Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039527.01.T01 | XP_003623729.1 | 99.088 | 329 | 3 | 0 | 17 | 345 | 32 | 360 | 0 | 682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039527.01.T01 | Q42800 | 86.957 | 322 | 42 | 0 | 24 | 345 | 5 | 326 | 0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039527.01.T01 | G7L0A3 | 99.088 | 329 | 3 | 0 | 17 | 345 | 32 | 360 | 0.0 | 682 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048291.01 | MsG0780039527.01 | 0.800282 | 1.550560e-48 | 7.191521e-46 |
| MsG0080048298.01 | MsG0780039527.01 | 0.804248 | 2.366667e-49 | 1.214241e-46 |
| MsG0080048600.01 | MsG0780039527.01 | 0.818128 | 2.303775e-52 | 1.709776e-49 |
| MsG0080048856.01 | MsG0780039527.01 | 0.808716 | 2.701443e-50 | 1.555770e-47 |
| MsG0180000065.01 | MsG0780039527.01 | 0.808660 | 2.777512e-50 | 1.597244e-47 |
| MsG0180000145.01 | MsG0780039527.01 | 0.809524 | 1.813853e-50 | 1.067381e-47 |
| MsG0180000178.01 | MsG0780039527.01 | 0.813516 | 2.460486e-51 | 1.610223e-48 |
| MsG0180000470.01 | MsG0780039527.01 | 0.806612 | 7.559573e-50 | 4.121282e-47 |
| MsG0180001172.01 | MsG0780039527.01 | 0.804187 | 2.436264e-49 | 1.248055e-46 |
| MsG0180001892.01 | MsG0780039527.01 | 0.820024 | 8.534985e-53 | 6.676782e-50 |
| MsG0180003786.01 | MsG0780039527.01 | 0.806398 | 8.387987e-50 | 4.547976e-47 |
| MsG0180003920.01 | MsG0780039527.01 | 0.835820 | 1.343325e-56 | 1.661516e-53 |
| MsG0180003943.01 | MsG0780039527.01 | 0.801397 | 9.181019e-49 | 4.379828e-46 |
| MsG0180004099.01 | MsG0780039527.01 | 0.816192 | 6.276391e-52 | 4.417624e-49 |
| MsG0180004149.01 | MsG0780039527.01 | 0.805459 | 1.321260e-49 | 6.994110e-47 |
| MsG0180004260.01 | MsG0780039527.01 | 0.800469 | 1.420469e-48 | 6.619070e-46 |
| MsG0180004389.01 | MsG0780039527.01 | 0.815778 | 7.764473e-52 | 5.403761e-49 |
| MsG0180004463.01 | MsG0780039527.01 | 0.849830 | 2.513350e-60 | 4.825889e-57 |
| MsG0180004711.01 | MsG0780039527.01 | 0.824740 | 6.851317e-54 | 6.122344e-51 |
| MsG0180004765.01 | MsG0780039527.01 | 0.807418 | 5.103264e-50 | 2.841014e-47 |
| MsG0180004970.01 | MsG0780039527.01 | 0.805312 | 1.418304e-49 | 7.479407e-47 |
| MsG0180004975.01 | MsG0780039527.01 | 0.829193 | 5.901436e-55 | 5.997307e-52 |
| MsG0180005664.01 | MsG0780039527.01 | 0.809047 | 2.294496e-50 | 1.333168e-47 |
| MsG0180006000.01 | MsG0780039527.01 | 0.846230 | 2.474237e-59 | 4.229806e-56 |
| MsG0280006405.01 | MsG0780039527.01 | 0.816135 | 6.464911e-52 | 4.543158e-49 |
| MsG0280010698.01 | MsG0780039527.01 | 0.816940 | 4.266595e-52 | 3.065318e-49 |
| MsG0280010778.01 | MsG0780039527.01 | 0.845753 | 3.336012e-59 | 5.616913e-56 |
| MsG0280010779.01 | MsG0780039527.01 | 0.807432 | 5.068784e-50 | 2.822790e-47 |
| MsG0280010980.01 | MsG0780039527.01 | 0.804733 | 1.875173e-49 | 9.742972e-47 |
| MsG0280011003.01 | MsG0780039527.01 | 0.817418 | 3.332333e-52 | 2.425502e-49 |
| MsG0280011013.01 | MsG0780039527.01 | 0.821872 | 3.203862e-53 | 2.638752e-50 |
| MsG0280011014.01 | MsG0780039527.01 | 0.862566 | 4.629947e-64 | 1.361922e-60 |
| MsG0280011282.01 | MsG0780039527.01 | 0.833816 | 4.291852e-56 | 4.999141e-53 |
| MsG0280011341.01 | MsG0780039527.01 | 0.806021 | 1.006951e-49 | 5.407871e-47 |
| MsG0280011388.01 | MsG0780039527.01 | 0.805057 | 1.603731e-49 | 8.402142e-47 |
| MsG0380012009.01 | MsG0780039527.01 | 0.810167 | 1.318910e-50 | 7.893722e-48 |
| MsG0380013178.01 | MsG0780039527.01 | 0.826676 | 2.380373e-54 | 2.247541e-51 |
| MsG0380013475.01 | MsG0780039527.01 | 0.806683 | 7.303393e-50 | 3.988832e-47 |
| MsG0380014573.01 | MsG0780039527.01 | 0.825279 | 5.110837e-54 | 4.637522e-51 |
| MsG0380014703.01 | MsG0780039527.01 | 0.816368 | 5.732943e-52 | 4.054656e-49 |
| MsG0680030949.01 | MsG0780039527.01 | 0.807814 | 4.205746e-50 | 2.365560e-47 |
| MsG0680031214.01 | MsG0780039527.01 | 0.803525 | 3.344826e-49 | 1.684681e-46 |
| MsG0680031431.01 | MsG0780039527.01 | 0.804098 | 2.542146e-49 | 1.299364e-46 |
| MsG0680031488.01 | MsG0780039527.01 | 0.816930 | 4.288877e-52 | 3.080315e-49 |
| MsG0680031506.01 | MsG0780039527.01 | 0.814531 | 1.469262e-51 | 9.883678e-49 |
| MsG0680033412.01 | MsG0780039527.01 | 0.802514 | 5.410378e-49 | 2.655336e-46 |
| MsG0680034853.01 | MsG0780039527.01 | 0.802131 | 6.488849e-49 | 3.153786e-46 |
| MsG0680035475.01 | MsG0780039527.01 | 0.808011 | 3.819118e-50 | 2.159238e-47 |
| MsG0480019350.01 | MsG0780039527.01 | 0.805005 | 1.644645e-49 | 8.604751e-47 |
| MsG0480019710.01 | MsG0780039527.01 | 0.819537 | 1.102294e-52 | 8.506405e-50 |
| MsG0480019922.01 | MsG0780039527.01 | 0.830550 | 2.757301e-55 | 2.914376e-52 |
| MsG0480020402.01 | MsG0780039527.01 | 0.817497 | 3.197984e-52 | 2.332766e-49 |
| MsG0480020495.01 | MsG0780039527.01 | 0.804715 | 1.890905e-49 | 9.819881e-47 |
| MsG0480020699.01 | MsG0780039527.01 | 0.804948 | 1.690618e-49 | 8.832797e-47 |
| MsG0480020739.01 | MsG0780039527.01 | 0.820070 | 8.329695e-53 | 6.524573e-50 |
| MsG0480020836.01 | MsG0780039527.01 | 0.830114 | 3.523041e-55 | 3.677263e-52 |
| MsG0480020839.01 | MsG0780039527.01 | 0.806109 | 9.647442e-50 | 5.192728e-47 |
| MsG0480020847.01 | MsG0780039527.01 | 0.804461 | 2.136270e-49 | 1.102106e-46 |
| MsG0480020909.01 | MsG0780039527.01 | 0.847040 | 1.486745e-59 | 2.609083e-56 |
| MsG0480021322.01 | MsG0780039527.01 | 0.803042 | 4.209468e-49 | 2.093918e-46 |
| MsG0480021452.01 | MsG0780039527.01 | 0.803922 | 2.765644e-49 | 1.407306e-46 |
| MsG0480021491.01 | MsG0780039527.01 | 0.809255 | 2.070912e-50 | 1.209987e-47 |
| MsG0480021501.01 | MsG0780039527.01 | 0.812068 | 5.104575e-51 | 3.213242e-48 |
