AlfalfaGEDB | MsG0080048298.01

M. sativa cultivar ZhongmuNo.1 / MsG0080048298.01

KEGG: -
GO: GO:0003677 GO:0003899 GO:0006351
PFAM: PF04563 PF04565 PF04566

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048298.01.T01	XP_039684701.1	86.912	489	20	2	1	445	127	615	0	861

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048298.01.T01	Q9LK40	57.172	495	161	5	1	445	114	607	0	566

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048298.01.T01	A0A396GML5	86.912	489	20	2	1	445	127	615	0.0	861

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048298.01	MsG0180000142.01	0.800532	1.378733e-48	6.435067e-46
MsG0080048298.01	MsG0180000155.01	0.821607	3.690814e-53	3.016817e-50
MsG0080048298.01	MsG0180003786.01	0.832812	7.633255e-56	8.627202e-53
MsG0080048298.01	MsG0180003943.01	0.808416	3.130130e-50	1.788738e-47
MsG0080048298.01	MsG0180004049.01	0.810951	8.928913e-51	5.457010e-48
MsG0080048298.01	MsG0180004099.01	0.815509	8.915503e-52	6.159032e-49
MsG0080048298.01	MsG0180004249.01	0.825670	4.129118e-54	3.788718e-51
MsG0080048298.01	MsG0180004711.01	0.804765	1.846503e-49	9.601563e-47
MsG0080048298.01	MsG0180005400.01	0.805439	1.334345e-49	7.059520e-47
MsG0080048298.01	MsG0180005575.01	0.804131	2.503259e-49	1.280528e-46
MsG0080048298.01	MsG0180005919.01	0.806884	6.622547e-50	3.635985e-47
MsG0080048298.01	MsG0180006000.01	0.858135	1.014018e-62	2.561743e-59
MsG0080048298.01	MsG0280006311.01	0.811637	6.337455e-51	3.943291e-48
MsG0080048298.01	MsG0280009794.01	0.800266	1.562415e-48	7.243447e-46
MsG0080048298.01	MsG0280010015.01	0.816564	5.182724e-52	3.684993e-49
MsG0080048298.01	MsG0280010287.01	0.814329	1.628771e-51	1.089677e-48
MsG0080048298.01	MsG0280010533.01	0.804144	2.486687e-49	1.272513e-46
MsG0080048298.01	MsG0280011282.01	0.801670	8.068309e-49	3.875755e-46
MsG0080048298.01	MsG0280011340.01	0.814445	1.535388e-51	1.030426e-48
MsG0080048298.01	MsG0280011341.01	0.806879	6.638702e-50	3.644330e-47
MsG0080048298.01	MsG0380013476.01	0.810560	1.084670e-50	6.559543e-48
MsG0080048298.01	MsG0380014676.01	0.809076	2.261989e-50	1.315325e-47
MsG0080048298.01	MsG0380015332.01	0.834651	2.649948e-56	3.164687e-53
MsG0080048298.01	MsG0380016140.01	0.803442	3.479260e-49	1.748574e-46
MsG0080048298.01	MsG0380016247.01	0.835578	1.547074e-56	1.899671e-53
MsG0080048298.01	MsG0380016517.01	0.824504	7.786857e-54	6.910352e-51
MsG0080048298.01	MsG0380016703.01	0.807078	6.024931e-50	3.324408e-47
MsG0080048298.01	MsG0380016920.01	0.848635	5.405023e-60	9.981754e-57
MsG0080048298.01	MsG0380017061.01	0.818803	1.619777e-52	1.224687e-49
MsG0080048298.01	MsG0380017697.01	0.801915	7.186529e-49	3.473760e-46
MsG0080048298.01	MsG0480019710.01	0.807009	6.231984e-50	3.432590e-47
MsG0080048298.01	MsG0480019922.01	0.817318	3.508639e-52	2.546735e-49
MsG0080048298.01	MsG0480020402.01	0.801996	6.917338e-49	3.350456e-46
MsG0080048298.01	MsG0480020495.01	0.818445	1.953305e-52	1.462577e-49
MsG0080048298.01	MsG0480020699.01	0.838951	2.118861e-57	2.882657e-54
MsG0080048298.01	MsG0480020739.01	0.811712	6.105090e-51	3.806317e-48
MsG0080048298.01	MsG0480020847.01	0.822398	2.419496e-53	2.022994e-50
MsG0080048298.01	MsG0480020909.01	0.822577	2.199494e-53	1.848469e-50
MsG0080048298.01	MsG0480021501.01	0.804780	1.832895e-49	9.534594e-47
MsG0080048298.01	MsG0480022045.01	0.800204	1.608648e-48	7.445684e-46
MsG0080048298.01	MsG0480022796.01	0.836681	8.116353e-57	1.030300e-53
MsG0080048298.01	MsG0480023202.01	0.842495	2.496929e-58	3.792838e-55
MsG0080048298.01	MsG0480023354.01	0.804647	1.953564e-49	1.012729e-46
MsG0080048298.01	MsG0480023463.01	0.826187	3.112324e-54	2.898070e-51
MsG0080048298.01	MsG0580024038.01	0.813204	2.881015e-51	1.869390e-48
MsG0080048298.01	MsG0580024462.01	0.841495	4.589694e-58	6.756196e-55
MsG0080048298.01	MsG0580024961.01	0.822890	1.858902e-53	1.576041e-50
MsG0080048298.01	MsG0580028775.01	0.802382	5.760733e-49	2.818041e-46
MsG0080048298.01	MsG0680030949.01	0.808963	2.391432e-50	1.386349e-47
MsG0080048298.01	MsG0680031506.01	0.800054	1.724994e-48	7.954220e-46
MsG0080048298.01	MsG0680032935.01	0.839476	1.548769e-57	2.141360e-54
MsG0080048298.01	MsG0680034853.01	0.850626	1.503177e-60	2.962693e-57
MsG0080048298.01	MsG0680035475.01	0.804041	2.613135e-49	1.333696e-46
MsG0080048298.01	MsG0780036752.01	0.808614	2.839944e-50	1.631211e-47
MsG0080048298.01	MsG0780036815.01	0.805571	1.252019e-49	6.646350e-47
MsG0080048298.01	MsG0780036816.01	0.810611	1.057767e-50	6.405498e-48
MsG0080048298.01	MsG0780036836.01	0.814505	1.488787e-51	1.000842e-48
MsG0080048298.01	MsG0780038602.01	0.800961	1.127333e-48	5.319581e-46
MsG0080048298.01	MsG0780038603.01	0.844577	6.937086e-59	1.124906e-55
MsG0080048298.01	MsG0780039527.01	0.804248	2.366667e-49	1.214241e-46
MsG0080048298.01	MsG0780039655.01	0.818367	2.034207e-52	1.519795e-49
MsG0080048298.01	MsG0780039866.01	0.846206	2.512835e-59	4.292294e-56
