 | 1.2:-85873833 | None:intergenic |
| GCCAAACTCTCTTTCAAAGC+AGG | 0.514705 | 1.2:-85874691 | None:intergenic |
| AACAGGAATTTCTCCGGTCA+TGG | 0.514747 | 1.2:-85874665 | None:intergenic |
| ACAAAGGTGAGAACACTAGA+AGG | 0.516764 | 1.2:+85874290 | MS.gene97340:CDS |
| AGGGATTCAAAGAGCTGAGA+TGG | 0.521295 | 1.2:-85873813 | None:intergenic |
| TGTTCCTTCAGATTTCATAT+GGG | 0.526558 | 1.2:-85874351 | None:intergenic |
| TGCTACCTTTGATGATATCT+CGG | 0.527385 | 1.2:-85873845 | None:intergenic |
| TAGCATCACTTACTCCTAAG+TGG | 0.528607 | 1.2:+85873778 | MS.gene97340:CDS |
| GCAGCAGCATCCATGATCAC+TGG | 0.535344 | 1.2:+85870136 | MS.gene97340:CDS |
| ACCAAGGAAATAGGACTTGG+TGG | 0.536120 | 1.2:-85870209 | None:intergenic |
| ATCACTTACTCCTAAGTGGA+AGG | 0.541188 | 1.2:+85873782 | MS.gene97340:CDS |
| ATCCATGATCACTGGAGTGA+AGG | 0.543867 | 1.2:+85870144 | MS.gene97340:CDS |
| GGAGTCTTGCCCTTCCACTT+AGG | 0.546270 | 1.2:-85873792 | None:intergenic |
| CTGAAGAAAACACCAGCCCC+TGG | 0.557559 | 1.2:-85874440 | None:intergenic |
| TAATGGTATGTAGGGGTGAG+AGG | 0.559143 | 1.2:+85873690 | MS.gene97340:intron |
| CATGATCACTGGAGTGAAGG+TGG | 0.559960 | 1.2:+85870147 | MS.gene97340:CDS |
| GCAGTGTTGGAGACCATGAC+CGG | 0.572482 | 1.2:+85874652 | MS.gene97340:CDS |
| AGGCGAAACAGGAATTTCTC+CGG | 0.576812 | 1.2:-85874671 | None:intergenic |
| GAAATTTATTCGATGTACAA+AGG | 0.580122 | 1.2:+85874274 | MS.gene97340:CDS |
| TCCAACACTGCCTCCGAAAG+CGG | 0.582725 | 1.2:-85874640 | None:intergenic |
| ACATCGAATAAATTTCTCAA+AGG | 0.583791 | 1.2:-85874267 | None:intergenic |
| AATGGTATGTAGGGGTGAGA+GGG | 0.586252 | 1.2:+85873691 | MS.gene97340:intron |
| TTCTACCGAGATATCATCAA+AGG | 0.592051 | 1.2:+85873840 | MS.gene97340:CDS |
| ACCACCAAGGAAATAGGACT+TGG | 0.610116 | 1.2:-85870212 | None:intergenic |
| ATTGCCCATATGAAATCTGA+AGG | 0.611017 | 1.2:+85874347 | MS.gene97340:CDS |
| AAACAACAAGCCGCTTTCGG+AGG | 0.621155 | 1.2:+85874630 | MS.gene97340:CDS |
| TAGGACTTGGTGGATGATGG+AGG | 0.628115 | 1.2:-85870199 | None:intergenic |
| GATATCTCGGTAGAAATCAA+GGG | 0.631456 | 1.2:-85873832 | None:intergenic |
| AAGAAAACACCAGCCCCTGG+TGG | 0.637698 | 1.2:-85874437 | None:intergenic |
| TCACTTACTCCTAAGTGGAA+GGG | 0.638389 | 1.2:+85873783 | MS.gene97340:CDS |
| AAGAAATACCTGCACCACCA+AGG | 0.648491 | 1.2:-85870225 | None:intergenic |
| ATAGCTATAAGCTATGGCAA+AGG | 0.662193 | 1.2:+85870114 | None:intergenic |
| AACACCAAATGGAACATTAG+GGG | 0.677472 | 1.2:+85874466 | MS.gene97340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTATTATTATTTTTT+GGG | - | chr1.2:85872922-85872941 | None:intergenic | 0.0% |
| !!! | TTTTTATTATTATTATTTTT+TGG | - | chr1.2:85872923-85872942 | None:intergenic | 0.0% |
| !! | AATTACAGATATAAAAAATA+AGG | + | chr1.2:85872716-85872735 | MS.gene97340:intron | 10.0% |
| !! | ATCAAAACTTTATAAAAAAA+AGG | + | chr1.2:85872258-85872277 | MS.gene97340:intron | 10.0% |
| !! | ATTACAGATATAAAAAATAA+GGG | + | chr1.2:85872717-85872736 | MS.gene97340:intron | 10.0% |
| !! | TCAAAACTTTATAAAAAAAA+GGG | + | chr1.2:85872259-85872278 | MS.gene97340:intron | 10.0% |
| !!! | AAAAAAAAAAAAAGTCTTTT+TGG | - | chr1.2:85871614-85871633 | None:intergenic | 10.0% |
| !!! | AAAAATAAATCTTTTTTATG+AGG | - | chr1.2:85871025-85871044 | None:intergenic | 10.0% |
| !! | AATGTATACTCATTTATATA+TGG | + | chr1.2:85874231-85874250 | MS.gene97340:intron | 15.0% |
| !! | ATGTATACTCATTTATATAT+GGG | + | chr1.2:85874232-85874251 | MS.gene97340:intron | 15.0% |
