Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97601.t1 | XP_003621331.1 | 95.1 | 367 | 18 | 0 | 1 | 367 | 1 | 367 | 5.00E-203 | 716.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97601.t1 | P93324 | 61.6 | 367 | 132 | 3 | 8 | 367 | 8 | 372 | 1.4e-129 | 464.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97601.t1 | G7L359 | 95.1 | 367 | 18 | 0 | 1 | 367 | 1 | 367 | 3.6e-203 | 716.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049611 | MS.gene97601 | 0.820634 | 6.18E-53 | -1.69E-46 |
| MS.gene049634 | MS.gene97601 | 0.801234 | 9.91E-49 | -1.69E-46 |
| MS.gene049710 | MS.gene97601 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene050082 | MS.gene97601 | 0.81261 | 3.89E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene97601 | 0.818313 | 2.09E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene97601 | 0.809763 | 1.61E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene97601 | 0.800794 | 1.22E-48 | -1.69E-46 |
| MS.gene051044 | MS.gene97601 | 0.833622 | 4.80E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene97601 | 0.807996 | 3.85E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene97601 | 0.800805 | 1.21E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene97601 | 0.84048 | 8.48E-58 | -1.69E-46 |
| MS.gene051364 | MS.gene97601 | 0.802819 | 4.68E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene97601 | 0.809147 | 2.18E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene97601 | 0.828525 | 8.56E-55 | -1.69E-46 |
| MS.gene051632 | MS.gene97601 | 0.81276 | 3.60E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene97601 | 0.810331 | 1.22E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene97601 | 0.832456 | 9.36E-56 | -1.69E-46 |
| MS.gene053488 | MS.gene97601 | 0.853772 | 1.92E-61 | -1.69E-46 |
| MS.gene053887 | MS.gene97601 | 0.827385 | 1.61E-54 | -1.69E-46 |
| MS.gene054056 | MS.gene97601 | 0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene055124 | MS.gene97601 | 0.813931 | 1.99E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene97601 | 0.830098 | 3.56E-55 | -1.69E-46 |
| MS.gene055942 | MS.gene97601 | 0.856655 | 2.78E-62 | -1.69E-46 |
| MS.gene055959 | MS.gene97601 | 0.810179 | 1.31E-50 | -1.69E-46 |
| MS.gene056224 | MS.gene97601 | 0.832014 | 1.20E-55 | -1.69E-46 |
| MS.gene056856 | MS.gene97601 | 0.852284 | 5.11E-61 | -1.69E-46 |
| MS.gene057544 | MS.gene97601 | 0.807856 | 4.12E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene97601 | 0.847816 | 9.10E-60 | -1.69E-46 |
| MS.gene057549 | MS.gene97601 | 0.989113 | 9.51E-177 | -1.69E-46 |
| MS.gene058067 | MS.gene97601 | 0.809285 | 2.04E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene97601 | 0.828778 | 7.44E-55 | -1.69E-46 |
| MS.gene058093 | MS.gene97601 | 0.868212 | 7.72E-66 | -1.69E-46 |
| MS.gene058099 | MS.gene97601 | 0.882516 | 9.75E-71 | -1.69E-46 |
| MS.gene058109 | MS.gene97601 | 0.800003 | 1.77E-48 | -1.69E-46 |
| MS.gene058171 | MS.gene97601 | 0.804918 | 1.72E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene97601 | 0.811118 | 8.21E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene97601 | 0.84056 | 8.08E-58 | -1.69E-46 |
| MS.gene058269 | MS.gene97601 | 0.837385 | 5.36E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene97601 | 0.801574 | 8.44E-49 | -1.69E-46 |
| MS.gene058382 | MS.gene97601 | 0.813364 | 2.66E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene97601 | 0.816784 | 4.63E-52 | -1.69E-46 |
| MS.gene059703 | MS.gene97601 | 0.803707 | 3.07E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97601.t1 | MTR_7g011990 | 95.095 | 367 | 18 | 0 | 1 | 367 | 1 | 367 | 0.0 | 729 |
| MS.gene97601.t1 | MTR_7g011900 | 79.032 | 372 | 71 | 3 | 1 | 367 | 1 | 370 | 0.0 | 613 |
| MS.gene97601.t1 | MTR_7g012020 | 73.171 | 369 | 94 | 2 | 3 | 367 | 2 | 369 | 0.0 | 575 |
| MS.gene97601.t1 | MTR_7g012040 | 74.255 | 369 | 89 | 2 | 3 | 367 | 2 | 368 | 0.0 | 570 |
| MS.gene97601.t1 | MTR_7g012090 | 68.617 | 376 | 108 | 3 | 1 | 367 | 1 | 375 | 0.0 | 531 |
| MS.gene97601.t1 | MTR_7g012070 | 67.819 | 376 | 111 | 3 | 1 | 367 | 1 | 375 | 0.0 | 529 |
| MS.gene97601.t1 | MTR_2g055940 | 66.129 | 372 | 112 | 4 | 1 | 367 | 1 | 363 | 0.0 | 511 |
| MS.gene97601.t1 | MTR_1g096310 | 61.580 | 367 | 132 | 3 | 8 | 367 | 8 | 372 | 2.11e-168 | 474 |
| MS.gene97601.t1 | MTR_7g012020 | 74.182 | 275 | 66 | 2 | 3 | 273 | 2 | 275 | 1.31e-151 | 429 |
| MS.gene97601.t1 | MTR_7g012020 | 74.603 | 252 | 59 | 2 | 3 | 250 | 2 | 252 | 2.11e-138 | 394 |
| MS.gene97601.t1 | MTR_1g036460 | 49.462 | 372 | 175 | 6 | 5 | 367 | 3 | 370 | 1.38e-128 | 374 |
| MS.gene97601.t1 | MTR_1g036490 | 48.118 | 372 | 180 | 6 | 5 | 367 | 3 | 370 | 4.89e-127 | 370 |
| MS.gene97601.t1 | MTR_3g021430 | 54.261 | 352 | 153 | 5 | 21 | 367 | 9 | 357 | 1.09e-124 | 363 |
| MS.gene97601.t1 | MTR_3g021440 | 53.409 | 352 | 156 | 5 | 21 | 367 | 22 | 370 | 4.83e-123 | 359 |
| MS.gene97601.t1 | MTR_1g036510 | 50.141 | 355 | 165 | 5 | 22 | 367 | 33 | 384 | 2.08e-119 | 350 |
