Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97861.t1 | XP_003621050.1 | 97.9 | 239 | 5 | 0 | 1 | 239 | 1 | 239 | 3.60E-125 | 457.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97861.t1 | Q118F4 | 44.6 | 157 | 83 | 2 | 87 | 239 | 10 | 166 | 5.7e-31 | 136.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97861.t1 | G7KXR2 | 97.9 | 239 | 5 | 0 | 1 | 239 | 1 | 239 | 2.6e-125 | 457.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene97861 | -0.83768 | 4.51E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene97861 | 0.82582 | 3.80E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene97861 | -0.819044 | 1.43E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene97861 | -0.807426 | 5.09E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene97861 | -0.807602 | 4.67E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene97861 | -0.810618 | 1.05E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene97861 | -0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene050496 | MS.gene97861 | -0.836654 | 8.24E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene97861 | -0.83444 | 2.99E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene97861 | -0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene97861 | -0.81487 | 1.24E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene97861 | 0.80414 | 2.49E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene97861 | 0.838054 | 3.61E-57 | -1.69E-46 |
| MS.gene051366 | MS.gene97861 | 0.848178 | 7.23E-60 | -1.69E-46 |
| MS.gene051367 | MS.gene97861 | 0.802498 | 5.45E-49 | -1.69E-46 |
| MS.gene051973 | MS.gene97861 | 0.804121 | 2.52E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene97861 | -0.822472 | 2.33E-53 | -1.69E-46 |
| MS.gene053278 | MS.gene97861 | 0.818048 | 2.40E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene97861 | -0.80269 | 4.98E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene97861 | 0.802231 | 6.19E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene97861 | -0.808624 | 2.83E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene97861 | -0.829808 | 4.18E-55 | -1.69E-46 |
| MS.gene054959 | MS.gene97861 | 0.846534 | 2.05E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene97861 | -0.836982 | 6.80E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene97861 | -0.819766 | 9.78E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene97861 | -0.817882 | 2.62E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene97861 | -0.813981 | 1.94E-51 | -1.69E-46 |
| MS.gene055942 | MS.gene97861 | 0.816208 | 6.23E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene97861 | -0.83774 | 4.35E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene97861 | -0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene056988 | MS.gene97861 | 0.800471 | 1.42E-48 | -1.69E-46 |