MsG0080048298.01	MsG0780040057.01	0.814892	1.222096e-51	8.300854e-49
MsG0080048298.01	MsG0780040529.01	0.816130	6.479371e-52	4.552671e-49
MsG0080048298.01	MsG0780041579.01	0.807874	4.084802e-50	2.301006e-47
MsG0080048298.01	MsG0880042380.01	0.843343	1.485889e-58	2.318103e-55
MsG0080048298.01	MsG0880042773.01	0.800191	1.618451e-48	7.488634e-46
MsG0080048298.01	MsG0880043614.01	0.815016	1.147353e-51	7.819656e-49
MsG0080048298.01	MsG0880044782.01	0.815685	8.147009e-52	5.655211e-49
MsG0080048298.01	MsG0880045294.01	0.810738	9.927639e-51	6.032543e-48
MsG0080048298.01	MsG0880045372.01	0.814503	1.490701e-51	1.002069e-48
MsG0080048298.01	MsG0880046649.01	0.806275	8.904762e-50	4.813381e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048298.01.T01	MTR_3g105990	84.254	489	33	2	1	445	129	617	0.0	837
MsG0080048298.01.T01	MTR_0189s0050	83.887	391	19	2	1	347	127	517	0.0	651
MsG0080048298.01.T01	MTR_1g023500	27.308	509	290	14	3	445	113	607	2.10e-46	172
MsG0080048298.01.T01	MTR_8g023445	26.000	500	275	14	5	437	959	1430	5.47e-30	124

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048298.01.T01	AT3G23780	57.172	495	161	5	1	445	114	607	0.0	566
MsG0080048298.01.T01	AT3G23780	57.172	495	161	5	1	445	114	607	0.0	566
MsG0080048298.01.T01	AT3G18090	56.701	485	159	5	8	442	3	486	0.0	553
MsG0080048298.01.T01	AT3G18090	56.701	485	159	5	8	442	3	486	0.0	553
MsG0080048298.01.T01	AT3G18090	56.701	485	159	5	8	442	3	486	0.0	553
MsG0080048298.01.T01	AT4G21710	27.586	493	277	14	3	429	110	588	2.69e-44	166
MsG0080048298.01.T01	AT5G45140	27.559	508	265	17	5	441	104	579	3.09e-35	139
MsG0080048298.01.T01	AT5G45140	27.559	508	265	17	5	441	104	579	4.05e-35	139
MsG0080048298.01.T01	AT5G45140	27.559	508	265	17	5	441	104	579	4.05e-35	139

Find 116 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATAGGATGGTTGTTAAAT+TGG	0.209238	contig268end:-8114	MsG0080048298.01.T01:CDS
AAAGACAAAGTCTTCCTAAA+TGG	0.218088	contig268end:-6530	MsG0080048298.01.T01:CDS
ATTGAGGATCTCATTGATTA+TGG	0.243936	contig268end:-7972	MsG0080048298.01.T01:CDS
GAAAGTTGATGTTCAACTTC+AGG	0.293979	contig268end:-9507	MsG0080048298.01.T01:intron
TTGGAGACCGTTTGTAATAA+TGG	0.302968	contig268end:+7561	MsG0080048298.01.T01:intergenic
GTTGAACATCAACTTTCATT+TGG	0.303801	contig268end:+9513	MsG0080048298.01.T01:intergenic
TTCTTAGAGGAACGTGTAAA+AGG	0.305968	contig268end:-7852	MsG0080048298.01.T01:CDS
CTCCAGTAGAAAACGCTCTT+TGG	0.308318	contig268end:+7542	MsG0080048298.01.T01:intergenic
GCTCTGCAGAGAGACCTTTA+TGG	0.316497	contig268end:-7625	MsG0080048298.01.T01:CDS
AGTCACAAATGAAAAGAAAT+AGG	0.317073	contig268end:-8130	MsG0080048298.01.T01:CDS
TGATGATACTATGACCGTTC+TGG	0.319004	contig268end:-6558	MsG0080048298.01.T01:CDS
TGGTCAAGTCTGATCTTTGC+TGG	0.326694	contig268end:-8868	MsG0080048298.01.T01:CDS
TGAGTTGGCTGGTGAGCTGC+TGG	0.335127	contig268end:-7698	MsG0080048298.01.T01:CDS
AGATCAGACTTGACCATAAC+AGG	0.353811	contig268end:+8875	MsG0080048298.01.T01:intergenic
CTCCAACCCAGTCCCCATTT+AGG	0.359540	contig268end:+6516	MsG0080048298.01.T01:intergenic
TCTGGTGTGGTTGCAACTCT+TGG	0.363686	contig268end:-7484	MsG0080048298.01.T01:CDS
TTCCTCAGCTGTTTGATTGT+GGG	0.376159	contig268end:-6595	MsG0080048298.01.T01:CDS
GGTTTCAAATACTCCGTATT+GGG	0.379946	contig268end:-8165	MsG0080048298.01.T01:CDS
AAATATTTCTGAAGAGGCTC+TGG	0.386743	contig268end:-8187	MsG0080048298.01.T01:CDS
AAGACAAAGTCTTCCTAAAT+GGG	0.391964	contig268end:-6529	MsG0080048298.01.T01:CDS
TTGAACATCAACTTTCATTT+GGG	0.399278	contig268end:+9514	MsG0080048298.01.T01:intergenic
TTATCACTCCGAACCTTCTT+CGG	0.400038	contig268end:+8977	MsG0080048298.01.T01:intergenic
AAAAGGATGGAAAGGATATC+TGG	0.404544	contig268end:-7502	MsG0080048298.01.T01:CDS
GATGATACTATGACCGTTCT+GGG	0.412400	contig268end:-6557	MsG0080048298.01.T01:CDS
CGGAGTGATAAGTTTAAGAC+TGG	0.412464	contig268end:-8965	MsG0080048298.01.T01:CDS
CTTCCTCAGCTGTTTGATTG+TGG	0.425534	contig268end:-6596	MsG0080048298.01.T01:CDS
GTTGCAGGCATCCTTCTCAC+TGG	0.426530	contig268end:-6721	MsG0080048298.01.T01:intron
TTTCACCATCTGGGGTAGAA+AGG	0.429958	contig268end:+6684	MsG0080048298.01.T01:intergenic
GCATCCTTCTCACTGGGGTA+AGG	0.434903	contig268end:-6714	MsG0080048298.01.T01:CDS
GGGTTTCAAATACTCCGTAT+TGG	0.435691	contig268end:-8166	MsG0080048298.01.T01:CDS
AATTCAGCCATGGTTTGTAA+TGG	0.438058	contig268end:+7451	MsG0080048298.01.T01:intergenic
TATTGGTAGACTGCCTGTTA+TGG	0.440804	contig268end:-8888	MsG0080048298.01.T01:CDS
GAACATCTCGATCTCCATAA+AGG	0.443290	contig268end:+7611	MsG0080048298.01.T01:intergenic
TCAGGTATATGTTCCGAAGA+AGG	0.446001	contig268end:-8990	MsG0080048298.01.T01:intron
CCTTCTCAGCACCCTTGATC+AGG	0.446573	contig268end:+8795	MsG0080048298.01.T01:intergenic
AGCCATGGTTTGTAATGGAT+TGG	0.460916	contig268end:+7456	MsG0080048298.01.T01:intergenic
TAAACGTGAAGCATTTCATC+GGG	0.461515	contig268end:-7892	MsG0080048298.01.T01:CDS
TTCAGTACACAGGAAAGGTC+GGG	0.465796	contig268end:-7408	MsG0080048298.01.T01:CDS