| MS.gene97601.t1 | MTR_3g092900 | 47.107 | 363 | 181 | 7 | 10 | 367 | 7 | 363 | 1.86e-109 | 325 |
| MS.gene97601.t1 | MTR_5g098170 | 41.620 | 358 | 194 | 8 | 19 | 367 | 12 | 363 | 1.60e-93 | 284 |
| MS.gene97601.t1 | MTR_7g118300 | 41.033 | 368 | 207 | 7 | 5 | 367 | 13 | 375 | 2.88e-91 | 278 |
| MS.gene97601.t1 | MTR_0591s0010 | 40.157 | 381 | 210 | 10 | 1 | 367 | 1 | 377 | 1.49e-90 | 277 |
| MS.gene97601.t1 | MTR_7g118320 | 40.496 | 363 | 204 | 7 | 13 | 367 | 4 | 362 | 4.59e-87 | 267 |
| MS.gene97601.t1 | MTR_8g068690 | 39.227 | 362 | 208 | 8 | 14 | 367 | 19 | 376 | 8.81e-85 | 262 |
| MS.gene97601.t1 | MTR_8g068750 | 39.496 | 357 | 204 | 8 | 19 | 367 | 25 | 377 | 2.59e-84 | 261 |
| MS.gene97601.t1 | MTR_1g050220 | 43.333 | 330 | 128 | 6 | 26 | 347 | 6 | 284 | 5.42e-83 | 254 |
| MS.gene97601.t1 | MTR_8g068870 | 39.118 | 340 | 196 | 6 | 35 | 367 | 28 | 363 | 7.17e-80 | 249 |
| MS.gene97601.t1 | MTR_1g036510 | 50.781 | 256 | 115 | 4 | 22 | 269 | 33 | 285 | 6.99e-79 | 244 |
| MS.gene97601.t1 | MTR_8g068570 | 40.432 | 324 | 155 | 10 | 19 | 334 | 25 | 318 | 3.71e-72 | 228 |
| MS.gene97601.t1 | MTR_6g078850 | 39.718 | 355 | 201 | 8 | 21 | 366 | 32 | 382 | 1.47e-71 | 231 |
| MS.gene97601.t1 | MTR_6g060290 | 61.622 | 185 | 52 | 4 | 1 | 181 | 1 | 170 | 7.07e-70 | 216 |
| MS.gene97601.t1 | MTR_8g024160 | 43.446 | 267 | 140 | 5 | 105 | 367 | 69 | 328 | 7.57e-70 | 222 |
| MS.gene97601.t1 | MTR_1g036510 | 48.936 | 235 | 109 | 4 | 22 | 248 | 33 | 264 | 6.92e-67 | 212 |
| MS.gene97601.t1 | MTR_2g072790 | 36.994 | 346 | 199 | 9 | 12 | 348 | 1 | 336 | 2.33e-65 | 211 |
| MS.gene97601.t1 | MTR_8g068730 | 34.540 | 359 | 187 | 11 | 19 | 367 | 25 | 345 | 3.52e-60 | 197 |
| MS.gene97601.t1 | MTR_3g096050 | 36.441 | 354 | 201 | 10 | 26 | 367 | 17 | 358 | 4.60e-59 | 195 |
| MS.gene97601.t1 | MTR_8g068690 | 37.736 | 265 | 155 | 6 | 14 | 271 | 19 | 280 | 1.34e-54 | 181 |
| MS.gene97601.t1 | MTR_3g096070 | 35.207 | 338 | 175 | 11 | 26 | 352 | 17 | 321 | 8.64e-53 | 178 |
| MS.gene97601.t1 | MTR_3g083620 | 34.161 | 322 | 192 | 11 | 39 | 352 | 38 | 347 | 3.23e-49 | 169 |
| MS.gene97601.t1 | MTR_0017s0100 | 33.333 | 321 | 197 | 10 | 41 | 353 | 44 | 355 | 1.22e-47 | 166 |
| MS.gene97601.t1 | MTR_8g068600 | 35.938 | 256 | 147 | 6 | 46 | 287 | 27 | 279 | 2.78e-46 | 159 |
| MS.gene97601.t1 | MTR_0079s0070 | 32.515 | 326 | 193 | 12 | 41 | 353 | 10 | 321 | 4.09e-45 | 158 |
| MS.gene97601.t1 | MTR_4g038440 | 32.615 | 325 | 194 | 12 | 41 | 353 | 44 | 355 | 1.03e-44 | 158 |
| MS.gene97601.t1 | MTR_1g076940 | 29.688 | 320 | 212 | 6 | 41 | 352 | 33 | 347 | 6.44e-44 | 155 |
| MS.gene97601.t1 | MTR_5g074600 | 28.939 | 311 | 205 | 8 | 65 | 366 | 55 | 358 | 2.69e-42 | 151 |
| MS.gene97601.t1 | MTR_3g096050 | 38.247 | 251 | 140 | 7 | 26 | 269 | 17 | 259 | 2.82e-42 | 148 |
| MS.gene97601.t1 | MTR_4g033015 | 31.195 | 343 | 208 | 10 | 40 | 366 | 32 | 362 | 1.19e-40 | 147 |
| MS.gene97601.t1 | MTR_8g068740 | 32.353 | 272 | 142 | 8 | 19 | 283 | 25 | 261 | 9.31e-40 | 142 |
| MS.gene97601.t1 | MTR_4g033200 | 30.904 | 343 | 209 | 10 | 40 | 366 | 32 | 362 | 1.23e-39 | 144 |
| MS.gene97601.t1 | MTR_7g014570 | 27.711 | 332 | 221 | 7 | 41 | 366 | 33 | 351 | 1.09e-38 | 141 |
| MS.gene97601.t1 | MTR_5g074680 | 27.859 | 341 | 230 | 9 | 34 | 366 | 27 | 359 | 1.58e-38 | 141 |
| MS.gene97601.t1 | MTR_4g088345 | 27.679 | 336 | 226 | 9 | 38 | 366 | 30 | 355 | 2.32e-38 | 140 |
| MS.gene97601.t1 | MTR_4g088200 | 29.268 | 328 | 219 | 7 | 34 | 353 | 26 | 348 | 6.94e-38 | 139 |
| MS.gene97601.t1 | MTR_5g074580 | 28.912 | 294 | 198 | 6 | 78 | 366 | 72 | 359 | 2.26e-37 | 138 |
| MS.gene97601.t1 | MTR_4g088340 | 26.409 | 337 | 229 | 7 | 38 | 366 | 7 | 332 | 2.61e-37 | 137 |
| MS.gene97601.t1 | MTR_4g033150 | 29.738 | 343 | 213 | 10 | 40 | 366 | 32 | 362 | 3.63e-37 | 137 |
| MS.gene97601.t1 | MTR_7g024520 | 28.571 | 287 | 181 | 8 | 81 | 361 | 73 | 341 | 1.42e-36 | 135 |
| MS.gene97601.t1 | MTR_4g079160 | 35.714 | 196 | 122 | 2 | 162 | 353 | 147 | 342 | 5.64e-36 | 134 |
| MS.gene97601.t1 | MTR_7g024500 | 28.571 | 273 | 175 | 7 | 81 | 347 | 73 | 331 | 7.11e-36 | 134 |
| MS.gene97601.t1 | MTR_7g014510 | 29.915 | 234 | 157 | 4 | 137 | 366 | 126 | 356 | 3.31e-35 | 132 |
| MS.gene97601.t1 | MTR_8g068620 | 50.909 | 110 | 54 | 0 | 161 | 270 | 2 | 111 | 1.31e-34 | 124 |
| MS.gene97601.t1 | MTR_5g074540 | 31.064 | 235 | 156 | 3 | 137 | 366 | 107 | 340 | 1.55e-33 | 127 |
| MS.gene97601.t1 | MTR_4g088190 | 28.940 | 349 | 221 | 9 | 34 | 366 | 26 | 363 | 1.75e-32 | 125 |
| MS.gene97601.t1 | MTR_5g074610 | 33.333 | 168 | 108 | 2 | 202 | 366 | 159 | 325 | 4.88e-29 | 115 |
| MS.gene97601.t1 | MTR_1g076930 | 29.876 | 241 | 150 | 8 | 38 | 269 | 7 | 237 | 6.06e-28 | 110 |
| MS.gene97601.t1 | MTR_4g033170 | 27.381 | 336 | 224 | 9 | 40 | 366 | 32 | 356 | 1.19e-26 | 109 |
| MS.gene97601.t1 | MTR_4g033085 | 26.786 | 336 | 226 | 9 | 40 | 366 | 32 | 356 | 2.53e-24 | 102 |
