Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048738.01.T01 | XP_024626810.1 | 76.522 | 575 | 40 | 7 | 1 | 481 | 1 | 574 | 0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048738.01.T01 | O80970 | 48.432 | 574 | 183 | 12 | 1 | 474 | 1 | 561 | 4.05E-168 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048738.01.T01 | G7IE60 | 76.522 | 575 | 40 | 7 | 1 | 481 | 1 | 574 | 0.0 | 834 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048738.01 | MsG0180002404.01 | 0.809733 | 1.635345e-50 | 9.677546e-48 |
| MsG0080048738.01 | MsG0180003421.01 | 0.804872 | 1.753742e-49 | 9.145114e-47 |
| MsG0080048738.01 | MsG0180003905.01 | 0.857151 | 1.984715e-62 | 4.851790e-59 |
| MsG0080048738.01 | MsG0180004064.01 | 0.800558 | 1.362265e-48 | 6.362402e-46 |
| MsG0080048738.01 | MsG0180004120.01 | 0.813323 | 2.712833e-51 | 1.766081e-48 |
| MsG0080048738.01 | MsG0180004705.01 | 0.804042 | 2.612096e-49 | 1.333189e-46 |
| MsG0080048738.01 | MsG0180004828.01 | 0.809915 | 1.493978e-50 | 8.883182e-48 |
| MsG0080048738.01 | MsG0180005769.01 | 0.894440 | 2.460801e-75 | 2.447006e-71 |
| MsG0080048738.01 | MsG0180005780.01 | 0.816343 | 5.806786e-52 | 4.104179e-49 |
| MsG0080048738.01 | MsG0180005819.01 | 0.850206 | 1.972659e-60 | 3.834713e-57 |
| MsG0080048738.01 | MsG0280006717.01 | 0.847829 | 9.029624e-60 | 1.625039e-56 |
| MsG0080048738.01 | MsG0280006851.01 | 0.800980 | 1.117234e-48 | 5.274531e-46 |
| MsG0080048738.01 | MsG0280009526.01 | 0.808270 | 3.363881e-50 | 1.914999e-47 |
| MsG0080048738.01 | MsG0380015402.01 | 0.829166 | 5.992098e-55 | 6.084267e-52 |
| MsG0080048738.01 | MsG0380015656.01 | 0.808972 | 2.381053e-50 | 1.380666e-47 |
| MsG0080048738.01 | MsG0380016250.01 | 0.829991 | 3.775755e-55 | 3.927118e-52 |
| MsG0080048738.01 | MsG0380016380.01 | -0.802950 | 4.399238e-49 | 2.183185e-46 |
| MsG0080048738.01 | MsG0380017128.01 | 0.830570 | 2.726291e-55 | 2.883356e-52 |
| MsG0080048738.01 | MsG0380017332.01 | 0.812580 | 3.946873e-51 | 2.518900e-48 |
| MsG0080048738.01 | MsG0380017588.01 | 0.877413 | 6.409540e-69 | 3.220295e-65 |
| MsG0080048738.01 | MsG0380017696.01 | 0.803240 | 3.830580e-49 | 1.915182e-46 |
| MsG0080048738.01 | MsG0380017826.01 | 0.836589 | 8.565863e-57 | 1.084316e-53 |
| MsG0080048738.01 | MsG0480018228.01 | 0.818829 | 1.598340e-52 | 1.209400e-49 |
| MsG0080048738.01 | MsG0480018362.01 | 0.808304 | 3.308463e-50 | 1.885046e-47 |
| MsG0080048738.01 | MsG0480018486.01 | 0.833981 | 3.901343e-56 | 4.567198e-53 |
| MsG0080048738.01 | MsG0480020398.01 | 0.834830 | 2.388264e-56 | 2.867739e-53 |
| MsG0080048738.01 | MsG0480020937.01 | 0.800537 | 1.375894e-48 | 6.422522e-46 |
| MsG0080048738.01 | MsG0480021486.01 | 0.804001 | 2.663507e-49 | 1.358022e-46 |
| MsG0080048738.01 | MsG0480021740.01 | 0.801302 | 9.598834e-49 | 4.568450e-46 |
| MsG0080048738.01 | MsG0480022302.01 | 0.824812 | 6.588702e-54 | 5.899675e-51 |
| MsG0080048738.01 | MsG0480023414.01 | 0.828378 | 9.293127e-55 | 9.221235e-52 |
| MsG0080048738.01 | MsG0480023626.01 | 0.807079 | 6.021842e-50 | 3.322806e-47 |
| MsG0080048738.01 | MsG0480023706.01 | 0.844352 | 7.973028e-59 | 1.283682e-55 |
| MsG0080048738.01 | MsG0580025633.01 | 0.812946 | 3.281758e-51 | 2.114658e-48 |
| MsG0080048738.01 | MsG0580026029.01 | 0.808967 | 2.387729e-50 | 1.384328e-47 |
| MsG0080048738.01 | MsG0580026343.01 | 0.846074 | 2.729730e-59 | 4.643322e-56 |
| MsG0080048738.01 | MsG0580026446.01 | 0.816079 | 6.651956e-52 | 4.667660e-49 |
| MsG0080048738.01 | MsG0580028955.01 | 0.801092 | 1.060005e-48 | 5.018542e-46 |
| MsG0080048738.01 | MsG0580029696.01 | 0.808078 | 3.694942e-50 | 2.092767e-47 |
| MsG0080048738.01 | MsG0580030141.01 | 0.814504 | 1.489561e-51 | 1.001341e-48 |
| MsG0080048738.01 | MsG0680035776.01 | 0.801805 | 7.570932e-49 | 3.649325e-46 |
| MsG0080048738.01 | MsG0780036553.01 | 0.804871 | 1.754169e-49 | 9.147249e-47 |
| MsG0080048738.01 | MsG0780038647.01 | 0.809654 | 1.700859e-50 | 1.004412e-47 |
| MsG0080048738.01 | MsG0780040899.01 | 0.806560 | 7.753962e-50 | 4.221814e-47 |
| MsG0080048738.01 | MsG0780040978.01 | 0.848176 | 7.243214e-60 | 1.317907e-56 |
| MsG0080048738.01 | MsG0780040990.01 | 0.837271 | 5.735609e-57 | 7.411608e-54 |
| MsG0080048738.01 | MsG0780041232.01 | 0.835345 | 1.771662e-56 | 2.160639e-53 |
| MsG0080048738.01 | MsG0880042833.01 | 0.809631 | 1.719728e-50 | 1.014998e-47 |
| MsG0080048738.01 | MsG0880045356.01 | 0.844908 | 5.648649e-59 | 9.254919e-56 |
| MsG0080048738.01 | MsG0880047057.01 | 0.800186 | 1.621528e-48 | 7.502132e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041271.01 | MsG0080048738.01 | PPI |
| MsG0180000534.01 | MsG0080048738.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048738.01.T01 | MTR_1g106430 | 76.522 | 575 | 40 | 7 | 1 | 481 | 1 | 574 | 0.0 | 834 |
| MsG0080048738.01.T01 | MTR_5g015790 | 53.680 | 557 | 158 | 13 | 1 | 461 | 1 | 553 | 4.98e-179 | 516 |
| MsG0080048738.01.T01 | MTR_1g014070 | 46.531 | 490 | 164 | 9 | 1 | 395 | 1 | 487 | 7.55e-132 | 395 |
| MsG0080048738.01.T01 | MTR_2g027410 | 32.421 | 475 | 248 | 10 | 1 | 404 | 1 | 473 | 2.54e-75 | 247 |
| MsG0080048738.01.T01 | MTR_5g032780 | 35.946 | 370 | 170 | 10 | 1 | 320 | 1 | 353 | 1.07e-56 | 199 |
| MsG0080048738.01.T01 | MTR_5g032780 | 53.659 | 123 | 56 | 1 | 293 | 415 | 416 | 537 | 6.68e-35 | 138 |
| MsG0080048738.01.T01 | MTR_2g027410 | 31.421 | 401 | 204 | 9 | 75 | 404 | 1 | 401 | 2.19e-56 | 195 |
| MsG0080048738.01.T01 | MTR_1g082690 | 29.825 | 456 | 252 | 12 | 11 | 404 | 43 | 492 | 5.94e-56 | 195 |
| MsG0080048738.01.T01 | MTR_7g108290 | 30.380 | 474 | 224 | 11 | 23 | 396 | 31 | 498 | 4.21e-55 | 195 |
| MsG0080048738.01.T01 | MTR_8g069330 | 54.144 | 181 | 80 | 2 | 1 | 180 | 1 | 179 | 2.32e-54 | 192 |
| MsG0080048738.01.T01 | MTR_8g069330 | 56.911 | 123 | 52 | 1 | 293 | 415 | 381 | 502 | 2.76e-36 | 142 |
| MsG0080048738.01.T01 | MTR_2g009340 | 47.778 | 180 | 92 | 1 | 5 | 184 | 23 | 200 | 2.07e-50 | 182 |
| MsG0080048738.01.T01 | MTR_2g009340 | 39.267 | 191 | 93 | 4 | 223 | 408 | 386 | 558 | 1.89e-32 | 131 |
| MsG0080048738.01.T01 | MTR_4g093850 | 44.444 | 180 | 98 | 1 | 5 | 184 | 23 | 200 | 1.68e-49 | 177 |
| MsG0080048738.01.T01 | MTR_4g093850 | 44.444 | 180 | 98 | 1 | 5 | 184 | 23 | 200 | 5.79e-49 | 178 |
| MsG0080048738.01.T01 | MTR_4g093850 | 51.754 | 114 | 55 | 0 | 292 | 405 | 437 | 550 | 2.55e-31 | 128 |
| MsG0080048738.01.T01 | MTR_5g075640 | 27.742 | 465 | 251 | 11 | 25 | 407 | 22 | 483 | 9.91e-49 | 176 |
| MsG0080048738.01.T01 | MTR_4g134210 | 43.850 | 187 | 103 | 1 | 1 | 187 | 1 | 185 | 1.79e-48 | 176 |
| MsG0080048738.01.T01 | MTR_4g134210 | 53.535 | 99 | 46 | 0 | 296 | 394 | 375 | 473 | 5.15e-27 | 114 |
| MsG0080048738.01.T01 | MTR_3g062540 | 27.731 | 476 | 253 | 16 | 6 | 401 | 1 | 465 | 1.30e-46 | 170 |
| MsG0080048738.01.T01 | MTR_2g048390 | 39.574 | 235 | 135 | 4 | 1 | 234 | 1 | 229 | 1.15e-43 | 160 |
| MsG0080048738.01.T01 | MTR_2g048390 | 64.706 | 51 | 18 | 0 | 295 | 345 | 402 | 452 | 6.66e-11 | 64.7 |
| MsG0080048738.01.T01 | MTR_5g075640 | 26.697 | 442 | 239 | 11 | 48 | 407 | 2 | 440 | 2.82e-40 | 152 |
| MsG0080048738.01.T01 | MTR_2g018750 | 39.352 | 216 | 122 | 5 | 1 | 213 | 1 | 210 | 6.04e-40 | 152 |