| MS.gene05837 | MS.gene97861 | -0.800865 | 1.18E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene97861 | -0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene97861 | -0.830165 | 3.42E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene97861 | -0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene97861 | -0.857239 | 1.87E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene97861 | -0.831193 | 1.92E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene97861 | -0.839592 | 1.45E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene97861 | -0.821489 | 3.93E-53 | -1.69E-46 |
| MS.gene059770 | MS.gene97861 | 0.809438 | 1.89E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene97861 | -0.80212 | 6.52E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene97861 | -0.802246 | 6.14E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene97861 | -0.802896 | 4.51E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene97861 | -0.838133 | 3.45E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene97861 | -0.807146 | 5.83E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97861.t1 | MTR_7g006560 | 97.908 | 239 | 5 | 0 | 1 | 239 | 1 | 239 | 3.57e-173 | 484 |
| MS.gene97861.t1 | MTR_8g096130 | 69.663 | 178 | 54 | 0 | 62 | 239 | 34 | 211 | 6.63e-88 | 266 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97861.t1 | AT5G13420 | 73.529 | 204 | 54 | 0 | 36 | 239 | 31 | 234 | 1.09e-107 | 318 |
Find 48 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGGCTTCTTCACTTT+CGG | 0.265437 | 7.2:+92273382 | None:intergenic |
| TGCATGTGTCCCTTCAATTA+AGG | 0.343064 | 7.2:+92276267 | MS.gene97861:CDS |
| CTTATTGAAAGTGGTGTTAG+AGG | 0.347970 | 7.2:+92275135 | MS.gene97861:CDS |
| GATCTGGATCGAAGAGATTC+TGG | 0.349569 | 7.2:-92273446 | None:intergenic |
| TGAAGAACCGTCCTCTTTGC+AGG | 0.353042 | 7.2:-92275039 | None:intergenic |
| GTGCTTACAATGATCAATTC+AGG | 0.381631 | 7.2:+92275455 | MS.gene97861:CDS |
| AAAGAAGCGCGGTTTGTGTT+TGG | 0.385626 | 7.2:-92273422 | None:intergenic |
| AAGACATTGACAGTGCATAC+TGG | 0.398567 | 7.2:+92276044 | MS.gene97861:CDS |
| GGAATCTTAATATACACATT+GGG | 0.407298 | 7.2:-92276235 | None:intergenic |
| GAACCATAGAAGCTGCAAAA+TGG | 0.407939 | 7.2:+92276191 | MS.gene97861:CDS |
| TAATCTCTGCCGACCCGTTA+CGG | 0.408310 | 7.2:+92275101 | MS.gene97861:CDS |
| CTAACACCACTTTCAATAAG+AGG | 0.417790 | 7.2:-92275132 | None:intergenic |
| GCGATAACTTCCTTAATTGA+AGG | 0.430140 | 7.2:-92276277 | None:intergenic |
| TGCAAAATGGCTTCATAAAG+TGG | 0.434093 | 7.2:+92276204 | MS.gene97861:CDS |
| TGCTCACAAACAGATGGAAA+TGG | 0.453362 | 7.2:+92275012 | MS.gene97861:CDS |
| GGGACACATGCAGCTGTAGC+TGG | 0.457283 | 7.2:-92276256 | None:intergenic |
| CACGTTCACACTTATTCCAT+TGG | 0.457925 | 7.2:-92276299 | None:intergenic |
| TGCAGGGAACTTGTGCAAGC+AGG | 0.463242 | 7.2:+92276019 | MS.gene97861:intron |
| AAATCATTTGTATTGTTGAA+AGG | 0.476234 | 7.2:-92273488 | None:intergenic |