| !! | ATGTCTAATTAAAAAATTGA+GGG | + | chr1.2:85873139-85873158 | MS.gene97340:intron | 15.0% |
| !! | CATCTTACATTATTATATAA+AGG | - | chr1.2:85871899-85871918 | None:intergenic | 15.0% |
| !! | CCTAATAATTAATATATAAC+AGG | + | chr1.2:85870843-85870862 | MS.gene97340:intron | 15.0% |
| !! | CCTGTTATATATTAATTATT+AGG | - | chr1.2:85870846-85870865 | None:intergenic | 15.0% |
| !! | TATCAAAATATAATGTAATG+TGG | - | chr1.2:85871164-85871183 | None:intergenic | 15.0% |
| !! | TATGTCTAATTAAAAAATTG+AGG | + | chr1.2:85873138-85873157 | MS.gene97340:intron | 15.0% |
| !! | TCAAATATAAATATAAGTAG+CGG | - | chr1.2:85871779-85871798 | None:intergenic | 15.0% |
| !! | TTATACATTAACAATCTAAT+AGG | + | chr1.2:85871134-85871153 | MS.gene97340:intron | 15.0% |
| !!! | AAAAGAATATTTCTATTTCT+GGG | - | chr1.2:85872781-85872800 | None:intergenic | 15.0% |
| !!! | AAACATTTTCTTCTTTTTTA+TGG | - | chr1.2:85871315-85871334 | None:intergenic | 15.0% |
| !!! | AACAATAGTTTTTATTGATA+TGG | - | chr1.2:85872157-85872176 | None:intergenic | 15.0% |
| !!! | AATTTTGATGGTTTTTTTTA+GGG | - | chr1.2:85873213-85873232 | None:intergenic | 15.0% |
| !!! | ACAATAGTTTTTATTGATAT+GGG | - | chr1.2:85872156-85872175 | None:intergenic | 15.0% |
| !!! | GATATTTTAATAAACCTTAA+GGG | + | chr1.2:85873171-85873190 | MS.gene97340:intron | 15.0% |
| !!! | TAAAAGAATATTTCTATTTC+TGG | - | chr1.2:85872782-85872801 | None:intergenic | 15.0% |
| !!! | TGATATTTTAATAAACCTTA+AGG | + | chr1.2:85873170-85873189 | MS.gene97340:intron | 15.0% |
| !!! | TGTTTTTTTTTTATTGCTAA+TGG | + | chr1.2:85873673-85873692 | MS.gene97340:intron | 15.0% |
| !!! | TTAAAATGTGTTGATTAAAT+TGG | - | chr1.2:85874532-85874551 | None:intergenic | 15.0% |
| !!! | TTTTATTGATCATTCTTTTT+AGG | - | chr1.2:85870792-85870811 | None:intergenic | 15.0% |
| !! | AAACATACTTAAAGTAAGTT+TGG | + | chr1.2:85871584-85871603 | MS.gene97340:intron | 20.0% |
| !! | AAATCTTACTTTCATAAGTT+TGG | - | chr1.2:85870874-85870893 | None:intergenic | 20.0% |
| !! | AATCTTTAACAAATGTCATA+TGG | + | chr1.2:85870744-85870763 | MS.gene97340:intron | 20.0% |
| !! | ACTCTATTGATATTAATATG+AGG | - | chr1.2:85871953-85871972 | None:intergenic | 20.0% |
| !! | ATAACCATGATTTATCTAAA+AGG | + | chr1.2:85873388-85873407 | MS.gene97340:intron | 20.0% |
| !! | ATAGATATACAATCAAAAAC+TGG | - | chr1.2:85872689-85872708 | None:intergenic | 20.0% |
| !! | ATATTAATTATTAGGCTAGA+GGG | - | chr1.2:85870838-85870857 | None:intergenic | 20.0% |
| !! | ATCTTTAACAAATGTCATAT+GGG | + | chr1.2:85870745-85870764 | MS.gene97340:intron | 20.0% |
| !! | ATTATAGATAATTACAACGA+GGG | + | chr1.2:85870952-85870971 | MS.gene97340:intron | 20.0% |
| !! | CTCTTACCTAAAAAAAAAAA+AGG | - | chr1.2:85871847-85871866 | None:intergenic | 20.0% |
| !! | GAAAATCATGGAAAAATATT+GGG | + | chr1.2:85873550-85873569 | MS.gene97340:intron | 20.0% |
| !! | GATATTTAGATACATGAAAT+AGG | - | chr1.2:85874510-85874529 | None:intergenic | 20.0% |
| !! | TATATTAATTATTAGGCTAG+AGG | - | chr1.2:85870839-85870858 | None:intergenic | 20.0% |
| !! | TGAAAATCATGGAAAAATAT+TGG | + | chr1.2:85873549-85873568 | MS.gene97340:intron | 20.0% |
| !! | TGTCTAATTAAAAAATTGAG+GGG | + | chr1.2:85873140-85873159 | MS.gene97340:intron | 20.0% |
| !! | TTTACCTTAAATTCCTTTAA+CGG | + | chr1.2:85872463-85872482 | MS.gene97340:intron | 20.0% |
| !!! | ACTGTTTTTTTAAAACTAGA+GGG | - | chr1.2:85872333-85872352 | None:intergenic | 20.0% |