| MsG0080048738.01.T01 | MTR_2g018750 | 39.378 | 193 | 98 | 5 | 295 | 470 | 397 | 587 | 1.84e-30 | 125 |
| MsG0080048738.01.T01 | MTR_3g062540 | 27.483 | 433 | 224 | 15 | 48 | 401 | 2 | 423 | 1.28e-38 | 147 |
| MsG0080048738.01.T01 | MTR_1g064360 | 39.691 | 194 | 103 | 4 | 1 | 183 | 1 | 191 | 1.17e-37 | 145 |
| MsG0080048738.01.T01 | MTR_1g064360 | 43.827 | 162 | 86 | 3 | 295 | 453 | 378 | 537 | 2.19e-31 | 127 |
| MsG0080048738.01.T01 | MTR_5g016060 | 41.611 | 149 | 87 | 0 | 25 | 173 | 37 | 185 | 5.79e-36 | 141 |
| MsG0080048738.01.T01 | MTR_5g016060 | 49.558 | 113 | 56 | 1 | 296 | 407 | 393 | 505 | 3.50e-30 | 124 |
| MsG0080048738.01.T01 | MTR_1g094850 | 41.714 | 175 | 94 | 4 | 1 | 172 | 1 | 170 | 7.95e-35 | 137 |
| MsG0080048738.01.T01 | MTR_1g094850 | 40.964 | 166 | 88 | 3 | 296 | 454 | 394 | 556 | 1.68e-29 | 122 |
| MsG0080048738.01.T01 | MTR_4g095430 | 41.497 | 147 | 84 | 1 | 25 | 169 | 10 | 156 | 1.37e-32 | 131 |
| MsG0080048738.01.T01 | MTR_4g095430 | 39.634 | 164 | 86 | 4 | 296 | 447 | 365 | 527 | 1.18e-26 | 113 |
| MsG0080048738.01.T01 | MTR_4g011530 | 57.547 | 106 | 45 | 0 | 291 | 396 | 208 | 313 | 1.88e-32 | 129 |
| MsG0080048738.01.T01 | MTR_8g090220 | 40.000 | 160 | 87 | 3 | 18 | 172 | 42 | 197 | 3.54e-32 | 129 |
| MsG0080048738.01.T01 | MTR_8g090220 | 51.515 | 99 | 48 | 0 | 291 | 389 | 406 | 504 | 5.08e-29 | 120 |
| MsG0080048738.01.T01 | MTR_8g090220 | 40.000 | 160 | 87 | 3 | 18 | 172 | 42 | 197 | 5.81e-32 | 129 |
| MsG0080048738.01.T01 | MTR_8g090220 | 43.609 | 133 | 64 | 1 | 285 | 406 | 400 | 532 | 2.72e-29 | 122 |
| MsG0080048738.01.T01 | MTR_2g084595 | 38.596 | 171 | 101 | 2 | 13 | 181 | 10 | 178 | 4.62e-31 | 125 |
| MsG0080048738.01.T01 | MTR_2g102730 | 49.618 | 131 | 59 | 1 | 291 | 414 | 188 | 318 | 6.71e-31 | 124 |
| MsG0080048738.01.T01 | MTR_2g084595 | 38.596 | 171 | 101 | 2 | 13 | 181 | 10 | 178 | 1.61e-30 | 125 |
| MsG0080048738.01.T01 | MTR_2g084595 | 46.667 | 135 | 67 | 2 | 296 | 428 | 396 | 527 | 2.07e-26 | 113 |
| MsG0080048738.01.T01 | MTR_5g016060 | 49.558 | 113 | 56 | 1 | 296 | 407 | 279 | 391 | 2.18e-30 | 124 |
| MsG0080048738.01.T01 | MTR_4g022330 | 45.283 | 159 | 83 | 2 | 296 | 453 | 391 | 546 | 2.54e-30 | 124 |
| MsG0080048738.01.T01 | MTR_4g022330 | 33.987 | 153 | 101 | 0 | 23 | 175 | 29 | 181 | 1.79e-27 | 116 |
| MsG0080048738.01.T01 | MTR_8g078900 | 32.685 | 257 | 136 | 7 | 23 | 253 | 15 | 260 | 2.85e-30 | 123 |
| MsG0080048738.01.T01 | MTR_8g078900 | 31.907 | 257 | 138 | 7 | 23 | 253 | 15 | 260 | 7.74e-30 | 123 |
| MsG0080048738.01.T01 | MTR_8g078900 | 54.369 | 103 | 47 | 0 | 294 | 396 | 412 | 514 | 5.92e-29 | 120 |
| MsG0080048738.01.T01 | MTR_8g078900 | 54.369 | 103 | 47 | 0 | 294 | 396 | 372 | 474 | 5.98e-29 | 120 |
| MsG0080048738.01.T01 | MTR_8g078900 | 31.579 | 190 | 113 | 5 | 70 | 253 | 42 | 220 | 3.51e-21 | 97.1 |
| MsG0080048738.01.T01 | MTR_8g078900 | 54.369 | 103 | 47 | 0 | 294 | 396 | 382 | 484 | 6.51e-29 | 120 |
| MsG0080048738.01.T01 | MTR_8g078900 | 31.799 | 239 | 126 | 7 | 41 | 253 | 3 | 230 | 3.93e-26 | 112 |
| MsG0080048738.01.T01 | MTR_1g088885 | 49.153 | 118 | 53 | 1 | 286 | 396 | 377 | 494 | 1.57e-28 | 119 |
| MsG0080048738.01.T01 | MTR_1g088885 | 30.435 | 253 | 161 | 6 | 23 | 261 | 31 | 282 | 2.02e-28 | 119 |
| MsG0080048738.01.T01 | MTR_7g073980 | 39.877 | 163 | 92 | 2 | 291 | 453 | 384 | 540 | 1.36e-27 | 116 |
| MsG0080048738.01.T01 | MTR_7g073980 | 34.591 | 159 | 100 | 3 | 18 | 173 | 23 | 180 | 1.20e-25 | 110 |
| MsG0080048738.01.T01 | MTR_8g078900 | 32.632 | 190 | 111 | 5 | 70 | 253 | 42 | 220 | 1.31e-21 | 97.4 |
| MsG0080048738.01.T01 | MTR_1g105870 | 35.385 | 130 | 82 | 1 | 36 | 163 | 39 | 168 | 1.69e-21 | 94.4 |
| MsG0080048738.01.T01 | MTR_4g045767 | 39.850 | 133 | 77 | 2 | 296 | 426 | 342 | 473 | 2.27e-16 | 82.0 |
| MsG0080048738.01.T01 | MTR_1g035720 | 36.364 | 99 | 63 | 0 | 296 | 394 | 359 | 457 | 4.57e-15 | 77.8 |
| MsG0080048738.01.T01 | MTR_1g035720 | 36.885 | 122 | 69 | 6 | 31 | 149 | 6 | 122 | 3.89e-11 | 65.5 |
| MsG0080048738.01.T01 | MTR_4g074190 | 36.792 | 106 | 67 | 0 | 296 | 401 | 320 | 425 | 3.58e-14 | 75.1 |
| MsG0080048738.01.T01 | MTR_4g074190 | 36.792 | 106 | 67 | 0 | 296 | 401 | 366 | 471 | 4.64e-14 | 74.7 |
| MsG0080048738.01.T01 | MTR_2g010890 | 33.077 | 130 | 67 | 2 | 275 | 384 | 231 | 360 | 1.07e-12 | 70.1 |
| MsG0080048738.01.T01 | MTR_2g048375 | 38.614 | 101 | 54 | 2 | 362 | 454 | 1 | 101 | 2.00e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048738.01.T01 | AT2G14820 | 48.432 | 574 | 183 | 12 | 1 | 474 | 1 | 561 | 4.13e-169 | 491 |
| MsG0080048738.01.T01 | AT2G14820 | 48.432 | 574 | 183 | 12 | 1 | 474 | 1 | 561 | 4.13e-169 | 491 |
| MsG0080048738.01.T01 | AT4G37590 | 47.917 | 528 | 187 | 13 | 1 | 453 | 1 | 515 | 6.65e-146 | 430 |
| MsG0080048738.01.T01 | AT2G23050 | 50.641 | 468 | 151 | 14 | 1 | 401 | 1 | 455 | 1.14e-128 | 382 |
| MsG0080048738.01.T01 | AT5G67440 | 65.829 | 199 | 62 | 3 | 1 | 194 | 1 | 198 | 1.74e-86 | 276 |
| MsG0080048738.01.T01 | AT5G67440 | 48.352 | 182 | 55 | 4 | 274 | 427 | 326 | 496 | 2.32e-37 | 144 |
| MsG0080048738.01.T01 | AT5G67440 | 65.829 | 199 | 62 | 3 | 1 | 194 | 1 | 198 | 1.74e-86 | 276 |
| MsG0080048738.01.T01 | AT5G67440 | 48.352 | 182 | 55 | 4 | 274 | 427 | 326 | 496 | 2.32e-37 | 144 |
| MsG0080048738.01.T01 | AT4G31820 | 61.702 | 188 | 71 | 1 | 1 | 188 | 1 | 187 | 2.50e-78 | 255 |
| MsG0080048738.01.T01 | AT4G31820 | 58.879 | 107 | 41 | 1 | 294 | 400 | 369 | 472 | 8.06e-32 | 129 |
| MsG0080048738.01.T01 | AT2G23050 | 44.444 | 351 | 121 | 10 | 113 | 401 | 1 | 339 | 5.88e-73 | 235 |
| MsG0080048738.01.T01 | AT5G67385 | 33.820 | 479 | 221 | 16 | 7 | 396 | 3 | 474 | 1.69e-67 | 227 |
| MsG0080048738.01.T01 | AT5G67440 | 64.331 | 157 | 51 | 2 | 43 | 194 | 5 | 161 | 1.89e-62 | 213 |
| MsG0080048738.01.T01 | AT5G67440 | 48.352 | 182 | 55 | 4 | 274 | 427 | 289 | 459 | 1.19e-37 | 145 |
| MsG0080048738.01.T01 | AT3G08660 | 31.681 | 464 | 241 | 11 | 8 | 404 | 21 | 475 | 2.28e-61 | 211 |
| MsG0080048738.01.T01 | AT5G48800 | 29.594 | 517 | 269 | 13 | 23 | 453 | 36 | 543 | 9.62e-61 | 209 |
| MsG0080048738.01.T01 | AT5G67385 | 33.716 | 436 | 194 | 15 | 49 | 396 | 1 | 429 | 8.23e-57 | 198 |
| MsG0080048738.01.T01 | AT5G67385 | 33.716 | 436 | 194 | 15 | 49 | 396 | 1 | 429 | 8.23e-57 | 198 |
| MsG0080048738.01.T01 | AT5G67385 | 33.716 | 436 | 194 | 15 | 49 | 396 | 1 | 429 | 8.23e-57 | 198 |
| MsG0080048738.01.T01 | AT5G67385 | 33.716 | 436 | 194 | 15 | 49 | 396 | 1 | 429 | 8.23e-57 | 198 |
| MsG0080048738.01.T01 | AT1G67900 | 39.716 | 282 | 129 | 7 | 1 | 248 | 1 | 275 | 7.39e-54 | 191 |
| MsG0080048738.01.T01 | AT1G67900 | 44.271 | 192 | 86 | 5 | 293 | 466 | 406 | 594 | 2.11e-36 | 142 |
| MsG0080048738.01.T01 | AT1G67900 | 39.716 | 282 | 129 | 7 | 1 | 248 | 1 | 275 | 7.39e-54 | 191 |
| MsG0080048738.01.T01 | AT1G67900 | 44.271 | 192 | 86 | 5 | 293 | 466 | 406 | 594 | 2.11e-36 | 142 |
| MsG0080048738.01.T01 | AT1G67900 | 39.716 | 282 | 129 | 7 | 1 | 248 | 1 | 275 | 7.39e-54 | 191 |
| MsG0080048738.01.T01 | AT1G67900 | 44.271 | 192 | 86 | 5 | 293 | 466 | 406 | 594 | 2.11e-36 | 142 |
| MsG0080048738.01.T01 | AT1G67900 | 39.716 | 282 | 129 | 7 | 1 | 248 | 1 | 275 | 7.39e-54 | 191 |
| MsG0080048738.01.T01 | AT1G67900 | 44.271 | 192 | 86 | 5 | 293 | 466 | 406 | 594 | 2.11e-36 | 142 |