| MsG0480022045.01 | MsG0780039527.01 | 0.826483 | 2.646348e-54 | 2.484862e-51 |
| MsG0480022164.01 | MsG0780039527.01 | 0.812384 | 4.356825e-51 | 2.766151e-48 |
| MsG0480022549.01 | MsG0780039527.01 | 0.843416 | 1.419930e-58 | 2.220256e-55 |
| MsG0480023163.01 | MsG0780039527.01 | 0.828913 | 6.901324e-55 | 6.954669e-52 |
| MsG0480023463.01 | MsG0780039527.01 | 0.851186 | 1.045370e-60 | 2.098771e-57 |
| MsG0480023636.01 | MsG0780039527.01 | 0.824867 | 6.394068e-54 | 5.734481e-51 |
| MsG0580024038.01 | MsG0780039527.01 | 0.818054 | 2.394654e-52 | 1.773539e-49 |
| MsG0580024165.01 | MsG0780039527.01 | 0.809784 | 1.594115e-50 | 9.446425e-48 |
| MsG0580024382.01 | MsG0780039527.01 | 0.810362 | 1.197064e-50 | 7.201207e-48 |
| MsG0580024489.01 | MsG0780039527.01 | 0.806885 | 6.619165e-50 | 3.634220e-47 |
| MsG0580024961.01 | MsG0780039527.01 | 0.808610 | 2.845431e-50 | 1.634186e-47 |
| MsG0580026081.01 | MsG0780039527.01 | 0.801414 | 9.107037e-49 | 4.346463e-46 |
| MsG0380015332.01 | MsG0780039527.01 | 0.814291 | 1.660683e-51 | 1.109886e-48 |
| MsG0380015555.01 | MsG0780039527.01 | 0.801918 | 7.178431e-49 | 3.470023e-46 |
| MsG0380015566.01 | MsG0780039527.01 | 0.819116 | 1.375411e-52 | 1.048998e-49 |
| MsG0380015677.01 | MsG0780039527.01 | 0.824317 | 8.617700e-54 | 7.606224e-51 |
| MsG0380015720.01 | MsG0780039527.01 | 0.818097 | 2.341859e-52 | 1.736427e-49 |
| MsG0380015808.01 | MsG0780039527.01 | 0.841193 | 5.513569e-58 | 8.039146e-55 |
| MsG0380016140.01 | MsG0780039527.01 | 0.821179 | 4.634175e-53 | 3.743220e-50 |
| MsG0380016517.01 | MsG0780039527.01 | 0.828204 | 1.023896e-54 | 1.010808e-51 |
| MsG0380016909.01 | MsG0780039527.01 | 0.834907 | 2.284937e-56 | 2.749933e-53 |
| MsG0380016910.01 | MsG0780039527.01 | 0.824171 | 9.326550e-54 | 8.198474e-51 |
| MsG0380016920.01 | MsG0780039527.01 | 0.843262 | 1.561379e-58 | 2.429407e-55 |
| MsG0380016970.01 | MsG0780039527.01 | 0.804002 | 2.662202e-49 | 1.357380e-46 |
| MsG0380016994.01 | MsG0780039527.01 | 0.816657 | 4.938856e-52 | 3.520765e-49 |
| MsG0380017061.01 | MsG0780039527.01 | 0.821345 | 4.242618e-53 | 3.442695e-50 |
| MsG0380017996.01 | MsG0780039527.01 | 0.809903 | 1.503126e-50 | 8.934692e-48 |
| MsG0380018005.01 | MsG0780039527.01 | 0.815393 | 9.462147e-52 | 6.515472e-49 |
| MsG0480018128.01 | MsG0780039527.01 | 0.818900 | 1.539600e-52 | 1.167324e-49 |
| MsG0480018163.01 | MsG0780039527.01 | 0.834713 | 2.556791e-56 | 3.058765e-53 |
| MsG0480018251.01 | MsG0780039527.01 | 0.811506 | 6.767152e-51 | 4.196572e-48 |
| MsG0580026089.01 | MsG0780039527.01 | 0.815858 | 7.450958e-52 | 5.196361e-49 |
| MsG0580027031.01 | MsG0780039527.01 | 0.821935 | 3.098083e-53 | 2.556090e-50 |
| MsG0580027431.01 | MsG0780039527.01 | 0.801740 | 7.806716e-49 | 3.756659e-46 |
| MsG0580029640.01 | MsG0780039527.01 | 0.807283 | 5.452331e-50 | 3.024704e-47 |
| MsG0280006712.01 | MsG0780039527.01 | 0.833216 | 6.057650e-56 | 6.930171e-53 |
| MsG0280007072.01 | MsG0780039527.01 | 0.802201 | 6.277193e-49 | 3.056226e-46 |
| MsG0280007164.01 | MsG0780039527.01 | 0.800488 | 1.407487e-48 | 6.562028e-46 |
| MsG0280007547.01 | MsG0780039527.01 | 0.814945 | 1.189618e-51 | 8.091840e-49 |
| MsG0280009514.01 | MsG0780039527.01 | 0.842359 | 2.713894e-58 | 4.104835e-55 |
| MsG0280009794.01 | MsG0780039527.01 | 0.833731 | 4.506167e-56 | 5.234945e-53 |
| MsG0280010015.01 | MsG0780039527.01 | 0.813656 | 2.292535e-51 | 1.505983e-48 |
| MsG0280010287.01 | MsG0780039527.01 | 0.814619 | 1.404711e-51 | 9.471613e-49 |
| MsG0280010489.01 | MsG0780039527.01 | 0.802962 | 4.374113e-49 | 2.171404e-46 |
| MsG0780035979.01 | MsG0780039527.01 | 0.806002 | 1.016101e-49 | 5.454490e-47 |
| MsG0780036477.01 | MsG0780039527.01 | 0.825943 | 3.558198e-54 | 3.290423e-51 |
| MsG0780036752.01 | MsG0780039527.01 | 0.815965 | 7.054029e-52 | 4.934153e-49 |
| MsG0780036815.01 | MsG0780039527.01 | 0.813602 | 2.356051e-51 | 1.545466e-48 |
| MsG0780037460.01 | MsG0780039527.01 | 0.803511 | 3.365868e-49 | 1.694694e-46 |
| MsG0780037604.01 | MsG0780039527.01 | 0.805168 | 1.520335e-49 | 7.987873e-47 |
| MsG0780038386.01 | MsG0780039527.01 | 0.824565 | 7.533855e-54 | 6.698240e-51 |
| MsG0780038401.01 | MsG0780039527.01 | 0.884221 | 2.308272e-71 | 1.510557e-67 |
| MsG0780038424.01 | MsG0780039527.01 | 0.812062 | 5.121279e-51 | 3.223130e-48 |
| MsG0780038439.01 | MsG0780039527.01 | 0.821789 | 3.350278e-53 | 2.752776e-50 |
| MsG0780039527.01 | MsG0780039655.01 | 0.804400 | 2.199876e-49 | 1.133114e-46 |
| MsG0780039527.01 | MsG0780039866.01 | 0.841356 | 4.993049e-58 | 7.317688e-55 |
| MsG0780039527.01 | MsG0780040057.01 | 0.843256 | 1.567429e-58 | 2.438279e-55 |
| MsG0780039527.01 | MsG0780040529.01 | 0.810316 | 1.224874e-50 | 7.359435e-48 |
| MsG0780039527.01 | MsG0780041305.01 | 0.801202 | 1.006224e-48 | 4.776881e-46 |
| MsG0780039527.01 | MsG0880041986.01 | 0.834496 | 2.897888e-56 | 3.445162e-53 |
| MsG0780039527.01 | MsG0880042836.01 | 0.800525 | 1.383764e-48 | 6.457231e-46 |
| MsG0780039527.01 | MsG0880043034.01 | 0.808195 | 3.488704e-50 | 1.982158e-47 |
| MsG0780039527.01 | MsG0880043309.01 | 0.803376 | 3.590465e-49 | 1.801363e-46 |
| MsG0780039527.01 | MsG0880043479.01 | 0.808473 | 3.044560e-50 | 1.742444e-47 |
| MsG0780039527.01 | MsG0880043614.01 | 0.848691 | 5.214659e-60 | 9.648965e-57 |
| MsG0780039527.01 | MsG0880044079.01 | 0.868607 | 5.758890e-66 | 2.096043e-62 |
| MsG0780039527.01 | MsG0880044080.01 | 0.844228 | 8.608335e-59 | 1.380668e-55 |
| MsG0780039527.01 | MsG0880044081.01 | 0.839628 | 1.413974e-57 | 1.964024e-54 |
| MsG0780039527.01 | MsG0880044085.01 | 0.831151 | 1.963350e-55 | 2.112514e-52 |