CACGTTTATCGTCTGCCTCA+CGG	0.469170	contig268end:+7907	MsG0080048298.01.T01:intergenic
GAGAAATGAGTTGCCTCATC+AGG	0.476514	contig268end:-6444	MsG0080048298.01.T01:CDS
AGATGAAGTGGGATGTGACA+AGG	0.479432	contig268end:-8919	MsG0080048298.01.T01:CDS
TGGAGGCTACTTCCTGATCA+AGG	0.479532	contig268end:-8807	MsG0080048298.01.T01:CDS
AAGTCTTCCTAAATGGGGAC+TGG	0.487711	contig268end:-6523	MsG0080048298.01.T01:CDS
GTGACAAGGGAAATAACTAT+TGG	0.489012	contig268end:-8905	MsG0080048298.01.T01:CDS
TGTTTCCTTTCTACCCCAGA+TGG	0.490279	contig268end:-6689	MsG0080048298.01.T01:CDS
TGGATGAGTGAAGCTGAAAA+AGG	0.492402	contig268end:-8848	MsG0080048298.01.T01:CDS
TGTTCTTCTTAATTCAGCCA+TGG	0.493474	contig268end:+7441	MsG0080048298.01.T01:intergenic
CTGGTGTGGTTGCAACTCTT+GGG	0.494422	contig268end:-7483	MsG0080048298.01.T01:CDS
TAGGATGGTTGTTAAATTGG+TGG	0.495089	contig268end:-8111	MsG0080048298.01.T01:CDS
GACGCTTCCATTATTACAAA+CGG	0.495494	contig268end:-7568	MsG0080048298.01.T01:CDS
TTGCAGGCATCCTTCTCACT+GGG	0.496735	contig268end:-6720	MsG0080048298.01.T01:intron
TCGAAATAAGAGGCTTGAGT+TGG	0.497335	contig268end:-7713	MsG0080048298.01.T01:CDS
GCACATGCTCGGAAGCGAAT+GGG	0.505224	contig268end:-7652	MsG0080048298.01.T01:CDS
AATAAGAGGCTTGAGTTGGC+TGG	0.507515	contig268end:-7709	MsG0080048298.01.T01:CDS
CCTGATCAAGGGTGCTGAGA+AGG	0.511307	contig268end:-8795	MsG0080048298.01.T01:intron
TATATGTTCCGAAGAAGGTT+CGG	0.514071	contig268end:-8985	MsG0080048298.01.T01:CDS
CATGGACACATCCTTTCAAA+AGG	0.518074	contig268end:-7519	MsG0080048298.01.T01:CDS
GACACATCCTTTCAAAAGGA+TGG	0.521759	contig268end:-7515	MsG0080048298.01.T01:CDS
AAGTGCACTTTGCACATGCT+CGG	0.525576	contig268end:-7663	MsG0080048298.01.T01:CDS
ATCAAACAGCTGAGGAAGTA+CGG	0.526202	contig268end:+6601	MsG0080048298.01.T01:intergenic
CTCTGCAACCTAGCATGTCT+CGG	0.528109	contig268end:+9551	MsG0080048298.01.T01:intergenic
CACTTCAGATAAAGAGATTG+AGG	0.530958	contig268end:-7988	MsG0080048298.01.T01:CDS
TGCACATGCTCGGAAGCGAA+TGG	0.531358	contig268end:-7653	MsG0080048298.01.T01:CDS
TGTCCGTTGAGATACCTGTA+TGG	0.532316	contig268end:-8034	MsG0080048298.01.T01:CDS
ATCCTTTCAAAAGGATGGAA+AGG	0.537841	contig268end:-7510	MsG0080048298.01.T01:CDS
GAACCTTCACCATGTAAGCT+AGG	0.542144	contig268end:+7739	MsG0080048298.01.T01:intergenic
GGCTAGGTACCTAGCTTACA+TGG	0.542880	contig268end:-7748	MsG0080048298.01.T01:intron
AATATTTCTGAAGAGGCTCT+GGG	0.543789	contig268end:-8186	MsG0080048298.01.T01:CDS
GATTAAAAGCGAACCTGATG+AGG	0.544004	contig268end:+6431	MsG0080048298.01.T01:intergenic
AAGAGCAAATATTTCTGAAG+AGG	0.547745	contig268end:-8193	MsG0080048298.01.T01:CDS
TGCTCGGAAGCGAATGGGAA+AGG	0.548332	contig268end:-7647	MsG0080048298.01.T01:CDS
ATGGTTGTTAAATTGGTGGA+AGG	0.549390	contig268end:-8107	MsG0080048298.01.T01:CDS
TCCACGGAGGGAATTACAAA+CGG	0.555312	contig268end:-8083	MsG0080048298.01.T01:CDS
TTGAAAGCAACAGCCCAATA+CGG	0.558981	contig268end:+8152	MsG0080048298.01.T01:intergenic
TTTATCGTCTGCCTCACGGA+TGG	0.562731	contig268end:+7911	MsG0080048298.01.T01:intergenic
TTCCTAAATGGGGACTGGGT+TGG	0.562779	contig268end:-6518	MsG0080048298.01.T01:CDS
ATATTGATAGAGAGATGAAG+TGG	0.565615	contig268end:-8931	MsG0080048298.01.T01:CDS
AGTCTTCCTAAATGGGGACT+GGG	0.566659	contig268end:-6522	MsG0080048298.01.T01:CDS
GTTCAGTACACAGGAAAGGT+CGG	0.569216	contig268end:-7409	MsG0080048298.01.T01:CDS
TTGGTGGAAGGTTCCACGGA+GGG	0.572533	contig268end:-8095	MsG0080048298.01.T01:CDS
GATGAAGTGGGATGTGACAA+GGG	0.572872	contig268end:-8918	MsG0080048298.01.T01:CDS
TGATCAGGAAGTAGCCTCCA+TGG	0.573050	contig268end:+8810	MsG0080048298.01.T01:intergenic
TAAATTGGTGGAAGGTTCCA+CGG	0.574279	contig268end:-8099	MsG0080048298.01.T01:CDS
ACAAATGAAAAGAAATAGGA+TGG	0.578302	contig268end:-8126	MsG0080048298.01.T01:CDS
ACCCCAGATGGTGAAAATTG+TGG	0.580727	contig268end:-6677	MsG0080048298.01.T01:CDS
ATTGATTATGGAGAGTCAGA+TGG	0.582505	contig268end:-7960	MsG0080048298.01.T01:CDS
AACCAATCCATTACAAACCA+TGG	0.584723	contig268end:-7458	MsG0080048298.01.T01:CDS
TCAGCTGTTTGATTGTGGGA+TGG	0.584783	contig268end:-6591	MsG0080048298.01.T01:CDS
GGAGGCTACTTCCTGATCAA+GGG	0.590334	contig268end:-8806	MsG0080048298.01.T01:CDS
GTACCTAGCTTACATGGTGA+AGG	0.591244	contig268end:-7742	MsG0080048298.01.T01:CDS
TATTGATAGAGAGATGAAGT+GGG	0.592487	contig268end:-8930	MsG0080048298.01.T01:CDS
TAGCTCTGCTACAAATGATG+TGG	0.594428	contig268end:+6481	MsG0080048298.01.T01:intergenic
CAGAGCTACGAAATAGAAGA+CGG	0.594914	contig268end:-6466	MsG0080048298.01.T01:CDS
TCCGTTTGTAATTCCCTCCG+TGG	0.607878	contig268end:+8082	MsG0080048298.01.T01:intergenic
AGATGCTTCCGAGACATGCT+AGG	0.608070	contig268end:-9559	MsG0080048298.01.T01:CDS
ATAAACGTGAAGCATTTCAT+CGG	0.611464	contig268end:-7893	MsG0080048298.01.T01:CDS
CAAACCTTACCCCAGTGAGA+AGG	0.623788	contig268end:+6710	MsG0080048298.01.T01:intergenic
CGAGACATGCTAGGTTGCAG+AGG	0.626387	contig268end:-9550	MsG0080048298.01.T01:CDS