| MS.gene97601.t1 | MTR_4g038440 | 29.832 | 238 | 147 | 8 | 41 | 269 | 44 | 270 | 8.54e-23 | 96.7 |
| MS.gene97601.t1 | MTR_8g068760 | 44.000 | 100 | 54 | 2 | 269 | 367 | 135 | 233 | 2.19e-20 | 89.4 |
| MS.gene97601.t1 | MTR_6g060280 | 57.534 | 73 | 25 | 2 | 221 | 288 | 1 | 72 | 1.21e-18 | 79.7 |
| MS.gene97601.t1 | MTR_0794s0020 | 27.753 | 227 | 142 | 7 | 40 | 254 | 32 | 248 | 3.82e-18 | 83.2 |
| MS.gene97601.t1 | MTR_8g068580 | 45.652 | 92 | 48 | 2 | 277 | 367 | 43 | 133 | 2.04e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97601.t1 | AT5G54160 | 48.538 | 342 | 170 | 4 | 21 | 359 | 16 | 354 | 6.45e-112 | 331 |
| MS.gene97601.t1 | AT1G51990 | 37.396 | 361 | 216 | 5 | 13 | 366 | 4 | 361 | 2.71e-83 | 258 |
| MS.gene97601.t1 | AT1G77520 | 38.873 | 355 | 202 | 8 | 25 | 367 | 30 | 381 | 1.62e-82 | 256 |
| MS.gene97601.t1 | AT1G51990 | 37.119 | 361 | 217 | 5 | 13 | 366 | 4 | 361 | 3.43e-82 | 255 |
| MS.gene97601.t1 | AT1G33030 | 38.810 | 353 | 205 | 9 | 21 | 367 | 3 | 350 | 5.67e-78 | 244 |
| MS.gene97601.t1 | AT1G21100 | 41.144 | 367 | 189 | 11 | 5 | 357 | 11 | 364 | 1.53e-73 | 233 |
| MS.gene97601.t1 | AT1G63140 | 39.058 | 361 | 201 | 10 | 21 | 367 | 26 | 381 | 1.83e-73 | 233 |
| MS.gene97601.t1 | AT1G63140 | 39.058 | 361 | 201 | 10 | 21 | 367 | 46 | 401 | 2.88e-73 | 233 |
| MS.gene97601.t1 | AT1G21130 | 40.947 | 359 | 189 | 11 | 15 | 357 | 13 | 364 | 8.71e-73 | 231 |
| MS.gene97601.t1 | AT1G21110 | 40.872 | 367 | 190 | 11 | 5 | 357 | 11 | 364 | 3.29e-71 | 227 |
| MS.gene97601.t1 | AT1G77530 | 38.310 | 355 | 204 | 9 | 25 | 367 | 30 | 381 | 1.54e-70 | 226 |
| MS.gene97601.t1 | AT5G53810 | 38.889 | 342 | 195 | 7 | 38 | 367 | 39 | 378 | 1.96e-70 | 225 |
| MS.gene97601.t1 | AT1G21120 | 40.327 | 367 | 192 | 11 | 5 | 357 | 11 | 364 | 3.46e-70 | 224 |
| MS.gene97601.t1 | AT1G21120 | 40.327 | 367 | 192 | 11 | 5 | 357 | 59 | 412 | 2.06e-69 | 224 |
| MS.gene97601.t1 | AT1G76790 | 37.772 | 368 | 203 | 9 | 18 | 367 | 6 | 365 | 2.00e-67 | 217 |
| MS.gene97601.t1 | AT3G53140 | 34.857 | 350 | 203 | 9 | 13 | 347 | 1 | 340 | 2.09e-61 | 201 |
| MS.gene97601.t1 | AT1G62900 | 45.320 | 203 | 108 | 3 | 167 | 367 | 4 | 205 | 7.28e-57 | 184 |
| MS.gene97601.t1 | AT5G37170 | 35.404 | 322 | 161 | 11 | 57 | 367 | 49 | 334 | 5.13e-53 | 179 |
| MS.gene97601.t1 | AT5G37170 | 43.000 | 200 | 106 | 5 | 173 | 367 | 38 | 234 | 1.69e-50 | 169 |
| MS.gene97601.t1 | AT1G33030 | 37.354 | 257 | 152 | 7 | 21 | 272 | 3 | 255 | 5.96e-49 | 166 |
| MS.gene97601.t1 | AT1G33030 | 37.402 | 254 | 150 | 7 | 21 | 269 | 3 | 252 | 8.50e-48 | 163 |
| MS.gene97601.t1 | AT5G37170 | 42.857 | 189 | 100 | 5 | 184 | 367 | 1 | 186 | 2.03e-47 | 159 |
| MS.gene97601.t1 | AT1G21130 | 40.000 | 275 | 144 | 8 | 5 | 269 | 11 | 274 | 8.19e-44 | 154 |
| MS.gene97601.t1 | AT1G63140 | 37.931 | 261 | 146 | 7 | 21 | 269 | 46 | 302 | 2.03e-42 | 150 |
| MS.gene97601.t1 | AT4G35150 | 34.951 | 206 | 124 | 5 | 157 | 352 | 105 | 310 | 3.50e-38 | 139 |
| MS.gene97601.t1 | AT4G35160 | 31.420 | 331 | 203 | 10 | 39 | 352 | 44 | 367 | 4.99e-37 | 137 |
| MS.gene97601.t1 | AT1G77530 | 36.752 | 234 | 136 | 6 | 25 | 248 | 30 | 261 | 9.48e-34 | 126 |
| MS.gene97601.t1 | AT1G63140 | 36.596 | 235 | 133 | 7 | 21 | 243 | 46 | 276 | 2.87e-32 | 122 |
Find 69 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATATCCATCAATTA+AGG | 0.143550 | 7.4:+87382894 | MS.gene97601:CDS |
| TGCTAAAGAATATGAAATTT+TGG | 0.154985 | 7.4:+87384342 | MS.gene97601:CDS |
| TCATTGATTTGTTGAATATT+TGG | 0.166485 | 7.4:-87382756 | None:intergenic |
| TGTTGTGCTTTCTCCATTAT+TGG | 0.201075 | 7.4:+87384400 | MS.gene97601:CDS |
| GACCTATTCAAGAAAGTTAA+TGG | 0.210657 | 7.4:+87382691 | MS.gene97601:CDS |
| TACAAAGCTTTGCCTCAAAA+TGG | 0.249404 | 7.4:+87384202 | MS.gene97601:CDS |
| CTGGATGCATTTGTTGGTTC+TGG | 0.263376 | 7.4:-87384262 | None:intergenic |
| CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7.4:+87380046 | MS.gene97601:CDS |
| GTATCAACTTTGGTTGATAT+TGG | 0.295454 | 7.4:+87382838 | MS.gene97601:CDS |
| ATGTGTCACCCTGCTTTGAT+AGG | 0.308455 | 7.4:+87380307 | MS.gene97601:CDS |
| TTTGTTGGTTCTGGACATTC+TGG | 0.311438 | 7.4:-87384253 | None:intergenic |
| CATATCCTTTGTATATTTCA+AGG | 0.318611 | 7.4:-87382810 | None:intergenic |
| ATCAATAATTGAAGCAAATC+TGG | 0.319009 | 7.4:-87384281 | None:intergenic |
| AAATTGATTCCCTTAATTGA+TGG | 0.325335 | 7.4:-87382904 | None:intergenic |
| GATACCAACCTTAAGCATTA+TGG | 0.333400 | 7.4:-87384009 | None:intergenic |
| TTCCATTAACTTTCTTGAAT+AGG | 0.343440 | 7.4:-87382693 | None:intergenic |
| AATTTCCATCACTCCAATAA+TGG | 0.352953 | 7.4:-87384413 | None:intergenic |
| GCTCACTTTGTCATTGGAAT+AGG | 0.353123 | 7.4:-87379915 | None:intergenic |
| AACTGCTGGAAACACCAAAT+TGG | 0.362727 | 7.4:-87380005 | None:intergenic |
| TATGGTACTAGGTGCCAATT+TGG | 0.364997 | 7.4:+87379991 | MS.gene97601:CDS |
| TCTAGGCTGTATGTCATAAT+TGG | 0.366231 | 7.4:+87384143 | MS.gene97601:intron |
| TAACTAAGTATGAGTACTTT+GGG | 0.380596 | 7.4:+87382716 | MS.gene97601:CDS |