| MsG0780039527.01 | MsG0880044574.01 | 0.808055 | 3.737026e-50 | 2.115251e-47 |
| MsG0780039527.01 | MsG0880044782.01 | 0.825526 | 4.468791e-54 | 4.083260e-51 |
| MsG0780039527.01 | MsG0880045372.01 | 0.816124 | 6.499367e-52 | 4.565966e-49 |
| MsG0780039527.01 | MsG0880045453.01 | 0.806428 | 8.266529e-50 | 4.485742e-47 |
| MsG0780039527.01 | MsG0880045691.01 | 0.836156 | 1.103735e-56 | 1.379251e-53 |
| MsG0780039527.01 | MsG0880046012.01 | 0.825019 | 5.888349e-54 | 5.303902e-51 |
| MsG0780039527.01 | MsG0880046114.01 | 0.800108 | 1.682588e-48 | 7.769044e-46 |
| MsG0780039527.01 | MsG0880047647.01 | 0.813595 | 2.364140e-51 | 1.550534e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004877.01 | MsG0780039527.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039527.01.T01 | MTR_7g075090 | 99.088 | 329 | 3 | 0 | 17 | 345 | 32 | 360 | 0.0 | 682 |
| MsG0780039527.01.T01 | MTR_1g088775 | 95.441 | 329 | 15 | 0 | 17 | 345 | 32 | 360 | 0.0 | 664 |
| MsG0780039527.01.T01 | MTR_8g036040 | 66.967 | 333 | 109 | 1 | 18 | 349 | 24 | 356 | 2.67e-171 | 481 |
| MsG0780039527.01.T01 | MTR_8g036035 | 70.550 | 309 | 90 | 1 | 37 | 345 | 49 | 356 | 8.21e-161 | 455 |
| MsG0780039527.01.T01 | MTR_8g036020 | 69.281 | 306 | 93 | 1 | 40 | 345 | 18 | 322 | 1.02e-157 | 446 |
| MsG0780039527.01.T01 | MTR_8g036050 | 64.052 | 306 | 105 | 1 | 40 | 345 | 1 | 301 | 2.07e-144 | 411 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039527.01.T01 | AT2G45440 | 79.331 | 329 | 68 | 0 | 17 | 345 | 31 | 359 | 0.0 | 557 |
| MsG0780039527.01.T01 | AT3G60880 | 77.477 | 333 | 75 | 0 | 13 | 345 | 26 | 358 | 0.0 | 546 |
| MsG0780039527.01.T01 | AT3G60880 | 78.419 | 329 | 71 | 0 | 17 | 345 | 31 | 359 | 0.0 | 546 |
Find 101 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGGAATATTAAGGTTAT+TGG | 0.186837 | 7:-65290777 | MsG0780039527.01.T01:CDS |
| AAGGATAGAATTTGCCAATT+TGG | 0.190236 | 7:-65290181 | MsG0780039527.01.T01:CDS |
| ACCAATTTCCTTCACCAAAT+TGG | 0.224725 | 7:+65290167 | None:intergenic |
| GCCAATTTGGTGAAGGAAAT+TGG | 0.226319 | 7:-65290168 | MsG0780039527.01.T01:CDS |
| ATTAAGGTTATTGGAAATAC+TGG | 0.273517 | 7:-65290768 | MsG0780039527.01.T01:CDS |
| ATTCGGTGGTTAGTTGTTAT+TGG | 0.292413 | 7:-65290072 | MsG0780039527.01.T01:CDS |
| TGTTGCAAGCAATTTGATTC+CGG | 0.308700 | 7:-65290382 | MsG0780039527.01.T01:CDS |
| CATTATTCAGGAACTCTTCC+TGG | 0.320905 | 7:-65291601 | MsG0780039527.01.T01:intron |
| GCGCACACCGTCAATTGTTT+TGG | 0.326575 | 7:-65290798 | MsG0780039527.01.T01:CDS |
| AGCTGCTTGTGTAGGCTTCC+AGG | 0.338802 | 7:+65291583 | None:intergenic |
| CTTTCAAAGTGTGCTTTCCA+TGG | 0.342943 | 7:-65290625 | MsG0780039527.01.T01:CDS |
| GCCATTTGTACCTCTCCCTT+TGG | 0.355708 | 7:-65290208 | MsG0780039527.01.T01:CDS |
| CACGATGCTAGATGGGGTTA+TGG | 0.357163 | 7:-65290423 | MsG0780039527.01.T01:CDS |
| TACCTCTCCCTTTGGAGAAA+AGG | 0.366582 | 7:-65290200 | MsG0780039527.01.T01:CDS |
| GTGAAGGCCAACTAATGAAC+TGG | 0.368307 | 7:-65290842 | MsG0780039527.01.T01:CDS |
| GTTGCAAGCAATTTGATTCC+GGG | 0.368402 | 7:-65290381 | MsG0780039527.01.T01:CDS |
| TTAATGCGAGAGCTCATGTT+TGG | 0.368556 | 7:-65290357 | MsG0780039527.01.T01:CDS |
| GTGTTCAAACCAATGGGATT+TGG | 0.372649 | 7:+65290273 | None:intergenic |
| AGCTCTTGCCTTTGATTGAC+TGG | 0.378010 | 7:-65290308 | MsG0780039527.01.T01:CDS |
| CTTGGTTAGCGATATTAATT+CGG | 0.383028 | 7:-65290089 | MsG0780039527.01.T01:CDS |
| TAATGCGAGAGCTCATGTTT+GGG | 0.389995 | 7:-65290356 | MsG0780039527.01.T01:CDS |
| ACGATGCTAGATGGGGTTAT+GGG | 0.392947 | 7:-65290422 | MsG0780039527.01.T01:CDS |
| ATGAATGCCACGATGCTAGA+TGG | 0.396310 | 7:-65290431 | MsG0780039527.01.T01:CDS |
| TTGCTCAACTTGGAGTTGTC+AGG | 0.401383 | 7:-65290245 | MsG0780039527.01.T01:CDS |
| AACACGGCTCTTGCTCAACT+TGG | 0.407658 | 7:-65290255 | MsG0780039527.01.T01:CDS |
| GCTCTTCCCAGTTCATTAGT+TGG | 0.415200 | 7:+65290835 | None:intergenic |
| GGCTGGTGTCAAGGAATGTA+TGG | 0.417544 | 7:-65290514 | MsG0780039527.01.T01:CDS |
| TCATCTCATAACTACGCATT+GGG | 0.424346 | 7:+65291540 | None:intergenic |
| AGTTGCATGAATTGCTTCCC+TGG | 0.424932 | 7:+65290734 | None:intergenic |
| CTTCATATAAACCCTTACTA+TGG | 0.428403 | 7:-65290678 | MsG0780039527.01.T01:CDS |
| AGATGGGGTTATGGGGCTAC+TGG | 0.429920 | 7:-65290414 | MsG0780039527.01.T01:CDS |
| ACAAATGGCAGCCTGAAAAC+TGG | 0.430651 | 7:+65290222 | None:intergenic |
| TTTCAAAGTGTGCTTTCCAT+GGG | 0.432753 | 7:-65290624 | MsG0780039527.01.T01:CDS |
| GGAGTTGAAGGTGTTATTGT+TGG | 0.435948 | 7:-65290876 | MsG0780039527.01.T01:CDS |
| GTTATTGTTGGTGGCACAAC+TGG | 0.447799 | 7:-65290864 | MsG0780039527.01.T01:CDS |
| GCTCAAAGTACTTGCTTGGC+TGG | 0.459949 | 7:-65290531 | MsG0780039527.01.T01:CDS |
| TCATATATAATGTGCCTTCA+CGG | 0.466811 | 7:-65290593 | MsG0780039527.01.T01:CDS |
| AGCAATTCATGCAACTGAGC+AGG | 0.472668 | 7:-65290727 | MsG0780039527.01.T01:CDS |
| CTTAGCTCAAAGTACTTGCT+TGG | 0.473911 | 7:-65290535 | MsG0780039527.01.T01:CDS |
| TTCATCTCATAACTACGCAT+TGG | 0.474360 | 7:+65291539 | None:intergenic |
| ATTCCCACCAAAACAATTGA+CGG | 0.482266 | 7:+65290791 | None:intergenic |
| CAAAACCTCCTTGGAAGGTA+TGG | 0.482290 | 7:-65290655 | MsG0780039527.01.T01:CDS |
| GTTGAAGGTGTTATTGTTGG+TGG | 0.483414 | 7:-65290873 | MsG0780039527.01.T01:CDS |
| TCAAGATCAAATCGACCGTC+AGG | 0.487193 | 7:+65290936 | None:intergenic |
| TAGCGGGAAGGAGAAAGGTC+GGG | 0.487858 | 7:-65293414 | MsG0780039527.01.T01:CDS |
| TTACTATGGCAAAACCTCCT+TGG | 0.496884 | 7:-65290664 | MsG0780039527.01.T01:CDS |
| TATAATGTGCCTTCACGGAC+TGG | 0.501920 | 7:-65290588 | MsG0780039527.01.T01:CDS |
| GTGAATATGCAGATTGAGAA+TGG | 0.503509 | 7:-65290897 | MsG0780039527.01.T01:CDS |