| MsG0080048738.01.T01 | AT1G67900 | 39.716 | 282 | 129 | 7 | 1 | 248 | 1 | 275 | 7.39e-54 | 191 |
| MsG0080048738.01.T01 | AT1G67900 | 44.271 | 192 | 86 | 5 | 293 | 466 | 406 | 594 | 2.11e-36 | 142 |
| MsG0080048738.01.T01 | AT1G67900 | 39.716 | 282 | 129 | 7 | 1 | 248 | 1 | 275 | 7.39e-54 | 191 |
| MsG0080048738.01.T01 | AT1G67900 | 44.271 | 192 | 86 | 5 | 293 | 466 | 406 | 594 | 2.11e-36 | 142 |
| MsG0080048738.01.T01 | AT4G31820 | 62.687 | 134 | 50 | 0 | 55 | 188 | 1 | 134 | 3.74e-53 | 187 |
| MsG0080048738.01.T01 | AT4G31820 | 58.879 | 107 | 41 | 1 | 294 | 400 | 316 | 419 | 5.00e-32 | 129 |
| MsG0080048738.01.T01 | AT3G26490 | 44.749 | 219 | 105 | 5 | 1 | 213 | 1 | 209 | 8.53e-53 | 186 |
| MsG0080048738.01.T01 | AT3G26490 | 44.749 | 219 | 105 | 5 | 1 | 213 | 1 | 209 | 1.73e-52 | 187 |
| MsG0080048738.01.T01 | AT3G26490 | 54.717 | 106 | 48 | 0 | 296 | 401 | 407 | 512 | 2.40e-28 | 119 |
| MsG0080048738.01.T01 | AT3G26490 | 44.749 | 219 | 105 | 5 | 1 | 213 | 1 | 209 | 1.73e-52 | 187 |
| MsG0080048738.01.T01 | AT3G26490 | 54.717 | 106 | 48 | 0 | 296 | 401 | 407 | 512 | 2.40e-28 | 119 |
| MsG0080048738.01.T01 | AT3G26490 | 44.749 | 219 | 105 | 5 | 1 | 213 | 1 | 209 | 1.73e-52 | 187 |
| MsG0080048738.01.T01 | AT3G26490 | 54.717 | 106 | 48 | 0 | 296 | 401 | 407 | 512 | 2.40e-28 | 119 |
| MsG0080048738.01.T01 | AT3G49970 | 31.568 | 472 | 237 | 16 | 41 | 450 | 7 | 454 | 3.16e-51 | 182 |
| MsG0080048738.01.T01 | AT3G49970 | 31.568 | 472 | 237 | 16 | 41 | 450 | 7 | 454 | 3.16e-51 | 182 |
| MsG0080048738.01.T01 | AT3G08660 | 31.592 | 402 | 207 | 9 | 70 | 404 | 15 | 415 | 8.93e-51 | 181 |
| MsG0080048738.01.T01 | AT5G64330 | 44.944 | 178 | 96 | 1 | 7 | 184 | 33 | 208 | 2.74e-47 | 174 |
| MsG0080048738.01.T01 | AT5G64330 | 57.009 | 107 | 46 | 0 | 292 | 398 | 501 | 607 | 2.53e-33 | 134 |
| MsG0080048738.01.T01 | AT5G64330 | 44.944 | 178 | 96 | 1 | 7 | 184 | 33 | 208 | 4.89e-47 | 174 |
| MsG0080048738.01.T01 | AT5G64330 | 58.095 | 105 | 44 | 0 | 292 | 396 | 501 | 605 | 1.98e-33 | 134 |
| MsG0080048738.01.T01 | AT5G47800 | 42.246 | 187 | 106 | 1 | 1 | 187 | 1 | 185 | 3.13e-46 | 169 |
| MsG0080048738.01.T01 | AT5G47800 | 51.818 | 110 | 51 | 1 | 296 | 405 | 376 | 483 | 4.85e-28 | 117 |
| MsG0080048738.01.T01 | AT5G47800 | 42.246 | 187 | 106 | 1 | 1 | 187 | 1 | 185 | 3.13e-46 | 169 |
| MsG0080048738.01.T01 | AT5G47800 | 51.818 | 110 | 51 | 1 | 296 | 405 | 376 | 483 | 4.85e-28 | 117 |
| MsG0080048738.01.T01 | AT5G47800 | 42.246 | 187 | 106 | 1 | 1 | 187 | 1 | 185 | 3.13e-46 | 169 |
| MsG0080048738.01.T01 | AT5G47800 | 51.818 | 110 | 51 | 1 | 296 | 405 | 376 | 483 | 4.85e-28 | 117 |
| MsG0080048738.01.T01 | AT5G47800 | 42.246 | 187 | 106 | 1 | 1 | 187 | 114 | 298 | 2.14e-45 | 168 |
| MsG0080048738.01.T01 | AT5G47800 | 51.818 | 110 | 51 | 1 | 296 | 405 | 489 | 596 | 9.57e-28 | 117 |
| MsG0080048738.01.T01 | AT3G08660 | 29.383 | 405 | 211 | 10 | 7 | 345 | 20 | 415 | 3.13e-41 | 153 |
| MsG0080048738.01.T01 | AT5G03250 | 41.398 | 186 | 98 | 4 | 1 | 181 | 1 | 180 | 3.46e-41 | 155 |
| MsG0080048738.01.T01 | AT5G03250 | 53.982 | 113 | 52 | 0 | 288 | 400 | 394 | 506 | 9.73e-32 | 129 |
| MsG0080048738.01.T01 | AT1G30440 | 38.679 | 212 | 125 | 3 | 1 | 210 | 1 | 209 | 6.65e-40 | 153 |
| MsG0080048738.01.T01 | AT1G30440 | 56.190 | 105 | 46 | 0 | 296 | 400 | 408 | 512 | 2.35e-30 | 125 |
| MsG0080048738.01.T01 | AT5G64330 | 44.595 | 148 | 81 | 1 | 38 | 184 | 2 | 149 | 4.78e-37 | 144 |
| MsG0080048738.01.T01 | AT5G64330 | 57.009 | 107 | 46 | 0 | 292 | 398 | 442 | 548 | 1.60e-33 | 134 |
| MsG0080048738.01.T01 | AT5G13600 | 37.441 | 211 | 119 | 6 | 1 | 206 | 1 | 203 | 5.00e-35 | 138 |
| MsG0080048738.01.T01 | AT5G13600 | 56.190 | 105 | 46 | 0 | 296 | 400 | 393 | 497 | 4.96e-31 | 126 |
| MsG0080048738.01.T01 | AT1G03010 | 33.840 | 263 | 145 | 7 | 18 | 254 | 22 | 281 | 5.87e-34 | 135 |
| MsG0080048738.01.T01 | AT1G03010 | 48.413 | 126 | 58 | 1 | 286 | 404 | 386 | 511 | 3.26e-28 | 118 |
| MsG0080048738.01.T01 | AT1G03010 | 34.661 | 251 | 139 | 6 | 26 | 254 | 7 | 254 | 1.36e-33 | 134 |
| MsG0080048738.01.T01 | AT1G03010 | 48.413 | 126 | 58 | 1 | 286 | 404 | 359 | 484 | 2.79e-28 | 118 |
| MsG0080048738.01.T01 | AT1G03010 | 34.510 | 255 | 142 | 6 | 22 | 254 | 29 | 280 | 1.56e-33 | 134 |
| MsG0080048738.01.T01 | AT1G03010 | 48.413 | 126 | 58 | 1 | 286 | 404 | 385 | 510 | 3.02e-28 | 118 |
| MsG0080048738.01.T01 | AT5G03250 | 56.604 | 106 | 46 | 0 | 295 | 400 | 289 | 394 | 3.89e-32 | 128 |
| MsG0080048738.01.T01 | AT5G10250 | 38.961 | 154 | 93 | 1 | 23 | 175 | 45 | 198 | 1.36e-31 | 128 |
| MsG0080048738.01.T01 | AT5G10250 | 49.138 | 116 | 55 | 1 | 296 | 407 | 387 | 502 | 3.09e-28 | 118 |
| MsG0080048738.01.T01 | AT5G10250 | 38.961 | 154 | 93 | 1 | 23 | 175 | 45 | 198 | 1.62e-31 | 128 |
| MsG0080048738.01.T01 | AT5G10250 | 49.138 | 116 | 55 | 1 | 296 | 407 | 402 | 517 | 3.63e-28 | 118 |
| MsG0080048738.01.T01 | AT1G52770 | 53.153 | 111 | 52 | 0 | 291 | 401 | 198 | 308 | 2.16e-30 | 123 |
| MsG0080048738.01.T01 | AT2G47860 | 37.500 | 152 | 92 | 1 | 22 | 173 | 31 | 179 | 1.21e-29 | 121 |
| MsG0080048738.01.T01 | AT5G66560 | 44.604 | 139 | 64 | 1 | 292 | 417 | 387 | 525 | 1.27e-29 | 122 |
| MsG0080048738.01.T01 | AT5G66560 | 40.708 | 113 | 66 | 1 | 70 | 181 | 66 | 178 | 3.00e-20 | 94.4 |
| MsG0080048738.01.T01 | AT5G66560 | 44.604 | 139 | 64 | 1 | 292 | 417 | 397 | 535 | 1.32e-29 | 122 |
| MsG0080048738.01.T01 | AT5G66560 | 32.796 | 186 | 80 | 3 | 41 | 181 | 3 | 188 | 2.98e-22 | 100 |
| MsG0080048738.01.T01 | AT5G66560 | 44.604 | 139 | 64 | 1 | 292 | 417 | 426 | 564 | 1.33e-29 | 122 |
| MsG0080048738.01.T01 | AT5G66560 | 32.353 | 204 | 93 | 3 | 23 | 181 | 14 | 217 | 8.54e-25 | 108 |
| MsG0080048738.01.T01 | AT2G47860 | 35.714 | 168 | 100 | 2 | 22 | 184 | 31 | 195 | 2.52e-29 | 122 |
| MsG0080048738.01.T01 | AT2G47860 | 46.667 | 120 | 57 | 1 | 284 | 396 | 375 | 494 | 2.11e-26 | 113 |
| MsG0080048738.01.T01 | AT3G50840 | 37.156 | 218 | 114 | 4 | 285 | 482 | 295 | 509 | 7.06e-29 | 120 |
| MsG0080048738.01.T01 | AT3G50840 | 35.200 | 125 | 80 | 1 | 49 | 172 | 1 | 125 | 1.26e-15 | 79.7 |
| MsG0080048738.01.T01 | AT3G50840 | 37.156 | 218 | 114 | 4 | 285 | 482 | 295 | 509 | 7.06e-29 | 120 |
| MsG0080048738.01.T01 | AT3G50840 | 35.200 | 125 | 80 | 1 | 49 | 172 | 1 | 125 | 1.26e-15 | 79.7 |
| MsG0080048738.01.T01 | AT3G50840 | 37.156 | 218 | 114 | 4 | 285 | 482 | 331 | 545 | 8.44e-29 | 120 |
| MsG0080048738.01.T01 | AT3G50840 | 37.086 | 151 | 94 | 1 | 23 | 172 | 11 | 161 | 7.18e-24 | 105 |
| MsG0080048738.01.T01 | AT3G44820 | 32.203 | 177 | 115 | 2 | 8 | 181 | 5 | 179 | 2.89e-28 | 119 |
| MsG0080048738.01.T01 | AT3G44820 | 49.541 | 109 | 53 | 1 | 296 | 402 | 409 | 517 | 5.07e-26 | 112 |
| MsG0080048738.01.T01 | AT3G15570 | 52.830 | 106 | 50 | 0 | 291 | 396 | 203 | 308 | 4.00e-28 | 117 |
| MsG0080048738.01.T01 | AT3G08570 | 35.714 | 154 | 95 | 2 | 24 | 173 | 30 | 183 | 1.09e-27 | 117 |
| MsG0080048738.01.T01 | AT3G08570 | 47.170 | 106 | 56 | 0 | 291 | 396 | 385 | 490 | 7.45e-24 | 105 |
| MsG0080048738.01.T01 | AT2G30520 | 36.242 | 149 | 95 | 0 | 25 | 173 | 27 | 175 | 2.39e-27 | 115 |
| MsG0080048738.01.T01 | AT2G30520 | 45.545 | 101 | 55 | 0 | 296 | 396 | 369 | 469 | 5.93e-21 | 96.7 |