| GCAAAATATCCATCAATTAA+GGG | 0.391669 | 7.4:+87382895 | MS.gene97601:CDS |
| AACATGGCTCACTTTGTCAT+TGG | 0.401446 | 7.4:-87379921 | None:intergenic |
| TATTTATAGGTTGAATTTCA+AGG | 0.403327 | 7.4:+87382645 | MS.gene97601:intron |
| GTTGATATTGGAGGTGGAAA+TGG | 0.403826 | 7.4:+87382850 | MS.gene97601:CDS |
| TTCTTGAATAGGTCAATCTC+TGG | 0.434820 | 7.4:-87382682 | None:intergenic |
| AACACTCTGATTTGCCGAAT+CGG | 0.435933 | 7.4:+87380116 | MS.gene97601:CDS |
| TGAAATATACAAAGGATATG+AGG | 0.436772 | 7.4:+87382813 | MS.gene97601:CDS |
| AACATACGGTCTAGCCGATT+CGG | 0.437273 | 7.4:-87380130 | None:intergenic |
| CTCTTCTGTCTATTTCTACT+CGG | 0.445033 | 7.4:+87380173 | MS.gene97601:CDS |
| GTCTCGTTGTCATCTATTTG+TGG | 0.446532 | 7.4:-87379959 | None:intergenic |
| TAACTTTGAAGCAATTTCAA+TGG | 0.448818 | 7.4:-87380086 | None:intergenic |
| TTGAATATTTGGTTTACTTG+TGG | 0.449932 | 7.4:-87382745 | None:intergenic |
| ATAACTAAGTATGAGTACTT+TGG | 0.451042 | 7.4:+87382715 | MS.gene97601:CDS |
| AGGAGATACCATAATGCTTA+AGG | 0.457697 | 7.4:+87384001 | MS.gene97601:CDS |
| AACAATGCTACCATCATTGT+TGG | 0.462832 | 7.4:-87380197 | None:intergenic |
| ATTGCAGCATTAAGAACTGC+TGG | 0.480012 | 7.4:-87380019 | None:intergenic |
| GAAAATGCATCACCCATTCC+AGG | 0.488403 | 7.4:+87382946 | MS.gene97601:CDS |
| ACTTTGGTTGATATTGGAGG+TGG | 0.490275 | 7.4:+87382844 | MS.gene97601:CDS |
| ACACTCTCAGCTATGGTACT+AGG | 0.491891 | 7.4:+87379980 | MS.gene97601:CDS |
| TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7.4:+87380052 | MS.gene97601:CDS |
| TGTGTCACCCTGCTTTGATA+GGG | 0.518341 | 7.4:+87380308 | MS.gene97601:CDS |
| TCAACTTTGGTTGATATTGG+AGG | 0.519640 | 7.4:+87382841 | MS.gene97601:CDS |
| TACCACAACCCTATCAAAGC+AGG | 0.522755 | 7.4:-87380316 | None:intergenic |
| GCAAATCTGGATGCATTTGT+TGG | 0.524259 | 7.4:-87384268 | None:intergenic |
| ACCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7.4:+87380314 | MS.gene97601:CDS |
| CATTTAGGGATTGAGCATGT+TGG | 0.530865 | 7.4:+87383951 | MS.gene97601:intron |
| TTTCTCCATTATTGGAGTGA+TGG | 0.540479 | 7.4:+87384408 | MS.gene97601:CDS |
| ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7.4:+87384307 | MS.gene97601:CDS |
| AATAGTGATCATGGTTATGT+TGG | 0.549478 | 7.4:+87380268 | MS.gene97601:CDS |
| TATGATGAAAATAGTGATCA+TGG | 0.549928 | 7.4:+87380259 | MS.gene97601:CDS |
| GGCAAATCAGAGTGTTGAGT+TGG | 0.551660 | 7.4:-87380109 | None:intergenic |
| AAATGGAAAGGTGATTCTTG+TGG | 0.554848 | 7.4:+87384219 | MS.gene97601:CDS |
| AATATCATGTTCATTAATGC+TGG | 0.556116 | 7.4:+87384304 | MS.gene97601:CDS |
| AGCATTATGGTATCTCCTTG+TGG | 0.556439 | 7.4:-87383996 | None:intergenic |
| GAAATATACAAAGGATATGA+GGG | 0.561483 | 7.4:+87382814 | MS.gene97601:CDS |
| GGCTGTATGTCATAATTGGT+CGG | 0.563483 | 7.4:+87384147 | MS.gene97601:intron |
| ATATGAGGGAGTATCAACTT+TGG | 0.569528 | 7.4:+87382828 | MS.gene97601:CDS |
| TTAGGGATTGAGCATGTTGG+AGG | 0.570708 | 7.4:+87383954 | MS.gene97601:intron |
| TAGCAAAAGTATTTACCAGA+AGG | 0.577256 | 7.4:-87380238 | None:intergenic |
| TCTACTCGGACCAACAATGA+TGG | 0.581563 | 7.4:+87380187 | MS.gene97601:CDS |
| CAACGAGACACTCTCAGCTA+TGG | 0.587152 | 7.4:+87379973 | MS.gene97601:CDS |
| AGCTTTGCCTCAAAATGGAA+AGG | 0.607753 | 7.4:+87384207 | MS.gene97601:CDS |
| AAAATCCTTGAAATATACAA+AGG | 0.617392 | 7.4:+87382805 | MS.gene97601:CDS |
| TTGCAAGCAAGCGTAACATA+CGG | 0.621980 | 7.4:-87380144 | None:intergenic |
| ACCACAACCCTATCAAAGCA+GGG | 0.658650 | 7.4:-87380315 | None:intergenic |
| GTGTGTGAGTTTCAACAACA+TGG | 0.665450 | 7.4:-87379937 | None:intergenic |
| ATGTTTGAAAGTATTCCACA+AGG | 0.713824 | 7.4:+87383981 | MS.gene97601:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAATTTAACTATTAA+TGG | - | chr7.4:87382561-87382580 | None:intergenic | 10.0% |
| !! | AATAAAATGCAATATATAAT+AGG | - | chr7.4:87381989-87382008 | None:intergenic | 10.0% |
| !! | ATGAAATAAATAATTAAACA+AGG | - | chr7.4:87380371-87380390 | None:intergenic | 10.0% |
| !! | ATTCACTTAAAAATTAATTA+AGG | - | chr7.4:87383350-87383369 | None:intergenic | 10.0% |
| !!! | AAAAAAAAGTATAAAATAGA+AGG | - | chr7.4:87381385-87381404 | None:intergenic | 10.0% |
| !!! | AAAAATACAATTTTTTTAAG+AGG | - | chr7.4:87381432-87381451 | None:intergenic | 10.0% |
| !!! | AATATTCAATTTTTCAAAAA+TGG | - | chr7.4:87383490-87383509 | None:intergenic | 10.0% |
| !!! | AATATTGATTTTTTTTTCTT+CGG | + | chr7.4:87383095-87383114 | MS.gene97601:intron | 10.0% |
| !!! | TATTTTCAATTAATAATCTT+GGG | - | chr7.4:87383922-87383941 | None:intergenic | 10.0% |
| !!! | TATTTTCTTCAAAAAAAAAA+AGG | - | chr7.4:87381717-87381736 | None:intergenic | 10.0% |
| !! | AAAATAGACAAATTTCATTT+AGG | + | chr7.4:87383936-87383955 | MS.gene97601:intron | 15.0% |
| !! | AAATAGACAAATTTCATTTA+GGG | + | chr7.4:87383937-87383956 | MS.gene97601:intron | 15.0% |
| !! | AATATAAACTTACAATTCAA+TGG | + | chr7.4:87380445-87380464 | MS.gene97601:intron | 15.0% |
| !! | CGTAACAAAATTAATAAATA+AGG | - | chr7.4:87381175-87381194 | None:intergenic | 15.0% |