TCAGTACACAGGAAAGGTCG+GGG	0.637306	contig268end:-7407	MsG0080048298.01.T01:CDS
GGAGTGATAAGTTTAAGACT+GGG	0.637929	contig268end:-8964	MsG0080048298.01.T01:CDS
AGATGGTGAAAATTGTGGAC+TGG	0.638877	contig268end:-6672	MsG0080048298.01.T01:CDS
AAGTACGGATTCAGTTACAT+TGG	0.642669	contig268end:+6616	MsG0080048298.01.T01:intergenic
ACAAGTTCAGTACACAGGAA+AGG	0.656004	contig268end:-7413	MsG0080048298.01.T01:CDS
AGACAAAGTCTTCCTAAATG+GGG	0.658835	contig268end:-6528	MsG0080048298.01.T01:CDS
ATCCCACAATCAAACAGCTG+AGG	0.660109	contig268end:+6593	MsG0080048298.01.T01:intergenic
AGGCAACAAGTTCAGTACAC+AGG	0.677661	contig268end:-7418	MsG0080048298.01.T01:CDS
TGCAGGCATCCTTCTCACTG+GGG	0.689696	contig268end:-6719	MsG0080048298.01.T01:intron
TATCCATACAGGTATCTCAA+CGG	0.690229	contig268end:+8031	MsG0080048298.01.T01:intergenic
ATGATACTATGACCGTTCTG+GGG	0.703583	contig268end:-6556	MsG0080048298.01.T01:CDS
GGTGACTGTGAATTTGACCA+TGG	0.715593	contig268end:-8827	MsG0080048298.01.T01:CDS
TCTCTTTGCATCCATCCGTG+AGG	0.721646	contig268end:-7922	MsG0080048298.01.T01:CDS
GATGGAAAGGATATCTGGTG+TGG	0.721811	contig268end:-7497	MsG0080048298.01.T01:CDS
TGGCTGAATTAAGAAGAACA+AGG	0.738169	contig268end:-7438	MsG0080048298.01.T01:CDS
ATTGGTGGAAGGTTCCACGG+AGG	0.762849	contig268end:-8096	MsG0080048298.01.T01:CDS
AAACGTGAAGCATTTCATCG+GGG	0.780766	contig268end:-7891	MsG0080048298.01.T01:CDS
GACTGTGAATTTGACCATGG+AGG	0.784934	contig268end:-8824	MsG0080048298.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAAATTCACAATTGTTTA+TGG	-	contig268end:7313-7332	MsG0080048298.01.T01:intron	15.0%
!!	TAAAACTAAATAAAATTACC+TGG	-	contig268end:8806-8825	MsG0080048298.01.T01:CDS	15.0%
!!!	AAAAAAATTGCATTTTGATT+GGG	-	contig268end:7629-7648	MsG0080048298.01.T01:CDS	15.0%
!!!	AATGCTTTCATTTATTTTAA+TGG	-	contig268end:9243-9262	MsG0080048298.01.T01:intron	15.0%
!!!	TAAAAAAATTGCATTTTGAT+TGG	-	contig268end:7628-7647	MsG0080048298.01.T01:CDS	15.0%
!!!	TAAACAATTGTGAATTTTAT+TGG	+	contig268end:7313-7332	MsG0080048298.01.T01:intergenic	15.0%
!!!	TTTTTACTTGAAAATTACTT+GGG	-	contig268end:6608-6627	MsG0080048298.01.T01:CDS	15.0%
!!!	TTTTTTACTTGAAAATTACT+TGG	-	contig268end:6607-6626	MsG0080048298.01.T01:CDS	15.0%
!!	AAAATACACACAAAAATCAA+AGG	+	contig268end:6911-6930	MsG0080048298.01.T01:intergenic	20.0%
!!	TAAAGAAGAGATTAATTTAC+AGG	+	contig268end:9032-9051	MsG0080048298.01.T01:intergenic	20.0%
!!	TAGAAGTTAAAAGTAACTTA+CGG	+	contig268end:8626-8645	MsG0080048298.01.T01:intergenic	20.0%
!!!	AAAGTTTTCATTTGAAATGT+GGG	-	contig268end:6526-6545	MsG0080048298.01.T01:CDS	20.0%
!!!	GTTCATATTTAACTTTCATT+CGG	+	contig268end:8699-8718	MsG0080048298.01.T01:intergenic	20.0%
!!!	TAAAGTTTTCATTTGAAATG+TGG	-	contig268end:6525-6544	MsG0080048298.01.T01:CDS	20.0%
!!!	TGATGTTCATTTTAAAATGT+GGG	-	contig268end:6795-6814	MsG0080048298.01.T01:intron	20.0%
!!!	TGTAAAATGTTTTCAAAACA+GGG	-	contig268end:7580-7599	MsG0080048298.01.T01:CDS	20.0%
!!!	TTGATGTTCATTTTAAAATG+TGG	-	contig268end:6794-6813	MsG0080048298.01.T01:intron	20.0%
!!!	TTGTAAAATGTTTTCAAAAC+AGG	-	contig268end:7579-7598	MsG0080048298.01.T01:CDS	20.0%
!!!	TTTATTTTAATGGAAGCTTA+TGG	-	contig268end:9253-9272	MsG0080048298.01.T01:intron	20.0%
!	AAATAGGATGGTTGTTAAAT+TGG	-	contig268end:7882-7901	MsG0080048298.01.T01:CDS	25.0%
!	AAATTTAACAAAGTTCATGC+AGG	+	contig268end:7345-7364	MsG0080048298.01.T01:intergenic	25.0%
!	AATTTAACAAAGTTCATGCA+GGG	+	contig268end:7344-7363	MsG0080048298.01.T01:intergenic	25.0%
!	ACAAATGAAAAGAAATAGGA+TGG	-	contig268end:7870-7889	MsG0080048298.01.T01:CDS	25.0%
!	AGAAGTTAAAAGTAACTTAC+GGG	+	contig268end:8625-8644	MsG0080048298.01.T01:intergenic	25.0%
!	AGTCACAAATGAAAAGAAAT+AGG	-	contig268end:7866-7885	MsG0080048298.01.T01:CDS	25.0%
!	CATTAAGGGATTAAAAAGAA+AGG	-	contig268end:8227-8246	MsG0080048298.01.T01:intron	25.0%
!	TAAACTACTTAAACATGTGA+AGG	-	contig268end:8748-8767	MsG0080048298.01.T01:intron	25.0%
!	TTCACATGTTTAAGTAGTTT+AGG	+	contig268end:8749-8768	MsG0080048298.01.T01:intergenic	25.0%
!	TTGAACATCAACTTTCATTT+GGG	+	contig268end:6485-6504	MsG0080048298.01.T01:intergenic	25.0%
!!	CTTTTTAATCCCTTAATGTT+CGG	+	contig268end:8225-8244	MsG0080048298.01.T01:intergenic	25.0%
!!	TTTTTGACGTTAAATCACTA+CGG	-	contig268end:6882-6901	MsG0080048298.01.T01:intron	25.0%
!!!	GTTTTAGTTTTCTTGTTGAT+TGG	+	contig268end:8792-8811	MsG0080048298.01.T01:intergenic	25.0%
!!!	TACTGATTATGTACGTTTTA+GGG	-	contig268end:7270-7289	MsG0080048298.01.T01:intron	25.0%
!!!	TGTGTGTATTTTTGAAATGT+GGG	-	contig268end:6919-6938	MsG0080048298.01.T01:intron	25.0%
!!!	TGTTTTTGTGTGTAAATAGT+GGG	-	contig268end:6639-6658	MsG0080048298.01.T01:CDS	25.0%
!!!	TTACTGATTATGTACGTTTT+AGG	-	contig268end:7269-7288	MsG0080048298.01.T01:intron	25.0%
!!!	TTGTGTGTATTTTTGAAATG+TGG	-	contig268end:6918-6937	MsG0080048298.01.T01:intron	25.0%
!!!	TTGTTTTTGTGTGTAAATAG+TGG	-	contig268end:6638-6657	MsG0080048298.01.T01:CDS	25.0%
	AAAGACAAAGTCTTCCTAAA+TGG	-	contig268end:9466-9485	MsG0080048298.01.T01:intron	30.0%