| MsG0080048738.01.T01 | AT2G47860 | 46.667 | 120 | 57 | 1 | 284 | 396 | 257 | 376 | 1.39e-26 | 113 |
| MsG0080048738.01.T01 | AT2G47860 | 46.667 | 120 | 57 | 1 | 284 | 396 | 257 | 376 | 1.39e-26 | 113 |
| MsG0080048738.01.T01 | AT2G47860 | 46.667 | 120 | 57 | 1 | 284 | 396 | 398 | 517 | 1.80e-26 | 113 |
| MsG0080048738.01.T01 | AT2G47860 | 31.414 | 191 | 100 | 3 | 22 | 184 | 31 | 218 | 5.61e-25 | 108 |
| MsG0080048738.01.T01 | AT2G47860 | 32.571 | 175 | 92 | 2 | 22 | 173 | 31 | 202 | 4.95e-25 | 108 |
| MsG0080048738.01.T01 | AT5G66560 | 32.353 | 204 | 93 | 3 | 23 | 181 | 14 | 217 | 6.74e-25 | 107 |
| MsG0080048738.01.T01 | AT5G48130 | 33.333 | 150 | 94 | 2 | 28 | 176 | 39 | 183 | 9.27e-23 | 102 |
| MsG0080048738.01.T01 | AT5G48130 | 41.121 | 107 | 63 | 0 | 291 | 397 | 364 | 470 | 1.55e-18 | 89.0 |
| MsG0080048738.01.T01 | AT2G30520 | 45.545 | 101 | 55 | 0 | 296 | 396 | 321 | 421 | 6.68e-21 | 96.3 |
| MsG0080048738.01.T01 | AT2G30520 | 36.508 | 126 | 80 | 0 | 48 | 173 | 2 | 127 | 1.13e-20 | 95.5 |
| MsG0080048738.01.T01 | AT2G30520 | 45.545 | 101 | 55 | 0 | 296 | 396 | 321 | 421 | 6.68e-21 | 96.3 |
| MsG0080048738.01.T01 | AT2G30520 | 36.508 | 126 | 80 | 0 | 48 | 173 | 2 | 127 | 1.13e-20 | 95.5 |
| MsG0080048738.01.T01 | AT5G17580 | 28.141 | 199 | 113 | 6 | 228 | 396 | 259 | 457 | 2.35e-16 | 82.0 |
| MsG0080048738.01.T01 | AT5G17580 | 29.167 | 168 | 112 | 4 | 11 | 175 | 3 | 166 | 8.63e-12 | 67.8 |
| MsG0080048738.01.T01 | AT5G17580 | 28.141 | 199 | 113 | 6 | 228 | 396 | 244 | 442 | 3.02e-16 | 81.6 |
| MsG0080048738.01.T01 | AT3G19850 | 37.000 | 100 | 63 | 0 | 296 | 395 | 365 | 464 | 9.46e-16 | 80.1 |
| MsG0080048738.01.T01 | AT3G19850 | 30.488 | 82 | 57 | 0 | 70 | 151 | 52 | 133 | 8.05e-11 | 64.7 |
| MsG0080048738.01.T01 | AT3G03510 | 39.048 | 105 | 60 | 2 | 296 | 396 | 257 | 361 | 3.56e-15 | 78.2 |
| MsG0080048738.01.T01 | AT3G49900 | 31.527 | 203 | 110 | 7 | 276 | 454 | 185 | 382 | 1.00e-14 | 77.0 |
| MsG0080048738.01.T01 | AT1G50280 | 34.737 | 95 | 62 | 0 | 296 | 390 | 333 | 427 | 1.76e-14 | 76.3 |
| MsG0080048738.01.T01 | AT1G50280 | 34.737 | 95 | 62 | 0 | 296 | 390 | 366 | 460 | 1.85e-14 | 76.3 |
| MsG0080048738.01.T01 | AT3G49900 | 31.068 | 206 | 110 | 8 | 276 | 454 | 185 | 385 | 5.61e-13 | 71.6 |
| MsG0080048738.01.T01 | AT3G22104 | 39.535 | 86 | 52 | 0 | 296 | 381 | 335 | 420 | 2.99e-12 | 69.3 |
| MsG0080048738.01.T01 | AT3G22104 | 39.535 | 86 | 52 | 0 | 296 | 381 | 260 | 345 | 3.59e-12 | 68.6 |
| MsG0080048738.01.T01 | AT3G22104 | 39.535 | 86 | 52 | 0 | 296 | 381 | 260 | 345 | 3.59e-12 | 68.6 |
| MsG0080048738.01.T01 | AT3G22104 | 39.535 | 86 | 52 | 0 | 296 | 381 | 260 | 345 | 3.59e-12 | 68.6 |
Find 103 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATACCCTTGCTGAAATT+TGG | 0.196113 | contig409end:-36334 | MsG0080048738.01.T01:intergenic |
| CGTCTCATGATGGCCTTTAC+AGG | 0.230035 | contig409end:+36834 | MsG0080048738.01.T01:CDS |
| AAATCCAACAATGGTAAATT+AGG | 0.244177 | contig409end:-36773 | MsG0080048738.01.T01:intergenic |
| AACATGGATAAGGCTGTTAT+TGG | 0.275085 | contig409end:+37416 | MsG0080048738.01.T01:CDS |
| TTCGAGTTCTAACTCCATTC+TGG | 0.292794 | contig409end:-36166 | MsG0080048738.01.T01:intergenic |
| CGGGGACAGCTGAGGATTAA+AGG | 0.313877 | contig409end:+37317 | MsG0080048738.01.T01:CDS |
| TTGATTCCTTTAGCTATGTC+TGG | 0.324835 | contig409end:-37224 | MsG0080048738.01.T01:intergenic |
| GGATCCTAATTTACCATTGT+TGG | 0.332636 | contig409end:+36769 | MsG0080048738.01.T01:CDS |
| ATCTTCAACCCACCAGTCTT+TGG | 0.338621 | contig409end:-36194 | MsG0080048738.01.T01:intergenic |
| CGCACCATCGTGTCATATTC+CGG | 0.345044 | contig409end:-37296 | MsG0080048738.01.T01:intergenic |
| CCATCAGTCTGAAATGTATC+TGG | 0.381210 | contig409end:-34087 | MsG0080048738.01.T01:intergenic |
| ATAACAGCCTTATCCATGTT+TGG | 0.388738 | contig409end:-37413 | MsG0080048738.01.T01:intergenic |
| GAAGAGTATATGCCAGCTAA+TGG | 0.411454 | contig409end:+37073 | MsG0080048738.01.T01:CDS |
| TGTAGTCTGAAGAAGGATAA+TGG | 0.416115 | contig409end:-35991 | MsG0080048738.01.T01:intergenic |
| ACATGAAACACTGCCTTTCT+CGG | 0.422062 | contig409end:-36418 | MsG0080048738.01.T01:intergenic |
| AAACATCGATCTTGAAAAGA+AGG | 0.427976 | contig409end:-35932 | MsG0080048738.01.T01:intergenic |
| GTCAGAACCGCTGCGTCATC+GGG | 0.436682 | contig409end:+37191 | MsG0080048738.01.T01:CDS |
| GGTCAGAACCGCTGCGTCAT+CGG | 0.438094 | contig409end:+37190 | MsG0080048738.01.T01:CDS |
| CTGATGGGAACAACAATGTT+AGG | 0.441088 | contig409end:+34103 | MsG0080048738.01.T01:CDS |
| AAGATGAAGTTTATGAAACT+TGG | 0.441776 | contig409end:+34057 | None:intergenic |
| GAATCAAAGACCTGAGCATT+GGG | 0.443547 | contig409end:+37240 | MsG0080048738.01.T01:CDS |
| CAGATATTATTGTCTGCATA+GGG | 0.447255 | contig409end:+35095 | MsG0080048738.01.T01:CDS |
| TACAAAGTCTTTGTCACCAT+TGG | 0.450362 | contig409end:+36010 | MsG0080048738.01.T01:CDS |
| AATCACATTGTAAGCATTGA+GGG | 0.462223 | contig409end:-35853 | MsG0080048738.01.T01:intergenic |
| ATTCAAATTTCAGACATTCC+TGG | 0.463677 | contig409end:+35777 | MsG0080048738.01.T01:CDS |
| CTTACAATGTGATTGCTACT+AGG | 0.469814 | contig409end:+35862 | MsG0080048738.01.T01:CDS |
| ACCATTGGATGAGGAGCAAA+AGG | 0.477736 | contig409end:+36025 | MsG0080048738.01.T01:CDS |
| TACATTGTAATCTCTCCATC+TGG | 0.481738 | contig409end:-36569 | MsG0080048738.01.T01:intergenic |
| GAAGTGTTGCCTTCCGAGAA+AGG | 0.485417 | contig409end:+36405 | MsG0080048738.01.T01:CDS |
| GTCTTTGTCACCATTGGATG+AGG | 0.486439 | contig409end:+36016 | MsG0080048738.01.T01:CDS |
| TTTCACCTTTGCTGATACCA+GGG | 0.486873 | contig409end:-37049 | MsG0080048738.01.T01:intergenic |
| GTTGGAAACAGTTTCAAAGA+TGG | 0.488525 | contig409end:+37380 | MsG0080048738.01.T01:CDS |
| TGCTAAACCAAACATGGATA+AGG | 0.489081 | contig409end:+37406 | MsG0080048738.01.T01:CDS |
| CCAGATACATTTCAGACTGA+TGG | 0.490097 | contig409end:+34087 | MsG0080048738.01.T01:CDS |
| ATGGTTGCAAAACTCATAGA+TGG | 0.492757 | contig409end:+36725 | MsG0080048738.01.T01:CDS |
| GCTTTCTGCAATCCATTAGC+TGG | 0.493502 | contig409end:-37085 | MsG0080048738.01.T01:intergenic |
| GGCTATTGACACATATTTGA+AGG | 0.499410 | contig409end:+36856 | MsG0080048738.01.T01:CDS |
| ACTCGAAATGTGCCAAAGAC+TGG | 0.501652 | contig409end:+36182 | MsG0080048738.01.T01:CDS |
| GGAATCAAAGACCTGAGCAT+TGG | 0.502284 | contig409end:+37239 | MsG0080048738.01.T01:CDS |
| AGTCTGAAATGTATCTGGCT+TGG | 0.503488 | contig409end:-34082 | MsG0080048738.01.T01:intergenic |
| GGAATATGACACGATGGTGC+GGG | 0.504601 | contig409end:+37298 | MsG0080048738.01.T01:CDS |
| AGGTGTGCAGCAGAGTATCT+TGG | 0.508603 | contig409end:+35882 | MsG0080048738.01.T01:CDS |
| ATGCATGAAAACATTGAGAA+AGG | 0.510465 | contig409end:+35906 | MsG0080048738.01.T01:CDS |
| TCCCGACCTTGAGCTACCGT+TGG | 0.511760 | contig409end:-37264 | MsG0080048738.01.T01:intergenic |
| ATCAGATGCCTCTAAGCTGA+TGG | 0.515822 | contig409end:+36706 | MsG0080048738.01.T01:intron |
| TCAGATATTATTGTCTGCAT+AGG | 0.515929 | contig409end:+35094 | MsG0080048738.01.T01:CDS |
| AGTTCTAACTCCATTCTGGT+TGG | 0.516845 | contig409end:-36162 | MsG0080048738.01.T01:intergenic |
| CATTGAATCTATAGCAAACA+AGG | 0.517035 | contig409end:+36061 | MsG0080048738.01.T01:CDS |