| GATTTCACAGCTGCTTGTGT+AGG | 0.510543 | 7:+65291575 | None:intergenic |
| AACCAATGGGATTTGGCATG+TGG | 0.510972 | 7:+65290280 | None:intergenic |
| TACTTGCTTGGCTGGTGTCA+AGG | 0.511271 | 7:-65290523 | MsG0780039527.01.T01:CDS |
| AGGAATGTATGGGAAATGAC+AGG | 0.516838 | 7:-65290503 | MsG0780039527.01.T01:CDS |
| AGCGGGAAGGAGAAAGGTCG+GGG | 0.517847 | 7:-65293413 | MsG0780039527.01.T01:CDS |
| AAGAGCTTAGAATTCAATGT+AGG | 0.522936 | 7:+65290324 | None:intergenic |
| TGTTGGAACTGAAGACGTCC+AGG | 0.522988 | 7:-65290133 | MsG0780039527.01.T01:CDS |
| AAGAGCCGTGTTCAAACCAA+TGG | 0.526094 | 7:+65290266 | None:intergenic |
| TCCAAAGGGAGAGGTACAAA+TGG | 0.530348 | 7:+65290207 | None:intergenic |
| AGAATTTGCCAATTTGGTGA+AGG | 0.533742 | 7:-65290175 | MsG0780039527.01.T01:CDS |
| AATCGACCGTCAGGTAGGTA+TGG | 0.533788 | 7:+65290945 | None:intergenic |
| GGCACATTATATATGATTGT+GGG | 0.534618 | 7:+65290600 | None:intergenic |
| AGGCACATTATATATGATTG+TGG | 0.538234 | 7:+65290599 | None:intergenic |
| AATGCGAGAGCTCATGTTTG+GGG | 0.539435 | 7:-65290355 | MsG0780039527.01.T01:CDS |
| CAGATTGAGAATGGAGTTGA+AGG | 0.544549 | 7:-65290888 | MsG0780039527.01.T01:CDS |
| TTCCACATGCCAAATCCCAT+TGG | 0.545798 | 7:-65290282 | MsG0780039527.01.T01:CDS |
| TCTTGAATCATATGATGCCT+TGG | 0.551015 | 7:-65290919 | MsG0780039527.01.T01:CDS |
| TGAATGCCACGATGCTAGAT+GGG | 0.551513 | 7:-65290430 | MsG0780039527.01.T01:CDS |
| GCAATTCATGCAACTGAGCA+GGG | 0.554140 | 7:-65290726 | MsG0780039527.01.T01:CDS |
| AGTCGTCGTCATCAAGAACC+TGG | 0.556999 | 7:+65290115 | None:intergenic |
| TCTCAGACACTTTATGTCCT+CGG | 0.562351 | 7:+65290989 | None:intergenic |
| ATACTGGAAGCAACTCAACC+AGG | 0.563622 | 7:-65290752 | MsG0780039527.01.T01:CDS |
| ACGCATTGGGAGGTGAAAAG+TGG | 0.566127 | 7:+65291553 | None:intergenic |
| TATGGCAAAACCTCCTTGGA+AGG | 0.570023 | 7:-65290660 | MsG0780039527.01.T01:CDS |
| TGGAAAAGCCAGTCAATCAA+AGG | 0.572095 | 7:+65290300 | None:intergenic |
| AGAGCCGTGTTCAAACCAAT+GGG | 0.577523 | 7:+65290267 | None:intergenic |
| GGTTAGCGATATTAATTCGG+TGG | 0.582608 | 7:-65290086 | MsG0780039527.01.T01:CDS |
| ATGAGCTCTCGCATTAAACC+CGG | 0.593075 | 7:+65290363 | None:intergenic |
| ATAGAATTGCTGTGTGGAGT+GGG | 0.595797 | 7:-65290461 | MsG0780039527.01.T01:CDS |
| ATATATGATTGTGGGCCCCA+TGG | 0.599404 | 7:+65290608 | None:intergenic |
| TTAGCGGGAAGGAGAAAGGT+CGG | 0.603128 | 7:-65293415 | MsG0780039527.01.T01:CDS |
| GTGAGCAACCATACCTTCCA+AGG | 0.605193 | 7:+65290647 | None:intergenic |
| CGATGCTAGATGGGGTTATG+GGG | 0.609310 | 7:-65290421 | MsG0780039527.01.T01:CDS |
| TATTTACAGGACTTGTACCG+AGG | 0.611279 | 7:-65291006 | MsG0780039527.01.T01:intron |
| TTCAAAGTGTGCTTTCCATG+GGG | 0.611441 | 7:-65290623 | MsG0780039527.01.T01:CDS |
| AAGGATACAATAAGTCTACA+AGG | 0.613062 | 7:+65290041 | None:intergenic |
| ATGCGAGAGCTCATGTTTGG+GGG | 0.614814 | 7:-65290354 | MsG0780039527.01.T01:CDS |
| AAATCCCATTGGTTTGAACA+CGG | 0.620889 | 7:-65290271 | MsG0780039527.01.T01:CDS |
| TGAAGGCCAACTAATGAACT+GGG | 0.625991 | 7:-65290841 | MsG0780039527.01.T01:CDS |
| TACTGGAAGCAACTCAACCA+GGG | 0.628120 | 7:-65290751 | MsG0780039527.01.T01:CDS |
| AATAGAATTGCTGTGTGGAG+TGG | 0.632726 | 7:-65290462 | MsG0780039527.01.T01:CDS |
| CTCAATCTGCATATTCACCA+AGG | 0.638337 | 7:+65290902 | None:intergenic |
| GCTGGTGTCAAGGAATGTAT+GGG | 0.645660 | 7:-65290513 | MsG0780039527.01.T01:CDS |
| ATGTCTTGACCAGTCCGTGA+AGG | 0.650374 | 7:+65290579 | None:intergenic |
| GTTGGTGGCACAACTGGTGA+AGG | 0.654935 | 7:-65290858 | MsG0780039527.01.T01:CDS |
| GATCAAATCGACCGTCAGGT+AGG | 0.655832 | 7:+65290940 | None:intergenic |
| TCTCATAACTACGCATTGGG+AGG | 0.661369 | 7:+65291543 | None:intergenic |
| GGAATGTATGGGAAATGACA+GGG | 0.665453 | 7:-65290502 | MsG0780039527.01.T01:CDS |
| AAAACTCCATACCTACCTGA+CGG | 0.675250 | 7:-65290951 | MsG0780039527.01.T01:CDS |
| AGCAACCATACCTTCCAAGG+AGG | 0.704764 | 7:+65290650 | None:intergenic |
| GAATGCCACGATGCTAGATG+GGG | 0.719711 | 7:-65290429 | MsG0780039527.01.T01:CDS |
| CATAACCCCATCTAGCATCG+TGG | 0.731383 | 7:+65290424 | None:intergenic |
| CTGATAATAGAATTGCTGTG+TGG | 0.757477 | 7:-65290467 | MsG0780039527.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAATTAAGATTGTAA+GGG | - | Chr7:65291281-65291300 | MsG0780039527.01.T01:intron | 10.0% |
| !!! | TTTTTTCAATTAAGATAATA+GGG | - | Chr7:65290978-65290997 | MsG0780039527.01.T01:CDS | 10.0% |
| !!! | TTTTTTTAATTAAGATTGTA+AGG | - | Chr7:65291280-65291299 | MsG0780039527.01.T01:intron | 10.0% |
| !!! | TTTTTTTCAATTAAGATAAT+AGG | - | Chr7:65290977-65290996 | MsG0780039527.01.T01:CDS | 10.0% |
| !! | ACATTAAACAAACAAAAAAT+TGG | + | Chr7:65291694-65291713 | None:intergenic | 15.0% |
| !! | CTTCTTTCATTTATTTAATA+GGG | + | Chr7:65290315-65290334 | None:intergenic | 15.0% |
| !!! | ATATTTTGCAAAAATGATTT+TGG | - | Chr7:65290205-65290224 | MsG0780039527.01.T01:CDS | 15.0% |
| !!! | TTTTTCAATTAAGATAATAG+GGG | - | Chr7:65290979-65290998 | MsG0780039527.01.T01:CDS | 15.0% |
| !! | AAGCTATATATTGTATTTAC+AGG | - | Chr7:65292310-65292329 | MsG0780039527.01.T01:intron | 20.0% |
| !! | GCTTCTTTCATTTATTTAAT+AGG | + | Chr7:65290316-65290335 | None:intergenic | 20.0% |
| !! | TATGCTTTATATATATTGTG+TGG | - | Chr7:65291916-65291935 | MsG0780039527.01.T01:intron | 20.0% |
| !! | TGGAAAATATAGAATTTAGT+AGG | + | Chr7:65291866-65291885 | None:intergenic | 20.0% |
| !!! | TAAGGAGTATATTTAAAAAG+TGG | - | Chr7:65292201-65292220 | MsG0780039527.01.T01:intron | 20.0% |
| !!! | TTAATACTGATTTTGTGATA+CGG | + | Chr7:65292288-65292307 | None:intergenic | 20.0% |
| !!! | TTTACACATTGAACATATTT+TGG | - | Chr7:65292088-65292107 | MsG0780039527.01.T01:intron | 20.0% |