| !!! | AGAGAACCTTTTTTTTTTTT+AGG | + | chr1.2:85871838-85871857 | MS.gene97340:intron | 20.0% |
| !!! | ATAAATCTTTTTTATGAGGT+CGG | - | chr1.2:85871021-85871040 | None:intergenic | 20.0% |
| !!! | ATGGATATTTTAAAAAGTCA+CGG | + | chr1.2:85871663-85871682 | MS.gene97340:intron | 20.0% |
| !!! | CAATTTTGATGGTTTTTTTT+AGG | - | chr1.2:85873214-85873233 | None:intergenic | 20.0% |
| !!! | TTTTCCATGATTTTCATTTT+CGG | - | chr1.2:85873545-85873564 | None:intergenic | 20.0% |
| ! | AAAAAAAAGTGGACATAACA+AGG | + | chr1.2:85872938-85872957 | MS.gene97340:intron | 25.0% |
| ! | AATTTCAAGGGAAATATAGT+GGG | + | chr1.2:85872961-85872980 | MS.gene97340:intron | 25.0% |
| ! | ACATCGAATAAATTTCTCAA+AGG | - | chr1.2:85874270-85874289 | None:intergenic | 25.0% |
| ! | ACATGCTAACTATAATTCAT+TGG | - | chr1.2:85874132-85874151 | None:intergenic | 25.0% |
| ! | ATTTATATATGGGTGTGTTT+AGG | + | chr1.2:85874242-85874261 | MS.gene97340:intron | 25.0% |
| ! | GAAATTTATTCGATGTACAA+AGG | + | chr1.2:85874274-85874293 | MS.gene97340:CDS | 25.0% |
| ! | GATTATAGATAATTACAACG+AGG | + | chr1.2:85870951-85870970 | MS.gene97340:intron | 25.0% |
| ! | GTCTAATTAAAAAATTGAGG+GGG | + | chr1.2:85873141-85873160 | MS.gene97340:intron | 25.0% |
| ! | GTTGTTTAATAAAACCTCAA+GGG | - | chr1.2:85872301-85872320 | None:intergenic | 25.0% |
| ! | TATTTACAGTCACATACAAT+AGG | - | chr1.2:85872198-85872217 | None:intergenic | 25.0% |
| ! | TCTTTAACAAATGTCATATG+GGG | + | chr1.2:85870746-85870765 | MS.gene97340:intron | 25.0% |
| ! | TGGAAAAAATTGAACCTTAA+AGG | - | chr1.2:85874420-85874439 | None:intergenic | 25.0% |
| ! | TTAAGTATGTTTGATCTCAT+CGG | - | chr1.2:85871576-85871595 | None:intergenic | 25.0% |
| ! | TTACCTTAAATTCCTTTAAC+GGG | + | chr1.2:85872464-85872483 | MS.gene97340:intron | 25.0% |
| ! | TTCCATAACATTATTGATGT+AGG | + | chr1.2:85873930-85873949 | MS.gene97340:intron | 25.0% |
| ! | TTCCTACATCAATAATGTTA+TGG | - | chr1.2:85873935-85873954 | None:intergenic | 25.0% |
| ! | TTGAAATGAAAGTTACGTAA+TGG | - | chr1.2:85872493-85872512 | None:intergenic | 25.0% |
| ! | TTTATTGCTAATGGTATGTA+GGG | + | chr1.2:85873682-85873701 | MS.gene97340:intron | 25.0% |
| ! | TTTATTGTCGACAAAAACTA+CGG | + | chr1.2:85874090-85874109 | MS.gene97340:intron | 25.0% |
| !! | CAAATGTAGAAAGTTTTTGT+TGG | - | chr1.2:85872860-85872879 | None:intergenic | 25.0% |
| !! | TCAACCTTTTAGATAAATCA+TGG | - | chr1.2:85873395-85873414 | None:intergenic | 25.0% |
| !! | TGAATACACAATTCTAAAGA+TGG | - | chr1.2:85870661-85870680 | None:intergenic | 25.0% |
| !! | TGTTGTTTAATAAAACCTCA+AGG | - | chr1.2:85872302-85872321 | None:intergenic | 25.0% |
| !! | TTTTATTGCTAATGGTATGT+AGG | + | chr1.2:85873681-85873700 | MS.gene97340:intron | 25.0% |
| !!! | ATTTTAATAAACCTTAAGGG+AGG | + | chr1.2:85873174-85873193 | MS.gene97340:intron | 25.0% |
| !!! | CTGTTTTTTTAAAACTAGAG+GGG | - | chr1.2:85872332-85872351 | None:intergenic | 25.0% |
| !!! | GACTGTTTTTTTAAAACTAG+AGG | - | chr1.2:85872334-85872353 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTAAAACTAGAGG+GGG | - | chr1.2:85872331-85872350 | None:intergenic | 25.0% |
| !!! | TTCTTCCTCAATTTTTGAAA+CGG | - | chr1.2:85873025-85873044 | None:intergenic | 25.0% |
| AAACACCAAATGGAACATTA+GGG | + | chr1.2:85874465-85874484 | MS.gene97340:CDS | 30.0% | |
| AAACCCGTTAAAGGAATTTA+AGG | - | chr1.2:85872470-85872489 | None:intergenic | 30.0% | |