| !! | CTTAAAAAAACTATAACAAA+CGG | + | chr7.4:87382436-87382455 | MS.gene97601:intron | 15.0% |
| !! | GAAGAAAAAAAAATCAATAT+TGG | - | chr7.4:87383096-87383115 | None:intergenic | 15.0% |
| !! | TATATACCTAAATTATTGAT+AGG | + | chr7.4:87381862-87381881 | MS.gene97601:intron | 15.0% |
| !! | TTAAAAAAACTATAACAAAC+GGG | + | chr7.4:87382437-87382456 | MS.gene97601:intron | 15.0% |
| !! | TTAAGTGAATTTGAAAAATT+GGG | + | chr7.4:87383360-87383379 | MS.gene97601:intron | 15.0% |
| !! | TTAATAAATAAGGATAAGAA+AGG | - | chr7.4:87381165-87381184 | None:intergenic | 15.0% |
| !! | TTTAAGTGAATTTGAAAAAT+TGG | + | chr7.4:87383359-87383378 | MS.gene97601:intron | 15.0% |
| !! | TTTATAATATGAATCTGAAA+AGG | + | chr7.4:87383749-87383768 | MS.gene97601:intron | 15.0% |
| !!! | ACTTATATGACTAATTTTAT+TGG | + | chr7.4:87383278-87383297 | MS.gene97601:intron | 15.0% |
| !!! | ATATTGATTTTTTTTTCTTC+GGG | + | chr7.4:87383096-87383115 | MS.gene97601:intron | 15.0% |
| !!! | ATATTTTCTTAGAATGAAAT+TGG | - | chr7.4:87381294-87381313 | None:intergenic | 15.0% |
| !!! | CTATTTTCAATTAATAATCT+TGG | - | chr7.4:87383923-87383942 | None:intergenic | 15.0% |
| !!! | CTTTTTTTTTTTCACTTAAA+TGG | - | chr7.4:87383467-87383486 | None:intergenic | 15.0% |
| !!! | TATTTTACTAAAATTAGTGA+GGG | + | chr7.4:87383788-87383807 | MS.gene97601:intron | 15.0% |
| !!! | TTAATTTGATATCATCTAAA+AGG | + | chr7.4:87383017-87383036 | MS.gene97601:intron | 15.0% |
| !!! | TTACAAAAATCTAAAATCAT+TGG | - | chr7.4:87380401-87380420 | None:intergenic | 15.0% |
| !!! | TTATTTTACTAAAATTAGTG+AGG | + | chr7.4:87383787-87383806 | MS.gene97601:intron | 15.0% |
| !!! | TTTTTTAGATGTAATTTGTT+AGG | - | chr7.4:87381261-87381280 | None:intergenic | 15.0% |
| !! | AAAATCCTTGAAATATACAA+AGG | + | chr7.4:87382805-87382824 | MS.gene97601:CDS | 20.0% |
| !! | AATTATCCACAATTATTCAA+AGG | + | chr7.4:87383310-87383329 | MS.gene97601:intron | 20.0% |
| !! | ATTCAATTTCCTTACTAATA+CGG | - | chr7.4:87383436-87383455 | None:intergenic | 20.0% |
| !! | TAAACAAGGTAAACAAAATT+AGG | - | chr7.4:87380357-87380376 | None:intergenic | 20.0% |
| !! | TGTTAGAATGACATATAATT+TGG | - | chr7.4:87384048-87384067 | None:intergenic | 20.0% |
| !! | TTCTACCAAAATTAACTAAT+AGG | + | chr7.4:87382531-87382550 | MS.gene97601:intron | 20.0% |
| !!! | AACAAATCATTTAGTTTGTT+TGG | + | chr7.4:87382248-87382267 | MS.gene97601:intron | 20.0% |
| !!! | ATACATTCTACATTTTTTTG+AGG | - | chr7.4:87381553-87381572 | None:intergenic | 20.0% |
| !!! | CATGTGAGTTTTTTTTTTTT+TGG | - | chr7.4:87383545-87383564 | None:intergenic | 20.0% |
| !!! | CGTTTGTTATAGTTTTTTTA+AGG | - | chr7.4:87382438-87382457 | None:intergenic | 20.0% |
| !!! | CTGTAATACTAATTTTTATC+AGG | - | chr7.4:87381455-87381474 | None:intergenic | 20.0% |
| !!! | GATTTTTTTCATGTGAATTT+TGG | - | chr7.4:87382791-87382810 | None:intergenic | 20.0% |
| !!! | TACATTCTACATTTTTTTGA+GGG | - | chr7.4:87381552-87381571 | None:intergenic | 20.0% |
| !!! | TATTTATAGGTTGAATTTCA+AGG | + | chr7.4:87382645-87382664 | MS.gene97601:intron | 20.0% |
| !!! | TCATTGATTTGTTGAATATT+TGG | - | chr7.4:87382759-87382778 | None:intergenic | 20.0% |
| !!! | TGACTAATTTTATTGGTTTT+TGG | + | chr7.4:87383285-87383304 | MS.gene97601:intron | 20.0% |
| !!! | TGCTAAAGAATATGAAATTT+TGG | + | chr7.4:87384342-87384361 | MS.gene97601:CDS | 20.0% |
| !!! | TTGAAATTACTTGGTTTTAT+GGG | + | chr7.4:87382980-87382999 | MS.gene97601:intron | 20.0% |
| !!! | TTTTTTAGATGGAATTTGTT+AGG | - | chr7.4:87381662-87381681 | None:intergenic | 20.0% |
| ! | AAATCAATGTATTTGTGTAG+TGG | + | chr7.4:87381505-87381524 | MS.gene97601:intron | 25.0% |
| ! | AATATCATGTTCATTAATGC+TGG | + | chr7.4:87384304-87384323 | MS.gene97601:CDS | 25.0% |
| ! | AATATGAATCTGAAAAGGAA+AGG | + | chr7.4:87383754-87383773 | MS.gene97601:intron | 25.0% |
| ! | AATTAATTAAGGTAAGACCT+AGG | - | chr7.4:87383339-87383358 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr7.4:87381035-87381054 | MS.gene97601:intron | 25.0% |
| ! | AGTTTCAAGCACATATAATA+AGG | - | chr7.4:87383671-87383690 | None:intergenic | 25.0% |
| ! | ATAACTAAGTATGAGTACTT+TGG | + | chr7.4:87382715-87382734 | MS.gene97601:CDS | 25.0% |
| ! | ATATGAATCTGAAAAGGAAA+GGG | + | chr7.4:87383755-87383774 | MS.gene97601:intron | 25.0% |
| ! | ATCAATAATTGAAGCAAATC+TGG | - | chr7.4:87384284-87384303 | None:intergenic | 25.0% |
| ! | ATGTACCAAAACTATCTATA+AGG | - | chr7.4:87383395-87383414 | None:intergenic | 25.0% |
| ! | ATTTAATAAAGCAAATGAGC+AGG | - | chr7.4:87381625-87381644 | None:intergenic | 25.0% |
| ! | CACCAAAAAAAAAAAAAGAC+TGG | + | chr7.4:87381078-87381097 | MS.gene97601:intron | 25.0% |
| ! | CATATCCTTTGTATATTTCA+AGG | - | chr7.4:87382813-87382832 | None:intergenic | 25.0% |
| ! | GAAATATACAAAGGATATGA+GGG | + | chr7.4:87382814-87382833 | MS.gene97601:CDS | 25.0% |
| ! | GAATGTCATTCTAATATGTA+TGG | - | chr7.4:87383840-87383859 | None:intergenic | 25.0% |
| ! | GCAAAATATCCATCAATTAA+GGG | + | chr7.4:87382895-87382914 | MS.gene97601:CDS | 25.0% |