| AGAGGAATCAGATCCGTAAC+GGG | 0.477720 | 7.2:-92275114 | None:intergenic |
| CTGATTCCTCTTATTGAAAG+TGG | 0.490876 | 7.2:+92275126 | MS.gene97861:CDS |
| TCAATTTATGATCAAACTGA+TGG | 0.501880 | 7.2:+92276112 | MS.gene97861:CDS |
| CGATAACTTCCTTAATTGAA+GGG | 0.507817 | 7.2:-92276276 | None:intergenic |
| ATTAAGGAAGTTATCGCCAA+TGG | 0.509849 | 7.2:+92276283 | MS.gene97861:CDS |
| TGGAATCTTAATATACACAT+TGG | 0.517086 | 7.2:-92276236 | None:intergenic |
| TTTCTGTTGAAGTATCTCCT+AGG | 0.521652 | 7.2:+92276149 | MS.gene97861:CDS |
| AGAAACAAGGGCAGAGTCCA+TGG | 0.521731 | 7.2:+92275073 | MS.gene97861:CDS |
| CATGATCTTTATGAGAAACA+AGG | 0.525914 | 7.2:+92275060 | MS.gene97861:CDS |
| AGACATTGACAGTGCATACT+GGG | 0.538449 | 7.2:+92276045 | MS.gene97861:CDS |
| ACCTCAAAGACGTTACAAAA+CGG | 0.539336 | 7.2:-92273556 | None:intergenic |
| GCAGGGAACTTGTGCAAGCA+GGG | 0.547808 | 7.2:+92276020 | MS.gene97861:intron |
| TCAGTATCCTCAGCAAGCCT+AGG | 0.564022 | 7.2:-92276166 | None:intergenic |
| ATTAGATGCTCACAAACAGA+TGG | 0.579685 | 7.2:+92275006 | MS.gene97861:CDS |
| GATCAAACTGATGGAGGTGA+TGG | 0.584623 | 7.2:+92276121 | MS.gene97861:CDS |
| AAGAGGAATCAGATCCGTAA+CGG | 0.596662 | 7.2:-92275115 | None:intergenic |
| ATGATCTTTATGAGAAACAA+GGG | 0.602950 | 7.2:+92275061 | MS.gene97861:CDS |
| ATTTATGATCAAACTGATGG+AGG | 0.617182 | 7.2:+92276115 | MS.gene97861:CDS |
| TGGAGTTCCTGCAAAGAGGA+CGG | 0.623273 | 7.2:+92275032 | MS.gene97861:CDS |
| ATACTGGGAACTTGTAGTGA+AGG | 0.629191 | 7.2:+92276060 | MS.gene97861:CDS |
| AGGCTTGCTGAGGATACTGA+AGG | 0.632568 | 7.2:+92276169 | MS.gene97861:CDS |
| CGGCAGAGATTATCATACCA+TGG | 0.638956 | 7.2:-92275090 | None:intergenic |
| GAATCTTAATATACACATTG+GGG | 0.640842 | 7.2:-92276234 | None:intergenic |
| GAAATGGAGTTCCTGCAAAG+AGG | 0.646124 | 7.2:+92275028 | MS.gene97861:CDS |
| GAATCAGATCCGTAACGGGT+CGG | 0.659162 | 7.2:-92275110 | None:intergenic |
| AGTATCTCCTAGGCTTGCTG+AGG | 0.671909 | 7.2:+92276159 | MS.gene97861:CDS |
| GAGATTCTGGTAAAGAAGCG+CGG | 0.678266 | 7.2:-92273433 | None:intergenic |
| TTCTTAAAGAAGAAGCAGAG+AGG | 0.689999 | 7.2:-92273520 | None:intergenic |
| AGGCGTCACTAGCAACCCAG+CGG | 0.791833 | 7.2:+92275155 | MS.gene97861:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTATTAAAATTTT+TGG | + | chr7.2:92274253-92274272 | MS.gene97861:intron | 0.0% |
| !!! | ATTAAATACTTTTAATTTTC+AGG | + | chr7.2:92274206-92274225 | MS.gene97861:intron | 10.0% |
| !! | GTAAAAAAAAATTACACTAT+CGG | + | chr7.2:92274174-92274193 | MS.gene97861:intron | 15.0% |
| !! | TATAAAAAAAATAGAAATCG+AGG | - | chr7.2:92275875-92275894 | None:intergenic | 15.0% |
| !! | TCTATATGACATTATTTAAT+TGG | - | chr7.2:92273863-92273882 | None:intergenic | 15.0% |
| !!! | AAATTTGAAAGAAAAACTTT+TGG | - | chr7.2:92275503-92275522 | None:intergenic | 15.0% |
| !!! | ATTTCTATTTTTTTTATAGG+AGG | + | chr7.2:92275877-92275896 | MS.gene97861:intron | 15.0% |