| ATGTGTCAATAGCCCTGTAA+AGG | 0.517885 | contig409end:-36847 | MsG0080048738.01.T01:intergenic |
| TCAGCAACTAGAGGAGGCTT+CGG | 0.520422 | contig409end:+36524 | MsG0080048738.01.T01:intron |
| GGCTTTGAGTCCAACCAGAA+TGG | 0.526969 | contig409end:+36152 | MsG0080048738.01.T01:CDS |
| TACCGTTGGACCCAATGCTC+AGG | 0.527764 | contig409end:-37250 | MsG0080048738.01.T01:intergenic |
| ATCTCTCGTCCGTCTCATGA+TGG | 0.528536 | contig409end:+36824 | MsG0080048738.01.T01:CDS |
| AAGGTCGGGAACAACTAATC+CGG | 0.530475 | contig409end:+37277 | MsG0080048738.01.T01:CDS |
| TGCTTTGACACATCCTCACA+TGG | 0.533200 | contig409end:-36358 | MsG0080048738.01.T01:intergenic |
| TCCAACGGTAGCTCAAGGTC+GGG | 0.534974 | contig409end:+37263 | MsG0080048738.01.T01:CDS |
| GAGGATTAAAGGCATTAAGA+AGG | 0.552571 | contig409end:+37328 | MsG0080048738.01.T01:CDS |
| CAATCACATTGTAAGCATTG+AGG | 0.552608 | contig409end:-35854 | MsG0080048738.01.T01:intergenic |
| TTGAGACAAAGCAACGGAGT+TGG | 0.553727 | contig409end:+37362 | MsG0080048738.01.T01:CDS |
| AAGACTTTGTAGTCTGAAGA+AGG | 0.556254 | contig409end:-35998 | MsG0080048738.01.T01:intergenic |
| GACCTGAGCATTGGGTCCAA+CGG | 0.556700 | contig409end:+37248 | MsG0080048738.01.T01:CDS |
| CAGGTATGTTGCAAGTGAGT+TGG | 0.560221 | contig409end:+35069 | MsG0080048738.01.T01:intron |
| GTCCAACGGTAGCTCAAGGT+CGG | 0.564380 | contig409end:+37262 | MsG0080048738.01.T01:CDS |
| CGGAATATGACACGATGGTG+CGG | 0.565599 | contig409end:+37297 | MsG0080048738.01.T01:CDS |
| GAAACACTGCCTTTCTCGGA+AGG | 0.567727 | contig409end:-36414 | MsG0080048738.01.T01:intergenic |
| CGAAATGTGCCAAAGACTGG+TGG | 0.569139 | contig409end:+36185 | MsG0080048738.01.T01:CDS |
| ACCGACACGTGTAATTGTGC+AGG | 0.570689 | contig409end:+37151 | MsG0080048738.01.T01:CDS |
| GAGATTACAATGTATGATGT+TGG | 0.570865 | contig409end:+36578 | MsG0080048738.01.T01:CDS |
| CAGATACATTTCAGACTGAT+GGG | 0.573177 | contig409end:+34088 | MsG0080048738.01.T01:CDS |
| AGAAAGGCAGTGTTTCATGT+AGG | 0.577021 | contig409end:+36421 | MsG0080048738.01.T01:CDS |
| GCAGGTACTACATTTCGAGC+AGG | 0.578783 | contig409end:+37169 | MsG0080048738.01.T01:CDS |
| TCAAAGGCACTTGCACCACC+AGG | 0.579140 | contig409end:-35795 | MsG0080048738.01.T01:intergenic |
| TGGAGATGCTAAACCAAACA+TGG | 0.581860 | contig409end:+37400 | MsG0080048738.01.T01:CDS |
| AGCACTCCAGACATAGCTAA+AGG | 0.582825 | contig409end:+37218 | MsG0080048738.01.T01:CDS |
| GTCTCATGATGGCCTTTACA+GGG | 0.582962 | contig409end:+36835 | MsG0080048738.01.T01:CDS |
| TCGATGTGTCTAAAGTTGAC+TGG | 0.584614 | contig409end:+36090 | MsG0080048738.01.T01:CDS |
| TGAGAACTCTTTGATATGAG+AGG | 0.591088 | contig409end:-35708 | MsG0080048738.01.T01:intergenic |
| AAGTTGCCAAATTTCAGCAA+GGG | 0.593702 | contig409end:+36328 | MsG0080048738.01.T01:CDS |
| TTGGGTCCAACGGTAGCTCA+AGG | 0.599883 | contig409end:+37258 | MsG0080048738.01.T01:CDS |
| TTGCTATAGATTCAATGCAA+CGG | 0.601629 | contig409end:-36055 | MsG0080048738.01.T01:intergenic |
| AAAGTTGCCAAATTTCAGCA+AGG | 0.602734 | contig409end:+36327 | MsG0080048738.01.T01:CDS |
| CGATGGTGCGGGGACAGCTG+AGG | 0.604044 | contig409end:+37309 | MsG0080048738.01.T01:CDS |
| GAGAATTGGTCAGCAACTAG+AGG | 0.607732 | contig409end:+36515 | MsG0080048738.01.T01:intron |
| AAACTTAGCACATATCTCAA+AGG | 0.610871 | contig409end:-35811 | MsG0080048738.01.T01:intergenic |
| GTGAGGATGTGTCAAAGCAT+CGG | 0.618211 | contig409end:+36362 | MsG0080048738.01.T01:CDS |
| ACCTGCACAATTACACGTGT+CGG | 0.621274 | contig409end:-37152 | MsG0080048738.01.T01:intergenic |
| ATACCTTGTTGAAATTGCGA+AGG | 0.627461 | contig409end:+36748 | MsG0080048738.01.T01:CDS |
| CTGTAAAGGCCATCATGAGA+CGG | 0.630996 | contig409end:-36833 | MsG0080048738.01.T01:intergenic |
| AATTGGTCAGCAACTAGAGG+AGG | 0.631005 | contig409end:+36518 | MsG0080048738.01.T01:intron |
| GAATATGACACGATGGTGCG+GGG | 0.644492 | contig409end:+37299 | MsG0080048738.01.T01:CDS |
| TGCATGCAGTGCAAAACGAG+AGG | 0.647697 | contig409end:+37126 | MsG0080048738.01.T01:CDS |
| GATCCTTCGCAATTTCAACA+AGG | 0.647912 | contig409end:-36751 | MsG0080048738.01.T01:intergenic |
| CAAATTTCAGACATTCCTGG+TGG | 0.649529 | contig409end:+35780 | MsG0080048738.01.T01:CDS |
| GAGCACCCTGGTATCAGCAA+AGG | 0.656688 | contig409end:+37044 | MsG0080048738.01.T01:CDS |
| AGATATTATTGTCTGCATAG+GGG | 0.671630 | contig409end:+35096 | MsG0080048738.01.T01:CDS |
| CAAGGGTATGATCCCATGTG+AGG | 0.680645 | contig409end:+36345 | MsG0080048738.01.T01:CDS |
| GAAACACTACAGGAGCACCC+TGG | 0.682303 | contig409end:+37032 | MsG0080048738.01.T01:intron |
| AGATTAACAAAATCCAACAA+TGG | 0.687270 | contig409end:-36782 | MsG0080048738.01.T01:intergenic |
| TAATCCGGAATATGACACGA+TGG | 0.703068 | contig409end:+37292 | MsG0080048738.01.T01:CDS |
| GAAATGTGCCAAAGACTGGT+GGG | 0.704918 | contig409end:+36186 | MsG0080048738.01.T01:CDS |
| GCTAGTACCCGATGACGCAG+CGG | 0.707239 | contig409end:-37198 | MsG0080048738.01.T01:intergenic |
| GCTTTGACACATCCTCACAT+GGG | 0.720284 | contig409end:-36357 | MsG0080048738.01.T01:intergenic |
| GCGTCGTTGAGACAAAGCAA+CGG | 0.727282 | contig409end:+37356 | MsG0080048738.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGCTATTAAATTTATT+AGG | - | contig409end:35170-35189 | MsG0080048738.01.T01:intergenic | 10.0% |
| !!! | TAAACAATTAGTTTATTATT+AGG | - | contig409end:35396-35415 | MsG0080048738.01.T01:intergenic | 10.0% |
| !! | AAACTACAAATAAAAAGATT+TGG | - | contig409end:35688-35707 | MsG0080048738.01.T01:intergenic | 15.0% |
| !! | AAATATTAAAAGAAACTGTT+GGG | - | contig409end:34290-34309 | MsG0080048738.01.T01:intergenic | 15.0% |
| !! | TTATGCAAATTTCTTATATT+AGG | - | contig409end:34251-34270 | MsG0080048738.01.T01:intergenic | 15.0% |
| !!! | ATTTTTAGTGATTAAGAAAA+TGG | + | contig409end:34400-34419 | MsG0080048738.01.T01:intron | 15.0% |
| !!! | TATTAGGATTTTTTTTCATT+GGG | - | contig409end:35380-35399 | MsG0080048738.01.T01:intergenic | 15.0% |
| !!! | TTATTAGGATTTTTTTTCAT+TGG | - | contig409end:35381-35400 | MsG0080048738.01.T01:intergenic | 15.0% |
| !!! | TTTTAATATTTCTTCACTAT+TGG | + | contig409end:34299-34318 | MsG0080048738.01.T01:intron | 15.0% |
| !! | AAAAATACTTGAAATCCAAA+AGG | - | contig409end:35288-35307 | MsG0080048738.01.T01:intergenic | 20.0% |
| !! | AATCTTCTATATTTGAAAAG+GGG | - | contig409end:34893-34912 | MsG0080048738.01.T01:intergenic | 20.0% |
| !! | ACAAAATTAATCTTTCTGAA+AGG | + | contig409end:34469-34488 | MsG0080048738.01.T01:intron | 20.0% |
| !! | ATTCAATCTAATGATGTAAT+TGG | + | contig409end:36277-36296 | MsG0080048738.01.T01:intron | 20.0% |
| !! | ATTTCTTATATTAGGAACAA+AGG | - | contig409end:34243-34262 | MsG0080048738.01.T01:intergenic | 20.0% |
| !! | CAATCTTCTATATTTGAAAA+GGG | - | contig409end:34894-34913 | MsG0080048738.01.T01:intergenic | 20.0% |
| !! | CTATTAAATTTATTAGGCAT+TGG | - | contig409end:35164-35183 | MsG0080048738.01.T01:intergenic | 20.0% |
| !! | GAAATATTAAAAGAAACTGT+TGG | - | contig409end:34291-34310 | MsG0080048738.01.T01:intergenic | 20.0% |
| !! | GTCTAATTGAAAAGTAATAA+TGG | - | contig409end:34861-34880 | MsG0080048738.01.T01:intergenic | 20.0% |
| !! | TATAACAAATATCAAAACCA+AGG | + | contig409end:36252-36271 | MsG0080048738.01.T01:intron | 20.0% |
| !! | TATAGTACAGAAAATTGTAA+GGG | + | contig409end:36601-36620 | MsG0080048738.01.T01:intron | 20.0% |
