AlfalfaGEDB | MsG0180003421.01

M. sativa cultivar ZhongmuNo.1 / MsG0180003421.01

KEGG: -
GO: -
PFAM: PF03479

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003421.01.T01	XP_003590386.2	82.731	249	19	2	15	263	125	349	5.14E-136	402

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003421.01.T01	Q8VYJ2	45.408	196	74	3	23	218	158	320	1.28E-43	157

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003421.01.T01	A0A396JTT3	82.731	249	19	2	15	263	125	349	2.46e-136	402

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048738.01	MsG0180003421.01	0.804872	1.753742e-49	9.145114e-47
MsG0180001293.01	MsG0180003421.01	0.828070	1.103009e-54	1.084684e-51
MsG0180002397.01	MsG0180003421.01	0.807864	4.104081e-50	2.311329e-47
MsG0180003421.01	MsG0180003857.01	0.820357	7.159259e-53	5.651999e-50
MsG0180003421.01	MsG0180003905.01	0.826763	2.268900e-54	2.147613e-51
MsG0180003421.01	MsG0180004120.01	0.862992	3.419696e-64	1.020819e-60
MsG0180003421.01	MsG0180004185.01	0.802010	6.871545e-49	3.329481e-46
MsG0180003421.01	MsG0180004475.01	0.817894	2.602704e-52	1.919219e-49
MsG0180003421.01	MsG0180004538.01	0.821772	3.380268e-53	2.776106e-50
MsG0180003421.01	MsG0180004583.01	0.830719	2.506918e-55	2.663224e-52
MsG0180003421.01	MsG0180004972.01	0.800625	1.320054e-48	6.175756e-46
MsG0180003421.01	MsG0180005048.01	0.813225	2.850641e-51	1.850716e-48
MsG0180003421.01	MsG0180005655.01	0.803251	3.810633e-49	1.905748e-46
MsG0180003421.01	MsG0180006133.01	0.845819	3.201530e-59	5.402003e-56
MsG0180003421.01	MsG0280006717.01	0.822370	2.457176e-53	2.052821e-50
MsG0180003421.01	MsG0280007003.01	0.833565	4.958223e-56	5.731697e-53
MsG0180003421.01	MsG0280007492.01	0.807741	4.359608e-50	2.447482e-47
MsG0180003421.01	MsG0380014666.01	0.841256	5.305480e-58	7.750799e-55
MsG0180003421.01	MsG0380015219.01	0.801464	8.894688e-49	4.250496e-46
MsG0180003421.01	MsG0380015402.01	0.838198	3.315163e-57	4.407723e-54
MsG0180003421.01	MsG0380016027.01	0.830064	3.623258e-55	3.776255e-52
MsG0180003421.01	MsG0380016091.01	0.827238	1.746836e-54	1.676675e-51
MsG0180003421.01	MsG0380016217.01	0.829437	5.150782e-55	5.271463e-52
MsG0180003421.01	MsG0380016225.01	0.811836	5.734942e-51	3.587449e-48
MsG0180003421.01	MsG0380017128.01	0.812968	3.245736e-51	2.092635e-48
MsG0180003421.01	MsG0380017181.01	0.823261	1.523673e-53	1.305357e-50
MsG0180003421.01	MsG0380017282.01	0.810263	1.257551e-50	7.545330e-48
MsG0180003421.01	MsG0380017332.01	0.883556	4.059985e-71	2.586679e-67
MsG0180003421.01	MsG0380017588.01	0.835233	1.889971e-56	2.297201e-53
MsG0180003421.01	MsG0380017605.01	0.850416	1.722645e-60	3.372094e-57
MsG0180003421.01	MsG0380017632.01	0.804197	2.425215e-49	1.242686e-46
MsG0180003421.01	MsG0380017696.01	0.820789	5.696003e-53	4.551037e-50
MsG0180003421.01	MsG0380017932.01	0.805010	1.640820e-49	8.585802e-47
MsG0180003421.01	MsG0480018228.01	0.815730	7.959087e-52	5.531888e-49
MsG0180003421.01	MsG0480020398.01	0.858374	8.607409e-63	2.191963e-59
MsG0180003421.01	MsG0480020856.01	0.818729	1.683826e-52	1.270547e-49
MsG0180003421.01	MsG0480021301.01	0.852006	6.126000e-61	1.262386e-57
MsG0180003421.01	MsG0480021773.01	0.812054	5.142871e-51	3.235979e-48
MsG0180003421.01	MsG0480021902.01	0.811698	6.145332e-51	3.830012e-48
MsG0180003421.01	MsG0480022307.01	0.812232	4.703065e-51	2.973817e-48
MsG0180003421.01	MsG0480023424.01	0.805469	1.315252e-49	6.963900e-47
MsG0180003421.01	MsG0480023426.01	0.800722	1.261593e-48	5.916599e-46
MsG0180003421.01	MsG0480023484.01	0.807357	5.257408e-50	2.922159e-47
MsG0180003421.01	MsG0480023706.01	0.859600	3.696611e-63	9.816440e-60
MsG0180003421.01	MsG0480024002.01	0.800737	1.252651e-48	5.877038e-46
MsG0180003421.01	MsG0580024787.01	0.811351	7.310836e-51	4.514852e-48
MsG0180003421.01	MsG0580024954.01	0.803186	3.930934e-49	1.962664e-46
MsG0180003421.01	MsG0580025177.01	0.828716	7.703142e-55	7.718293e-52
MsG0180003421.01	MsG0580025504.01	0.807676	4.500022e-50	2.521950e-47
MsG0180003421.01	MsG0580026343.01	0.802747	4.843623e-49	2.391472e-46
MsG0180003421.01	MsG0580026446.01	0.802379	5.770356e-49	2.822501e-46
MsG0180003421.01	MsG0580028927.01	0.809809	1.575103e-50	9.339486e-48
MsG0180003421.01	MsG0580028955.01	0.824021	1.011450e-53	8.852791e-51
MsG0180003421.01	MsG0580029591.01	0.822020	2.961451e-53	2.449190e-50
MsG0180003421.01	MsG0680031006.01	0.803771	2.973629e-49	1.507145e-46