| !!! | TCGATTTCTATTTTTTTTAT+AGG | + | chr7.2:92275874-92275893 | MS.gene97861:intron | 15.0% |
| !!! | TTTCTATTTTTTTTATAGGA+GGG | + | chr7.2:92275878-92275897 | MS.gene97861:intron | 15.0% |
| !! | AAAATAGAACATTAAACTCA+CGG | - | chr7.2:92275966-92275985 | None:intergenic | 20.0% |
| !! | AAACTAAATATACTTTGTGA+AGG | - | chr7.2:92275640-92275659 | None:intergenic | 20.0% |
| !! | AAATCATTTGTATTGTTGAA+AGG | - | chr7.2:92273491-92273510 | None:intergenic | 20.0% |
| !! | AATGTTTCAAAAATCAATAC+TGG | + | chr7.2:92275294-92275313 | MS.gene97861:intron | 20.0% |
| !! | AGAGATTAATCTCTAAATAA+TGG | + | chr7.2:92273982-92274001 | MS.gene97861:intron | 20.0% |
| !! | ATATATAAAGAGTTGCATTA+TGG | + | chr7.2:92274129-92274148 | MS.gene97861:intron | 20.0% |
| !! | TAATGTCATATAGATATTTG+TGG | + | chr7.2:92273869-92273888 | MS.gene97861:intron | 20.0% |
| !! | TCATATTCATTATAAACTTG+AGG | - | chr7.2:92274914-92274933 | None:intergenic | 20.0% |
| !!! | AAAGTATATTTAGTTTAGCT+TGG | + | chr7.2:92275644-92275663 | MS.gene97861:intron | 20.0% |
| !!! | AATGTTCTATTTTTAATTCG+TGG | + | chr7.2:92275973-92275992 | MS.gene97861:intron | 20.0% |
| !!! | ATTTTTGAAACATTATTCCT+AGG | - | chr7.2:92275288-92275307 | None:intergenic | 20.0% |
| !!! | TTCTATTTTTTTTATAGGAG+GGG | + | chr7.2:92275879-92275898 | MS.gene97861:intron | 20.0% |
| !!! | TTTTGATTTTTATACACTGA+CGG | + | chr7.2:92273745-92273764 | MS.gene97861:intron | 20.0% |
| ! | AAAATAAAGTCAAATTGCGT+AGG | + | chr7.2:92274428-92274447 | MS.gene97861:intron | 25.0% |
| ! | AAATAGAACATTAAACTCAC+GGG | - | chr7.2:92275965-92275984 | None:intergenic | 25.0% |
| ! | AATTAATTTCTATCCACTGA+CGG | + | chr7.2:92274031-92274050 | MS.gene97861:intron | 25.0% |
| ! | ACAGTCATTGGATATTTAAT+TGG | - | chr7.2:92273795-92273814 | None:intergenic | 25.0% |
| ! | AGGCTTAACATTAAAGTTAA+AGG | - | chr7.2:92274600-92274619 | None:intergenic | 25.0% |
| ! | ATAACATAAATTATTACCGC+TGG | - | chr7.2:92275174-92275193 | None:intergenic | 25.0% |
| ! | ATGATCTTTATGAGAAACAA+GGG | + | chr7.2:92275061-92275080 | MS.gene97861:CDS | 25.0% |
| ! | ATTCATTATAAACTTGAGGT+TGG | - | chr7.2:92274910-92274929 | None:intergenic | 25.0% |
| ! | CAATTATTGTATACAGTCAT+TGG | - | chr7.2:92273807-92273826 | None:intergenic | 25.0% |
| ! | GAATCTTAATATACACATTG+GGG | - | chr7.2:92276237-92276256 | None:intergenic | 25.0% |
| ! | GGAATCTTAATATACACATT+GGG | - | chr7.2:92276238-92276257 | None:intergenic | 25.0% |
| ! | GGCTTAACATTAAAGTTAAA+GGG | - | chr7.2:92274599-92274618 | None:intergenic | 25.0% |
| ! | GTAATAATGAAAGACTTGTA+TGG | + | chr7.2:92275220-92275239 | MS.gene97861:intron | 25.0% |
| ! | TAAAATTACATGATCATGCA+GGG | + | chr7.2:92276003-92276022 | MS.gene97861:intron | 25.0% |
| ! | TAACATAAATTATTACCGCT+GGG | - | chr7.2:92275173-92275192 | None:intergenic | 25.0% |