| ! | GGTAATCCTATCAATAATTT+AGG | - | chr7.4:87381871-87381890 | None:intergenic | 25.0% |
| ! | TAACTAAGTATGAGTACTTT+GGG | + | chr7.4:87382716-87382735 | MS.gene97601:CDS | 25.0% |
| ! | TACAGTATATTAGTCATCAA+GGG | - | chr7.4:87383616-87383635 | None:intergenic | 25.0% |
| ! | TATATATGACCAAGTTTACA+TGG | - | chr7.4:87381848-87381867 | None:intergenic | 25.0% |
| ! | TATGATGAAAATAGTGATCA+TGG | + | chr7.4:87380259-87380278 | MS.gene97601:CDS | 25.0% |
| ! | TGAAATATACAAAGGATATG+AGG | + | chr7.4:87382813-87382832 | MS.gene97601:CDS | 25.0% |
| ! | TGATATCCTAGATGAAAAAT+GGG | - | chr7.4:87383639-87383658 | None:intergenic | 25.0% |
| ! | TGCAAAATATCCATCAATTA+AGG | + | chr7.4:87382894-87382913 | MS.gene97601:CDS | 25.0% |
| ! | TTCAAAAAAAAAAAGGCAAG+AGG | - | chr7.4:87381710-87381729 | None:intergenic | 25.0% |
| ! | TTCAAATGAGAGAGAAAATA+TGG | - | chr7.4:87382327-87382346 | None:intergenic | 25.0% |
| ! | TTCAATTTCCTTACTAATAC+GGG | - | chr7.4:87383435-87383454 | None:intergenic | 25.0% |
| ! | TTCCATTAACTTTCTTGAAT+AGG | - | chr7.4:87382696-87382715 | None:intergenic | 25.0% |
| ! | TTCGGGAAATTTGAAAAAAT+AGG | + | chr7.4:87383113-87383132 | MS.gene97601:intron | 25.0% |
| ! | TTGATATCCTAGATGAAAAA+TGG | - | chr7.4:87383640-87383659 | None:intergenic | 25.0% |
| !! | AAATTGATTCCCTTAATTGA+TGG | - | chr7.4:87382907-87382926 | None:intergenic | 25.0% |
| !! | AATTTTTATGTAGTCAGATG+AGG | + | chr7.4:87383176-87383195 | MS.gene97601:intron | 25.0% |
| !! | CTCTTTTTCTTGAAATTACT+TGG | + | chr7.4:87382971-87382990 | MS.gene97601:intron | 25.0% |
| !! | CTTTACCTTATAGATAGTTT+TGG | + | chr7.4:87383387-87383406 | MS.gene97601:intron | 25.0% |
| !! | GAAAGCCTATTAGTTAATTT+TGG | - | chr7.4:87382539-87382558 | None:intergenic | 25.0% |
| !! | TTGAATATTTGGTTTACTTG+TGG | - | chr7.4:87382748-87382767 | None:intergenic | 25.0% |
| !!! | CACCAGTCTTTTTTTTTTTT+TGG | - | chr7.4:87381083-87381102 | None:intergenic | 25.0% |
| !!! | CAGTCTTTTTTTTTTTTTGG+TGG | - | chr7.4:87381080-87381099 | None:intergenic | 25.0% |
| !!! | CTTGAAATTACTTGGTTTTA+TGG | + | chr7.4:87382979-87382998 | MS.gene97601:intron | 25.0% |
| !!! | GTGTTTTATTTTGTCTACTA+TGG | + | chr7.4:87381935-87381954 | MS.gene97601:intron | 25.0% |
| !!! | TAACTTTGAAGCAATTTCAA+TGG | - | chr7.4:87380089-87380108 | None:intergenic | 25.0% |
| !!! | TAGTTTGATAACATTTTGCT+TGG | - | chr7.4:87380698-87380717 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTGGTGGCT+GGG | - | chr7.4:87381075-87381094 | None:intergenic | 25.0% |
| AAAAAAAAAGGCAAGAGGAT+AGG | - | chr7.4:87381705-87381724 | None:intergenic | 30.0% | |
| AAAGTATAGCTATATTCACG+AGG | - | chr7.4:87381139-87381158 | None:intergenic | 30.0% | |
| AACCTAATAAAGCAAATGAG+CGG | - | chr7.4:87381225-87381244 | None:intergenic | 30.0% | |
| AAGAGGTGACAATAGAATTA+TGG | - | chr7.4:87381415-87381434 | None:intergenic | 30.0% | |
| AAGGTAAACAAAATTAGGCA+AGG | - | chr7.4:87380352-87380371 | None:intergenic | 30.0% | |
| AATAGTGATCATGGTTATGT+TGG | + | chr7.4:87380268-87380287 | MS.gene97601:CDS | 30.0% | |
| AATCATACGATGAAGAATCA+TGG | - | chr7.4:87382094-87382113 | None:intergenic | 30.0% | |
| AATTTCCATCACTCCAATAA+TGG | - | chr7.4:87384416-87384435 | None:intergenic | 30.0% | |
| ACCAAGTTTACATGGAAATT+AGG | - | chr7.4:87381840-87381859 | None:intergenic | 30.0% | |
| AGGTTACCTTTGAATAATTG+TGG | - | chr7.4:87383319-87383338 | None:intergenic | 30.0% | |
| ATAAAAATATGCAAGGTCTG+GGG | + | chr7.4:87381042-87381061 | MS.gene97601:intron | 30.0% | |
| ATTCTTCATCGTATGATTGA+GGG | + | chr7.4:87382096-87382115 | MS.gene97601:intron | 30.0% | |
| CAAATGAGCAGGAAAAAATT+AGG | - | chr7.4:87381614-87381633 | None:intergenic | 30.0% | |
| CAAATGAGCGGAAAAAAATT+AGG | - | chr7.4:87381213-87381232 | None:intergenic | 30.0% | |
| CAATTATTCAAAGGTAACCT+AGG | + | chr7.4:87383319-87383338 | MS.gene97601:intron | 30.0% | |
| CATAAAAATATGCAAGGTCT+GGG | + | chr7.4:87381041-87381060 | MS.gene97601:intron | 30.0% | |
| CCAAGTTTACATGGAAATTA+GGG | - | chr7.4:87381839-87381858 | None:intergenic | 30.0% | |
| CTCAATAAAATAGTGCTTAC+TGG | + | chr7.4:87384094-87384113 | MS.gene97601:intron | 30.0% | |
| GAACTGGTCATTAATACAAA+GGG | - | chr7.4:87383881-87383900 | None:intergenic | 30.0% | |
| GACCTATTCAAGAAAGTTAA+TGG | + | chr7.4:87382691-87382710 | MS.gene97601:CDS | 30.0% | |
| GTACAGTATATTAGTCATCA+AGG | - | chr7.4:87383617-87383636 | None:intergenic | 30.0% | |
| TGAACTGGTCATTAATACAA+AGG | - | chr7.4:87383882-87383901 | None:intergenic | 30.0% | |
| TTAATAGTCCCGTATTAGTA+AGG | + | chr7.4:87383424-87383443 | MS.gene97601:intron | 30.0% | |
| ! | CTCAACTTGTTTGAAATCAT+TGG | + | chr7.4:87380046-87380065 | MS.gene97601:CDS | 30.0% |
| ! | GTAGAGTAAAATTTAGTTCG+TGG | + | chr7.4:87383238-87383257 | MS.gene97601:intron | 30.0% |
| ! | GTAGCATTGTTAGAGTTTTT+GGG | + | chr7.4:87380209-87380228 | MS.gene97601:CDS | 30.0% |
| ! | GTATCAACTTTGGTTGATAT+TGG | + | chr7.4:87382838-87382857 | MS.gene97601:CDS | 30.0% |