	AAGACAAAGTCTTCCTAAAT+GGG	-	contig268end:9467-9486	MsG0080048298.01.T01:intron	30.0%
	AATGCACTGCATTAAAATGT+AGG	+	contig268end:7672-7691	MsG0080048298.01.T01:intergenic	30.0%
	AATTTGTAGTCCCTATTTGA+AGG	-	contig268end:6832-6851	MsG0080048298.01.T01:intron	30.0%
	ATATTGATAGAGAGATGAAG+TGG	-	contig268end:7065-7084	MsG0080048298.01.T01:intron	30.0%
	CAAAAGCAATTTACAATCAG+CGG	+	contig268end:7764-7783	MsG0080048298.01.T01:intergenic	30.0%
	CAGCACTATAAAGAATTGAA+TGG	+	contig268end:8853-8872	MsG0080048298.01.T01:intergenic	30.0%
	GTTGAACATCAACTTTCATT+TGG	+	contig268end:6486-6505	MsG0080048298.01.T01:intergenic	30.0%
	TACAAAAGCAGTATTGTCTA+TGG	+	contig268end:7564-7583	MsG0080048298.01.T01:intergenic	30.0%
	TATGTCTTTCCGAACATTAA+GGG	-	contig268end:8213-8232	MsG0080048298.01.T01:intron	30.0%
	TATTGATAGAGAGATGAAGT+GGG	-	contig268end:7066-7085	MsG0080048298.01.T01:intron	30.0%
!	AAATGTGGGTTATCTTCATT+TGG	-	contig268end:6540-6559	MsG0080048298.01.T01:CDS	30.0%
!	AAGAGCAAATATTTCTGAAG+AGG	-	contig268end:7803-7822	MsG0080048298.01.T01:intron	30.0%
!	AAGGTTCTTTTCGAAATAAG+AGG	-	contig268end:8273-8292	MsG0080048298.01.T01:intron	30.0%
!	ACAGTACGTTCTAAATGAAA+TGG	-	contig268end:8983-9002	MsG0080048298.01.T01:CDS	30.0%
!	ACGTTCTAAATGAAATGGTT+GGG	-	contig268end:8988-9007	MsG0080048298.01.T01:CDS	30.0%
!	ATAAACGTGAAGCATTTCAT+CGG	-	contig268end:8103-8122	MsG0080048298.01.T01:CDS	30.0%
!	ATTGAGGATCTCATTGATTA+TGG	-	contig268end:8024-8043	MsG0080048298.01.T01:CDS	30.0%
!	ATTGGTAGCAATATTACAAG+GGG	+	contig268end:8774-8793	MsG0080048298.01.T01:intergenic	30.0%
!	GATTGGTAGCAATATTACAA+GGG	+	contig268end:8775-8794	MsG0080048298.01.T01:intergenic	30.0%
!	GTAAATAGTGGGAAAAAGTT+CGG	-	contig268end:6650-6669	MsG0080048298.01.T01:CDS	30.0%
!	TACGTTCTAAATGAAATGGT+TGG	-	contig268end:8987-9006	MsG0080048298.01.T01:CDS	30.0%
!	TGATTGGTAGCAATATTACA+AGG	+	contig268end:8776-8795	MsG0080048298.01.T01:intergenic	30.0%
!	TTTTGTACAGTGTTATCCAA+TGG	-	contig268end:7402-7421	MsG0080048298.01.T01:CDS	30.0%
!!	TTGTGGACTGGTAAAAAATT+TGG	-	contig268end:9336-9355	MsG0080048298.01.T01:intron	30.0%
	AAAAGGATGGAAAGGATATC+TGG	-	contig268end:8494-8513	MsG0080048298.01.T01:intron	35.0%
	AACCAATCCATTACAAACCA+TGG	-	contig268end:8538-8557	MsG0080048298.01.T01:intron	35.0%
	AAGTACGGATTCAGTTACAT+TGG	+	contig268end:9383-9402	MsG0080048298.01.T01:intergenic	35.0%
	ACCATAAATGTGCCATATAG+TGG	-	contig268end:7501-7520	MsG0080048298.01.T01:CDS	35.0%
	ACTATATGGCACATTTATGG+TGG	+	contig268end:7502-7521	MsG0080048298.01.T01:intergenic	35.0%
	AGACAAAGTCTTCCTAAATG+GGG	-	contig268end:9468-9487	MsG0080048298.01.T01:intron	35.0%
	AGATCAATCCATGTAAAGGT+TGG	+	contig268end:9096-9115	MsG0080048298.01.T01:intergenic	35.0%
	AGCTGATACTGAACTTGAAA+TGG	+	contig268end:8925-8944	MsG0080048298.01.T01:intergenic	35.0%
	AGGGATTAAAAAGAAAGGCT+AGG	-	contig268end:8232-8251	MsG0080048298.01.T01:intron	35.0%
	AGTCACAGAACCTTCAAATA+GGG	+	contig268end:6845-6864	MsG0080048298.01.T01:intergenic	35.0%
	ATCCTTTCAAAAGGATGGAA+AGG	-	contig268end:8486-8505	MsG0080048298.01.T01:intron	35.0%
	ATGGTTGTTAAATTGGTGGA+AGG	-	contig268end:7889-7908	MsG0080048298.01.T01:CDS	35.0%
	ATTGATTATGGAGAGTCAGA+TGG	-	contig268end:8036-8055	MsG0080048298.01.T01:CDS	35.0%
	CACTTCAGATAAAGAGATTG+AGG	-	contig268end:8008-8027	MsG0080048298.01.T01:CDS	35.0%
	CTGTAATGTGCTTTCATTGA+GGG	-	contig268end:8946-8965	MsG0080048298.01.T01:CDS	35.0%
	GACGCTTCCATTATTACAAA+CGG	-	contig268end:8428-8447	MsG0080048298.01.T01:intron	35.0%
	GACTAGATCAATCCATGTAA+AGG	+	contig268end:9100-9119	MsG0080048298.01.T01:intergenic	35.0%
	GATCAATCCATGTAAAGGTT+GGG	+	contig268end:9095-9114	MsG0080048298.01.T01:intergenic	35.0%
	GCAAAAAACAGTATCCATAC+AGG	+	contig268end:7979-7998	MsG0080048298.01.T01:intergenic	35.0%
	GGCCAAAATTGCAGAAATTT+GGG	-	contig268end:7522-7541	MsG0080048298.01.T01:CDS	35.0%
	GGTTTCAAATACTCCGTATT+GGG	-	contig268end:7831-7850	MsG0080048298.01.T01:intron	35.0%
	GTAAAAAATTTGGCTGTCAC+AGG	-	contig268end:9346-9365	MsG0080048298.01.T01:intron	35.0%
	GTATGTCTTTCCGAACATTA+AGG	-	contig268end:8212-8231	MsG0080048298.01.T01:intron	35.0%
	GTGACAAGGGAAATAACTAT+TGG	-	contig268end:7091-7110	MsG0080048298.01.T01:intron	35.0%
	GTGTTATCCAATGGAAGTTA+TGG	-	contig268end:7411-7430	MsG0080048298.01.T01:CDS	35.0%
	GTTCTGTGTGTGTTAATTTC+AGG	-	contig268end:6988-7007	MsG0080048298.01.T01:intron	35.0%
	TAGGATGGTTGTTAAATTGG+TGG	-	contig268end:7885-7904	MsG0080048298.01.T01:CDS	35.0%
	TATATGTTCCGAAGAAGGTT+CGG	-	contig268end:7011-7030	MsG0080048298.01.T01:intron	35.0%
	TATCCATACAGGTATCTCAA+CGG	+	contig268end:7968-7987	MsG0080048298.01.T01:intergenic	35.0%
	TCTGTAATGTGCTTTCATTG+AGG	-	contig268end:8945-8964	MsG0080048298.01.T01:CDS	35.0%
	TGGCCAAAATTGCAGAAATT+TGG	-	contig268end:7521-7540	MsG0080048298.01.T01:CDS	35.0%
	TGGCTGAATTAAGAAGAACA+AGG	-	contig268end:8558-8577	MsG0080048298.01.T01:intron	35.0%