| !! | TCTCTATACTGAATTTAAAA+TGG | - | contig409end:36921-36940 | MsG0080048738.01.T01:intergenic | 20.0% |
| !!! | AAAATTGATGGATAAATAGA+AGG | - | contig409end:34657-34676 | MsG0080048738.01.T01:intergenic | 20.0% |
| !!! | AAATTTCATTCCTTTTATTG+TGG | - | contig409end:35248-35267 | MsG0080048738.01.T01:intergenic | 20.0% |
| !!! | CTTTTCAAATATAGAAGATT+GGG | + | contig409end:34893-34912 | MsG0080048738.01.T01:intron | 20.0% |
| ! | AAATCCAACAATGGTAAATT+AGG | - | contig409end:36776-36795 | MsG0080048738.01.T01:intergenic | 25.0% |
| ! | AGAACAAACTATCTAAAAAG+AGG | - | contig409end:35029-35048 | MsG0080048738.01.T01:intergenic | 25.0% |
| ! | AGATTAACAAAATCCAACAA+TGG | - | contig409end:36785-36804 | MsG0080048738.01.T01:intergenic | 25.0% |
| ! | AGATTTATGAAAATCTGGTT+TGG | + | contig409end:35551-35570 | MsG0080048738.01.T01:intron | 25.0% |
| ! | ATAATGCTTGATCTAAATGA+AGG | + | contig409end:34519-34538 | MsG0080048738.01.T01:intron | 25.0% |
| ! | ATCATTAGATTGAATTTCCT+TGG | - | contig409end:36272-36291 | MsG0080048738.01.T01:intergenic | 25.0% |
| ! | ATTACTTGAAATTCATTGTC+AGG | + | contig409end:35580-35599 | MsG0080048738.01.T01:intron | 25.0% |
| ! | CCAATCTTCTATATTTGAAA+AGG | - | contig409end:34895-34914 | MsG0080048738.01.T01:intergenic | 25.0% |
| ! | GAACAAACTATCTAAAAAGA+GGG | - | contig409end:35028-35047 | MsG0080048738.01.T01:intergenic | 25.0% |
| ! | GTATAGTACAGAAAATTGTA+AGG | + | contig409end:36600-36619 | MsG0080048738.01.T01:intron | 25.0% |
| ! | TGTCAAAATCTCAACTAAAT+GGG | + | contig409end:35495-35514 | MsG0080048738.01.T01:intron | 25.0% |
| ! | TTGTCAAAATCTCAACTAAA+TGG | + | contig409end:35494-35513 | MsG0080048738.01.T01:intron | 25.0% |
| !! | ATTTATCATCTTTTGCCTTT+TGG | + | contig409end:35270-35289 | MsG0080048738.01.T01:intron | 25.0% |
| !! | CCTTTTCAAATATAGAAGAT+TGG | + | contig409end:34892-34911 | MsG0080048738.01.T01:intron | 25.0% |
| !! | GATGTTTTCTTCATTATTGA+GGG | - | contig409end:35751-35770 | MsG0080048738.01.T01:intergenic | 25.0% |
| !! | TACAAAGTTTTACTTACACA+AGG | + | contig409end:35120-35139 | MsG0080048738.01.T01:CDS | 25.0% |
| !! | TGACAATGAATTTCAAGTAA+TGG | - | contig409end:35581-35600 | MsG0080048738.01.T01:intergenic | 25.0% |
| !!! | AACAGTAATTTAAGCATTGA+AGG | - | contig409end:34680-34699 | MsG0080048738.01.T01:intergenic | 25.0% |
| !!! | TTCAAAGCATTTTAGTGTAA+CGG | - | contig409end:37015-37034 | MsG0080048738.01.T01:intergenic | 25.0% |
| AAACATCGATCTTGAAAAGA+AGG | - | contig409end:35935-35954 | MsG0080048738.01.T01:intergenic | 30.0% | |
| AAACTTAGCACATATCTCAA+AGG | - | contig409end:35814-35833 | MsG0080048738.01.T01:intergenic | 30.0% | |
| AACATACTAAGACACAACAA+TGG | - | contig409end:36952-36971 | MsG0080048738.01.T01:intergenic | 30.0% | |
| ACCTTATTAAGGATCAGAAA+TGG | + | contig409end:35451-35470 | MsG0080048738.01.T01:intron | 30.0% | |
| AGATATTATTGTCTGCATAG+GGG | + | contig409end:35096-35115 | MsG0080048738.01.T01:CDS | 30.0% | |
| ATATAACCGAAAAAAGCTTC+CGG | + | contig409end:36121-36140 | MsG0080048738.01.T01:CDS | 30.0% | |
| ATGCATGAAAACATTGAGAA+AGG | + | contig409end:35906-35925 | MsG0080048738.01.T01:CDS | 30.0% | |
| ATTCAAATTTCAGACATTCC+TGG | + | contig409end:35777-35796 | MsG0080048738.01.T01:CDS | 30.0% | |
| CAAAAAAAGGAAGACGAAAA+AGG | - | contig409end:34439-34458 | MsG0080048738.01.T01:intergenic | 30.0% | |
| CAGATATTATTGTCTGCATA+GGG | + | contig409end:35095-35114 | MsG0080048738.01.T01:CDS | 30.0% | |
| CATAATGCATGACCTTATTA+AGG | + | contig409end:35440-35459 | MsG0080048738.01.T01:intron | 30.0% | |
| CATTGAATCTATAGCAAACA+AGG | + | contig409end:36061-36080 | MsG0080048738.01.T01:CDS | 30.0% | |
| CATTGCATAAAGTAGAAAAG+CGG | - | contig409end:34366-34385 | MsG0080048738.01.T01:intergenic | 30.0% | |
| GAGATTACAATGTATGATGT+TGG | + | contig409end:36578-36597 | MsG0080048738.01.T01:CDS | 30.0% | |
| GCTGTTATTGGAAAAATGAA+GGG | + | contig409end:37428-37447 | MsG0080048738.01.T01:CDS | 30.0% | |
| GGGTTAGATTTATGAAAATC+TGG | + | contig409end:35546-35565 | MsG0080048738.01.T01:intron | 30.0% | |
| GTTGTTAAGTTCTTTCACAT+CGG | - | contig409end:34777-34796 | MsG0080048738.01.T01:intergenic | 30.0% | |
| TATTAAGGATCAGAAATGGA+AGG | + | contig409end:35455-35474 | MsG0080048738.01.T01:intron | 30.0% | |
| TCAGATATTATTGTCTGCAT+AGG | + | contig409end:35094-35113 | MsG0080048738.01.T01:CDS | 30.0% | |
| TCCATTTCTGATCCTTAATA+AGG | - | contig409end:35455-35474 | MsG0080048738.01.T01:intergenic | 30.0% | |
| TTGAAATTCATTGTCAGGTT+GGG | + | contig409end:35585-35604 | MsG0080048738.01.T01:intron | 30.0% | |
| TTGCTATAGATTCAATGCAA+CGG | - | contig409end:36058-36077 | MsG0080048738.01.T01:intergenic | 30.0% | |
| ! | ATATGTGCTAAGTTTTGCTA+CGG | + | contig409end:35819-35838 | MsG0080048738.01.T01:CDS | 30.0% |
| ! | ATTCCTTTTATTGTGGTGTA+AGG | - | contig409end:35241-35260 | MsG0080048738.01.T01:intergenic | 30.0% |
| ! | CGATGTTTTCTTCATTATTG+AGG | - | contig409end:35752-35771 | MsG0080048738.01.T01:intergenic | 30.0% |
| ! | TTCCTTTTATTGTGGTGTAA+GGG | - | contig409end:35240-35259 | MsG0080048738.01.T01:intergenic | 30.0% |
| !! | AAAATGCTTTGAAACACTAC+AGG | + | contig409end:37022-37041 | MsG0080048738.01.T01:intron | 30.0% |
| !! | AAGCATTGAAGGAAAATTGA+TGG | - | contig409end:34669-34688 | MsG0080048738.01.T01:intergenic | 30.0% |
| !! | AATCACATTGTAAGCATTGA+GGG | - | contig409end:35856-35875 | MsG0080048738.01.T01:intergenic | 30.0% |
| !! | ATTTATTAGGCATTGGTAGA+AGG | - | contig409end:35157-35176 | MsG0080048738.01.T01:intergenic | 30.0% |
| !! | CTTTTTCGTCTTCCTTTTTT+TGG | + | contig409end:34437-34456 | MsG0080048738.01.T01:intron | 30.0% |
| !! | TAGTTGAGATTTTGACAACT+AGG | - | contig409end:35492-35511 | MsG0080048738.01.T01:intergenic | 30.0% |
| !! | TTCTTTGAAGCTGTCTTTAT+TGG | + | contig409end:34812-34831 | MsG0080048738.01.T01:intron | 30.0% |
| !!! | ATTTTGATTAAAGCACCAGA+TGG | + | contig409end:36554-36573 | MsG0080048738.01.T01:CDS | 30.0% |
| AAAAAGCTTCCGGAAGAAAA+TGG | + | contig409end:36131-36150 | MsG0080048738.01.T01:CDS | 35.0% | |
| AAAAGAGTAGAACCCTAGAA+TGG | - | contig409end:34978-34997 | MsG0080048738.01.T01:intergenic | 35.0% | |
| AAAGTTGCCAAATTTCAGCA+AGG | + | contig409end:36327-36346 | MsG0080048738.01.T01:CDS | 35.0% | |
| AACATGGATAAGGCTGTTAT+TGG | + | contig409end:37416-37435 | MsG0080048738.01.T01:CDS | 35.0% | |
| AAGACTTTGTAGTCTGAAGA+AGG | - | contig409end:36001-36020 | MsG0080048738.01.T01:intergenic | 35.0% | |
| AAGCGGAAATCAAAACTAGT+AGG | - | contig409end:34349-34368 | MsG0080048738.01.T01:intergenic | 35.0% | |
| AAGTTGCCAAATTTCAGCAA+GGG | + | contig409end:36328-36347 | MsG0080048738.01.T01:CDS | 35.0% | |
| AATTCCGAGATTGAATTGGT+TGG | + | contig409end:36644-36663 | MsG0080048738.01.T01:intron | 35.0% | |
| ACGTGCAGTGAGTTTAAATT+GGG | + | contig409end:35526-35545 | MsG0080048738.01.T01:intron | 35.0% | |
| ATACCTTGTTGAAATTGCGA+AGG | + | contig409end:36748-36767 | MsG0080048738.01.T01:CDS | 35.0% | |
| ATAGCCATGAAGAACATAGA+AGG | - | contig409end:34501-34520 | MsG0080048738.01.T01:intergenic | 35.0% | |
| ATCATACCCTTGCTGAAATT+TGG | - | contig409end:36337-36356 | MsG0080048738.01.T01:intergenic | 35.0% | |
| ATGAAGGATACACATACATG+CGG | + | contig409end:34535-34554 | MsG0080048738.01.T01:intron | 35.0% | |