MsG0180003421.01	MsG0680035776.01	0.853060	3.066354e-61	6.541106e-58
MsG0180003421.01	MsG0780038393.01	0.801792	7.618571e-49	3.671031e-46
MsG0180003421.01	MsG0780038445.01	0.805965	1.034756e-49	5.549137e-47
MsG0180003421.01	MsG0780040641.01	0.804934	1.701763e-49	8.888013e-47
MsG0180003421.01	MsG0780040899.01	0.825041	5.818596e-54	5.244275e-51
MsG0180003421.01	MsG0880042833.01	0.809764	1.610762e-50	9.539959e-48
MsG0180003421.01	MsG0880044103.01	0.838896	2.189933e-57	2.974264e-54
MsG0180003421.01	MsG0880045015.01	0.818354	2.048139e-52	1.529655e-49
MsG0180003421.01	MsG0880045356.01	0.832321	1.010498e-55	1.125413e-52
MsG0180003421.01	MsG0880045439.01	0.806984	6.307769e-50	3.472085e-47
MsG0180003421.01	MsG0880045584.01	0.822235	2.639943e-53	2.196891e-50
MsG0180003421.01	MsG0880045612.01	0.829492	4.995430e-55	5.120620e-52
MsG0180003421.01	MsG0880045647.01	0.830140	3.471968e-55	3.626722e-52
MsG0180003421.01	MsG0880046904.01	0.812627	3.853990e-51	2.462702e-48
MsG0180003421.01	MsG0880046905.01	0.805881	1.077423e-49	5.765566e-47
MsG0180003421.01	MsG0880046906.01	0.819599	1.067140e-52	8.248849e-50
MsG0180003421.01	MsG0880047649.01	0.800220	1.596060e-48	7.390780e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003421.01.T01	MTR_1g061530	82.731	249	19	2	15	263	121	345	1.00e-139	401
MsG0180003421.01.T01	MTR_7g074935	45.050	202	77	5	30	231	122	289	6.09e-34	128
MsG0180003421.01.T01	MTR_8g036160	45.641	195	77	4	23	216	130	296	1.30e-33	127
MsG0180003421.01.T01	MTR_4g098460	39.409	203	80	5	35	222	81	255	4.88e-32	122
MsG0180003421.01.T01	MTR_5g011680	40.223	179	86	2	24	202	131	288	2.48e-31	120
MsG0180003421.01.T01	MTR_4g098460	39.801	201	77	5	35	222	81	250	1.13e-30	118
MsG0180003421.01.T01	MTR_8g031100	44.828	174	71	1	23	196	143	291	4.05e-30	118
MsG0180003421.01.T01	MTR_8g098390	39.474	190	80	3	23	203	154	317	2.29e-29	116
MsG0180003421.01.T01	MTR_5g010330	42.169	166	70	2	23	188	122	261	5.75e-29	114
MsG0180003421.01.T01	MTR_1g076710	38.983	236	97	8	30	256	129	326	7.05e-29	114
MsG0180003421.01.T01	MTR_4g101990	47.753	178	66	4	23	198	132	284	2.10e-28	113
MsG0180003421.01.T01	MTR_6g061670	39.487	195	87	5	34	228	124	287	1.88e-26	107
MsG0180003421.01.T01	MTR_6g061670	39.487	195	87	5	34	228	129	292	1.99e-26	107
MsG0180003421.01.T01	MTR_7g077120	40.260	154	67	2	23	176	145	273	1.37e-25	105
MsG0180003421.01.T01	MTR_5g011610	36.207	174	79	4	32	203	53	196	1.10e-24	102
MsG0180003421.01.T01	MTR_5g011610	32.558	129	59	2	24	152	201	301	8.35e-12	65.9
MsG0180003421.01.T01	MTR_1g043440	71.233	73	20	1	284	355	83	155	1.82e-23	99.4
MsG0180003421.01.T01	MTR_4g120790	79.310	58	12	0	298	355	1	58	1.85e-23	97.4
MsG0180003421.01.T01	MTR_4g055813	39.326	178	73	7	12	188	1	144	2.81e-23	98.2
MsG0180003421.01.T01	MTR_4g035845	83.636	55	9	0	293	347	132	186	3.31e-23	96.3
MsG0180003421.01.T01	MTR_5g011620	34.320	169	81	2	35	203	115	253	1.15e-22	99.8
MsG0180003421.01.T01	MTR_4g055833	37.766	188	81	6	23	207	110	264	1.46e-22	97.4
MsG0180003421.01.T01	MTR_4g055803	38.674	181	76	7	12	189	107	255	1.58e-22	98.6
MsG0180003421.01.T01	MTR_4g100470	77.586	58	13	0	298	355	1	58	2.24e-22	93.6
MsG0180003421.01.T01	MTR_1g079780	38.028	142	59	3	35	175	109	222	3.80e-20	90.1
MsG0180003421.01.T01	MTR_7g116320	42.759	145	55	2	31	175	139	255	9.40e-20	89.7
MsG0180003421.01.T01	MTR_7g116320	42.958	142	53	3	31	172	139	252	2.18e-18	84.3
MsG0180003421.01.T01	MTR_3g034840	70.000	60	14	1	298	353	1	60	2.69e-18	82.8
MsG0180003421.01.T01	MTR_0599s0020	70.000	60	14	1	298	353	1	60	2.69e-18	82.8
MsG0180003421.01.T01	MTR_5g068980	58.571	70	22	1	278	340	250	319	3.43e-18	84.7
MsG0180003421.01.T01	MTR_1g038960	39.189	148	61	3	35	181	150	269	1.09e-17	83.6
MsG0180003421.01.T01	MTR_3g023560	32.500	160	77	2	34	190	61	192	9.54e-17	79.3
MsG0180003421.01.T01	MTR_2g027000	67.742	62	14	2	298	353	1	62	9.98e-17	77.8
MsG0180003421.01.T01	MTR_5g014360	35.000	160	75	3	18	176	173	304	7.30e-16	78.6
MsG0180003421.01.T01	MTR_1g038990	34.194	155	72	4	28	181	124	249	3.99e-14	72.8
MsG0180003421.01.T01	MTR_3g100470	28.758	153	85	2	35	187	101	229	5.80e-13	68.9
MsG0180003421.01.T01	MTR_3g068035	33.557	149	71	3	38	186	109	229	2.68e-12	67.4
MsG0180003421.01.T01	MTR_5g041430	34.247	146	69	4	30	174	106	225	4.45e-12	66.6
MsG0180003421.01.T01	MTR_5g011520	35.570	149	68	3	38	186	130	250	2.74e-11	64.3