	TGTAATGTGCTTTCATTGAG+GGG	-	contig268end:8947-8966	MsG0080048298.01.T01:CDS	35.0%
	TGTGTAAATAGTAGTAGAGC+TGG	-	contig268end:6698-6717	MsG0080048298.01.T01:CDS	35.0%
	TGTTCTTCTTAATTCAGCCA+TGG	+	contig268end:8558-8577	MsG0080048298.01.T01:intergenic	35.0%
	TTAGTCCCTAAAGCAAAGTA+GGG	+	contig268end:7372-7391	MsG0080048298.01.T01:intergenic	35.0%
	TTAGTCCCTACTTTGCTTTA+GGG	-	contig268end:7364-7383	MsG0080048298.01.T01:intron	35.0%
	TTCTTAGAGGAACGTGTAAA+AGG	-	contig268end:8144-8163	MsG0080048298.01.T01:CDS	35.0%
	TTGGAGACCGTTTGTAATAA+TGG	+	contig268end:8438-8457	MsG0080048298.01.T01:intergenic	35.0%
	TTTAGTCCCTAAAGCAAAGT+AGG	+	contig268end:7373-7392	MsG0080048298.01.T01:intergenic	35.0%
	TTTAGTCCCTACTTTGCTTT+AGG	-	contig268end:7363-7382	MsG0080048298.01.T01:intron	35.0%
!	AAATATTTCTGAAGAGGCTC+TGG	-	contig268end:7809-7828	MsG0080048298.01.T01:intron	35.0%
!	AATATTTCTGAAGAGGCTCT+GGG	-	contig268end:7810-7829	MsG0080048298.01.T01:intron	35.0%
!	AATTCAGCCATGGTTTGTAA+TGG	+	contig268end:8548-8567	MsG0080048298.01.T01:intergenic	35.0%
!	ATCCTTTCCATCCTTTTGAA+AGG	+	contig268end:8491-8510	MsG0080048298.01.T01:intergenic	35.0%
!	GACCCAAATTTCTGCAATTT+TGG	+	contig268end:7527-7546	MsG0080048298.01.T01:intergenic	35.0%
!	GACTAGATGCTGAGTTTTTA+TGG	-	contig268end:8881-8900	MsG0080048298.01.T01:CDS	35.0%
!	GGAGTGATAAGTTTAAGACT+GGG	-	contig268end:7032-7051	MsG0080048298.01.T01:intron	35.0%
!	TAAACGTGAAGCATTTCATC+GGG	-	contig268end:8104-8123	MsG0080048298.01.T01:CDS	35.0%
!	TAGATGCTGAGTTTTTATGG+TGG	-	contig268end:8884-8903	MsG0080048298.01.T01:CDS	35.0%
!!	GAAAGTTGATGTTCAACTTC+AGG	-	contig268end:6489-6508	MsG0080048298.01.T01:CDS	35.0%
!!!	TGGATACTGTTTTTTGCTCT+TGG	-	contig268end:7982-8001	MsG0080048298.01.T01:CDS	35.0%
!!!	TTTGTCTTTTTTCCCCAGAA+CGG	+	contig268end:9455-9474	MsG0080048298.01.T01:intergenic	35.0%
	ACAAGTTCAGTACACAGGAA+AGG	-	contig268end:8583-8602	MsG0080048298.01.T01:intron	40.0%
	ACTGCAAGTGTGTGTTAAAC+AGG	-	contig268end:6765-6784	MsG0080048298.01.T01:intron	40.0%
	AGATCAGACTTGACCATAAC+AGG	+	contig268end:7124-7143	MsG0080048298.01.T01:intergenic	40.0%
	AGATGGTGAAAATTGTGGAC+TGG	-	contig268end:9324-9343	MsG0080048298.01.T01:intron	40.0%
	ATCAAACAGCTGAGGAAGTA+CGG	+	contig268end:9398-9417	MsG0080048298.01.T01:intergenic	40.0%
	ATGATACTATGACCGTTCTG+GGG	-	contig268end:9440-9459	MsG0080048298.01.T01:intron	40.0%
	CAGAGCTACGAAATAGAAGA+CGG	-	contig268end:9530-9549	MsG0080048298.01.T01:CDS	40.0%
	CAGTCACAGAACCTTCAAAT+AGG	+	contig268end:6846-6865	MsG0080048298.01.T01:intergenic	40.0%
	CATGGACACATCCTTTCAAA+AGG	-	contig268end:8477-8496	MsG0080048298.01.T01:intron	40.0%
	GAACATCTCGATCTCCATAA+AGG	+	contig268end:8388-8407	MsG0080048298.01.T01:intergenic	40.0%
	GACACATCCTTTCAAAAGGA+TGG	-	contig268end:8481-8500	MsG0080048298.01.T01:intron	40.0%
	GATGATACTATGACCGTTCT+GGG	-	contig268end:9439-9458	MsG0080048298.01.T01:intron	40.0%
	GCCACTATATGGCACATTTA+TGG	+	contig268end:7505-7524	MsG0080048298.01.T01:intergenic	40.0%
	GGGTTTCAAATACTCCGTAT+TGG	-	contig268end:7830-7849	MsG0080048298.01.T01:intron	40.0%
	GTATTGTCTATGGCATACTG+TGG	+	contig268end:7554-7573	MsG0080048298.01.T01:intergenic	40.0%
	TAAATTGGTGGAAGGTTCCA+CGG	-	contig268end:7897-7916	MsG0080048298.01.T01:CDS	40.0%
	TAACTTTCATTCGGTCAGCT+AGG	+	contig268end:8690-8709	MsG0080048298.01.T01:intergenic	40.0%
	TAATGGAAGCTTATGGTTGC+AGG	-	contig268end:9260-9279	MsG0080048298.01.T01:intron	40.0%
	TATTGGTAGACTGCCTGTTA+TGG	-	contig268end:7108-7127	MsG0080048298.01.T01:intron	40.0%
	TCAACTTCCCAACCTTTACA+TGG	-	contig268end:9085-9104	MsG0080048298.01.T01:intron	40.0%
	TCAGGTATATGTTCCGAAGA+AGG	-	contig268end:7006-7025	MsG0080048298.01.T01:intron	40.0%
	TCGAAATAAGAGGCTTGAGT+TGG	-	contig268end:8283-8302	MsG0080048298.01.T01:intron	40.0%
	TGATGATACTATGACCGTTC+TGG	-	contig268end:9438-9457	MsG0080048298.01.T01:intron	40.0%
	TGGATGAGTGAAGCTGAAAA+AGG	-	contig268end:7148-7167	MsG0080048298.01.T01:intron	40.0%
	TTATCACTCCGAACCTTCTT+CGG	+	contig268end:7022-7041	MsG0080048298.01.T01:intergenic	40.0%
	TTCCTCAGCTGTTTGATTGT+GGG	-	contig268end:9401-9420	MsG0080048298.01.T01:intron	40.0%
	TTGAAAGCAACAGCCCAATA+CGG	+	contig268end:7847-7866	MsG0080048298.01.T01:intergenic	40.0%
!	AAACGTGAAGCATTTCATCG+GGG	-	contig268end:8105-8124	MsG0080048298.01.T01:CDS	40.0%
!	AATAGTGGGAAAAAGTTCGG+TGG	-	contig268end:6653-6672	MsG0080048298.01.T01:CDS	40.0%
!	ACATGGATTGATCTAGTCTC+TGG	-	contig268end:9102-9121	MsG0080048298.01.T01:intron	40.0%
!	AGTCCACAATTTTCACCATC+TGG	+	contig268end:9325-9344	MsG0080048298.01.T01:intergenic	40.0%
!	CGGAGTGATAAGTTTAAGAC+TGG	-	contig268end:7031-7050	MsG0080048298.01.T01:intron	40.0%
!	GAACGCTCTTCTTTTCTTAG+AGG	-	contig268end:8131-8150	MsG0080048298.01.T01:CDS	40.0%
!	GTCCACAATTTTCACCATCT+GGG	+	contig268end:9324-9343	MsG0080048298.01.T01:intergenic	40.0%
!	TAGCTCTGCTACAAATGATG+TGG	+	contig268end:9518-9537	MsG0080048298.01.T01:intergenic	40.0%