| ATGGTTGCAAAACTCATAGA+TGG | + | contig409end:36725-36744 | MsG0080048738.01.T01:CDS | 35.0% | |
| CAGATACATTTCAGACTGAT+GGG | + | contig409end:34088-34107 | MsG0080048738.01.T01:CDS | 35.0% | |
| CATTGGGATTTATCATCACA+TGG | - | contig409end:35364-35383 | MsG0080048738.01.T01:intergenic | 35.0% | |
| CTTACAATGTGATTGCTACT+AGG | + | contig409end:35862-35881 | MsG0080048738.01.T01:CDS | 35.0% | |
| CTTGAAATTCATTGTCAGGT+TGG | + | contig409end:35584-35603 | MsG0080048738.01.T01:intron | 35.0% | |
| GATGTGCTAGTAAAGAGAAT+TGG | + | contig409end:36501-36520 | MsG0080048738.01.T01:intron | 35.0% | |
| GGATCCTAATTTACCATTGT+TGG | + | contig409end:36769-36788 | MsG0080048738.01.T01:CDS | 35.0% | |
| GGCTATTGACACATATTTGA+AGG | + | contig409end:36856-36875 | MsG0080048738.01.T01:CDS | 35.0% | |
| GGCTGTTATTGGAAAAATGA+AGG | + | contig409end:37427-37446 | MsG0080048738.01.T01:CDS | 35.0% | |
| GTTGGAAACAGTTTCAAAGA+TGG | + | contig409end:37380-37399 | MsG0080048738.01.T01:CDS | 35.0% | |
| TACAAAGTCTTTGTCACCAT+TGG | + | contig409end:36010-36029 | MsG0080048738.01.T01:CDS | 35.0% | |
| TACATTGTAATCTCTCCATC+TGG | - | contig409end:36572-36591 | MsG0080048738.01.T01:intergenic | 35.0% | |
| TACGAAAAATGCTAGAGCTT+AGG | - | contig409end:35959-35978 | MsG0080048738.01.T01:intergenic | 35.0% | |
| TCACAATTCCGAGATTGAAT+TGG | + | contig409end:36640-36659 | MsG0080048738.01.T01:intron | 35.0% | |
| TCTGTAAGCATAAGCTTTCA+AGG | - | contig409end:36308-36327 | MsG0080048738.01.T01:intergenic | 35.0% | |
| TGAGAACTCTTTGATATGAG+AGG | - | contig409end:35711-35730 | MsG0080048738.01.T01:intergenic | 35.0% | |
| TGCTAAACCAAACATGGATA+AGG | + | contig409end:37406-37425 | MsG0080048738.01.T01:CDS | 35.0% | |
| TGTAGTCTGAAGAAGGATAA+TGG | - | contig409end:35994-36013 | MsG0080048738.01.T01:intergenic | 35.0% | |
| TTCCCTTACACCACAATAAA+AGG | + | contig409end:35235-35254 | MsG0080048738.01.T01:intron | 35.0% | |
| TTGATTCCTTTAGCTATGTC+TGG | - | contig409end:37227-37246 | MsG0080048738.01.T01:intergenic | 35.0% | |
| ! | ATAACAGCCTTATCCATGTT+TGG | - | contig409end:37416-37435 | MsG0080048738.01.T01:intergenic | 35.0% |
| ! | CAATCACATTGTAAGCATTG+AGG | - | contig409end:35857-35876 | MsG0080048738.01.T01:intergenic | 35.0% |
| ! | TAGCATTTTTCGTAGTTGGA+AGG | + | contig409end:35965-35984 | MsG0080048738.01.T01:CDS | 35.0% |
| !! | GAGGATTAAAGGCATTAAGA+AGG | + | contig409end:37328-37347 | MsG0080048738.01.T01:CDS | 35.0% |
| !!! | TTCGTCTTCCTTTTTTTGGT+TGG | + | contig409end:34441-34460 | MsG0080048738.01.T01:intron | 35.0% |
| !!! | TTTCTTCCGGAAGCTTTTTT+CGG | - | contig409end:36130-36149 | MsG0080048738.01.T01:intergenic | 35.0% |
| ACATACATGCGGAGAAATGT+AGG | + | contig409end:34546-34565 | MsG0080048738.01.T01:intron | 40.0% | |
| ACATGAAACACTGCCTTTCT+CGG | - | contig409end:36421-36440 | MsG0080048738.01.T01:intergenic | 40.0% | |
| ACCTCCAACCAATTCAATCT+CGG | - | contig409end:36651-36670 | MsG0080048738.01.T01:intergenic | 40.0% | |
| AGAAAGGCAGTGTTTCATGT+AGG | + | contig409end:36421-36440 | MsG0080048738.01.T01:CDS | 40.0% | |
| ATGTGTCAATAGCCCTGTAA+AGG | - | contig409end:36850-36869 | MsG0080048738.01.T01:intergenic | 40.0% | |
| CAAATTTCAGACATTCCTGG+TGG | + | contig409end:35780-35799 | MsG0080048738.01.T01:CDS | 40.0% | |
| CACGTGCAGTGAGTTTAAAT+TGG | + | contig409end:35525-35544 | MsG0080048738.01.T01:intron | 40.0% | |
| CCAGATACATTTCAGACTGA+TGG | + | contig409end:34087-34106 | MsG0080048738.01.T01:CDS | 40.0% | |
| CTGATGGGAACAACAATGTT+AGG | + | contig409end:34103-34122 | MsG0080048738.01.T01:CDS | 40.0% | |
| GAATCAAAGACCTGAGCATT+GGG | + | contig409end:37240-37259 | MsG0080048738.01.T01:CDS | 40.0% | |
| GATCCTTCGCAATTTCAACA+AGG | - | contig409end:36754-36773 | MsG0080048738.01.T01:intergenic | 40.0% | |
| TAATCCGGAATATGACACGA+TGG | + | contig409end:37292-37311 | MsG0080048738.01.T01:CDS | 40.0% | |
| TGAATGTACAAGTCCTAGTC+AGG | - | contig409end:34604-34623 | MsG0080048738.01.T01:intergenic | 40.0% | |
| TGGAGATGCTAAACCAAACA+TGG | + | contig409end:37400-37419 | MsG0080048738.01.T01:CDS | 40.0% | |
| TGTCATCGCCAACCAAAAAA+AGG | - | contig409end:34452-34471 | MsG0080048738.01.T01:intergenic | 40.0% | |
| TTATTGTTGCTGACCTGACT+AGG | + | contig409end:34588-34607 | MsG0080048738.01.T01:intron | 40.0% | |
| TTGATCTAGCCACCATTCTA+GGG | + | contig409end:34963-34982 | MsG0080048738.01.T01:intron | 40.0% | |
| TTTCACCTTTGCTGATACCA+GGG | - | contig409end:37052-37071 | MsG0080048738.01.T01:intergenic | 40.0% | |
| ! | ACTTTGAAGGGATAGAAAGC+CGG | + | contig409end:36676-36695 | MsG0080048738.01.T01:intron | 40.0% |
| ! | AGTCTGAAATGTATCTGGCT+TGG | - | contig409end:34085-34104 | MsG0080048738.01.T01:intergenic | 40.0% |
| ! | AGTTCTAACTCCATTCTGGT+TGG | - | contig409end:36165-36184 | MsG0080048738.01.T01:intergenic | 40.0% |
| ! | CCATCAGTCTGAAATGTATC+TGG | - | contig409end:34090-34109 | MsG0080048738.01.T01:intergenic | 40.0% |
| ! | GAAGAGTATATGCCAGCTAA+TGG | + | contig409end:37073-37092 | MsG0080048738.01.T01:CDS | 40.0% |
| ! | GCTCTAGCATTTTTCGTAGT+TGG | + | contig409end:35961-35980 | MsG0080048738.01.T01:CDS | 40.0% |
| ! | TCGATGTGTCTAAAGTTGAC+TGG | + | contig409end:36090-36109 | MsG0080048738.01.T01:CDS | 40.0% |
| ! | TTCGAGTTCTAACTCCATTC+TGG | - | contig409end:36169-36188 | MsG0080048738.01.T01:intergenic | 40.0% |
| ! | TTTTCACCTTTGCTGATACC+AGG | - | contig409end:37053-37072 | MsG0080048738.01.T01:intergenic | 40.0% |
| ! | TTTTGCAACCATCAGCTTAG+AGG | - | contig409end:36717-36736 | MsG0080048738.01.T01:intergenic | 40.0% |
| !! | GACTCAAAGCCATTTTCTTC+CGG | - | contig409end:36143-36162 | MsG0080048738.01.T01:intergenic | 40.0% |
| AAGGTCGGGAACAACTAATC+CGG | + | contig409end:37277-37296 | MsG0080048738.01.T01:CDS | 45.0% | |
| AATTGGTCAGCAACTAGAGG+AGG | + | contig409end:36518-36537 | MsG0080048738.01.T01:intron | 45.0% | |
| ACCATTGGATGAGGAGCAAA+AGG | + | contig409end:36025-36044 | MsG0080048738.01.T01:CDS | 45.0% | |
| ACCTGCACAATTACACGTGT+CGG | - | contig409end:37155-37174 | MsG0080048738.01.T01:intergenic | 45.0% | |
| ACTCGAAATGTGCCAAAGAC+TGG | + | contig409end:36182-36201 | MsG0080048738.01.T01:CDS | 45.0% | |
| AGAGTAGAACCCTAGAATGG+TGG | - | contig409end:34975-34994 | MsG0080048738.01.T01:intergenic | 45.0% | |
| AGCACTCCAGACATAGCTAA+AGG | + | contig409end:37218-37237 | MsG0080048738.01.T01:CDS | 45.0% | |
| ATCAGATGCCTCTAAGCTGA+TGG | + | contig409end:36706-36725 | MsG0080048738.01.T01:intron | 45.0% | |
| ATCTTCAACCCACCAGTCTT+TGG | - | contig409end:36197-36216 | MsG0080048738.01.T01:intergenic | 45.0% | |
| CAGGTATGTTGCAAGTGAGT+TGG | + | contig409end:35069-35088 | MsG0080048738.01.T01:intron | 45.0% | |
| CTGTAAAGGCCATCATGAGA+CGG | - | contig409end:36836-36855 | MsG0080048738.01.T01:intergenic | 45.0% | |
| CTTGATCTAGCCACCATTCT+AGG | + | contig409end:34962-34981 | MsG0080048738.01.T01:intron | 45.0% | |
| GAAATGTGCCAAAGACTGGT+GGG | + | contig409end:36186-36205 | MsG0080048738.01.T01:CDS | 45.0% | |
| GAGAATTGGTCAGCAACTAG+AGG | + | contig409end:36515-36534 | MsG0080048738.01.T01:intron | 45.0% | |
| GAGATTGAATTGGTTGGAGG+TGG | + | contig409end:36650-36669 | MsG0080048738.01.T01:intron | 45.0% | |
| GCCATGAAGAACATAGAAGG+CGG | - | contig409end:34498-34517 | MsG0080048738.01.T01:intergenic | 45.0% | |