| ! | TAAGAACTAACATGTAAAAG+TGG | + | chr7.2:92273900-92273919 | MS.gene97861:intron | 25.0% |
| ! | TCAAATATACACCAAGTATA+TGG | - | chr7.2:92274789-92274808 | None:intergenic | 25.0% |
| ! | TCAATTTATGATCAAACTGA+TGG | + | chr7.2:92276112-92276131 | MS.gene97861:CDS | 25.0% |
| ! | TGGAATCTTAATATACACAT+TGG | - | chr7.2:92276239-92276258 | None:intergenic | 25.0% |
| ! | TGGTATTAGTATATGATTGA+TGG | - | chr7.2:92275483-92275502 | None:intergenic | 25.0% |
| !!! | ACAACTTAATTTGTAGCTTA+CGG | + | chr7.2:92274351-92274370 | MS.gene97861:intron | 25.0% |
| !!! | CATGAAGTTTGTTTTTTCAT+TGG | + | chr7.2:92274314-92274333 | MS.gene97861:intron | 25.0% |
| !!! | TACTTGGTGTATATTTGAAT+TGG | + | chr7.2:92274791-92274810 | MS.gene97861:intron | 25.0% |
| !!! | TTACAACTCTTAAAAGTGTT+TGG | - | chr7.2:92275337-92275356 | None:intergenic | 25.0% |
| AAAAATATTTACACCGTCAG+TGG | - | chr7.2:92274047-92274066 | None:intergenic | 30.0% | |
| AACACGCAACATTATACTTA+AGG | - | chr7.2:92275918-92275937 | None:intergenic | 30.0% | |
| ACAGTATAACACCATGATTT+CGG | - | chr7.2:92274744-92274763 | None:intergenic | 30.0% | |
| ACTCTCTACAATCATCTATT+TGG | - | chr7.2:92274097-92274116 | None:intergenic | 30.0% | |
| ATATACACCAAGTATATGGT+TGG | - | chr7.2:92274785-92274804 | None:intergenic | 30.0% | |
| ATTAAAGTTAAAGGGCTGTT+TGG | - | chr7.2:92274591-92274610 | None:intergenic | 30.0% | |
| ATTTATGATCAAACTGATGG+AGG | + | chr7.2:92276115-92276134 | MS.gene97861:CDS | 30.0% | |
| CATGATCTTTATGAGAAACA+AGG | + | chr7.2:92275060-92275079 | MS.gene97861:CDS | 30.0% | |
| CCTAATCGACATTTATATTG+AGG | + | chr7.2:92274949-92274968 | MS.gene97861:intron | 30.0% | |
| CGATAACTTCCTTAATTGAA+GGG | - | chr7.2:92276279-92276298 | None:intergenic | 30.0% | |
| CTAAAATTACATGATCATGC+AGG | + | chr7.2:92276002-92276021 | MS.gene97861:intron | 30.0% | |
| CTGTCAGAATAATACTTAGT+GGG | + | chr7.2:92274618-92274637 | MS.gene97861:intron | 30.0% | |
| GCATTATGGAATGATTTGAT+TGG | + | chr7.2:92274143-92274162 | MS.gene97861:intron | 30.0% | |
| TAGGCTTATTTACTGACAAA+AGG | - | chr7.2:92274567-92274586 | None:intergenic | 30.0% | |
| TGTTGTCAAATTGTAGATGT+AGG | - | chr7.2:92275748-92275767 | None:intergenic | 30.0% | |
| TTGGTGTATATTTGAATTGG+TGG | + | chr7.2:92274794-92274813 | MS.gene97861:intron | 30.0% | |
| ! | CCTCAATATAAATGTCGATT+AGG | - | chr7.2:92274952-92274971 | None:intergenic | 30.0% |
| ! | CGAAGATATTTTTCTATCCT+AGG | + | chr7.2:92275268-92275287 | MS.gene97861:intron | 30.0% |
| ! | TGTTGCTATTGTCAAAATCA+TGG | + | chr7.2:92274866-92274885 | MS.gene97861:intron | 30.0% |
| !!! | GTTTTTTCATTGGTTCTGTT+TGG | + | chr7.2:92274324-92274343 | MS.gene97861:intron | 30.0% |
| !!! | TCTATTTTTAATTCGTGGTG+TGG | + | chr7.2:92275978-92275997 | MS.gene97861:intron | 30.0% |
| !!! | TTCATGCTTATTTTTGCATG+CGG | + | chr7.2:92273609-92273628 | MS.gene97861:intron | 30.0% |