!	TCCACAATTTTCACCATCTG+GGG	+	contig268end:9323-9342	MsG0080048298.01.T01:intergenic	40.0%
!!	AACTGCGAGTTTTAATGACC+AGG	+	contig268end:8827-8846	MsG0080048298.01.T01:intergenic	40.0%
!!	AGCCATGGTTTGTAATGGAT+TGG	+	contig268end:8543-8562	MsG0080048298.01.T01:intergenic	40.0%
!!	CTGCAATTTTGGCCACTATA+TGG	+	contig268end:7516-7535	MsG0080048298.01.T01:intergenic	40.0%
	AAGTCTTCCTAAATGGGGAC+TGG	-	contig268end:9473-9492	MsG0080048298.01.T01:intron	45.0%
	AAGTGCACTTTGCACATGCT+CGG	-	contig268end:8333-8352	MsG0080048298.01.T01:intron	45.0%
	ACCCCAGATGGTGAAAATTG+TGG	-	contig268end:9319-9338	MsG0080048298.01.T01:intron	45.0%
	ACTCAGCATCTAGTCTACAC+AGG	+	contig268end:8876-8895	MsG0080048298.01.T01:intergenic	45.0%
	AGATGAAGTGGGATGTGACA+AGG	-	contig268end:7077-7096	MsG0080048298.01.T01:intron	45.0%
	AGGCAACAAGTTCAGTACAC+AGG	-	contig268end:8578-8597	MsG0080048298.01.T01:intron	45.0%
	AGTCTTCCTAAATGGGGACT+GGG	-	contig268end:9474-9493	MsG0080048298.01.T01:intron	45.0%
	ATAGGCGCCATAACTTCCAT+TGG	+	contig268end:7421-7440	MsG0080048298.01.T01:intergenic	45.0%
	ATCCCACAATCAAACAGCTG+AGG	+	contig268end:9406-9425	MsG0080048298.01.T01:intergenic	45.0%
	ATGGAAGTTATGGCGCCTAT+TGG	-	contig268end:7421-7440	MsG0080048298.01.T01:CDS	45.0%
	CACTCGTCAATAGATTCTGC+AGG	+	contig268end:8183-8202	MsG0080048298.01.T01:intergenic	45.0%
	CTCCAGTAGAAAACGCTCTT+TGG	+	contig268end:8457-8476	MsG0080048298.01.T01:intergenic	45.0%
	CTTCCTCAGCTGTTTGATTG+TGG	-	contig268end:9400-9419	MsG0080048298.01.T01:intron	45.0%
	GAACCTTCACCATGTAAGCT+AGG	+	contig268end:8260-8279	MsG0080048298.01.T01:intergenic	45.0%
	GACTGTGAATTTGACCATGG+AGG	-	contig268end:7172-7191	MsG0080048298.01.T01:intron	45.0%
	GAGAAATGAGTTGCCTCATC+AGG	-	contig268end:9552-9571	MsG0080048298.01.T01:CDS	45.0%
	GATGAAGTGGGATGTGACAA+GGG	-	contig268end:7078-7097	MsG0080048298.01.T01:intron	45.0%
	GATGGAAAGGATATCTGGTG+TGG	-	contig268end:8499-8518	MsG0080048298.01.T01:intron	45.0%
	GGTGACTGTGAATTTGACCA+TGG	-	contig268end:7169-7188	MsG0080048298.01.T01:intron	45.0%
	GTACCTAGCTTACATGGTGA+AGG	-	contig268end:8254-8273	MsG0080048298.01.T01:intron	45.0%
	GTTCAGTACACAGGAAAGGT+CGG	-	contig268end:8587-8606	MsG0080048298.01.T01:intron	45.0%
	TCAGCTGTTTGATTGTGGGA+TGG	-	contig268end:9405-9424	MsG0080048298.01.T01:intron	45.0%
	TCCACGGAGGGAATTACAAA+CGG	-	contig268end:7913-7932	MsG0080048298.01.T01:CDS	45.0%
	TCGTCAATAGATTCTGCAGG+TGG	+	contig268end:8180-8199	MsG0080048298.01.T01:intergenic	45.0%
	TGGTCAAGTCTGATCTTTGC+TGG	-	contig268end:7128-7147	MsG0080048298.01.T01:intron	45.0%
	TGTCCGTTGAGATACCTGTA+TGG	-	contig268end:7962-7981	MsG0080048298.01.T01:CDS	45.0%
	TGTTTCCTTTCTACCCCAGA+TGG	-	contig268end:9307-9326	MsG0080048298.01.T01:intron	45.0%
	TTCAGTACACAGGAAAGGTC+GGG	-	contig268end:8588-8607	MsG0080048298.01.T01:intron	45.0%
	TTGTCTATGGCATACTGTGG+CGG	+	contig268end:7551-7570	MsG0080048298.01.T01:intergenic	45.0%
!	TTTCACCATCTGGGGTAGAA+AGG	+	contig268end:9315-9334	MsG0080048298.01.T01:intergenic	45.0%
!!	AATAAGAGGCTTGAGTTGGC+TGG	-	contig268end:8287-8306	MsG0080048298.01.T01:intron	45.0%
!!!	CTCCAAAGAGCGTTTTCTAC+TGG	-	contig268end:8452-8471	MsG0080048298.01.T01:intron	45.0%
	AGATGCTTCCGAGACATGCT+AGG	-	contig268end:6437-6456	MsG0080048298.01.T01:CDS	50.0%
	CAAACCTTACCCCAGTGAGA+AGG	+	contig268end:9289-9308	MsG0080048298.01.T01:intergenic	50.0%
	CACGTTTATCGTCTGCCTCA+CGG	+	contig268end:8092-8111	MsG0080048298.01.T01:intergenic	50.0%
	CTCTGCAACCTAGCATGTCT+CGG	+	contig268end:6448-6467	MsG0080048298.01.T01:intergenic	50.0%
	CTGGTGTGGTTGCAACTCTT+GGG	-	contig268end:8513-8532	MsG0080048298.01.T01:intron	50.0%
	GAAGTTATGGCGCCTATTGG+TGG	-	contig268end:7424-7443	MsG0080048298.01.T01:CDS	50.0%
	GCTCTGCAGAGAGACCTTTA+TGG	-	contig268end:8371-8390	MsG0080048298.01.T01:intron	50.0%
	GGAGGCTACTTCCTGATCAA+GGG	-	contig268end:7190-7209	MsG0080048298.01.T01:intron	50.0%
	GGCTAGGTACCTAGCTTACA+TGG	-	contig268end:8248-8267	MsG0080048298.01.T01:intron	50.0%
	GGTCAAAATCCGCCACCAAT+AGG	+	contig268end:7439-7458	MsG0080048298.01.T01:intergenic	50.0%
	GTGAATGGCGGTCGATATTG+CGG	-	contig268end:7470-7489	MsG0080048298.01.T01:CDS	50.0%
	TCAGTACACAGGAAAGGTCG+GGG	-	contig268end:8589-8608	MsG0080048298.01.T01:intron	50.0%
	TCCGTTTGTAATTCCCTCCG+TGG	+	contig268end:7917-7936	MsG0080048298.01.T01:intergenic	50.0%
	TCTCTTTGCATCCATCCGTG+AGG	-	contig268end:8074-8093	MsG0080048298.01.T01:CDS	50.0%
	TCTGGTGTGGTTGCAACTCT+TGG	-	contig268end:8512-8531	MsG0080048298.01.T01:intron	50.0%
	TGAATGGCGGTCGATATTGC+GGG	-	contig268end:7471-7490	MsG0080048298.01.T01:CDS	50.0%
	TGATCAGGAAGTAGCCTCCA+TGG	+	contig268end:7189-7208	MsG0080048298.01.T01:intergenic	50.0%
	TGGAGGCTACTTCCTGATCA+AGG	-	contig268end:7189-7208	MsG0080048298.01.T01:intron	50.0%
	TTCCTAAATGGGGACTGGGT+TGG	-	contig268end:9478-9497	MsG0080048298.01.T01:intron	50.0%
	TTGCAGGCATCCTTCTCACT+GGG	-	contig268end:9276-9295	MsG0080048298.01.T01:intron	50.0%