| AAACTTACCTATCACTATCA+TGG | + | chr1.2:85871495-85871514 | MS.gene97340:intron | 30.0% | |
| AACCCCTAAATCAAATATTG+AGG | + | chr1.2:85873459-85873478 | MS.gene97340:intron | 30.0% | |
| AACTCATATGGTGTTTAATC+TGG | + | chr1.2:85870916-85870935 | MS.gene97340:intron | 30.0% | |
| ACAACTGCAAATGCAATTTA+AGG | + | chr1.2:85874172-85874191 | MS.gene97340:intron | 30.0% | |
| ACAAGTGATTGAGTAGTATT+AGG | - | chr1.2:85873329-85873348 | None:intergenic | 30.0% | |
| ACCCCTAAATCAAATATTGA+GGG | + | chr1.2:85873460-85873479 | MS.gene97340:intron | 30.0% | |
| AGGTAAAAATGCAAAAGCTA+CGG | - | chr1.2:85872450-85872469 | None:intergenic | 30.0% | |
| ATAAATCATGGTTATCTCGA+GGG | - | chr1.2:85873383-85873402 | None:intergenic | 30.0% | |
| ATGAAATCTGAAGGAACATA+TGG | + | chr1.2:85874356-85874375 | MS.gene97340:CDS | 30.0% | |
| ATGTTCCTTCAGATTTCATA+TGG | - | chr1.2:85874355-85874374 | None:intergenic | 30.0% | |
| CTGAACAATTCATAGTTCTT+TGG | + | chr1.2:85870567-85870586 | MS.gene97340:intron | 30.0% | |
| GAATTTCAAGGGAAATATAG+TGG | + | chr1.2:85872960-85872979 | MS.gene97340:intron | 30.0% | |
| GACATAACAAGGAATTTCAA+GGG | + | chr1.2:85872949-85872968 | MS.gene97340:intron | 30.0% | |
| GTTTCGTGAGGAAATAATTT+GGG | - | chr1.2:85871463-85871482 | None:intergenic | 30.0% | |
| TAATATGAGGAAGATTTGTG+CGG | - | chr1.2:85871940-85871959 | None:intergenic | 30.0% | |
| TCGTGAATGTTTCATGAATA+TGG | + | chr1.2:85872107-85872126 | MS.gene97340:intron | 30.0% | |
| TGTTCCTTCAGATTTCATAT+GGG | - | chr1.2:85874354-85874373 | None:intergenic | 30.0% | |
| TGTTTCGTGAGGAAATAATT+TGG | - | chr1.2:85871464-85871483 | None:intergenic | 30.0% | |
| TTATTGCTAATGGTATGTAG+GGG | + | chr1.2:85873683-85873702 | MS.gene97340:intron | 30.0% | |
| TTTAATCTGGTAAGTATGGT+GGG | + | chr1.2:85870929-85870948 | MS.gene97340:intron | 30.0% | |
| TTTGTGAAGTTCACTGTATT+AGG | + | chr1.2:85873732-85873751 | MS.gene97340:CDS | 30.0% | |
| ! | AGTCCCTCAATATTTGATTT+AGG | - | chr1.2:85873466-85873485 | None:intergenic | 30.0% |
| ! | CTTATAATGTTTTCACTGCT+AGG | + | chr1.2:85870280-85870299 | MS.gene97340:intron | 30.0% |
| ! | GAAGCTGTTAAATTTTGCAT+TGG | - | chr1.2:85872080-85872099 | None:intergenic | 30.0% |
| ! | GTCCCTCAATATTTGATTTA+GGG | - | chr1.2:85873465-85873484 | None:intergenic | 30.0% |
| ! | TCCCTCAATATTTGATTTAG+GGG | - | chr1.2:85873464-85873483 | None:intergenic | 30.0% |
| ! | TCTTTCTTTTCTTTCTTCCA+CGG | - | chr1.2:85872992-85873011 | None:intergenic | 30.0% |
| !!! | GCATGACTTTTTTAGTTGAA+TGG | + | chr1.2:85871644-85871663 | MS.gene97340:intron | 30.0% |
| !!! | TGATTGAAGCATTGCTTTTA+TGG | + | chr1.2:85873620-85873639 | MS.gene97340:intron | 30.0% |
| AAATAGTGTTCCATCACAAC+GGG | + | chr1.2:85870438-85870457 | MS.gene97340:intron | 35.0% | |
| AACACCAAATGGAACATTAG+GGG | + | chr1.2:85874466-85874485 | MS.gene97340:CDS | 35.0% | |
| AAGATTGACGACTTCAACAT+TGG | + | chr1.2:85874736-85874755 | MS.gene97340:CDS | 35.0% | |
| AATTATATTGACCTCCCTTG+AGG | + | chr1.2:85872284-85872303 | MS.gene97340:intron | 35.0% | |
| ACACCATATGAGTTCTTCAA+AGG | - | chr1.2:85870910-85870929 | None:intergenic | 35.0% | |
| ACTAACACCGTTAACTTTGA+AGG | - | chr1.2:85872362-85872381 | None:intergenic | 35.0% | |
| ACTGCCGAAAATGAAAATCA+TGG | + | chr1.2:85873538-85873557 | MS.gene97340:intron | 35.0% | |
| AGAACTTAGAGAAGCCTTTA+AGG | + | chr1.2:85874403-85874422 | MS.gene97340:CDS | 35.0% | |