| ! | TTGTTTGAAATCATTGGTGA+TGG | + | chr7.4:87380052-87380071 | MS.gene97601:CDS | 30.0% |
| !! | ATCAGTTTTGTGTTTGTTTG+CGG | + | chr7.4:87382204-87382223 | MS.gene97601:intron | 30.0% |
| !! | ATGTTTGAAAGTATTCCACA+AGG | + | chr7.4:87383981-87384000 | MS.gene97601:CDS | 30.0% |
| !! | ATTTCAAGAAAAAGAGTACC+TGG | - | chr7.4:87382967-87382986 | None:intergenic | 30.0% |
| !! | TAGCAAAAGTATTTACCAGA+AGG | - | chr7.4:87380241-87380260 | None:intergenic | 30.0% |
| !!! | ATTTTTTCCGCTGTCAATTT+CGG | - | chr7.4:87380920-87380939 | None:intergenic | 30.0% |
| !!! | CTTTTTTTTTTTTTGGTGGC+TGG | - | chr7.4:87381076-87381095 | None:intergenic | 30.0% |
| AAATGGAAAGGTGATTCTTG+TGG | + | chr7.4:87384219-87384238 | MS.gene97601:CDS | 35.0% | |
| AACAATGCTACCATCATTGT+TGG | - | chr7.4:87380200-87380219 | None:intergenic | 35.0% | |
| AGCGGAAAAAATAAAACCAG+AGG | + | chr7.4:87380928-87380947 | MS.gene97601:intron | 35.0% | |
| AGGAGATACCATAATGCTTA+AGG | + | chr7.4:87384001-87384020 | MS.gene97601:CDS | 35.0% | |
| ATCATGTTCATTAATGCTGG+TGG | + | chr7.4:87384307-87384326 | MS.gene97601:CDS | 35.0% | |
| CAAGAGGATAGGAATGAAAT+TGG | - | chr7.4:87381694-87381713 | None:intergenic | 35.0% | |
| CCCTAATTTCCATGTAAACT+TGG | + | chr7.4:87381836-87381855 | MS.gene97601:intron | 35.0% | |
| GATACCAACCTTAAGCATTA+TGG | - | chr7.4:87384012-87384031 | None:intergenic | 35.0% | |
| GATACCATAATGCTTAAGGT+TGG | + | chr7.4:87384005-87384024 | MS.gene97601:intron | 35.0% | |
| GATTCTTCATCGTATGATTG+AGG | + | chr7.4:87382095-87382114 | MS.gene97601:intron | 35.0% | |
| GCATAAAAATATGCAAGGTC+TGG | + | chr7.4:87381040-87381059 | MS.gene97601:intron | 35.0% | |
| TACAAAGCTTTGCCTCAAAA+TGG | + | chr7.4:87384202-87384221 | MS.gene97601:CDS | 35.0% | |
| TATCCCTATTTCGTTGTTCT+AGG | + | chr7.4:87384126-87384145 | MS.gene97601:intron | 35.0% | |
| TCTAGGCTGTATGTCATAAT+TGG | + | chr7.4:87384143-87384162 | MS.gene97601:intron | 35.0% | |
| TGTTGTGCTTTCTCCATTAT+TGG | + | chr7.4:87384400-87384419 | MS.gene97601:CDS | 35.0% | |
| TTCTTGAATAGGTCAATCTC+TGG | - | chr7.4:87382685-87382704 | None:intergenic | 35.0% | |
| TTGAGTAATTAACTCTCCTC+TGG | - | chr7.4:87380947-87380966 | None:intergenic | 35.0% | |
| TTTCTCCATTATTGGAGTGA+TGG | + | chr7.4:87384408-87384427 | MS.gene97601:CDS | 35.0% | |
| ! | AGAATCACCTTTCCATTTTG+AGG | - | chr7.4:87384217-87384236 | None:intergenic | 35.0% |
| ! | AGTCATACACGTAAGTTGAA+TGG | - | chr7.4:87383518-87383537 | None:intergenic | 35.0% |
| ! | CATTTTCAATCACTTGAGGA+AGG | - | chr7.4:87382933-87382952 | None:intergenic | 35.0% |
| ! | GACGATTCCCGAATATTTTA+GGG | + | chr7.4:87383588-87383607 | MS.gene97601:intron | 35.0% |
| ! | GATGCATTTTCAATCACTTG+AGG | - | chr7.4:87382937-87382956 | None:intergenic | 35.0% |
| ! | GGTAGCATTGTTAGAGTTTT+TGG | + | chr7.4:87380208-87380227 | MS.gene97601:CDS | 35.0% |
| ! | TCAACTTTGGTTGATATTGG+AGG | + | chr7.4:87382841-87382860 | MS.gene97601:CDS | 35.0% |
| ! | TGACGATTCCCGAATATTTT+AGG | + | chr7.4:87383587-87383606 | MS.gene97601:intron | 35.0% |
| ! | TTCCGCTCATTTGCTTTATT+AGG | + | chr7.4:87381220-87381239 | MS.gene97601:intron | 35.0% |
| !! | AAGAAAAAGAGTACCTGGAA+TGG | - | chr7.4:87382962-87382981 | None:intergenic | 35.0% |
| !! | ACTGTACCCATTTTTCATCT+AGG | + | chr7.4:87383630-87383649 | MS.gene97601:intron | 35.0% |
| !! | AGAAAAAGAGTACCTGGAAT+GGG | - | chr7.4:87382961-87382980 | None:intergenic | 35.0% |
| !! | ATATGAGGGAGTATCAACTT+TGG | + | chr7.4:87382828-87382847 | MS.gene97601:CDS | 35.0% |
| !! | CTCTTCTGTCTATTTCTACT+CGG | + | chr7.4:87380173-87380192 | MS.gene97601:CDS | 35.0% |
| !!! | GAAATTTTGGCTCAACAATC+TGG | + | chr7.4:87384355-87384374 | MS.gene97601:CDS | 35.0% |
| !!! | TACCTTTGAAGCTTCTTTTG+TGG | + | chr7.4:87383813-87383832 | MS.gene97601:intron | 35.0% |
| AACATGGCTCACTTTGTCAT+TGG | - | chr7.4:87379924-87379943 | None:intergenic | 40.0% | |
| AACTGCTGGAAACACCAAAT+TGG | - | chr7.4:87380008-87380027 | None:intergenic | 40.0% | |
| AAGGGAGCCCTAAAATATTC+GGG | - | chr7.4:87383598-87383617 | None:intergenic | 40.0% | |
| ACAGCCTAGAACAACGAAAT+AGG | - | chr7.4:87384133-87384152 | None:intergenic | 40.0% | |
| AGCATTATGGTATCTCCTTG+TGG | - | chr7.4:87383999-87384018 | None:intergenic | 40.0% | |
| AGCTTTGCCTCAAAATGGAA+AGG | + | chr7.4:87384207-87384226 | MS.gene97601:CDS | 40.0% | |
| ATTAGTGGGAAATGTGTTGC+AGG | + | chr7.4:87380608-87380627 | MS.gene97601:intron | 40.0% | |
| ATTGCAGCATTAAGAACTGC+TGG | - | chr7.4:87380022-87380041 | None:intergenic | 40.0% | |
| CAAGGGAGCCCTAAAATATT+CGG | - | chr7.4:87383599-87383618 | None:intergenic | 40.0% | |
| CAGCCTAGAACAACGAAATA+GGG | - | chr7.4:87384132-87384151 | None:intergenic | 40.0% | |
| CATTTAGGGATTGAGCATGT+TGG | + | chr7.4:87383951-87383970 | MS.gene97601:intron | 40.0% | |
| GACCACAAAAGAAGCTTCAA+AGG | - | chr7.4:87383818-87383837 | None:intergenic | 40.0% | |
| GCAAATCTGGATGCATTTGT+TGG | - | chr7.4:87384271-87384290 | None:intergenic | 40.0% | |
| GCTCACTTTGTCATTGGAAT+AGG | - | chr7.4:87379918-87379937 | None:intergenic | 40.0% | |