| ! | AAGACATGTTTATGTATGTT+TGG | + | Chr7:65291480-65291499 | None:intergenic | 25.0% |
| ! | AATCTCAAACTGAATAATAG+AGG | + | Chr7:65292123-65292142 | None:intergenic | 25.0% |
| ! | AATGAGACGATTAAAACAAA+TGG | + | Chr7:65291886-65291905 | None:intergenic | 25.0% |
| ! | ACAAAGGAAAAAAAACAGAA+AGG | + | Chr7:65293310-65293329 | None:intergenic | 25.0% |
| ! | AGTAGGAAAACTAATGAATT+TGG | + | Chr7:65291849-65291868 | None:intergenic | 25.0% |
| ! | ATTAAGGTTATTGGAAATAC+TGG | - | Chr7:65292561-65292580 | MsG0780039527.01.T01:intron | 25.0% |
| ! | CAAACAAAAAATTGGATTCA+TGG | + | Chr7:65291686-65291705 | None:intergenic | 25.0% |
| ! | GTAGTTATGAGATGAAAAAT+AGG | - | Chr7:65291797-65291816 | MsG0780039527.01.T01:intron | 25.0% |
| ! | TAAGCTTGTACAACTAAAAA+AGG | + | Chr7:65291429-65291448 | None:intergenic | 25.0% |
| ! | TTATGAGATGAAAAATAGGT+AGG | - | Chr7:65291801-65291820 | MsG0780039527.01.T01:intron | 25.0% |
| !! | ACAACTAAAAAAGGTTTGTT+TGG | + | Chr7:65291420-65291439 | None:intergenic | 25.0% |
| !! | GCTGATAATGATAAGTAAAA+TGG | + | Chr7:65290592-65290611 | None:intergenic | 25.0% |
| !! | TATTTTCTTTTTCTGCCATA+AGG | - | Chr7:65291581-65291600 | MsG0780039527.01.T01:CDS | 25.0% |
| !!! | GAATTTCTTTTGTTGTTCAT+CGG | - | Chr7:65290787-65290806 | MsG0780039527.01.T01:CDS | 25.0% |
| !!! | TAATACTGATTTTGTGATAC+GGG | + | Chr7:65292287-65292306 | None:intergenic | 25.0% |
| !!! | TGCGTTGATTTGTTAAAAAT+TGG | - | Chr7:65290740-65290759 | MsG0780039527.01.T01:CDS | 25.0% |
| !!! | TGTCTTTTTAAGTTTCACAA+AGG | + | Chr7:65293326-65293345 | None:intergenic | 25.0% |
| !!! | TTTAATCGTCTCATTTTTTC+AGG | - | Chr7:65291891-65291910 | MsG0780039527.01.T01:intron | 25.0% |
| AAGAGCTTAGAATTCAATGT+AGG | + | Chr7:65293008-65293027 | None:intergenic | 30.0% | |
| AAGGACTAAATTGATGGAAA+CGG | + | Chr7:65290053-65290072 | None:intergenic | 30.0% | |
| AAGGATACAATAAGTCTACA+AGG | + | Chr7:65293291-65293310 | None:intergenic | 30.0% | |
| AAGGATAGAATTTGCCAATT+TGG | - | Chr7:65293148-65293167 | MsG0780039527.01.T01:intron | 30.0% | |
| AATGATGACACAACATATTG+GGG | + | Chr7:65291551-65291570 | None:intergenic | 30.0% | |
| AATGGAAAATTTGAACCTAG+TGG | + | Chr7:65290574-65290593 | None:intergenic | 30.0% | |
| AGGCACATTATATATGATTG+TGG | + | Chr7:65292733-65292752 | None:intergenic | 30.0% | |
| ATACACTTGTGAGAAAATGA+TGG | - | Chr7:65291064-65291083 | MsG0780039527.01.T01:intron | 30.0% | |
| ATAGAGGAGATTTAGACAAT+AGG | - | Chr7:65292055-65292074 | MsG0780039527.01.T01:intron | 30.0% | |
| ATGATAAGCTATGAGTTACT+TGG | - | Chr7:65291019-65291038 | MsG0780039527.01.T01:intron | 30.0% | |
| ATGTCTTATACTGTGTAGAT+TGG | - | Chr7:65291941-65291960 | MsG0780039527.01.T01:intron | 30.0% | |
| CAATGATGACACAACATATT+GGG | + | Chr7:65291552-65291571 | None:intergenic | 30.0% | |
| CTTCATATAAACCCTTACTA+TGG | - | Chr7:65292651-65292670 | MsG0780039527.01.T01:intron | 30.0% | |
| CTTGGTTAGCGATATTAATT+CGG | - | Chr7:65293240-65293259 | MsG0780039527.01.T01:intron | 30.0% | |
| GGCACATTATATATGATTGT+GGG | + | Chr7:65292732-65292751 | None:intergenic | 30.0% | |
| GTAGTGCTTTGTAAAATTAG+CGG | - | Chr7:65291199-65291218 | MsG0780039527.01.T01:intron | 30.0% | |
| TAGAAGTAGAAGAACGTAAA+CGG | + | Chr7:65290454-65290473 | None:intergenic | 30.0% | |
| TATTGTCTAAATCTCCTCTA+TGG | + | Chr7:65292056-65292075 | None:intergenic | 30.0% | |
| TCAATGATGACACAACATAT+TGG | + | Chr7:65291553-65291572 | None:intergenic | 30.0% | |
| TCATATATAATGTGCCTTCA+CGG | - | Chr7:65292736-65292755 | MsG0780039527.01.T01:intron | 30.0% | |
| TCGAATTTCGCAATTAGTAA+AGG | + | Chr7:65290767-65290786 | None:intergenic | 30.0% | |
| TCTTTATGAACATTGTCGAT+GGG | - | Chr7:65290697-65290716 | MsG0780039527.01.T01:CDS | 30.0% | |
| TGAGAAAATGATGGTTACTA+AGG | - | Chr7:65291073-65291092 | MsG0780039527.01.T01:intron | 30.0% | |
| TGGAAGATAAGGATAAAACA+GGG | - | Chr7:65289972-65289991 | MsG0780039527.01.T01:three_prime_UTR | 30.0% | |
| TTCTTTATGAACATTGTCGA+TGG | - | Chr7:65290696-65290715 | MsG0780039527.01.T01:CDS | 30.0% | |
| TTTACGTTCTTCTACTTCTA+GGG | - | Chr7:65290454-65290473 | MsG0780039527.01.T01:CDS | 30.0% | |
| ! | AATTCTATCCTTTTCTCCAA+AGG | + | Chr7:65293140-65293159 | None:intergenic | 30.0% |
| ! | ATAAGCTAGCTTATAGAAGA+TGG | - | Chr7:65291126-65291145 | MsG0780039527.01.T01:intron | 30.0% |
| ! | ATTCTATCCTTTTCTCCAAA+GGG | + | Chr7:65293139-65293158 | None:intergenic | 30.0% |
| ! | CTGATTGAATTTTCAGTGTT+TGG | - | Chr7:65290888-65290907 | MsG0780039527.01.T01:CDS | 30.0% |
| !! | AGCTAGTTTATAGTTGATAG+CGG | - | Chr7:65291155-65291174 | MsG0780039527.01.T01:intron | 30.0% |
| !! | ATGAAGAGTTGTTTTCATTG+TGG | + | Chr7:65290406-65290425 | None:intergenic | 30.0% |
| !!! | ACTTCTAGGGTTTTGATTTA+TGG | - | Chr7:65290467-65290486 | MsG0780039527.01.T01:CDS | 30.0% |
| !!! | TTGTTTTGGTGGGAATATTA+AGG | - | Chr7:65292545-65292564 | MsG0780039527.01.T01:intron | 30.0% |
| AACGTTTGTCTGCATTATTC+AGG | - | Chr7:65291716-65291735 | MsG0780039527.01.T01:intron | 35.0% | |
| ACCAATTTCCTTCACCAAAT+TGG | + | Chr7:65293165-65293184 | None:intergenic | 35.0% | |
| ATACTCCTTAAAACATGCAG+TGG | + | Chr7:65292191-65292210 | None:intergenic | 35.0% | |
| ATTCCCACCAAAACAATTGA+CGG | + | Chr7:65292541-65292560 | None:intergenic | 35.0% | |
| CTGATAATAGAATTGCTGTG+TGG | - | Chr7:65292862-65292881 | MsG0780039527.01.T01:intron | 35.0% | |
| CTTATACTGTGTAGATTGGA+GGG | - | Chr7:65291945-65291964 | MsG0780039527.01.T01:intron | 35.0% | |
| CTTTATGAACATTGTCGATG+GGG | - | Chr7:65290698-65290717 | MsG0780039527.01.T01:CDS | 35.0% | |
| GAAGACTAATGTGCGATTTA+TGG | + | Chr7:65290379-65290398 | None:intergenic | 35.0% | |