	TTTATCGTCTGCCTCACGGA+TGG	+	contig268end:8088-8107	MsG0080048298.01.T01:intergenic	50.0%
!	GAGCGTTTTCTACTGGAGCA+TGG	-	contig268end:8459-8478	MsG0080048298.01.T01:intron	50.0%
	ATTGGTGGAAGGTTCCACGG+AGG	-	contig268end:7900-7919	MsG0080048298.01.T01:CDS	55.0%
	CCTTCTCAGCACCCTTGATC+AGG	+	contig268end:7204-7223	MsG0080048298.01.T01:intergenic	55.0%
	CGAGACATGCTAGGTTGCAG+AGG	-	contig268end:6446-6465	MsG0080048298.01.T01:CDS	55.0%
	CTCCAACCCAGTCCCCATTT+AGG	+	contig268end:9483-9502	MsG0080048298.01.T01:intergenic	55.0%
	GCACATGCTCGGAAGCGAAT+GGG	-	contig268end:8344-8363	MsG0080048298.01.T01:intron	55.0%
	GCATCCTTCTCACTGGGGTA+AGG	-	contig268end:9282-9301	MsG0080048298.01.T01:intron	55.0%
	GTTATGGCGCCTATTGGTGG+CGG	-	contig268end:7427-7446	MsG0080048298.01.T01:CDS	55.0%
	GTTGCAGGCATCCTTCTCAC+TGG	-	contig268end:9275-9294	MsG0080048298.01.T01:intron	55.0%
	TCGACCGCCATTCACCACAT+CGG	+	contig268end:7465-7484	MsG0080048298.01.T01:intergenic	55.0%
	TGCACATGCTCGGAAGCGAA+TGG	-	contig268end:8343-8362	MsG0080048298.01.T01:intron	55.0%
	TGCAGGCATCCTTCTCACTG+GGG	-	contig268end:9277-9296	MsG0080048298.01.T01:intron	55.0%
	TGCTCGGAAGCGAATGGGAA+AGG	-	contig268end:8349-8368	MsG0080048298.01.T01:intron	55.0%
	TTGGTGGAAGGTTCCACGGA+GGG	-	contig268end:7901-7920	MsG0080048298.01.T01:CDS	55.0%
!!	CCTGATCAAGGGTGCTGAGA+AGG	-	contig268end:7201-7220	MsG0080048298.01.T01:intron	55.0%
!!	GGATTTTGACCTCGCCGATG+TGG	-	contig268end:7448-7467	MsG0080048298.01.T01:CDS	55.0%
	CTCGCCGATGTGGTGAATGG+CGG	-	contig268end:7458-7477	MsG0080048298.01.T01:CDS	60.0%
	GACCTCGCCGATGTGGTGAA+TGG	-	contig268end:7455-7474	MsG0080048298.01.T01:CDS	60.0%
!	TGAGTTGGCTGGTGAGCTGC+TGG	-	contig268end:8298-8317	MsG0080048298.01.T01:intron	60.0%
	CGCCATTCACCACATCGGCG+AGG	+	contig268end:7460-7479	MsG0080048298.01.T01:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
contig268end	gene	6433	9585	6433	ID=MsG0080048298.01;Name=MsG0080048298.01
contig268end	mRNA	6433	9585	6433	ID=MsG0080048298.01.T01;Parent=MsG0080048298.01;Name=MsG0080048298.01.T01;_AED=0.19;_eAED=0.39;_QI=0\|0\|0\|1\|1\|1\|5\|0\|447
contig268end	exon	9508	9585	9508	ID=MsG0080048298.01.T01:exon:5411;Parent=MsG0080048298.01.T01
contig268end	exon	8796	9008	8796	ID=MsG0080048298.01.T01:exon:5410;Parent=MsG0080048298.01.T01
contig268end	exon	7851	8228	7851	ID=MsG0080048298.01.T01:exon:5409;Parent=MsG0080048298.01.T01
contig268end	exon	7394	7764	7394	ID=MsG0080048298.01.T01:exon:5408;Parent=MsG0080048298.01.T01
contig268end	exon	6433	6736	6433	ID=MsG0080048298.01.T01:exon:5407;Parent=MsG0080048298.01.T01
contig268end	CDS	9508	9585	9508	ID=MsG0080048298.01.T01:cds;Parent=MsG0080048298.01.T01
contig268end	CDS	8796	9008	8796	ID=MsG0080048298.01.T01:cds;Parent=MsG0080048298.01.T01
contig268end	CDS	7851	8228	7851	ID=MsG0080048298.01.T01:cds;Parent=MsG0080048298.01.T01
contig268end	CDS	7394	7764	7394	ID=MsG0080048298.01.T01:cds;Parent=MsG0080048298.01.T01
contig268end	CDS	6433	6736	6433	ID=MsG0080048298.01.T01:cds;Parent=MsG0080048298.01.T01

Gene Sequence

>MsG0080048298.01.T01

ATGAAGATGCTTCCGAGACATGCTAGGTTGCAGAGGATGACTTATGCTTCCCAAATGAAAGTTGATGTTCAACTTCAGGTATATGTTCCGAAGAAGGTTCGGAGTGATAAGTTTAAGACTGGGAAAGAAGAGTATATTGATAGAGAGATGAAGTGGGATGTGACAAGGGAAATAACTATTGGTAGACTGCCTGTTATGGTCAAGTCTGATCTTTGCTGGATGAGTGAAGCTGAAAAAGGTGACTGTGAATTTGACCATGGAGGCTACTTCCTGATCAAGGGTGCTGAGAAGATTTTTATTGCACAAGAGCAAATATTTCTGAAGAGGCTCTGGGTTTCAAATACTCCGTATTGGGCTGTTGCTTTCAAGTCACAAATGAAAAGAAATAGGATGGTTGTTAAATTGGTGGAAGGTTCCACGGAGGGAATTACAAACGGAGAGAAGCTGCTCACAATATATTTTTTGTCCGTTGAGATACCTGTATGGATACTGTTTTTTGCTCTTGGTGTCACTTCAGATAAAGAGATTGAGGATCTCATTGATTATGGAGAGTCAGATGGAAGAATTGAAAACATTCTCTTTGCATCCATCCGTGAGGCAGACGATAAACGTGAAGCATTTCATCGGGGAATGAACGCTCTTCTTTTCTTAGAGGAACGTGTAAAAGGCGTACCTAGCTTACATGGTGAAGGTTCTTTTCGAAATAAGAGGCTTGAGTTGGCTGGTGAGCTGCTGGAGCGCGAGATTAAAGTGCACTTTGCACATGCTCGGAAGCGAATGGGAAAGGCTCTGCAGAGAGACCTTTATGGAGATCGAGATGTTCGTCAAATTGAGCACTATCTTGACGCTTCCATTATTACAAACGGTCTCCAAAGAGCGTTTTCTACTGGAGCATGGACACATCCTTTCAAAAGGATGGAAAGGATATCTGGTGTGGTTGCAACTCTTGGGCGAACCAATCCATTACAAACCATGGCTGAATTAAGAAGAACAAGGCAACAAGTTCAGTACACAGGAAAGGTCGGGGATGCTAGATACCCGCATCCTTCTCACTGGGGTAAGGTTTGTTTCCTTTCTACCCCAGATGGTGAAAATTGTGGACTGGTAAAAAATTTGGCTGTCACAGGAGTAGTAAGTACCAATGTAACTGAATCCGTACTTCCTCAGCTGTTTGATTGTGGGATGGAAGAACTTATTGATGATACTATGACCGTTCTGGGGAAAAAAGACAAAGTCTTCCTAAATGGGGACTGGGTTGGAGTTTGTTCAGATTCCACATCATTTGTAGCAGAGCTACGAAATAGAAGACGGAGAAATGAGTTGCCTCATCAGGTTCGCTTTTAA

Protein sequence

>MsG0080048298.01.T01

MKMLPRHARLQRMTYASQMKVDVQLQVYVPKKVRSDKFKTGKEEYIDREMKWDVTREITIGRLPVMVKSDLCWMSEAEKGDCEFDHGGYFLIKGAEKIFIAQEQIFLKRLWVSNTPYWAVAFKSQMKRNRMVVKLVEGSTEGITNGEKLLTIYFLSVEIPVWILFFALGVTSDKEIEDLIDYGESDGRIENILFASIREADDKREAFHRGMNALLFLEERVKGVPSLHGEGSFRNKRLELAGELLEREIKVHFAHARKRMGKALQRDLYGDRDVRQIEHYLDASIITNGLQRAFSTGAWTHPFKRMERISGVVATLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGVVSTNVTESVLPQLFDCGMEELIDDTMTVLGKKDKVFLNGDWVGVCSDSTSFVAELRNRRRRNELPHQVRF*