| AGGAGTTTACTTGGAAGAAA+AGG | + | chr1.2:85873752-85873771 | MS.gene97340:CDS | 35.0% | |
| AGGGATCAATAAGTCATTAG+AGG | - | chr1.2:85873364-85873383 | None:intergenic | 35.0% | |
| AGGTAGTGAATATGTGAGAA+AGG | + | chr1.2:85874310-85874329 | MS.gene97340:CDS | 35.0% | |
| AGTAGCGGTGAAAATAAGTT+CGG | - | chr1.2:85871764-85871783 | None:intergenic | 35.0% | |
| ATAACAGCATACTCATGTTC+AGG | - | chr1.2:85874610-85874629 | None:intergenic | 35.0% | |
| ATCACATTGAGGATTGAGTA+GGG | + | chr1.2:85873109-85873128 | MS.gene97340:intron | 35.0% | |
| ATGAGCGGATCATGATAAAA+AGG | - | chr1.2:85872048-85872067 | None:intergenic | 35.0% | |
| ATTGCCCATATGAAATCTGA+AGG | + | chr1.2:85874347-85874366 | MS.gene97340:CDS | 35.0% | |
| CAAACAATGTAAACCAAGAG+GGG | + | chr1.2:85873078-85873097 | MS.gene97340:intron | 35.0% | |
| CAAACACCAAATGGAACATT+AGG | + | chr1.2:85874464-85874483 | MS.gene97340:CDS | 35.0% | |
| CACTGTATTAGGAGTTTACT+TGG | + | chr1.2:85873743-85873762 | MS.gene97340:CDS | 35.0% | |
| CATGTTATCTTATGCCCTAA+GGG | + | chr1.2:85872741-85872760 | MS.gene97340:intron | 35.0% | |
| CATTGGATTGAATACATGAG+CGG | - | chr1.2:85872063-85872082 | None:intergenic | 35.0% | |
| CTAACACCGTTAACTTTGAA+GGG | - | chr1.2:85872361-85872380 | None:intergenic | 35.0% | |
| CTTGCACATATACTGTTGAA+TGG | + | chr1.2:85874059-85874078 | MS.gene97340:intron | 35.0% | |
| GAAATAGTGTTCCATCACAA+CGG | + | chr1.2:85870437-85870456 | MS.gene97340:intron | 35.0% | |
| GATAAATCATGGTTATCTCG+AGG | - | chr1.2:85873384-85873403 | None:intergenic | 35.0% | |
| GATATCTCGGTAGAAATCAA+GGG | - | chr1.2:85873835-85873854 | None:intergenic | 35.0% | |
| GCAAACAATGTAAACCAAGA+GGG | + | chr1.2:85873077-85873096 | MS.gene97340:intron | 35.0% | |
| GGACATAACAAGGAATTTCA+AGG | + | chr1.2:85872948-85872967 | MS.gene97340:intron | 35.0% | |
| GGTGTTTAATCTGGTAAGTA+TGG | + | chr1.2:85870925-85870944 | MS.gene97340:intron | 35.0% | |
| GTTTAATAAAACCTCAAGGG+AGG | - | chr1.2:85872298-85872317 | None:intergenic | 35.0% | |
| GTTTAATCTGGTAAGTATGG+TGG | + | chr1.2:85870928-85870947 | MS.gene97340:intron | 35.0% | |
| TATCACATTGAGGATTGAGT+AGG | + | chr1.2:85873108-85873127 | MS.gene97340:intron | 35.0% | |
| TATTCTATATCCCGTTGTGA+TGG | - | chr1.2:85870451-85870470 | None:intergenic | 35.0% | |
| TCATGTGCTAAGAAGTTAAG+AGG | - | chr1.2:85872427-85872446 | None:intergenic | 35.0% | |
| TCATGTTATCTTATGCCCTA+AGG | + | chr1.2:85872740-85872759 | MS.gene97340:intron | 35.0% | |
| TGAAGACGTAAGCATGAAAT+AGG | - | chr1.2:85871097-85871116 | None:intergenic | 35.0% | |
| TGAGCGGATCATGATAAAAA+GGG | - | chr1.2:85872047-85872066 | None:intergenic | 35.0% | |
| TGATATCTCGGTAGAAATCA+AGG | - | chr1.2:85873836-85873855 | None:intergenic | 35.0% | |
| TGCAAACAATGTAAACCAAG+AGG | + | chr1.2:85873076-85873095 | MS.gene97340:intron | 35.0% | |
| TTATTTCCTCACGAAACATC+AGG | + | chr1.2:85871466-85871485 | MS.gene97340:intron | 35.0% | |
| TTCGGCCTTACAAAATGTTA+GGG | + | chr1.2:85870411-85870430 | MS.gene97340:intron | 35.0% | |
| TTCTACCGAGATATCATCAA+AGG | + | chr1.2:85873840-85873859 | MS.gene97340:CDS | 35.0% | |
| TTCTTCAGACAAACACCAAA+TGG | + | chr1.2:85874455-85874474 | MS.gene97340:CDS | 35.0% | |
| TTTCGGCCTTACAAAATGTT+AGG | + | chr1.2:85870410-85870429 | MS.gene97340:intron | 35.0% | |
| ! | ACACACAAGTGTATTTGTTG+CGG | + | chr1.2:85872017-85872036 | MS.gene97340:intron | 35.0% |
| ! | CAAAATCCTTAACGGCTTTT+CGG | + | chr1.2:85870393-85870412 | MS.gene97340:intron | 35.0% |