| GCTTTCTGCAATCCATTAGC+TGG | - | contig409end:37088-37107 | MsG0080048738.01.T01:intergenic | 45.0% | |
| GCTTTGACACATCCTCACAT+GGG | - | contig409end:36360-36379 | MsG0080048738.01.T01:intergenic | 45.0% | |
| GGAATCAAAGACCTGAGCAT+TGG | + | contig409end:37239-37258 | MsG0080048738.01.T01:CDS | 45.0% | |
| GTCTCATGATGGCCTTTACA+GGG | + | contig409end:36835-36854 | MsG0080048738.01.T01:CDS | 45.0% | |
| GTCTTTGTCACCATTGGATG+AGG | + | contig409end:36016-36035 | MsG0080048738.01.T01:CDS | 45.0% | |
| GTGAGGATGTGTCAAAGCAT+CGG | + | contig409end:36362-36381 | MsG0080048738.01.T01:CDS | 45.0% | |
| TCCGAGATTGAATTGGTTGG+AGG | + | contig409end:36647-36666 | MsG0080048738.01.T01:intron | 45.0% | |
| TCCGCCTTCTATGTTCTTCA+TGG | + | contig409end:34494-34513 | MsG0080048738.01.T01:intron | 45.0% | |
| TGCTTTGACACATCCTCACA+TGG | - | contig409end:36361-36380 | MsG0080048738.01.T01:intergenic | 45.0% | |
| TTGAGACAAAGCAACGGAGT+TGG | + | contig409end:37362-37381 | MsG0080048738.01.T01:CDS | 45.0% | |
| TTTGAAGGGATAGAAAGCCG+GGG | + | contig409end:36678-36697 | MsG0080048738.01.T01:intron | 45.0% | |
| ! | ACCTTTTGCTCCTCATCCAA+TGG | - | contig409end:36029-36048 | MsG0080048738.01.T01:intergenic | 45.0% |
| ! | ATCACATGGCTTTTCAGCAC+AGG | - | contig409end:35350-35369 | MsG0080048738.01.T01:intergenic | 45.0% |
| ! | CTTTGAAGGGATAGAAAGCC+GGG | + | contig409end:36677-36696 | MsG0080048738.01.T01:intron | 45.0% |
| ! | GAGGCATCTGATAAAATCCC+CGG | - | contig409end:36698-36717 | MsG0080048738.01.T01:intergenic | 45.0% |
| ! | TGGCTTTTCAGCACAGGTTA+AGG | - | contig409end:35344-35363 | MsG0080048738.01.T01:intergenic | 45.0% |
| ACAAGATGCCTTTCATGCGC+AGG | + | contig409end:35050-35069 | MsG0080048738.01.T01:intron | 50.0% | |
| ACCGACACGTGTAATTGTGC+AGG | + | contig409end:37151-37170 | MsG0080048738.01.T01:CDS | 50.0% | |
| ATCTCTCGTCCGTCTCATGA+TGG | + | contig409end:36824-36843 | MsG0080048738.01.T01:CDS | 50.0% | |
| CGAAATGTGCCAAAGACTGG+TGG | + | contig409end:36185-36204 | MsG0080048738.01.T01:CDS | 50.0% | |
| CGCACCATCGTGTCATATTC+CGG | - | contig409end:37299-37318 | MsG0080048738.01.T01:intergenic | 50.0% | |
| CGGAATATGACACGATGGTG+CGG | + | contig409end:37297-37316 | MsG0080048738.01.T01:CDS | 50.0% | |
| CGTCTCATGATGGCCTTTAC+AGG | + | contig409end:36834-36853 | MsG0080048738.01.T01:CDS | 50.0% | |
| GAAACACTGCCTTTCTCGGA+AGG | - | contig409end:36417-36436 | MsG0080048738.01.T01:intergenic | 50.0% | |
| GAATATGACACGATGGTGCG+GGG | + | contig409end:37299-37318 | MsG0080048738.01.T01:CDS | 50.0% | |
| GCAACATACCTGCGCATGAA+AGG | - | contig409end:35061-35080 | MsG0080048738.01.T01:intergenic | 50.0% | |
| GCAGGTACTACATTTCGAGC+AGG | + | contig409end:37169-37188 | MsG0080048738.01.T01:CDS | 50.0% | |
| GCGTCGTTGAGACAAAGCAA+CGG | + | contig409end:37356-37375 | MsG0080048738.01.T01:CDS | 50.0% | |
| GGAATATGACACGATGGTGC+GGG | + | contig409end:37298-37317 | MsG0080048738.01.T01:CDS | 50.0% | |
| TCAGCAACTAGAGGAGGCTT+CGG | + | contig409end:36524-36543 | MsG0080048738.01.T01:intron | 50.0% | |
| TGCATGCAGTGCAAAACGAG+AGG | + | contig409end:37126-37145 | MsG0080048738.01.T01:CDS | 50.0% | |
| TGGAGGTGGCGAACTTTGAA+GGG | + | contig409end:36664-36683 | MsG0080048738.01.T01:intron | 50.0% | |
| TTGGAGGTGGCGAACTTTGA+AGG | + | contig409end:36663-36682 | MsG0080048738.01.T01:intron | 50.0% | |
| ! | AGGTGTGCAGCAGAGTATCT+TGG | + | contig409end:35882-35901 | MsG0080048738.01.T01:CDS | 50.0% |
| ! | CAAGGGTATGATCCCATGTG+AGG | + | contig409end:36345-36364 | MsG0080048738.01.T01:CDS | 50.0% |
| ! | CTCGTTTTGCACTGCATGCA+AGG | - | contig409end:37126-37145 | MsG0080048738.01.T01:intergenic | 50.0% |
| !! | GAAGTGTTGCCTTCCGAGAA+AGG | + | contig409end:36405-36424 | MsG0080048738.01.T01:CDS | 50.0% |
| !! | GGCTTTGAGTCCAACCAGAA+TGG | + | contig409end:36152-36171 | MsG0080048738.01.T01:CDS | 50.0% |
| ACATCGGTCGTACACGAGCA+TGG | - | contig409end:34761-34780 | MsG0080048738.01.T01:intergenic | 55.0% | |
| CGGGGACAGCTGAGGATTAA+AGG | + | contig409end:37317-37336 | MsG0080048738.01.T01:CDS | 55.0% | |
| GAGCACCCTGGTATCAGCAA+AGG | + | contig409end:37044-37063 | MsG0080048738.01.T01:CDS | 55.0% | |
| GTCCAACGGTAGCTCAAGGT+CGG | + | contig409end:37262-37281 | MsG0080048738.01.T01:CDS | 55.0% | |
| TACCGTTGGACCCAATGCTC+AGG | - | contig409end:37253-37272 | MsG0080048738.01.T01:intergenic | 55.0% | |
| TCCAACGGTAGCTCAAGGTC+GGG | + | contig409end:37263-37282 | MsG0080048738.01.T01:CDS | 55.0% | |
| TTGGGTCCAACGGTAGCTCA+AGG | + | contig409end:37258-37277 | MsG0080048738.01.T01:CDS | 55.0% | |
| !! | GAAACACTACAGGAGCACCC+TGG | + | contig409end:37032-37051 | MsG0080048738.01.T01:intron | 55.0% |
| !! | GACCTGAGCATTGGGTCCAA+CGG | + | contig409end:37248-37267 | MsG0080048738.01.T01:CDS | 55.0% |
| !! | TCAAAGGCACTTGCACCACC+AGG | - | contig409end:35798-35817 | MsG0080048738.01.T01:intergenic | 55.0% |
| GCTAGTACCCGATGACGCAG+CGG | - | contig409end:37201-37220 | MsG0080048738.01.T01:intergenic | 60.0% | |
| GGTCAGAACCGCTGCGTCAT+CGG | + | contig409end:37190-37209 | MsG0080048738.01.T01:CDS | 60.0% | |
| GTCAGAACCGCTGCGTCATC+GGG | + | contig409end:37191-37210 | MsG0080048738.01.T01:CDS | 60.0% | |
| TCCCGACCTTGAGCTACCGT+TGG | - | contig409end:37267-37286 | MsG0080048738.01.T01:intergenic | 60.0% | |
| CGATGGTGCGGGGACAGCTG+AGG | + | contig409end:37309-37328 | MsG0080048738.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig409end | gene | 34060 | 37457 | 34060 | ID=MsG0080048738.01;Name=MsG0080048738.01 |
| contig409end | mRNA | 34060 | 37457 | 34060 | ID=MsG0080048738.01.T01;Parent=MsG0080048738.01;Name=MsG0080048738.01.T01;_AED=0.13;_eAED=0.15;_QI=0|0|0|1|1|1|7|0|482 |
| contig409end | exon | 34060 | 34124 | 34060 | ID=MsG0080048738.01.T01:exon:23071;Parent=MsG0080048738.01.T01 |
| contig409end | exon | 35072 | 35141 | 35072 | ID=MsG0080048738.01.T01:exon:23070;Parent=MsG0080048738.01.T01 |
| contig409end | exon | 35705 | 36249 | 35705 | ID=MsG0080048738.01.T01:exon:23069;Parent=MsG0080048738.01.T01 |
| contig409end | exon | 36327 | 36442 | 36327 | ID=MsG0080048738.01.T01:exon:23068;Parent=MsG0080048738.01.T01 |
| contig409end | exon | 36528 | 36599 | 36528 | ID=MsG0080048738.01.T01:exon:23067;Parent=MsG0080048738.01.T01 |
| contig409end | exon | 36711 | 36877 | 36711 | ID=MsG0080048738.01.T01:exon:23066;Parent=MsG0080048738.01.T01 |
| contig409end | exon | 37044 | 37457 | 37044 | ID=MsG0080048738.01.T01:exon:23065;Parent=MsG0080048738.01.T01 |
| contig409end | CDS | 34060 | 34124 | 34060 | ID=MsG0080048738.01.T01:cds;Parent=MsG0080048738.01.T01 |
| contig409end | CDS | 35072 | 35141 | 35072 | ID=MsG0080048738.01.T01:cds;Parent=MsG0080048738.01.T01 |
| contig409end | CDS | 35705 | 36249 | 35705 | ID=MsG0080048738.01.T01:cds;Parent=MsG0080048738.01.T01 |
| contig409end | CDS | 36327 | 36442 | 36327 | ID=MsG0080048738.01.T01:cds;Parent=MsG0080048738.01.T01 |
| contig409end | CDS | 36528 | 36599 | 36528 | ID=MsG0080048738.01.T01:cds;Parent=MsG0080048738.01.T01 |
| contig409end | CDS | 36711 | 36877 | 36711 | ID=MsG0080048738.01.T01:cds;Parent=MsG0080048738.01.T01 |
| contig409end | CDS | 37044 | 37457 | 37044 | ID=MsG0080048738.01.T01:cds;Parent=MsG0080048738.01.T01 |
| Gene Sequence |
| Protein sequence |