| ACCTCAAAGACGTTACAAAA+CGG | - | chr7.2:92273559-92273578 | None:intergenic | 35.0% | |
| ATATCTTCGCACAAGTAGAA+CGG | - | chr7.2:92275257-92275276 | None:intergenic | 35.0% | |
| ATTAAGGAAGTTATCGCCAA+TGG | + | chr7.2:92276283-92276302 | MS.gene97861:CDS | 35.0% | |
| ATTAGAAGTAGAGTAAACCG+TGG | + | chr7.2:92275536-92275555 | MS.gene97861:intron | 35.0% | |
| ATTAGATGCTCACAAACAGA+TGG | + | chr7.2:92275006-92275025 | MS.gene97861:CDS | 35.0% | |
| CCACTAAGTATTATTCTGAC+AGG | - | chr7.2:92274620-92274639 | None:intergenic | 35.0% | |
| CCTGTCAGAATAATACTTAG+TGG | + | chr7.2:92274617-92274636 | MS.gene97861:intron | 35.0% | |
| CTAACACCACTTTCAATAAG+AGG | - | chr7.2:92275135-92275154 | None:intergenic | 35.0% | |
| CTGATTCCTCTTATTGAAAG+TGG | + | chr7.2:92275126-92275145 | MS.gene97861:CDS | 35.0% | |
| GAGTAATACAACGATTATGC+AGG | - | chr7.2:92275602-92275621 | None:intergenic | 35.0% | |
| GCGATAACTTCCTTAATTGA+AGG | - | chr7.2:92276280-92276299 | None:intergenic | 35.0% | |
| GTCGATTAGGAAACAAAACA+AGG | - | chr7.2:92274939-92274958 | None:intergenic | 35.0% | |
| GTGCTTACAATGATCAATTC+AGG | + | chr7.2:92275455-92275474 | MS.gene97861:CDS | 35.0% | |
| TAGCTTGGTAAACTACACAA+AGG | + | chr7.2:92275659-92275678 | MS.gene97861:intron | 35.0% | |
| TCAGAATAATACTTAGTGGG+CGG | + | chr7.2:92274621-92274640 | MS.gene97861:intron | 35.0% | |
| TGCAAAATGGCTTCATAAAG+TGG | + | chr7.2:92276204-92276223 | MS.gene97861:CDS | 35.0% | |
| TGGTGAGTTATGCAAAATCA+CGG | + | chr7.2:92274814-92274833 | MS.gene97861:intron | 35.0% | |
| TTCTTAAAGAAGAAGCAGAG+AGG | - | chr7.2:92273523-92273542 | None:intergenic | 35.0% | |
| ! | CTTATTGAAAGTGGTGTTAG+AGG | + | chr7.2:92275135-92275154 | MS.gene97861:CDS | 35.0% |
| ! | GTTGTAAGGATGTGTTTTGT+TGG | + | chr7.2:92273722-92273741 | MS.gene97861:intron | 35.0% |
| ! | TTTCTGTTGAAGTATCTCCT+AGG | + | chr7.2:92276149-92276168 | MS.gene97861:CDS | 35.0% |
| !! | GCTGTTTTCATAAGCTAAGT+TGG | + | chr7.2:92274456-92274475 | MS.gene97861:intron | 35.0% |
| !!! | CGATGTGTTTTGTTGTTGTA+AGG | + | chr7.2:92273708-92273727 | MS.gene97861:intron | 35.0% |
| AAGACATTGACAGTGCATAC+TGG | + | chr7.2:92276044-92276063 | MS.gene97861:CDS | 40.0% | |
| AAGAGGAATCAGATCCGTAA+CGG | - | chr7.2:92275118-92275137 | None:intergenic | 40.0% | |
| AAGGTCAATGTTGTCAATCC+CGG | + | chr7.2:92275678-92275697 | MS.gene97861:intron | 40.0% | |
| AATCGCAATTCTCTGTGATC+CGG | - | chr7.2:92275700-92275719 | None:intergenic | 40.0% | |
| ACGGAGTTTGACAAAGTTAC+AGG | + | chr7.2:92274673-92274692 | MS.gene97861:intron | 40.0% | |
| AGACATTGACAGTGCATACT+GGG | + | chr7.2:92276045-92276064 | MS.gene97861:CDS | 40.0% | |
| AGTTAAAGGGCTGTTTGGAT+AGG | - | chr7.2:92274586-92274605 | None:intergenic | 40.0% | |
| ATACTGGGAACTTGTAGTGA+AGG | + | chr7.2:92276060-92276079 | MS.gene97861:CDS | 40.0% | |
| CACCAAGTATATGGTTGGAT+TGG | - | chr7.2:92274780-92274799 | None:intergenic | 40.0% | |