| ! | CTTCAGTATCGAATTTAGTG+AGG | + | chr1.2:85870367-85870386 | MS.gene97340:intron | 35.0% |
| ! | CTTCCTTTGAAGAACTCATA+TGG | + | chr1.2:85870904-85870923 | MS.gene97340:intron | 35.0% |
| ! | TATAAACAACAAGCCGCTTT+CGG | + | chr1.2:85874627-85874646 | MS.gene97340:CDS | 35.0% |
| ! | TGAGGTACCAAAATCCTTAA+CGG | + | chr1.2:85870385-85870404 | MS.gene97340:intron | 35.0% |
| ! | TGCTACCTTTGATGATATCT+CGG | - | chr1.2:85873848-85873867 | None:intergenic | 35.0% |
| ! | TTCAGGTATTGTCTCATCTT+TGG | - | chr1.2:85874593-85874612 | None:intergenic | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | - | chr1.2:85872898-85872917 | None:intergenic | 35.0% |
| !! | ACACATTAACTTGTGCCTTA+AGG | + | chr1.2:85872880-85872899 | MS.gene97340:intron | 35.0% |
| !! | CACATTAACTTGTGCCTTAA+GGG | + | chr1.2:85872881-85872900 | MS.gene97340:intron | 35.0% |
| !! | GCTTACACAAACTTGTTGAA+AGG | - | chr1.2:85872556-85872575 | None:intergenic | 35.0% |
| !! | TGTGGCTCTATCAATTTTGA+TGG | - | chr1.2:85873225-85873244 | None:intergenic | 35.0% |
| !!! | AAGGTTCAATTTTTTCCACC+AGG | + | chr1.2:85874422-85874441 | MS.gene97340:CDS | 35.0% |
| !!! | AGGTTCAATTTTTTCCACCA+GGG | + | chr1.2:85874423-85874442 | MS.gene97340:CDS | 35.0% |
| ACAAAGGTGAGAACACTAGA+AGG | + | chr1.2:85874290-85874309 | MS.gene97340:CDS | 40.0% | |
| AGAGGGGAAATGAATTCGTT+TGG | - | chr1.2:85872608-85872627 | None:intergenic | 40.0% | |
| ATCACTTACTCCTAAGTGGA+AGG | + | chr1.2:85873782-85873801 | MS.gene97340:CDS | 40.0% | |
| CTAACCCCTAATGTTCCATT+TGG | - | chr1.2:85874473-85874492 | None:intergenic | 40.0% | |
| CTTCTGTAGTGACAACACTT+TGG | + | chr1.2:85872654-85872673 | MS.gene97340:intron | 40.0% | |
| GAGCGGATCATGATAAAAAG+GGG | - | chr1.2:85872046-85872065 | None:intergenic | 40.0% | |
| GCAAAACTATGGTACTAGAG+GGG | - | chr1.2:85872624-85872643 | None:intergenic | 40.0% | |
| GCCTTACAAAATGTTAGGGA+GGG | + | chr1.2:85870415-85870434 | MS.gene97340:intron | 40.0% | |
| GGCAAAACTATGGTACTAGA+GGG | - | chr1.2:85872625-85872644 | None:intergenic | 40.0% | |
| GGCTTCTCTAAGTTCTTGAA+TGG | - | chr1.2:85874399-85874418 | None:intergenic | 40.0% | |
| GGTGGAGTTCATTGAATTTC+CGG | + | chr1.2:85870165-85870184 | MS.gene97340:CDS | 40.0% | |
| GTGACAGAATTTATGTGCGT+CGG | - | chr1.2:85870339-85870358 | None:intergenic | 40.0% | |
| GTGAGAGGGTTAGATATTGA+TGG | + | chr1.2:85873705-85873724 | MS.gene97340:CDS | 40.0% | |
| TAGCATCACTTACTCCTAAG+TGG | + | chr1.2:85873778-85873797 | MS.gene97340:CDS | 40.0% | |
| TCACATTGAGGATTGAGTAG+GGG | + | chr1.2:85873110-85873129 | MS.gene97340:intron | 40.0% | |
| TCACCTCCCTTCAAAGTTAA+CGG | + | chr1.2:85872352-85872371 | MS.gene97340:intron | 40.0% | |
| TCACTTACTCCTAAGTGGAA+GGG | + | chr1.2:85873783-85873802 | MS.gene97340:CDS | 40.0% | |
| TGACAGAATTTATGTGCGTC+GGG | - | chr1.2:85870338-85870357 | None:intergenic | 40.0% | |
| TGGCAAAACTATGGTACTAG+AGG | - | chr1.2:85872626-85872645 | None:intergenic | 40.0% | |
| TTGCTTAACATGTGCCCTTA+GGG | - | chr1.2:85872758-85872777 | None:intergenic | 40.0% | |
| ! | AATTGCATTGACCTCCCTTA+AGG | - | chr1.2:85873188-85873207 | None:intergenic | 40.0% |
| ! | ACGTAATGGAAACCCGTTAA+AGG | - | chr1.2:85872479-85872498 | None:intergenic | 40.0% |
| ! | AGAGGGAGTCAGTGAATTTT+AGG | - | chr1.2:85870821-85870840 | None:intergenic | 40.0% |
| ! | CACACAAGTGTATTTGTTGC+GGG | + | chr1.2:85872018-85872037 | MS.gene97340:intron | 40.0% |