| GCTCTCTAACATAAACCTTA+TGG | + | Chr7:65291599-65291618 | None:intergenic | 35.0% | |
| GGAAGATAAGGATAAAACAG+GGG | - | Chr7:65289973-65289992 | MsG0780039527.01.T01:three_prime_UTR | 35.0% | |
| GGATAAAACAGGGGTAAAAA+TGG | - | Chr7:65289982-65290001 | MsG0780039527.01.T01:three_prime_UTR | 35.0% | |
| GGTGGGAATATTAAGGTTAT+TGG | - | Chr7:65292552-65292571 | MsG0780039527.01.T01:intron | 35.0% | |
| GTCTGTTAGTGATGTTAAGT+TGG | + | Chr7:65290130-65290149 | None:intergenic | 35.0% | |
| GTGAATATGCAGATTGAGAA+TGG | - | Chr7:65292432-65292451 | MsG0780039527.01.T01:intron | 35.0% | |
| GTGGAAGATAAGGATAAAAC+AGG | - | Chr7:65289971-65289990 | MsG0780039527.01.T01:three_prime_UTR | 35.0% | |
| GTGTACAAGGACTAAATTGA+TGG | + | Chr7:65290059-65290078 | None:intergenic | 35.0% | |
| GTTTACGTTCTTCTACTTCT+AGG | - | Chr7:65290453-65290472 | MsG0780039527.01.T01:CDS | 35.0% | |
| TCATCTCATAACTACGCATT+GGG | + | Chr7:65291792-65291811 | None:intergenic | 35.0% | |
| TCTTATACTGTGTAGATTGG+AGG | - | Chr7:65291944-65291963 | MsG0780039527.01.T01:intron | 35.0% | |
| TCTTGAATCATATGATGCCT+TGG | - | Chr7:65292410-65292429 | MsG0780039527.01.T01:intron | 35.0% | |
| TGTTGCAAGCAATTTGATTC+CGG | - | Chr7:65292947-65292966 | MsG0780039527.01.T01:intron | 35.0% | |
| TTATGGTCTCAGAAATGTGA+GGG | + | Chr7:65290362-65290381 | None:intergenic | 35.0% | |
| TTCATCTCATAACTACGCAT+TGG | + | Chr7:65291793-65291812 | None:intergenic | 35.0% | |
| TTTATGGTCTCAGAAATGTG+AGG | + | Chr7:65290363-65290382 | None:intergenic | 35.0% | |
| TTTCAAAGTGTGCTTTCCAT+GGG | - | Chr7:65292705-65292724 | MsG0780039527.01.T01:intron | 35.0% | |
| ! | AACATCACTAACAGACCTTT+TGG | - | Chr7:65290134-65290153 | MsG0780039527.01.T01:CDS | 35.0% |
| ! | AGAATTTGCCAATTTGGTGA+AGG | - | Chr7:65293154-65293173 | MsG0780039527.01.T01:intron | 35.0% |
| ! | ATTCGGTGGTTAGTTGTTAT+TGG | - | Chr7:65293257-65293276 | MsG0780039527.01.T01:intron | 35.0% |
| !! | AAATCCCATTGGTTTGAACA+CGG | - | Chr7:65293058-65293077 | MsG0780039527.01.T01:intron | 35.0% |
| !! | ACGAAGTTGATATTCACTCA+AGG | - | Chr7:65290248-65290267 | MsG0780039527.01.T01:CDS | 35.0% |
| !! | AGGTAGGTATGGAGTTTTAA+TGG | + | Chr7:65292376-65292395 | None:intergenic | 35.0% |
| !!! | AAGTTTTGAATCACATGTGG+AGG | + | Chr7:65292777-65292796 | None:intergenic | 35.0% |
| !!! | GCTAAGTTTTGAATCACATG+TGG | + | Chr7:65292780-65292799 | None:intergenic | 35.0% |
| !!! | TTCATCGGTTTTGTGGTAAA+TGG | - | Chr7:65290802-65290821 | MsG0780039527.01.T01:CDS | 35.0% |
| !!! | TTTGTTGTTCATCGGTTTTG+TGG | - | Chr7:65290795-65290814 | MsG0780039527.01.T01:CDS | 35.0% |
| AAAACTCCATACCTACCTGA+CGG | - | Chr7:65292378-65292397 | MsG0780039527.01.T01:intron | 40.0% | |
| AAAGTGGTCTCATGTGTTTC+TGG | - | Chr7:65292217-65292236 | MsG0780039527.01.T01:intron | 40.0% | |
| AAATCTGAGGGTGGAAGATA+AGG | - | Chr7:65289961-65289980 | MsG0780039527.01.T01:three_prime_UTR | 40.0% | |
| AACTGTAGAATGCATGCTCT+GGG | - | Chr7:65291975-65291994 | MsG0780039527.01.T01:intron | 40.0% | |
| AATAGAATTGCTGTGTGGAG+TGG | - | Chr7:65292867-65292886 | MsG0780039527.01.T01:intron | 40.0% | |
| ACAAGACAACACAACATGCA+GGG | - | Chr7:65290102-65290121 | MsG0780039527.01.T01:CDS | 40.0% | |
| AGGAATGTATGGGAAATGAC+AGG | - | Chr7:65292826-65292845 | MsG0780039527.01.T01:intron | 40.0% | |
| ATAGAATTGCTGTGTGGAGT+GGG | - | Chr7:65292868-65292887 | MsG0780039527.01.T01:intron | 40.0% | |
| ATGGGTATGACTGAAATCTG+AGG | - | Chr7:65289948-65289967 | MsG0780039527.01.T01:three_prime_UTR | 40.0% | |
| ATGGTGATCTACTAGAGTGA+AGG | - | Chr7:65290821-65290840 | MsG0780039527.01.T01:CDS | 40.0% | |
| CAATTTAGTCCTTGTACACG+TGG | - | Chr7:65290060-65290079 | MsG0780039527.01.T01:CDS | 40.0% | |
| CAGATTGAGAATGGAGTTGA+AGG | - | Chr7:65292441-65292460 | MsG0780039527.01.T01:intron | 40.0% | |
| CATTATTCAGGAACTCTTCC+TGG | - | Chr7:65291728-65291747 | MsG0780039527.01.T01:intron | 40.0% | |
| CTCAATCTGCATATTCACCA+AGG | + | Chr7:65292430-65292449 | None:intergenic | 40.0% | |
| CTTTCAAAGTGTGCTTTCCA+TGG | - | Chr7:65292704-65292723 | MsG0780039527.01.T01:intron | 40.0% | |
| GATCTGTGATGAAACCATAG+AGG | - | Chr7:65292039-65292058 | MsG0780039527.01.T01:intron | 40.0% | |
| GCTACATTCAAGACCTATAC+TGG | - | Chr7:65290489-65290508 | MsG0780039527.01.T01:CDS | 40.0% | |
| GGAATGTATGGGAAATGACA+GGG | - | Chr7:65292827-65292846 | MsG0780039527.01.T01:intron | 40.0% | |
| GGTTAGCGATATTAATTCGG+TGG | - | Chr7:65293243-65293262 | MsG0780039527.01.T01:intron | 40.0% | |
| GTAACATTGGAAGGATGAAG+CGG | + | Chr7:65290540-65290559 | None:intergenic | 40.0% | |
| GTCTTGTACACGTGTCAAAA+AGG | + | Chr7:65290089-65290108 | None:intergenic | 40.0% | |
| GTGTTCAAACCAATGGGATT+TGG | + | Chr7:65293059-65293078 | None:intergenic | 40.0% | |
| GTTGCAAGCAATTTGATTCC+GGG | - | Chr7:65292948-65292967 | MsG0780039527.01.T01:intron | 40.0% | |
| TAATGCGAGAGCTCATGTTT+GGG | - | Chr7:65292973-65292992 | MsG0780039527.01.T01:intron | 40.0% | |
| TACAAGACAACACAACATGC+AGG | - | Chr7:65290101-65290120 | MsG0780039527.01.T01:CDS | 40.0% | |
| TATTTACAGGACTTGTACCG+AGG | - | Chr7:65292323-65292342 | MsG0780039527.01.T01:intron | 40.0% | |
| TCGTACATGAAGACAGATAC+AGG | + | Chr7:65291621-65291640 | None:intergenic | 40.0% | |
| TCTCAGACACTTTATGTCCT+CGG | + | Chr7:65292343-65292362 | None:intergenic | 40.0% | |
| TGAAGGCCAACTAATGAACT+GGG | - | Chr7:65292488-65292507 | MsG0780039527.01.T01:intron | 40.0% | |
| TGGAAAAGCCAGTCAATCAA+AGG | + | Chr7:65293032-65293051 | None:intergenic | 40.0% | |
| TGGGTATGACTGAAATCTGA+GGG | - | Chr7:65289949-65289968 | MsG0780039527.01.T01:three_prime_UTR | 40.0% | |