| CACCAATCCAACCATATACT+TGG | + | chr7.2:92274775-92274794 | MS.gene97861:intron | 40.0% | |
| CACGTTCACACTTATTCCAT+TGG | - | chr7.2:92276302-92276321 | None:intergenic | 40.0% | |
| CGGAGTTTGACAAAGTTACA+GGG | + | chr7.2:92274674-92274693 | MS.gene97861:intron | 40.0% | |
| CTGAAAGATCTGCAATCATG+TGG | - | chr7.2:92275416-92275435 | None:intergenic | 40.0% | |
| CTGCAATCATGTGGTATAGA+CGG | - | chr7.2:92275407-92275426 | None:intergenic | 40.0% | |
| GAACCATAGAAGCTGCAAAA+TGG | + | chr7.2:92276191-92276210 | MS.gene97861:CDS | 40.0% | |
| GCAAACATTTGACTGTTGGT+TGG | + | chr7.2:92274971-92274990 | MS.gene97861:intron | 40.0% | |
| GCTAATACAAACCGACTGTA+AGG | - | chr7.2:92274653-92274672 | None:intergenic | 40.0% | |
| GGAGTTTGACAAAGTTACAG+GGG | + | chr7.2:92274675-92274694 | MS.gene97861:intron | 40.0% | |
| GTGTACTAAATCGTGTATCG+CGG | + | chr7.2:92275770-92275789 | MS.gene97861:intron | 40.0% | |
| TCTCCAAACTCTCTATGCTA+TGG | + | chr7.2:92275806-92275825 | MS.gene97861:intron | 40.0% | |
| TGAGGCAAACATTTGACTGT+TGG | + | chr7.2:92274967-92274986 | MS.gene97861:intron | 40.0% | |
| TGAGTTATGCAAAATCACGG+TGG | + | chr7.2:92274817-92274836 | MS.gene97861:intron | 40.0% | |
| TGCATGTGTCCCTTCAATTA+AGG | + | chr7.2:92276267-92276286 | MS.gene97861:CDS | 40.0% | |
| TGCTCACAAACAGATGGAAA+TGG | + | chr7.2:92275012-92275031 | MS.gene97861:CDS | 40.0% | |
| TTTCGGCAAAAGCTGCAATT+TGG | - | chr7.2:92274727-92274746 | None:intergenic | 40.0% | |
| TTTGTAGCTTACGGCATAAG+TGG | + | chr7.2:92274360-92274379 | MS.gene97861:intron | 40.0% | |
| ! | ACCGTTTTGTAACGTCTTTG+AGG | + | chr7.2:92273555-92273574 | MS.gene97861:CDS | 40.0% |
| ! | AGGTAAGAAGCTCGTTTTGA+TGG | - | chr7.2:92273471-92273490 | None:intergenic | 40.0% |
| ! | CAAGTATATGGTTGGATTGG+TGG | - | chr7.2:92274777-92274796 | None:intergenic | 40.0% |
| !! | AAGCCATTTTGCAGCTTCTA+TGG | - | chr7.2:92276197-92276216 | None:intergenic | 40.0% |
| !! | ACAGTCGGTTTGTATTAGCA+CGG | + | chr7.2:92274654-92274673 | MS.gene97861:intron | 40.0% |
| ACTTGAGGTTGGCAGAATCA+TGG | - | chr7.2:92274899-92274918 | None:intergenic | 45.0% | |
| AGAAGTAGAGTAAACCGTGG+AGG | + | chr7.2:92275539-92275558 | MS.gene97861:intron | 45.0% | |
| AGAGGAATCAGATCCGTAAC+GGG | - | chr7.2:92275117-92275136 | None:intergenic | 45.0% | |
| ATCGCAATTCTCTGTGATCC+GGG | - | chr7.2:92275699-92275718 | None:intergenic | 45.0% | |
| CGGCAGAGATTATCATACCA+TGG | - | chr7.2:92275093-92275112 | None:intergenic | 45.0% | |
| GAAATGGAGTTCCTGCAAAG+AGG | + | chr7.2:92275028-92275047 | MS.gene97861:CDS | 45.0% | |
| GAGATTCTGGTAAAGAAGCG+CGG | - | chr7.2:92273436-92273455 | None:intergenic | 45.0% | |
| GATCAAACTGATGGAGGTGA+TGG | + | chr7.2:92276121-92276140 | MS.gene97861:CDS | 45.0% | |
| GATCTGGATCGAAGAGATTC+TGG | - | chr7.2:92273449-92273468 | None:intergenic | 45.0% | |
| TGTGAGCATCTAATCCTGCA+AGG | - | chr7.2:92275000-92275019 | None:intergenic | 45.0% | |