| ! | CGAAAAGCCGTTAAGGATTT+TGG | - | chr1.2:85870395-85870414 | None:intergenic | 40.0% |
| ! | TCCCTCCCTAACATTTTGTA+AGG | - | chr1.2:85870419-85870438 | None:intergenic | 40.0% |
| ! | TGCTGCCGTTTCAAAAATTG+AGG | + | chr1.2:85873017-85873036 | MS.gene97340:intron | 40.0% |
| ! | TTCAAGGGAAATATAGTGGG+TGG | + | chr1.2:85872964-85872983 | MS.gene97340:intron | 40.0% |
| !! | AAATAGGACTTGGTGGATGA+TGG | - | chr1.2:85870205-85870224 | None:intergenic | 40.0% |
| !! | CAAAGTGTTGTCACTACAGA+AGG | - | chr1.2:85872656-85872675 | None:intergenic | 40.0% |
| !!! | GGTTCAATTTTTTCCACCAG+GGG | + | chr1.2:85874424-85874443 | MS.gene97340:CDS | 40.0% |
| AACAGGAATTTCTCCGGTCA+TGG | - | chr1.2:85874668-85874687 | None:intergenic | 45.0% | |
| AAGAAATACCTGCACCACCA+AGG | - | chr1.2:85870228-85870247 | None:intergenic | 45.0% | |
| AATGGTATGTAGGGGTGAGA+GGG | + | chr1.2:85873691-85873710 | MS.gene97340:intron | 45.0% | |
| ACAATGTAAACCAAGAGGGG+AGG | + | chr1.2:85873081-85873100 | MS.gene97340:intron | 45.0% | |
| ACCAAGGAAATAGGACTTGG+TGG | - | chr1.2:85870212-85870231 | None:intergenic | 45.0% | |
| ACCAAGTCCTATTTCCTTGG+TGG | + | chr1.2:85870211-85870230 | MS.gene97340:CDS | 45.0% | |
| ACCACCAAGGAAATAGGACT+TGG | - | chr1.2:85870215-85870234 | None:intergenic | 45.0% | |
| AGGCGAAACAGGAATTTCTC+CGG | - | chr1.2:85874674-85874693 | None:intergenic | 45.0% | |
| AGGGATTCAAAGAGCTGAGA+TGG | - | chr1.2:85873816-85873835 | None:intergenic | 45.0% | |
| ATCCATGATCACTGGAGTGA+AGG | + | chr1.2:85870144-85870163 | MS.gene97340:CDS | 45.0% | |
| CCACATAAGTGCATATGCAG+TGG | + | chr1.2:85873240-85873259 | MS.gene97340:intron | 45.0% | |
| CCACTGCATATGCACTTATG+TGG | - | chr1.2:85873243-85873262 | None:intergenic | 45.0% | |
| CCTATCACTATCATGGTGTG+TGG | + | chr1.2:85871502-85871521 | MS.gene97340:intron | 45.0% | |
| GACAGAATTTATGTGCGTCG+GGG | - | chr1.2:85870337-85870356 | None:intergenic | 45.0% | |
| GCCAAACTCTCTTTCAAAGC+AGG | - | chr1.2:85874694-85874713 | None:intergenic | 45.0% | |
| GGCCTTACAAAATGTTAGGG+AGG | + | chr1.2:85870414-85870433 | MS.gene97340:intron | 45.0% | |
| GGTGCATGATGGCAAAACTA+TGG | - | chr1.2:85872635-85872654 | None:intergenic | 45.0% | |
| GTTCATTGAATTTCCGGCAG+TGG | + | chr1.2:85870171-85870190 | MS.gene97340:CDS | 45.0% | |
| GTTGCTTAACATGTGCCCTT+AGG | - | chr1.2:85872759-85872778 | None:intergenic | 45.0% | |
| TAATGGTATGTAGGGGTGAG+AGG | + | chr1.2:85873690-85873709 | MS.gene97340:intron | 45.0% | |
| TCCACCAAGTCCTATTTCCT+TGG | + | chr1.2:85870208-85870227 | MS.gene97340:CDS | 45.0% | |
| TCTTTCAAAGCAGGCGAAAC+AGG | - | chr1.2:85874685-85874704 | None:intergenic | 45.0% | |
| ! | ACACCGTTAACTTTGAAGGG+AGG | - | chr1.2:85872358-85872377 | None:intergenic | 45.0% |
| ! | CCACACACCATGATAGTGAT+AGG | - | chr1.2:85871505-85871524 | None:intergenic | 45.0% |
| ! | TCACTACAGAAGGTGCATGA+TGG | - | chr1.2:85872646-85872665 | None:intergenic | 45.0% |
| !! | AAATATAGTGGGTGGAACCG+TGG | + | chr1.2:85872972-85872991 | MS.gene97340:intron | 45.0% |
| !! | GCCTGCTTTGAAAGAGAGTT+TGG | + | chr1.2:85874690-85874709 | MS.gene97340:CDS | 45.0% |
| !! | GGGAGGTGTTTATCACATTG+AGG | + | chr1.2:85873098-85873117 | MS.gene97340:intron | 45.0% |
| !!! | TTGTGCGGTGCTACAGTTTT+GGG | - | chr1.2:85871925-85871944 | None:intergenic | 45.0% |
| !!! | TTTGTGCGGTGCTACAGTTT+TGG | - | chr1.2:85871926-85871945 | None:intergenic | 45.0% |