MsG0180003421.01.T01	MTR_1g044155	33.784	148	70	2	38	185	156	275	9.28e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003421.01.T01	AT4G12080	45.408	196	74	3	23	218	158	320	1.31e-44	157
MsG0180003421.01.T01	AT2G33620	49.333	150	51	1	30	179	158	282	7.67e-37	136
MsG0180003421.01.T01	AT2G33620	49.333	150	51	1	30	179	158	282	7.67e-37	136
MsG0180003421.01.T01	AT2G33620	49.333	150	51	1	30	179	158	282	7.67e-37	136
MsG0180003421.01.T01	AT2G33620	49.333	150	51	1	30	179	158	282	7.67e-37	136
MsG0180003421.01.T01	AT2G45850	42.775	173	74	2	23	195	150	297	1.33e-36	135
MsG0180003421.01.T01	AT2G45850	42.775	173	74	2	23	195	150	297	1.33e-36	135
MsG0180003421.01.T01	AT4G25320	44.643	168	68	2	33	200	164	306	2.20e-36	136
MsG0180003421.01.T01	AT5G51590	50.000	144	47	2	34	177	177	295	1.78e-34	131
MsG0180003421.01.T01	AT4G22770	47.727	176	66	3	23	198	138	287	9.15e-34	127
MsG0180003421.01.T01	AT4G22770	47.727	176	66	3	23	198	138	287	9.15e-34	127
MsG0180003421.01.T01	AT5G62260	46.207	145	53	2	32	176	157	276	1.71e-33	128
MsG0180003421.01.T01	AT5G62260	46.207	145	53	2	32	176	157	276	1.71e-33	128
MsG0180003421.01.T01	AT2G45850	44.595	148	57	2	23	170	150	272	2.01e-32	122
MsG0180003421.01.T01	AT4G00200	50.610	164	56	2	34	197	122	260	4.69e-31	120
MsG0180003421.01.T01	AT4G00200	50.610	164	56	2	34	197	122	260	4.69e-31	120
MsG0180003421.01.T01	AT4G17950	41.520	171	74	3	30	200	216	360	9.81e-31	121
MsG0180003421.01.T01	AT1G63470	44.805	154	59	3	23	176	165	292	1.07e-30	120
MsG0180003421.01.T01	AT5G62260	45.000	140	52	2	32	171	157	271	1.42e-30	118
MsG0180003421.01.T01	AT1G63480	39.000	200	87	6	23	215	148	319	2.95e-30	119
MsG0180003421.01.T01	AT1G63480	39.000	200	87	6	23	215	148	319	2.95e-30	119
MsG0180003421.01.T01	AT1G63480	39.000	200	87	6	23	215	142	313	3.17e-30	118
MsG0180003421.01.T01	AT1G63480	39.000	200	87	6	23	215	142	313	3.17e-30	118
MsG0180003421.01.T01	AT1G63480	39.000	200	87	6	23	215	142	313	3.17e-30	118
MsG0180003421.01.T01	AT1G63480	39.000	200	87	6	23	215	142	313	3.17e-30	118
MsG0180003421.01.T01	AT1G63480	39.000	200	87	6	23	215	142	313	3.17e-30	118
MsG0180003421.01.T01	AT3G61310	43.506	154	62	2	23	176	152	280	1.76e-27	111
MsG0180003421.01.T01	AT3G04590	40.426	141	56	3	35	175	171	283	6.02e-24	100
MsG0180003421.01.T01	AT3G04590	40.426	141	56	3	35	175	171	283	3.85e-23	100
MsG0180003421.01.T01	AT5G46640	43.919	148	58	2	30	177	175	297	1.26e-22	98.2
MsG0180003421.01.T01	AT2G36560	35.263	190	91	7	34	219	104	265	4.50e-21	94.7
MsG0180003421.01.T01	AT2G45430	35.583	163	75	3	38	197	119	254	8.63e-13	68.9
MsG0180003421.01.T01	AT2G42940	36.170	141	60	4	38	177	83	194	2.29e-11	63.9
MsG0180003421.01.T01	AT1G14490	28.931	159	88	3	35	191	49	184	2.38e-11	63.2
MsG0180003421.01.T01	AT1G14490	29.114	158	87	3	36	191	31	165	2.62e-11	62.8
MsG0180003421.01.T01	AT5G49700	29.268	164	80	5	35	193	83	215	4.89e-11	63.2

Find 77 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATTGCAGGACTAATATTT+TGG	0.155587	1:+62109394	None:intergenic
TTCGAGTTTGAATTGGAATT+TGG	0.170542	1:+62105221	None:intergenic
CGTGCTGCTGTGACTATTTC+TGG	0.182840	1:+62107685	None:intergenic
TGCAATTTCAAGGAACAATT+TGG	0.185332	1:-62109379	MsG0180003421.01.T01:CDS
TTTAAATGGTTTCAAATTAA+AGG	0.185624	1:+62105246	None:intergenic
ATTGGAATTTGGACTTTAAA+TGG	0.193959	1:+62105232	None:intergenic
GGTCCTGACGGTCGAGTAAT+TGG	0.293984	1:-62108779	MsG0180003421.01.T01:CDS
ACAACAACAAGCCTCTTAAA+AGG	0.320963	1:-62107753	MsG0180003421.01.T01:CDS
CAACCATTAGGTACCGGTTT+AGG	0.323738	1:+62105181	None:intergenic
TGAATATTTGCTTGTGAGAT+AGG	0.357972	1:+62107661	None:intergenic
AAGAAAATATCATACTTGTA+TGG	0.364052	1:+62108721	None:intergenic
GCAATTTCAAGGAACAATTT+GGG	0.370310	1:-62109378	MsG0180003421.01.T01:CDS
TTTGAGATTCTATCTTTGTC+TGG	0.383251	1:-62108869	MsG0180003421.01.T01:CDS
AAATTGTTCCTTGAAATTGC+AGG	0.384855	1:+62109381	None:intergenic
TTACCGATTCGAGTTTGAAT+TGG	0.385164	1:+62105214	None:intergenic
GAAGGTTCCGGCGAAGGTTC+CGG	0.388864	1:-62105283	MsG0180003421.01.T01:CDS
GGAAGCTGATGAGACATAAT+AGG	0.397317	1:+62107619	None:intergenic
ATCTCACAAGCAAATATTCA+TGG	0.403263	1:-62107658	MsG0180003421.01.T01:CDS
AAACATTGATAGATTCTCTC+TGG	0.408364	1:+62107587	None:intergenic
AAGTATTATTCTCAACCATT+AGG	0.414096	1:+62105169	None:intergenic
CTAGGTCAACCTGGTTCTAC+TGG	0.416830	1:-62109889	MsG0180003421.01.T01:CDS
GCTGGTGTTCTTATAGCTGC+TGG	0.429689	1:-62108746	MsG0180003421.01.T01:CDS
GTAATTGGAGGTGCTGTTGC+TGG	0.430460	1:-62108764	MsG0180003421.01.T01:CDS