| TGTATCTGTCTTCATGTACG+AGG | - | Chr7:65291620-65291639 | MsG0780039527.01.T01:intron | 40.0% | |
| TTAATGCGAGAGCTCATGTT+TGG | - | Chr7:65292972-65292991 | MsG0780039527.01.T01:intron | 40.0% | |
| TTACCACTGACAAAACCACT+AGG | - | Chr7:65290556-65290575 | MsG0780039527.01.T01:CDS | 40.0% | |
| TTACTATGGCAAAACCTCCT+TGG | - | Chr7:65292665-65292684 | MsG0780039527.01.T01:intron | 40.0% | |
| TTCAAAGTGTGCTTTCCATG+GGG | - | Chr7:65292706-65292725 | MsG0780039527.01.T01:intron | 40.0% | |
| TTCTCTCACGTCCATCAAAA+TGG | + | Chr7:65290169-65290188 | None:intergenic | 40.0% | |
| TTGTCAGTGGTAACATTGGA+AGG | + | Chr7:65290549-65290568 | None:intergenic | 40.0% | |
| ! | AAGGAGGTTTTGCCATAGTA+AGG | + | Chr7:65292666-65292685 | None:intergenic | 40.0% |
| ! | AGGAGGTTTTGCCATAGTAA+GGG | + | Chr7:65292665-65292684 | None:intergenic | 40.0% |
| ! | ATTGGTCGACAGCATTTTGT+TGG | - | Chr7:65293179-65293198 | MsG0780039527.01.T01:intron | 40.0% |
| ! | CTGTACCACTGCATGTTTTA+AGG | - | Chr7:65292183-65292202 | MsG0780039527.01.T01:intron | 40.0% |
| ! | CTTAGCTCAAAGTACTTGCT+TGG | - | Chr7:65292794-65292813 | MsG0780039527.01.T01:intron | 40.0% |
| ! | GCCAATTTGGTGAAGGAAAT+TGG | - | Chr7:65293161-65293180 | MsG0780039527.01.T01:intron | 40.0% |
| ! | TCACTAACAGACCTTTTGGA+CGG | - | Chr7:65290138-65290157 | MsG0780039527.01.T01:CDS | 40.0% |
| ! | TGATGGACGTGAGAGAAATT+CGG | - | Chr7:65290172-65290191 | MsG0780039527.01.T01:CDS | 40.0% |
| !! | GGAGTTGAAGGTGTTATTGT+TGG | - | Chr7:65292453-65292472 | MsG0780039527.01.T01:intron | 40.0% |
| !! | GGTTTTGTCAGTGGTAACAT+TGG | + | Chr7:65290553-65290572 | None:intergenic | 40.0% |
| !! | GTTGAAGGTGTTATTGTTGG+TGG | - | Chr7:65292456-65292475 | MsG0780039527.01.T01:intron | 40.0% |
| !!! | ACACCGTCAATTGTTTTGGT+GGG | - | Chr7:65292535-65292554 | MsG0780039527.01.T01:intron | 40.0% |
| !!! | TTGATGACGACGACTTTTCT+TGG | - | Chr7:65293222-65293241 | MsG0780039527.01.T01:intron | 40.0% |
| AAAAGGAAGCCACGTGTACA+AGG | + | Chr7:65290072-65290091 | None:intergenic | 45.0% | |
| AACCAATGGGATTTGGCATG+TGG | + | Chr7:65293052-65293071 | None:intergenic | 45.0% | |
| AAGAGCCGTGTTCAAACCAA+TGG | + | Chr7:65293066-65293085 | None:intergenic | 45.0% | |
| AATGCGAGAGCTCATGTTTG+GGG | - | Chr7:65292974-65292993 | MsG0780039527.01.T01:intron | 45.0% | |
| ACAAATGGCAGCCTGAAAAC+TGG | + | Chr7:65293110-65293129 | None:intergenic | 45.0% | |
| ACGATGCTAGATGGGGTTAT+GGG | - | Chr7:65292907-65292926 | MsG0780039527.01.T01:intron | 45.0% | |
| AGAGCCGTGTTCAAACCAAT+GGG | + | Chr7:65293065-65293084 | None:intergenic | 45.0% | |
| AGCAATTCATGCAACTGAGC+AGG | - | Chr7:65292602-65292621 | MsG0780039527.01.T01:intron | 45.0% | |
| AGCTCTTGCCTTTGATTGAC+TGG | - | Chr7:65293021-65293040 | MsG0780039527.01.T01:intron | 45.0% | |
| AGTTGCATGAATTGCTTCCC+TGG | + | Chr7:65292598-65292617 | None:intergenic | 45.0% | |
| ATACTGGAAGCAACTCAACC+AGG | - | Chr7:65292577-65292596 | MsG0780039527.01.T01:intron | 45.0% | |
| ATATATGATTGTGGGCCCCA+TGG | + | Chr7:65292724-65292743 | None:intergenic | 45.0% | |
| ATGAATGCCACGATGCTAGA+TGG | - | Chr7:65292898-65292917 | MsG0780039527.01.T01:intron | 45.0% | |
| ATGAGCTCTCGCATTAAACC+CGG | + | Chr7:65292969-65292988 | None:intergenic | 45.0% | |
| CAAAACCTCCTTGGAAGGTA+TGG | - | Chr7:65292674-65292693 | MsG0780039527.01.T01:intron | 45.0% | |
| CACAACATATTGGGGCTCTT+CGG | + | Chr7:65291543-65291562 | None:intergenic | 45.0% | |
| GAACTGTAGAATGCATGCTC+TGG | - | Chr7:65291974-65291993 | MsG0780039527.01.T01:intron | 45.0% | |
| GATGGACGTGAGAGAAATTC+GGG | - | Chr7:65290173-65290192 | MsG0780039527.01.T01:CDS | 45.0% | |
| GATTTCACAGCTGCTTGTGT+AGG | + | Chr7:65291757-65291776 | None:intergenic | 45.0% | |
| GCAATTCATGCAACTGAGCA+GGG | - | Chr7:65292603-65292622 | MsG0780039527.01.T01:intron | 45.0% | |
| GCTCTTCCCAGTTCATTAGT+TGG | + | Chr7:65292497-65292516 | None:intergenic | 45.0% | |
| GTATGACTGAAATCTGAGGG+TGG | - | Chr7:65289952-65289971 | MsG0780039527.01.T01:three_prime_UTR | 45.0% | |
| GTGAAGGCCAACTAATGAAC+TGG | - | Chr7:65292487-65292506 | MsG0780039527.01.T01:intron | 45.0% | |
| TACTGGAAGCAACTCAACCA+GGG | - | Chr7:65292578-65292597 | MsG0780039527.01.T01:intron | 45.0% | |
| TATAATGTGCCTTCACGGAC+TGG | - | Chr7:65292741-65292760 | MsG0780039527.01.T01:intron | 45.0% | |
| TATACTGGCGTATGCTTCAC+AGG | - | Chr7:65290504-65290523 | MsG0780039527.01.T01:CDS | 45.0% | |
| TATGGCAAAACCTCCTTGGA+AGG | - | Chr7:65292669-65292688 | MsG0780039527.01.T01:intron | 45.0% | |
| TCAAGATCAAATCGACCGTC+AGG | + | Chr7:65292396-65292415 | None:intergenic | 45.0% | |
| TCTACTAGAGTGAAGGACTC+TGG | - | Chr7:65290828-65290847 | MsG0780039527.01.T01:CDS | 45.0% | |
| TCTCATAACTACGCATTGGG+AGG | + | Chr7:65291789-65291808 | None:intergenic | 45.0% | |
| TGAATGCCACGATGCTAGAT+GGG | - | Chr7:65292899-65292918 | MsG0780039527.01.T01:intron | 45.0% | |
| TGTGAAGCATACGCCAGTAT+AGG | + | Chr7:65290505-65290524 | None:intergenic | 45.0% | |
| TTCCACATGCCAAATCCCAT+TGG | - | Chr7:65293047-65293066 | MsG0780039527.01.T01:intron | 45.0% | |
| TTGCTCAACTTGGAGTTGTC+AGG | - | Chr7:65293084-65293103 | MsG0780039527.01.T01:intron | 45.0% | |
| TTGGCTGATGCTTGCAATTC+AGG | - | Chr7:65290224-65290243 | MsG0780039527.01.T01:CDS | 45.0% | |
| ! | ATCCTTTTCTCCAAAGGGAG+AGG | + | Chr7:65293134-65293153 | None:intergenic | 45.0% |
| ! | GCTGGTGTCAAGGAATGTAT+GGG | - | Chr7:65292816-65292835 | MsG0780039527.01.T01:intron | 45.0% |
| ! | TAACAGACCTTTTGGACGGA+GGG | - | Chr7:65290142-65290161 | MsG0780039527.01.T01:CDS | 45.0% |
| ! | TACCTCTCCCTTTGGAGAAA+AGG | - | Chr7:65293129-65293148 | MsG0780039527.01.T01:intron | 45.0% |