| ! | AAAGAAGCGCGGTTTGTGTT+TGG | - | chr7.2:92273425-92273444 | None:intergenic | 45.0% |
| ! | TGCAGCTTTTGCCGAAATCA+TGG | + | chr7.2:92274730-92274749 | MS.gene97861:intron | 45.0% |
| !! | GAAGCTCGTTTTGATGGATC+TGG | - | chr7.2:92273465-92273484 | None:intergenic | 45.0% |
| AGAAACAAGGGCAGAGTCCA+TGG | + | chr7.2:92275073-92275092 | MS.gene97861:CDS | 50.0% | |
| GAGACATGTCTATGCCTCCA+CGG | - | chr7.2:92275556-92275575 | None:intergenic | 50.0% | |
| GCGCCATAGCATAGAGAGTT+TGG | - | chr7.2:92275812-92275831 | None:intergenic | 50.0% | |
| GGCGGTATTTGCCTTACAGT+CGG | + | chr7.2:92274639-92274658 | MS.gene97861:intron | 50.0% | |
| TAATCTCTGCCGACCCGTTA+CGG | + | chr7.2:92275101-92275120 | MS.gene97861:CDS | 50.0% | |
| TCAGTATCCTCAGCAAGCCT+AGG | - | chr7.2:92276169-92276188 | None:intergenic | 50.0% | |
| TGAAGAACCGTCCTCTTTGC+AGG | - | chr7.2:92275042-92275061 | None:intergenic | 50.0% | |
| TGGAGTTCCTGCAAAGAGGA+CGG | + | chr7.2:92275032-92275051 | MS.gene97861:CDS | 50.0% | |
| TGGCGCGATAGAGATGCTAT+TGG | + | chr7.2:92275826-92275845 | MS.gene97861:intron | 50.0% | |
| !! | AGGCTTGCTGAGGATACTGA+AGG | + | chr7.2:92276169-92276188 | MS.gene97861:CDS | 50.0% |
| !! | AGTATCTCCTAGGCTTGCTG+AGG | + | chr7.2:92276159-92276178 | MS.gene97861:CDS | 50.0% |
| !! | GAATCAGATCCGTAACGGGT+CGG | - | chr7.2:92275113-92275132 | None:intergenic | 50.0% |
| GCAGGGAACTTGTGCAAGCA+GGG | + | chr7.2:92276020-92276039 | MS.gene97861:intron | 55.0% | |
| TGCAGGGAACTTGTGCAAGC+AGG | + | chr7.2:92276019-92276038 | MS.gene97861:intron | 55.0% | |
| ! | CTGTTGGTTGGTGTCCTTGC+AGG | + | chr7.2:92274983-92275002 | MS.gene97861:intron | 55.0% |
| AGGCGTCACTAGCAACCCAG+CGG | + | chr7.2:92275155-92275174 | MS.gene97861:CDS | 60.0% | |
| GGGACACATGCAGCTGTAGC+TGG | - | chr7.2:92276259-92276278 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 92273386 | 92276336 | 92273386 | ID=MS.gene97861 |
| chr7.2 | mRNA | 92273386 | 92276336 | 92273386 | ID=MS.gene97861.t1;Parent=MS.gene97861 |
| chr7.2 | exon | 92273386 | 92273576 | 92273386 | ID=MS.gene97861.t1.exon1;Parent=MS.gene97861.t1 |
| chr7.2 | CDS | 92273386 | 92273576 | 92273386 | ID=cds.MS.gene97861.t1;Parent=MS.gene97861.t1 |
| chr7.2 | exon | 92275005 | 92275176 | 92275005 | ID=MS.gene97861.t1.exon2;Parent=MS.gene97861.t1 |
| chr7.2 | CDS | 92275005 | 92275176 | 92275005 | ID=cds.MS.gene97861.t1;Parent=MS.gene97861.t1 |
| chr7.2 | exon | 92275427 | 92275476 | 92275427 | ID=MS.gene97861.t1.exon3;Parent=MS.gene97861.t1 |
| chr7.2 | CDS | 92275427 | 92275476 | 92275427 | ID=cds.MS.gene97861.t1;Parent=MS.gene97861.t1 |
| chr7.2 | exon | 92276024 | 92276336 | 92276024 | ID=MS.gene97861.t1.exon4;Parent=MS.gene97861.t1 |
| chr7.2 | CDS | 92276024 | 92276336 | 92276024 | ID=cds.MS.gene97861.t1;Parent=MS.gene97861.t1 |
| Gene Sequence |
| Protein sequence |