TGATGACGTTGAACCGAAAC+CGG	0.437410	1:-62105314	MsG0180003421.01.T01:CDS
TAAAATTGAAGTACCTAAAC+CGG	0.437812	1:-62105194	MsG0180003421.01.T01:CDS
CTTGTACTCAAAATGTTTGA+TGG	0.440843	1:-62110568	MsG0180003421.01.T01:CDS
CCACTCCTGATGATGATACT+TGG	0.440882	1:-62107540	MsG0180003421.01.T01:CDS
AGAAAATATCATACTTGTAT+GGG	0.443003	1:+62108722	None:intergenic
GATTCTCTCTGGATTTGATC+AGG	0.443447	1:+62107598	None:intergenic
AATGGTTTCAAATTAAAGGT+TGG	0.453619	1:+62105250	None:intergenic
AACTTTAGAGATTGCTCCAT+TGG	0.453949	1:+62109915	None:intergenic
GTGGCTTCTCCAACTTCAAC+TGG	0.454329	1:-62107709	MsG0180003421.01.T01:CDS
ATATTAGTCCTGCAATTTCA+AGG	0.455061	1:-62109389	MsG0180003421.01.T01:CDS
GAAAGAATGCATATTCCTCT+TGG	0.455886	1:+62109940	None:intergenic
GTACCTAAACCGGTACCTAA+TGG	0.462432	1:-62105184	MsG0180003421.01.T01:CDS
GGATTGAGTGTCTCACTAGC+TGG	0.467914	1:-62108800	MsG0180003421.01.T01:CDS
AAATCCACAGCAGCTGTGCT+TGG	0.476159	1:+62110173	None:intergenic
CTGTTCCAAGTATCATCATC+AGG	0.478067	1:+62107535	None:intergenic
TCTTGGTTTCAGATTGTAGT+GGG	0.483076	1:-62107796	MsG0180003421.01.T01:intron
TTTGTCACTTTGTAGGATGT+TGG	0.483338	1:-62109994	MsG0180003421.01.T01:intron
GTAAGGTGCGCAAGTTAACT+TGG	0.487657	1:-62105529	MsG0180003421.01.T01:CDS
ATTTCTGGACCAGTTGAAGT+TGG	0.494397	1:+62107700	None:intergenic
ATTCCAATTCAAACTCGAAT+CGG	0.498951	1:-62105217	MsG0180003421.01.T01:CDS
ATATGCATTCTTTCTGCCAA+TGG	0.504376	1:-62109931	MsG0180003421.01.T01:CDS
GTGGGGAGCTTCGTGTCAAA+TGG	0.505548	1:-62107778	MsG0180003421.01.T01:CDS
GTTTCCAAGCACAGCTGCTG+TGG	0.518458	1:-62110177	MsG0180003421.01.T01:CDS
TTGTACTCAAAATGTTTGAT+GGG	0.520041	1:-62110567	MsG0180003421.01.T01:intron
ATCTTTGTCTGGATCTTACA+CGG	0.521033	1:-62108858	MsG0180003421.01.T01:CDS
TATTCTCAACCATTAGGTAC+CGG	0.521101	1:+62105175	None:intergenic
GATATCGCCGGAACCTTCGC+CGG	0.522629	1:+62105276	None:intergenic
CCTCCAATTACTCGACCGTC+AGG	0.528246	1:+62108776	None:intergenic
AAAGGTTGGTTTGATATCGC+CGG	0.534184	1:+62105264	None:intergenic
TCAATAGATATATAGGGAGA+TGG	0.535996	1:-62105353	MsG0180003421.01.T01:intron
TACACGGCTTCTGACAATAG+TGG	0.542066	1:-62108842	MsG0180003421.01.T01:CDS
GTCACTTTGTAGGATGTTGG+TGG	0.552302	1:-62109991	MsG0180003421.01.T01:intron
CATGTAATCACAGTTTATGC+AGG	0.557312	1:-62110143	MsG0180003421.01.T01:CDS
GTCTCACTAGCTGGTCCTGA+CGG	0.568347	1:-62108791	MsG0180003421.01.T01:CDS
CCTGACGGTCGAGTAATTGG+AGG	0.569335	1:-62108776	MsG0180003421.01.T01:CDS
GGCATAAGAACTCGAGAGGG+TGG	0.588092	1:-62108821	MsG0180003421.01.T01:CDS
TTCTTGGTTTCAGATTGTAG+TGG	0.588884	1:-62107797	MsG0180003421.01.T01:intron
GAAAATATCATACTTGTATG+GGG	0.602829	1:+62108723	None:intergenic
AGGTAATGGAGAGGCTGACA+TGG	0.609701	1:-62106973	MsG0180003421.01.T01:intron
CTTGGTTTCAGATTGTAGTG+GGG	0.614189	1:-62107795	MsG0180003421.01.T01:intron
AAAGTTGCACTAGGTCAACC+TGG	0.616623	1:-62109898	MsG0180003421.01.T01:CDS
AATCACAGTTTATGCAGGAG+AGG	0.637801	1:-62110138	MsG0180003421.01.T01:intron
CCAAGTATCATCATCAGGAG+TGG	0.638537	1:+62107540	None:intergenic
GCAATCTCTAAAGTTGCACT+AGG	0.638595	1:-62109907	MsG0180003421.01.T01:CDS
TAGTGGCATAAGAACTCGAG+AGG	0.642518	1:-62108825	MsG0180003421.01.T01:CDS
TCTGATTTCAGGTAATGGAG+AGG	0.652237	1:-62106982	MsG0180003421.01.T01:intron
AAGCCACTGTTTGTTCACGT+TGG	0.653220	1:+62107725	None:intergenic
ATGCTACCACCAGTAGAACC+AGG	0.659895	1:+62109880	None:intergenic
TTTGCACAGAAGAGTCCAAG+AGG	0.677413	1:-62109955	MsG0180003421.01.T01:CDS
GGTCAACCTGGTTCTACTGG+TGG	0.677585	1:-62109886	MsG0180003421.01.T01:intron
GGAGATGGTTGACAAAGTCG+CGG	0.681690	1:-62105338	MsG0180003421.01.T01:CDS
GCATAAACTGTGATTACATG+TGG	0.695853	1:+62110146	None:intergenic
AGTGGCATAAGAACTCGAGA+GGG	0.696985	1:-62108824	MsG0180003421.01.T01:CDS
GTACCAACGTGAACAAACAG+TGG	0.714692	1:-62107728	MsG0180003421.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATAATTATTCATAACAA+TGG	-	Chr1:62107108-62107127	MsG0180003421.01.T01:intron	10.0%
!!	AAATAATTATTCATAACAAT+GGG	-	Chr1:62107109-62107128	MsG0180003421.01.T01:intron	10.0%
!!	ATTGAATAAAAAAAATACAA+AGG	+	Chr1:62110427-62110446	None:intergenic	10.0%
!!!	AATATTATATATGCTTTATT+TGG	+	Chr1:62107909-62107928	None:intergenic	10.0%
!!!	CAAATCTTTTTTTTTTTTTT+GGG	+	Chr1:62107210-62107229	None:intergenic	10.0%
!!!	GTTTCTTTTTTTATTTTAAA+GGG	+	Chr1:62109711-62109730	None:intergenic	10.0%
!!!	TCAAATCTTTTTTTTTTTTT+TGG	+	Chr1:62107211-62107230	None:intergenic	10.0%