| ! | TCCAAAGGGAGAGGTACAAA+TGG | + | Chr7:65293125-65293144 | None:intergenic | 45.0% |
| !! | CTCATGTGTTTCTGGCATCA+TGG | - | Chr7:65292225-65292244 | MsG0780039527.01.T01:intron | 45.0% |
| !! | GTTATTGTTGGTGGCACAAC+TGG | - | Chr7:65292465-65292484 | MsG0780039527.01.T01:intron | 45.0% |
| !!! | CACACCGTCAATTGTTTTGG+TGG | - | Chr7:65292534-65292553 | MsG0780039527.01.T01:intron | 45.0% |
| !!! | GAACCTAGTGGTTTTGTCAG+TGG | + | Chr7:65290562-65290581 | None:intergenic | 45.0% |
| AAATGGTCCCTCCGTCCAAA+AGG | + | Chr7:65290152-65290171 | None:intergenic | 50.0% | |
| AACACGGCTCTTGCTCAACT+TGG | - | Chr7:65293074-65293093 | MsG0780039527.01.T01:intron | 50.0% | |
| AATCGACCGTCAGGTAGGTA+TGG | + | Chr7:65292387-65292406 | None:intergenic | 50.0% | |
| ACGCATTGGGAGGTGAAAAG+TGG | + | Chr7:65291779-65291798 | None:intergenic | 50.0% | |
| AGCAACCATACCTTCCAAGG+AGG | + | Chr7:65292682-65292701 | None:intergenic | 50.0% | |
| AGTCGTCGTCATCAAGAACC+TGG | + | Chr7:65293217-65293236 | None:intergenic | 50.0% | |
| ATGCGAGAGCTCATGTTTGG+GGG | - | Chr7:65292975-65292994 | MsG0780039527.01.T01:intron | 50.0% | |
| ATGTCTTGACCAGTCCGTGA+AGG | + | Chr7:65292753-65292772 | None:intergenic | 50.0% | |
| CACGATGCTAGATGGGGTTA+TGG | - | Chr7:65292906-65292925 | MsG0780039527.01.T01:intron | 50.0% | |
| CATAACCCCATCTAGCATCG+TGG | + | Chr7:65292908-65292927 | None:intergenic | 50.0% | |
| CGATGCTAGATGGGGTTATG+GGG | - | Chr7:65292908-65292927 | MsG0780039527.01.T01:intron | 50.0% | |
| GAATGCCACGATGCTAGATG+GGG | - | Chr7:65292900-65292919 | MsG0780039527.01.T01:intron | 50.0% | |
| GATCAAATCGACCGTCAGGT+AGG | + | Chr7:65292392-65292411 | None:intergenic | 50.0% | |
| GCCATTTGTACCTCTCCCTT+TGG | - | Chr7:65293121-65293140 | MsG0780039527.01.T01:intron | 50.0% | |
| GGAAGGATGAAGCGGAAAAG+CGG | + | Chr7:65290532-65290551 | None:intergenic | 50.0% | |
| GTGAGCAACCATACCTTCCA+AGG | + | Chr7:65292685-65292704 | None:intergenic | 50.0% | |
| TGGTCTCAGAAATGTGAGGG+CGG | + | Chr7:65290359-65290378 | None:intergenic | 50.0% | |
| TGTTGGAACTGAAGACGTCC+AGG | - | Chr7:65293196-65293215 | MsG0780039527.01.T01:intron | 50.0% | |
| TTAGCGGGAAGGAGAAAGGT+CGG | - | Chr7:65289914-65289933 | MsG0780039527.01.T01:three_prime_UTR | 50.0% | |
| ! | AGAAGCACGTACAGTTGTCC+TGG | - | Chr7:65290330-65290349 | MsG0780039527.01.T01:CDS | 50.0% |
| ! | CATGCTCTGGGTAGGATTTC+TGG | - | Chr7:65291987-65292006 | MsG0780039527.01.T01:intron | 50.0% |
| ! | CTAACAGACCTTTTGGACGG+AGG | - | Chr7:65290141-65290160 | MsG0780039527.01.T01:CDS | 50.0% |
| ! | GAGTTGTCAGGCCAGTTTTC+AGG | - | Chr7:65293096-65293115 | MsG0780039527.01.T01:intron | 50.0% |
| ! | GCGCACACCGTCAATTGTTT+TGG | - | Chr7:65292531-65292550 | MsG0780039527.01.T01:intron | 50.0% |
| ! | GCTCAAAGTACTTGCTTGGC+TGG | - | Chr7:65292798-65292817 | MsG0780039527.01.T01:intron | 50.0% |
| ! | GGCTGGTGTCAAGGAATGTA+TGG | - | Chr7:65292815-65292834 | MsG0780039527.01.T01:intron | 50.0% |
| ! | GGTTTTGCGGTTGGAATGCA+TGG | - | Chr7:65292624-65292643 | MsG0780039527.01.T01:intron | 50.0% |
| ! | GTAGAATGCATGCTCTGGGT+AGG | - | Chr7:65291979-65291998 | MsG0780039527.01.T01:intron | 50.0% |
| ! | TACTTGCTTGGCTGGTGTCA+AGG | - | Chr7:65292806-65292825 | MsG0780039527.01.T01:intron | 50.0% |
| ! | TGCAACTGAGCAGGGTTTTG+CGG | - | Chr7:65292611-65292630 | MsG0780039527.01.T01:intron | 50.0% |
| !! | AAGGTCGGGGACTGTTTTGA+TGG | - | Chr7:65289929-65289948 | MsG0780039527.01.T01:three_prime_UTR | 50.0% |
| !! | GGTTTTAGCGGGAAGGAGAA+AGG | - | Chr7:65289910-65289929 | MsG0780039527.01.T01:three_prime_UTR | 50.0% |
| !!! | AGGTCGGGGACTGTTTTGAT+GGG | - | Chr7:65289930-65289949 | MsG0780039527.01.T01:three_prime_UTR | 50.0% |
| AGATGGGGTTATGGGGCTAC+TGG | - | Chr7:65292915-65292934 | MsG0780039527.01.T01:intron | 55.0% | |
| AGCTGCTTGTGTAGGCTTCC+AGG | + | Chr7:65291749-65291768 | None:intergenic | 55.0% | |
| TAGCGGGAAGGAGAAAGGTC+GGG | - | Chr7:65289915-65289934 | MsG0780039527.01.T01:three_prime_UTR | 55.0% | |
| ! | ACTGAGCAGGGTTTTGCGGT+TGG | - | Chr7:65292615-65292634 | MsG0780039527.01.T01:intron | 55.0% |
| ! | GGACGGAGGGACCATTTTGA+TGG | - | Chr7:65290155-65290174 | MsG0780039527.01.T01:CDS | 55.0% |
| !! | GTTGGTGGCACAACTGGTGA+AGG | - | Chr7:65292471-65292490 | MsG0780039527.01.T01:intron | 55.0% |
| AGCGGGAAGGAGAAAGGTCG+GGG | - | Chr7:65289916-65289935 | MsG0780039527.01.T01:three_prime_UTR | 60.0% | |
| GAAATGTGAGGGCGGCTGCC+AGG | + | Chr7:65290351-65290370 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 65289905 | 65293446 | 65289905 | ID=MsG0780039527.01;Name=MsG0780039527.01 |
| Chr7 | mRNA | 65289905 | 65293446 | 65289905 | ID=MsG0780039527.01.T01;Parent=MsG0780039527.01;Name=MsG0780039527.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.5|0.66|0.66|1|1|3|151|363 |
| Chr7 | exon | 65289905 | 65291019 | 65289905 | ID=MsG0780039527.01.T01:exon:10330;Parent=MsG0780039527.01.T01 |
| Chr7 | exon | 65291533 | 65291613 | 65291533 | ID=MsG0780039527.01.T01:exon:10329;Parent=MsG0780039527.01.T01 |
| Chr7 | exon | 65293400 | 65293446 | 65293400 | ID=MsG0780039527.01.T01:exon:10328;Parent=MsG0780039527.01.T01 |
| Chr7 | CDS | 65293400 | 65293446 | 65293400 | ID=MsG0780039527.01.T01:cds;Parent=MsG0780039527.01.T01 |
| Chr7 | CDS | 65291533 | 65291613 | 65291533 | ID=MsG0780039527.01.T01:cds;Parent=MsG0780039527.01.T01 |
| Chr7 | CDS | 65290056 | 65291019 | 65290056 | ID=MsG0780039527.01.T01:cds;Parent=MsG0780039527.01.T01 |
| Chr7 | three_prime_UTR | 65289905 | 65290055 | 65289905 | ID=MsG0780039527.01.T01:three_prime_utr;Parent=MsG0780039527.01.T01 |
| Gene Sequence |
| Protein sequence |