| GGCTGTATGTCATAATTGGT+CGG | + | chr7.4:87384147-87384166 | MS.gene97601:intron | 40.0% | |
| GTCTCGTTGTCATCTATTTG+TGG | - | chr7.4:87379962-87379981 | None:intergenic | 40.0% | |
| GTGTGTGAGTTTCAACAACA+TGG | - | chr7.4:87379940-87379959 | None:intergenic | 40.0% | |
| GTTGATATTGGAGGTGGAAA+TGG | + | chr7.4:87382850-87382869 | MS.gene97601:CDS | 40.0% | |
| TAACACACCGAAATTGACAG+CGG | + | chr7.4:87380910-87380929 | MS.gene97601:intron | 40.0% | |
| TATGGTACTAGGTGCCAATT+TGG | + | chr7.4:87379991-87380010 | MS.gene97601:CDS | 40.0% | |
| TGCATAATACATGCACGAGT+CGG | - | chr7.4:87380758-87380777 | None:intergenic | 40.0% | |
| TTGCAAGCAAGCGTAACATA+CGG | - | chr7.4:87380147-87380166 | None:intergenic | 40.0% | |
| ! | AACACTCTGATTTGCCGAAT+CGG | + | chr7.4:87380116-87380135 | MS.gene97601:CDS | 40.0% |
| ! | ACTTTGGTTGATATTGGAGG+TGG | + | chr7.4:87382844-87382863 | MS.gene97601:CDS | 40.0% |
| ! | TGAGCATAGCTCAGTTGATA+TGG | + | chr7.4:87381012-87381031 | MS.gene97601:intron | 40.0% |
| !! | TTTGTTGGTTCTGGACATTC+TGG | - | chr7.4:87384256-87384275 | None:intergenic | 40.0% |
| !!! | GGTGCGATGCATTTTTTAGA+TGG | - | chr7.4:87381673-87381692 | None:intergenic | 40.0% |
| AACATACGGTCTAGCCGATT+CGG | - | chr7.4:87380133-87380152 | None:intergenic | 45.0% | |
| ACACTCTCAGCTATGGTACT+AGG | + | chr7.4:87379980-87379999 | MS.gene97601:CDS | 45.0% | |
| ACCACAACCCTATCAAAGCA+GGG | - | chr7.4:87380318-87380337 | None:intergenic | 45.0% | |
| ATGTGTCACCCTGCTTTGAT+AGG | + | chr7.4:87380307-87380326 | MS.gene97601:CDS | 45.0% | |
| CCCTTTACAATAAACCCGAG+CGG | + | chr7.4:87382023-87382042 | MS.gene97601:intron | 45.0% | |
| CCGCTCGGGTTTATTGTAAA+GGG | - | chr7.4:87382026-87382045 | None:intergenic | 45.0% | |
| GAAAATGCATCACCCATTCC+AGG | + | chr7.4:87382946-87382965 | MS.gene97601:CDS | 45.0% | |
| GCATAATACATGCACGAGTC+GGG | - | chr7.4:87380757-87380776 | None:intergenic | 45.0% | |
| TACCACAACCCTATCAAAGC+AGG | - | chr7.4:87380319-87380338 | None:intergenic | 45.0% | |
| TCCGCTCGGGTTTATTGTAA+AGG | - | chr7.4:87382027-87382046 | None:intergenic | 45.0% | |
| TCTACTCGGACCAACAATGA+TGG | + | chr7.4:87380187-87380206 | MS.gene97601:CDS | 45.0% | |
| TGTGTCACCCTGCTTTGATA+GGG | + | chr7.4:87380308-87380327 | MS.gene97601:CDS | 45.0% | |
| TTAGGGATTGAGCATGTTGG+AGG | + | chr7.4:87383954-87383973 | MS.gene97601:intron | 45.0% | |
| ! | GATTGAGGGCTCGTTTGTTA+CGG | + | chr7.4:87382110-87382129 | MS.gene97601:intron | 45.0% |
| !! | CTGGATGCATTTGTTGGTTC+TGG | - | chr7.4:87384265-87384284 | None:intergenic | 45.0% |
| !! | GGCAAATCAGAGTGTTGAGT+TGG | - | chr7.4:87380112-87380131 | None:intergenic | 45.0% |
| !!! | GTTTTTGGGATCACACCTTC+TGG | + | chr7.4:87380223-87380242 | MS.gene97601:CDS | 45.0% |
| !! | AAATATTATAAAAGAAAATT+CGG | - | chr7.4:87381892-87381911 | None:intergenic | 5.0% |
| !! | ATATATATATATATATTAGT+GGG | + | chr7.4:87380594-87380613 | MS.gene97601:intron | 5.0% |
| !! | TATATATATATATATATTAG+TGG | + | chr7.4:87380593-87380612 | MS.gene97601:intron | 5.0% |
| !!! | AAAAAAAAGTATAAAATAAA+AGG | - | chr7.4:87381810-87381829 | None:intergenic | 5.0% |
| !!! | ATAAAAATTAAATTAATTTG+TGG | - | chr7.4:87383165-87383184 | None:intergenic | 5.0% |
| !!! | CATTTTAATAATATATTTAT+AGG | + | chr7.4:87382632-87382651 | MS.gene97601:intron | 5.0% |
| !!! | TTTATTTTATACTTTTTTTT+CGG | + | chr7.4:87381810-87381829 | MS.gene97601:intron | 5.0% |
| ACCCTGCTTTGATAGGGTTG+TGG | + | chr7.4:87380314-87380333 | MS.gene97601:CDS | 50.0% | |
| CAACGAGACACTCTCAGCTA+TGG | + | chr7.4:87379973-87379992 | MS.gene97601:CDS | 50.0% | |
| AATAAACCCGAGCGGAGCAC+GGG | + | chr7.4:87382031-87382050 | MS.gene97601:intron | 55.0% | |
| CAATAAACCCGAGCGGAGCA+CGG | + | chr7.4:87382030-87382049 | MS.gene97601:intron | 55.0% | |
| ! | TTTTTCACCCGTGCTCCGCT+CGG | - | chr7.4:87382041-87382060 | None:intergenic | 55.0% |
| ! | TTTTCACCCGTGCTCCGCTC+GGG | - | chr7.4:87382040-87382059 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 87379908 | 87384444 | 87379908 | ID=MS.gene97601 |
| chr7.4 | mRNA | 87379908 | 87384444 | 87379908 | ID=MS.gene97601.t1;Parent=MS.gene97601 |
| chr7.4 | exon | 87379908 | 87380335 | 87379908 | ID=MS.gene97601.t1.exon1;Parent=MS.gene97601.t1 |
| chr7.4 | CDS | 87379908 | 87380335 | 87379908 | ID=cds.MS.gene97601.t1;Parent=MS.gene97601.t1 |
| chr7.4 | exon | 87382654 | 87382967 | 87382654 | ID=MS.gene97601.t1.exon2;Parent=MS.gene97601.t1 |
| chr7.4 | CDS | 87382654 | 87382967 | 87382654 | ID=cds.MS.gene97601.t1;Parent=MS.gene97601.t1 |
| chr7.4 | exon | 87383958 | 87384022 | 87383958 | ID=MS.gene97601.t1.exon3;Parent=MS.gene97601.t1 |
| chr7.4 | CDS | 87383958 | 87384022 | 87383958 | ID=cds.MS.gene97601.t1;Parent=MS.gene97601.t1 |
| chr7.4 | exon | 87384148 | 87384444 | 87384148 | ID=MS.gene97601.t1.exon4;Parent=MS.gene97601.t1 |
| chr7.4 | CDS | 87384148 | 87384444 | 87384148 | ID=cds.MS.gene97601.t1;Parent=MS.gene97601.t1 |
| Gene Sequence |
| Protein sequence |