!!!	TGTTTCTTTTTTTATTTTAA+AGG	+	Chr1:62109712-62109731	None:intergenic	10.0%
!!!	TTCATTATTTTTGAATATTT+TGG	-	Chr1:62109099-62109118	MsG0180003421.01.T01:intron	10.0%
!!!	TTTTAATTTAATCAAATAGT+TGG	-	Chr1:62109324-62109343	MsG0180003421.01.T01:intron	10.0%
!!!	TTTTATTCAATAGATATATA+GGG	-	Chr1:62110436-62110455	MsG0180003421.01.T01:intron	10.0%
!!!	TTTTTATTCAATAGATATAT+AGG	-	Chr1:62110435-62110454	MsG0180003421.01.T01:intron	10.0%
!!	AAGAATAAATAAATTACTTG+CGG	+	Chr1:62110404-62110423	None:intergenic	15.0%
!!	CAGAAATTAGAATATTATTA+TGG	-	Chr1:62108912-62108931	MsG0180003421.01.T01:intron	15.0%
!!	GTTTGTGAAATAATTAATTT+GGG	-	Chr1:62105523-62105542	MsG0180003421.01.T01:CDS	15.0%
!!	TTATATATTTATTTCAGCTT+TGG	+	Chr1:62107956-62107975	None:intergenic	15.0%
!!	TTTAAATGGTTTCAAATTAA+AGG	+	Chr1:62110552-62110571	None:intergenic	15.0%
!!!	ATAACTAGTTTACATTATTA+GGG	+	Chr1:62105365-62105384	None:intergenic	15.0%
!!!	GATTTATTTTTTACTTGTAA+TGG	-	Chr1:62105404-62105423	MsG0180003421.01.T01:intron	15.0%
!!!	GTTCTATTTAATTTAGTTTA+TGG	-	Chr1:62109403-62109422	MsG0180003421.01.T01:CDS	15.0%
!!!	TTTTTTCTTTTTCATCTTTT+TGG	-	Chr1:62105272-62105291	MsG0180003421.01.T01:CDS	15.0%
!!	AAAATTGAACCAACAATTAA+AGG	+	Chr1:62105997-62106016	None:intergenic	20.0%
!!	AAAATTGGATATAAAGTGAT+TGG	+	Chr1:62107632-62107651	None:intergenic	20.0%
!!	AAATATTTAATCTTCCAAGA+AGG	-	Chr1:62109527-62109546	MsG0180003421.01.T01:intron	20.0%
!!	AAATTGAACCAACAATTAAA+GGG	+	Chr1:62105996-62106015	None:intergenic	20.0%
!!	AAGAAAATATCATACTTGTA+TGG	+	Chr1:62107077-62107096	None:intergenic	20.0%
!!	ACCAACTGATAAATATAAAA+TGG	+	Chr1:62107593-62107612	None:intergenic	20.0%
!!	AGAAAATATCATACTTGTAT+GGG	+	Chr1:62107076-62107095	None:intergenic	20.0%
!!	AGTGTGAATCAATTATTATA+AGG	-	Chr1:62109618-62109637	MsG0180003421.01.T01:intron	20.0%
!!	CGTTTGTGAAATAATTAATT+TGG	-	Chr1:62105522-62105541	MsG0180003421.01.T01:CDS	20.0%
!!	GCATATATAATATTTGATTG+AGG	-	Chr1:62107915-62107934	MsG0180003421.01.T01:intron	20.0%
!!	TAATAACAAATTCTGACAAA+GGG	+	Chr1:62106351-62106370	None:intergenic	20.0%
!!!	AAAATTCAAAGCTTTTTAAG+TGG	+	Chr1:62109881-62109900	None:intergenic	20.0%
!!!	AACATTTTTAGCTAACAAAT+AGG	+	Chr1:62106176-62106195	None:intergenic	20.0%
!!!	ACATTTTGCAATTTTATACT+AGG	+	Chr1:62106315-62106334	None:intergenic	20.0%
!!!	ATATTATTTTGTCACTTTGT+AGG	-	Chr1:62105794-62105813	MsG0180003421.01.T01:intron	20.0%
!!!	ATTAAACTATGACATTTTCT+TGG	-	Chr1:62109364-62109383	MsG0180003421.01.T01:intron	20.0%
!!!	CATAACTAGTTTACATTATT+AGG	+	Chr1:62105366-62105385	None:intergenic	20.0%
!!!	TATATTTTCCCTTTAATTGT+TGG	-	Chr1:62105985-62106004	MsG0180003421.01.T01:intron	20.0%
!!!	TGTTTTTTAATTCTGATTTC+AGG	-	Chr1:62108802-62108821	MsG0180003421.01.T01:CDS	20.0%
!!!	TTTCATCTTTTTGGTTTATA+GGG	-	Chr1:62105281-62105300	MsG0180003421.01.T01:CDS	20.0%
!!!	TTTTCATCTTTTTGGTTTAT+AGG	-	Chr1:62105280-62105299	MsG0180003421.01.T01:CDS	20.0%
!	AATGAATCAAGCAATAAAAC+AGG	+	Chr1:62109459-62109478	None:intergenic	25.0%
!	AATGGTTTCAAATTAAAGGT+TGG	+	Chr1:62110548-62110567	None:intergenic	25.0%
!	ATGATACAATACCTGATATT+TGG	+	Chr1:62110184-62110203	None:intergenic	25.0%
!	ATTGGAATTTGGACTTTAAA+TGG	+	Chr1:62110566-62110585	None:intergenic	25.0%
!	CTAATAACAAATTCTGACAA+AGG	+	Chr1:62106352-62106371	None:intergenic	25.0%
!	CTAGAAAATAATAGTGTTCA+AGG	+	Chr1:62106032-62106051	None:intergenic	25.0%
!	GAAAATATCATACTTGTATG+GGG	+	Chr1:62107075-62107094	None:intergenic	25.0%
!	GAGAACTAATTCTACTAAAT+GGG	-	Chr1:62106226-62106245	MsG0180003421.01.T01:intron	25.0%
!	GCTTGATTCATTTATTTGAT+TGG	-	Chr1:62109467-62109486	MsG0180003421.01.T01:intron	25.0%
!	TAACATCACAAGTGATAAAA+TGG	-	Chr1:62109242-62109261	MsG0180003421.01.T01:intron	25.0%
!	TAATCTTCTTAACACATTCT+TGG	-	Chr1:62107982-62108001	MsG0180003421.01.T01:intron	25.0%
!	TACTGAATAAGCTAGAAAAT+TGG	+	Chr1:62107647-62107666	None:intergenic	25.0%
!	TATGTTTGTCTCTATTTGAA+GGG	-	Chr1:62106133-62106152	MsG0180003421.01.T01:intron	25.0%
!	TCAAGTATTACAACACTAAA+AGG	-	Chr1:62106585-62106604	MsG0180003421.01.T01:intron	25.0%
!	TGAGAACTAATTCTACTAAA+TGG	-	Chr1:62106225-62106244	MsG0180003421.01.T01:intron	25.0%
!	TGATTTCATTCATAACACTA+TGG	-	Chr1:62107351-62107370	MsG0180003421.01.T01:intron	25.0%
!	TTGTACTCAAAATGTTTGAT+GGG	-	Chr1:62105228-62105247	MsG0180003421.01.T01:CDS	25.0%
!	TTTAACAGATCTATAGGATT+TGG	-	Chr1:62105756-62105775	MsG0180003421.01.T01:intron	25.0%