| !! | AAAAAATAAAACAAATTATT+AGG | - | chr1.2:85873898-85873917 | None:intergenic | 5.0% |
| !! | ATAATAATAATAAAAAAAAG+TGG | + | chr1.2:85872927-85872946 | MS.gene97340:intron | 5.0% |
| !! | TAAAAATATATAATTGAAAT+AGG | - | chr1.2:85871226-85871245 | None:intergenic | 5.0% |
| !!! | AGATTTTTTTTTTTTTTTTT+AGG | - | chr1.2:85873288-85873307 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTAAAAAAAAACA+TGG | + | chr1.2:85871699-85871718 | MS.gene97340:intron | 5.0% |
| ACCTGCACCACCAAGGAAAT+AGG | - | chr1.2:85870221-85870240 | None:intergenic | 50.0% | |
| CACCTTCACTCCAGTGATCA+TGG | - | chr1.2:85870149-85870168 | None:intergenic | 50.0% | |
| CATGATCACTGGAGTGAAGG+TGG | + | chr1.2:85870147-85870166 | MS.gene97340:CDS | 50.0% | |
| CATTGAGGATTGAGTAGGGG+AGG | + | chr1.2:85873113-85873132 | MS.gene97340:intron | 50.0% | |
| GTAAGGCCGAAAAGCCGTTA+AGG | - | chr1.2:85870402-85870421 | None:intergenic | 50.0% | |
| GTGATAAACACCTCCCCTCT+TGG | - | chr1.2:85873094-85873113 | None:intergenic | 50.0% | |
| TACTCTCGTGAGAGAGGTTG+TGG | - | chr1.2:85871990-85872009 | None:intergenic | 50.0% | |
| TCGAGTCCTGATGTTTCGTG+AGG | - | chr1.2:85871475-85871494 | None:intergenic | 50.0% | |
| TCGTGATACTCTCGTGAGAG+AGG | - | chr1.2:85871996-85872015 | None:intergenic | 50.0% | |
| ! | AAACAACAAGCCGCTTTCGG+AGG | + | chr1.2:85874630-85874649 | MS.gene97340:CDS | 50.0% |
| !! | TAGGACTTGGTGGATGATGG+AGG | - | chr1.2:85870202-85870221 | None:intergenic | 50.0% |
| !! | TCCTATTTCCTTGGTGGTGC+AGG | + | chr1.2:85870217-85870236 | MS.gene97340:CDS | 50.0% |
| !!! | CAATTTTTTCCACCAGGGGC+TGG | + | chr1.2:85874428-85874447 | MS.gene97340:CDS | 50.0% |
| AAGAAAACACCAGCCCCTGG+TGG | - | chr1.2:85874440-85874459 | None:intergenic | 55.0% | |
| CTGAAGAAAACACCAGCCCC+TGG | - | chr1.2:85874443-85874462 | None:intergenic | 55.0% | |
| GCAGCAGCATCCATGATCAC+TGG | + | chr1.2:85870136-85870155 | MS.gene97340:CDS | 55.0% | |
| GGAGTCTTGCCCTTCCACTT+AGG | - | chr1.2:85873795-85873814 | None:intergenic | 55.0% | |
| TCCAACACTGCCTCCGAAAG+CGG | - | chr1.2:85874643-85874662 | None:intergenic | 55.0% | |
| ! | GCAGTGTTGGAGACCATGAC+CGG | + | chr1.2:85874652-85874671 | MS.gene97340:CDS | 55.0% |
| !! | GATGGAGGTGTCACCACTGC+CGG | - | chr1.2:85870187-85870206 | None:intergenic | 60.0% |
| ! | GCCGCTTTCGGAGGCAGTGT+TGG | + | chr1.2:85874639-85874658 | MS.gene97340:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 85870127 | 85874765 | 85870127 | ID=MS.gene97340 |
| chr1.2 | mRNA | 85870127 | 85874765 | 85870127 | ID=MS.gene97340.t1;Parent=MS.gene97340 |
| chr1.2 | exon | 85870127 | 85870238 | 85870127 | ID=MS.gene97340.t1.exon1;Parent=MS.gene97340.t1 |
| chr1.2 | CDS | 85870127 | 85870238 | 85870127 | ID=cds.MS.gene97340.t1;Parent=MS.gene97340.t1 |
| chr1.2 | exon | 85873703 | 85873861 | 85873703 | ID=MS.gene97340.t1.exon2;Parent=MS.gene97340.t1 |
| chr1.2 | CDS | 85873703 | 85873861 | 85873703 | ID=cds.MS.gene97340.t1;Parent=MS.gene97340.t1 |
| chr1.2 | exon | 85874264 | 85874487 | 85874264 | ID=MS.gene97340.t1.exon3;Parent=MS.gene97340.t1 |
| chr1.2 | CDS | 85874264 | 85874487 | 85874264 | ID=cds.MS.gene97340.t1;Parent=MS.gene97340.t1 |
| chr1.2 | exon | 85874580 | 85874765 | 85874580 | ID=MS.gene97340.t1.exon4;Parent=MS.gene97340.t1 |
| chr1.2 | CDS | 85874580 | 85874765 | 85874580 | ID=cds.MS.gene97340.t1;Parent=MS.gene97340.t1 |
| Gene Sequence |
| Protein sequence |