!!	AAATTGCAGGACTAATATTT+TGG	+	Chr1:62106404-62106423	None:intergenic	25.0%
!!	ATTATTCATAACAATGGGTT+TGG	-	Chr1:62107114-62107133	MsG0180003421.01.T01:intron	25.0%
!!	CTTCTTCTTTTTCTTTACAA+TGG	-	Chr1:62105187-62105206	MsG0180003421.01.T01:CDS	25.0%
!!	GCATAATATGTAGAGTATTT+GGG	-	Chr1:62107325-62107344	MsG0180003421.01.T01:intron	25.0%
!!	GGTATGAGATGAAAATTTTA+TGG	-	Chr1:62107135-62107154	MsG0180003421.01.T01:intron	25.0%
!!	TAAAATTGAAGTACCTAAAC+CGG	-	Chr1:62110601-62110620	MsG0180003421.01.T01:CDS	25.0%
!!	TGCATAATATGTAGAGTATT+TGG	-	Chr1:62107324-62107343	MsG0180003421.01.T01:intron	25.0%
!!	TTAATTCTGATTTCAGGTAA+TGG	-	Chr1:62108808-62108827	MsG0180003421.01.T01:CDS	25.0%
!!	TTTTGTGTCTGTAATTTTGA+AGG	-	Chr1:62105589-62105608	MsG0180003421.01.T01:intron	25.0%
!!!	AATGGCTAAATTTTTCAGTT+AGG	-	Chr1:62105422-62105441	MsG0180003421.01.T01:intron	25.0%
!!!	ATGGCTAAATTTTTCAGTTA+GGG	-	Chr1:62105423-62105442	MsG0180003421.01.T01:intron	25.0%
!!!	ATTTAGTGCATATTGATTTG+TGG	-	Chr1:62106676-62106695	MsG0180003421.01.T01:intron	25.0%
!!!	GACATTTTTAGTTATTCTGT+TGG	-	Chr1:62109045-62109064	MsG0180003421.01.T01:intron	25.0%
!!!	GCCATTTTATATTTATCAGT+TGG	-	Chr1:62107589-62107608	MsG0180003421.01.T01:CDS	25.0%
!!!	TGAAGTTTTAACAGATCTAT+AGG	-	Chr1:62105750-62105769	MsG0180003421.01.T01:intron	25.0%
!!!	TTGATTTGTGGATCATTTAT+TGG	-	Chr1:62106688-62106707	MsG0180003421.01.T01:intron	25.0%
!!!	TTTTTGGTTTATAGGGTTTT+GGG	-	Chr1:62105288-62105307	MsG0180003421.01.T01:CDS	25.0%
	AAACAGTTACAATAAGACGA+CGG	+	Chr1:62108787-62108806	None:intergenic	30.0%
	AAACATTGATAGATTCTCTC+TGG	+	Chr1:62108211-62108230	None:intergenic	30.0%
	AAATTGTTCCTTGAAATTGC+AGG	+	Chr1:62106417-62106436	None:intergenic	30.0%
	AATTCCAAAAAGCAATGCAA+TGG	-	Chr1:62106517-62106536	MsG0180003421.01.T01:intron	30.0%
	AATTGTTCCTTGAAATTGCA+GGG	+	Chr1:62106416-62106435	None:intergenic	30.0%
	ATATTAGTCCTGCAATTTCA+AGG	-	Chr1:62106406-62106425	MsG0180003421.01.T01:intron	30.0%
	ATCTCACAAGCAAATATTCA+TGG	-	Chr1:62108137-62108156	MsG0180003421.01.T01:intron	30.0%
	ATTCCAATTCAAACTCGAAT+CGG	-	Chr1:62110578-62110597	MsG0180003421.01.T01:CDS	30.0%
	CAAAGAAATATTGATGTCAG+GGG	+	Chr1:62108315-62108334	None:intergenic	30.0%
	CAATGTCTCATTTACTTTCA+GGG	-	Chr1:62106899-62106918	MsG0180003421.01.T01:intron	30.0%
	CTAAGAATAGAGTATGGATA+TGG	-	Chr1:62106069-62106088	MsG0180003421.01.T01:intron	30.0%
	CTATGTTTGTCTCTATTTGA+AGG	-	Chr1:62106132-62106151	MsG0180003421.01.T01:intron	30.0%
	CTGATGAATATTCAGATCAA+AGG	-	Chr1:62108285-62108304	MsG0180003421.01.T01:intron	30.0%
	CTTGTACTCAAAATGTTTGA+TGG	-	Chr1:62105227-62105246	MsG0180003421.01.T01:CDS	30.0%
	GAAATTATTCTATCTCGTCT+CGG	-	Chr1:62109854-62109873	MsG0180003421.01.T01:intron	30.0%
	GCAAAGAAATATTGATGTCA+GGG	+	Chr1:62108316-62108335	None:intergenic	30.0%
	GCAATTTCAAGGAACAATTT+GGG	-	Chr1:62106417-62106436	MsG0180003421.01.T01:intron	30.0%
	GTTTCATGTCACTAATATGA+CGG	-	Chr1:62108381-62108400	MsG0180003421.01.T01:intron	30.0%
	TACCTACTGTTGACATATAT+GGG	+	Chr1:62106095-62106114	None:intergenic	30.0%
	TACTATAAGCTTCTACCTAA+AGG	+	Chr1:62108466-62108485	None:intergenic	30.0%
	TATAGTATTACTCGTCTTCA+CGG	-	Chr1:62108479-62108498	MsG0180003421.01.T01:intron	30.0%
	TATTGGATGCACTATTTATC+TGG	-	Chr1:62106705-62106724	MsG0180003421.01.T01:intron	30.0%
	TCAATAGATATATAGGGAGA+TGG	-	Chr1:62110442-62110461	MsG0180003421.01.T01:intron	30.0%
	TCAATGTCTCATTTACTTTC+AGG	-	Chr1:62106898-62106917	MsG0180003421.01.T01:intron	30.0%
	TGAATATTTGCTTGTGAGAT+AGG	+	Chr1:62108137-62108156	None:intergenic	30.0%
	TGCAATTTCAAGGAACAATT+TGG	-	Chr1:62106416-62106435	MsG0180003421.01.T01:intron	30.0%
	TTAATCTTCCAAGAAGGTAA+CGG	-	Chr1:62109533-62109552	MsG0180003421.01.T01:intron	30.0%
!	TCAATGTCATGCATCATTTT+CGG	-	Chr1:62106786-62106805	MsG0180003421.01.T01:intron	30.0%
!	TTCGAGTTTGAATTGGAATT+TGG	+	Chr1:62110577-62110596	None:intergenic	30.0%
!	TTTGAGATTCTATCTTTGTC+TGG	-	Chr1:62106926-62106945	MsG0180003421.01.T01:intron	30.0%
!!	AATGTCTTTTGATAACTCCA+TGG	+	Chr1:62109031-62109050	None:intergenic	30.0%
!!	AATTTTTCAGTTAGGGTTCA+AGG	-	Chr1:62105430-62105449	MsG0180003421.01.T01:intron	30.0%
!!	GACATTTTCTTGGTTGATTT+TGG	-	Chr1:62109374-62109393	MsG0180003421.01.T01:CDS	30.0%
!!	TGATAGATTTTGATCCTCTA+CGG	+	Chr1:62109213-62109232	None:intergenic	30.0%
!!!	AGTCCAACTTAACTAGTTTT+TGG	-	Chr1:62109815-62109834	MsG0180003421.01.T01:intron	30.0%
!!!	CTTTGTTTTCTTCTTGAGTT+GGG	-	Chr1:62108993-62109012	MsG0180003421.01.T01:intron	30.0%
!!!	CTTTTTGGTTTATAGGGTTT+TGG	-	Chr1:62105287-62105306	MsG0180003421.01.T01:CDS	30.0%
!!!	GTCCAACTTAACTAGTTTTT+GGG	-	Chr1:62109816-62109835	MsG0180003421.01.T01:intron	30.0%
!!!	TCCAACTTAACTAGTTTTTG+GGG	-	Chr1:62109817-62109836	MsG0180003421.01.T01:intron	30.0%
!!!	TCTTTGTTTTCTTCTTGAGT+TGG	-	Chr1:62108992-62109011	MsG0180003421.01.T01:intron	30.0%
	AACAGTTACAATAAGACGAC+GGG	+	Chr1:62108786-62108805	None:intergenic	35.0%
	AAGCTAACCAAGAACAAAAG+TGG	+	Chr1:62110378-62110397	None:intergenic	35.0%
	AATGTAAGCAATTGCTTGGA+TGG	+	Chr1:62108752-62108771	None:intergenic	35.0%
	ACAACAACAAGCCTCTTAAA+AGG	-	Chr1:62108042-62108061	MsG0180003421.01.T01:intron	35.0%
	ACCAAAACCATCTATTCATC+AGG	+	Chr1:62108338-62108357	None:intergenic	35.0%
	ACCCCAAAAACTAGTTAAGT+TGG	+	Chr1:62109821-62109840	None:intergenic	35.0%
	AGATCCAAAGAAATCTCACA+AGG	-	Chr1:62109569-62109588	MsG0180003421.01.T01:intron	35.0%
	ATAATAGCCCTGCAATTTCA+AGG	-	Chr1:62106466-62106485	MsG0180003421.01.T01:intron	35.0%
	ATAGTTATCCGTTACCTTCT+TGG	+	Chr1:62109544-62109563	None:intergenic	35.0%
	ATATGCATTCTTTCTGCCAA+TGG	-	Chr1:62105864-62105883	MsG0180003421.01.T01:intron	35.0%
	ATCTTTGTCTGGATCTTACA+CGG	-	Chr1:62106937-62106956	MsG0180003421.01.T01:intron	35.0%
	ATGATCGAAGTACAACTGTT+TGG	-	Chr1:62107419-62107438	MsG0180003421.01.T01:intron	35.0%
	CAAAAAGCAATGCAATGGTA+AGG	-	Chr1:62106522-62106541	MsG0180003421.01.T01:intron	35.0%
	CATGTAATCACAGTTTATGC+AGG	-	Chr1:62105652-62105671	MsG0180003421.01.T01:intron	35.0%
	CTGACGATTTGCAATGATTT+GGG	+	Chr1:62110134-62110153	None:intergenic	35.0%
	CTTCTGCTAAGAATAGAGTA+TGG	-	Chr1:62106063-62106082	MsG0180003421.01.T01:intron	35.0%
	GAAAGAATGCATATTCCTCT+TGG	+	Chr1:62105858-62105877	None:intergenic	35.0%
	GAAGTACAACTGTTTGGTAA+TGG	-	Chr1:62107425-62107444	MsG0180003421.01.T01:intron	35.0%
	GAATGAGATGATGATCTAGT+TGG	-	Chr1:62108506-62108525	MsG0180003421.01.T01:intron	35.0%
	GATAGAATAATTTCCCAACG+TGG	+	Chr1:62109848-62109867	None:intergenic	35.0%
	GCATAAACTGTGATTACATG+TGG	+	Chr1:62105652-62105671	None:intergenic	35.0%
	GGCAAAGAAATATTGATGTC+AGG	+	Chr1:62108317-62108336	None:intergenic	35.0%
	GTACCTACTGTTGACATATA+TGG	+	Chr1:62106096-62106115	None:intergenic	35.0%
	TAACGGAATGAAACTAACAG+CGG	-	Chr1:62108845-62108864	MsG0180003421.01.T01:CDS	35.0%
	TACTTATCCATCATCCTCAT+GGG	-	Chr1:62107713-62107732	MsG0180003421.01.T01:CDS	35.0%
	TAGGAATGTAAGCAATTGCT+TGG	+	Chr1:62108756-62108775	None:intergenic	35.0%
	TCACTAATATGACGGCTTTA+AGG	-	Chr1:62108389-62108408	MsG0180003421.01.T01:intron	35.0%
	TCTTGGTTTCAGATTGTAGT+GGG	-	Chr1:62107999-62108018	MsG0180003421.01.T01:intron	35.0%
	TGAACCTTGTGAGATTTCTT+TGG	+	Chr1:62109576-62109595	None:intergenic	35.0%
	TTACTTATCCATCATCCTCA+TGG	-	Chr1:62107712-62107731	MsG0180003421.01.T01:CDS	35.0%
	TTCTTGGTTTCAGATTGTAG+TGG	-	Chr1:62107998-62108017	MsG0180003421.01.T01:intron	35.0%
	TTCTTTGCCTGATGAATAGA+TGG	-	Chr1:62108328-62108347	MsG0180003421.01.T01:intron	35.0%
	TTTGTCTCTATTTGAAGGGT+TGG	-	Chr1:62106137-62106156	MsG0180003421.01.T01:intron	35.0%
!	AAAATGGTTGATGCGAAGAA+GGG	-	Chr1:62109258-62109277	MsG0180003421.01.T01:intron	35.0%
!	AACTTTAGAGATTGCTCCAT+TGG	+	Chr1:62105883-62105902	None:intergenic	35.0%
!	AAGTAAAGCTTTTCGTCTCT+TGG	-	Chr1:62106622-62106641	MsG0180003421.01.T01:intron	35.0%
!	ACCCAAAAAATCGCACTTTT+TGG	+	Chr1:62110099-62110118	None:intergenic	35.0%
!	CAAAACTCATCTCATTTTGC+TGG	-	Chr1:62110204-62110223	MsG0180003421.01.T01:intron	35.0%
!	CACTAATATGACGGCTTTAA+GGG	-	Chr1:62108390-62108409	MsG0180003421.01.T01:intron	35.0%
!	TAAAATGGTTGATGCGAAGA+AGG	-	Chr1:62109257-62109276	MsG0180003421.01.T01:intron	35.0%
!	TATGGTTTTCGTAGGCTATA+GGG	-	Chr1:62110244-62110263	MsG0180003421.01.T01:intron	35.0%
!	TGCTTGATGTCATTTCCTTT+AGG	-	Chr1:62108448-62108467	MsG0180003421.01.T01:intron	35.0%
!!	CCCAAAAAATCGCACTTTTT+GGG	+	Chr1:62110098-62110117	None:intergenic	35.0%
!!	CTTACCATTGCATTGCTTTT+TGG	+	Chr1:62106524-62106543	None:intergenic	35.0%
!!	TGTCTGTAATTTTGAAGGTG+AGG	-	Chr1:62105594-62105613	MsG0180003421.01.T01:intron	35.0%
!!	TTACCGATTCGAGTTTGAAT+TGG	+	Chr1:62110584-62110603	None:intergenic	35.0%
!!	TTTGTCACTTTGTAGGATGT+TGG	-	Chr1:62105801-62105820	MsG0180003421.01.T01:intron	35.0%
!!!	AATCGCAAGTTTTGATTCAC+AGG	+	Chr1:62107815-62107834	None:intergenic	35.0%
!!!	ACCCAAAAAGTGCGATTTTT+TGG	-	Chr1:62110094-62110113	MsG0180003421.01.T01:intron	35.0%
!!!	AGGGATATTTTTTGACTCGT+GGG	+	Chr1:62107766-62107785	None:intergenic	35.0%
!!!	ATTTTGCTGGTTTTTGTGCT+TGG	-	Chr1:62110217-62110236	MsG0180003421.01.T01:intron	35.0%
!!!	CCCAAAAAGTGCGATTTTTT+GGG	-	Chr1:62110095-62110114	MsG0180003421.01.T01:intron	35.0%
!!!	CTTTTTGGGTTTTTTGAAGG+TGG	+	Chr1:62110084-62110103	None:intergenic	35.0%
!!!	GCACTTTTTGGGTTTTTTGA+AGG	+	Chr1:62110087-62110106	None:intergenic	35.0%
!!!	TAGGGATATTTTTTGACTCG+TGG	+	Chr1:62107767-62107786	None:intergenic	35.0%
!!!	TGGTAGCATTTTGACTTATG+AGG	-	Chr1:62105929-62105948	MsG0180003421.01.T01:intron	35.0%
!!!	TTTTTGTTTCTGTCGCTCTT+GGG	-	Chr1:62109787-62109806	MsG0180003421.01.T01:intron	35.0%
	AATAATTCGCGTGGCATTTG+TGG	+	Chr1:62107851-62107870	None:intergenic	40.0%
	AATCACAGTTTATGCAGGAG+AGG	-	Chr1:62105657-62105676	MsG0180003421.01.T01:intron	40.0%
	AATTTGACCCATGAGGATGA+TGG	+	Chr1:62107723-62107742	None:intergenic	40.0%
	ACAGTTACAATAAGACGACG+GGG	+	Chr1:62108785-62108804	None:intergenic	40.0%
	ACTAACAGCGGAATTTGTGA+TGG	-	Chr1:62108857-62108876	MsG0180003421.01.T01:CDS	40.0%
	AGAAAATGGTGGTTGGAGTT+CGG	+	Chr1:62110055-62110074	None:intergenic	40.0%
	AGAATAATTTCCCAACGTGG+TGG	+	Chr1:62109845-62109864	None:intergenic	40.0%
	ATAATTCGCGTGGCATTTGT+GGG	+	Chr1:62107850-62107869	None:intergenic	40.0%
	CAAAAAACATGACTGCACAG+TGG	+	Chr1:62110344-62110363	None:intergenic	40.0%
	CACTTGAGCTAATCTCATGA+TGG	+	Chr1:62106203-62106222	None:intergenic	40.0%
	CCAAATCATTGCAAATCGTC+AGG	-	Chr1:62110132-62110151	MsG0180003421.01.T01:intron	40.0%
	CCTGACGATTTGCAATGATT+TGG	+	Chr1:62110135-62110154	None:intergenic	40.0%
	CCTTTCTTTGACGAGTGTTA+CGG	-	Chr1:62109122-62109141	MsG0180003421.01.T01:intron	40.0%
	CTCATCAAGCACCAAATATC+AGG	-	Chr1:62110170-62110189	MsG0180003421.01.T01:CDS	40.0%
	CTGTTCCAAGTATCATCATC+AGG	+	Chr1:62108263-62108282	None:intergenic	40.0%
	CTTGGTTTCAGATTGTAGTG+GGG	-	Chr1:62108000-62108019	MsG0180003421.01.T01:intron	40.0%
	GAATAATTTCCCAACGTGGT+GGG	+	Chr1:62109844-62109863	None:intergenic	40.0%
	GACATGAAACGTCATGTCAT+AGG	+	Chr1:62108371-62108390	None:intergenic	40.0%
	GATTCTCTCTGGATTTGATC+AGG	+	Chr1:62108200-62108219	None:intergenic	40.0%
	GCGTTATTTAACATGCGCAA+TGG	+	Chr1:62109943-62109962	None:intergenic	40.0%
	GGAACAAAATTTGACCCATG+AGG	+	Chr1:62107730-62107749	None:intergenic	40.0%
	GGAAGCTGATGAGACATAAT+AGG	+	Chr1:62108179-62108198	None:intergenic	40.0%
	TACGCTATACGCTAGTTGTT+TGG	+	Chr1:62107392-62107411	None:intergenic	40.0%
	TTTCAGTTAGGGTTCAAGGT+CGG	-	Chr1:62105434-62105453	MsG0180003421.01.T01:intron	40.0%
!	ATTTCTGGACCAGTTGAAGT+TGG	+	Chr1:62108098-62108117	None:intergenic	40.0%
!	CGTTGGTACTTCCTTTTAAG+AGG	+	Chr1:62108056-62108075	None:intergenic	40.0%
!	GCCTGATGAATAGATGGTTT+TGG	-	Chr1:62108334-62108353	MsG0180003421.01.T01:intron	40.0%
!	GTATGGTTTTCGTAGGCTAT+AGG	-	Chr1:62110243-62110262	MsG0180003421.01.T01:intron	40.0%
!	TAGCTAGTGGACAATGTCTA+TGG	+	Chr1:62106552-62106571	None:intergenic	40.0%
!	TTTTCGTAGGCTATAGGGTA+AGG	-	Chr1:62110249-62110268	MsG0180003421.01.T01:intron	40.0%
!!	AAAGGTTGGTTTGATATCGC+CGG	+	Chr1:62110534-62110553	None:intergenic	40.0%
!!	GCAATCTCTAAAGTTGCACT+AGG	-	Chr1:62105888-62105907	MsG0180003421.01.T01:intron	40.0%
!!	GTTTTTGTGCTTGGTTCGTA+TGG	-	Chr1:62110226-62110245	MsG0180003421.01.T01:intron	40.0%
!!	TAATATGACGGCTTTAAGGG+TGG	-	Chr1:62108393-62108412	MsG0180003421.01.T01:intron	40.0%
!!	TCTGATTTCAGGTAATGGAG+AGG	-	Chr1:62108813-62108832	MsG0180003421.01.T01:CDS	40.0%
!!	TGATCTAGTTGGTGTCAGTT+CGG	-	Chr1:62108517-62108536	MsG0180003421.01.T01:intron	40.0%
!!	TTGGTTCGTATGGTTTTCGT+AGG	-	Chr1:62110236-62110255	MsG0180003421.01.T01:intron	40.0%
!!!	GCATTTTGACTTATGAGGCA+TGG	-	Chr1:62105934-62105953	MsG0180003421.01.T01:intron	40.0%
!!!	GTTTTTGTTTCTGTCGCTCT+TGG	-	Chr1:62109786-62109805	MsG0180003421.01.T01:intron	40.0%
!!!	TTGGGTTTTTTGAAGGTGGA+GGG	+	Chr1:62110080-62110099	None:intergenic	40.0%
!!!	TTTGGGTTTTTTGAAGGTGG+AGG	+	Chr1:62110081-62110100	None:intergenic	40.0%
!!!	TTTTGCGCCACTTTTGTTCT+TGG	-	Chr1:62110368-62110387	MsG0180003421.01.T01:intron	40.0%
	AAAAAAGAAGGTTCCGGCGA+AGG	-	Chr1:62110506-62110525	MsG0180003421.01.T01:intron	45.0%
	AAAGTTGCACTAGGTCAACC+TGG	-	Chr1:62105897-62105916	MsG0180003421.01.T01:intron	45.0%
	AACCGGTACCTAATGGTTGA+CGG	-	Chr1:62110618-62110637	MsG0180003421.01.T01:CDS	45.0%
	AAGCCACTGTTTGTTCACGT+TGG	+	Chr1:62108073-62108092	None:intergenic	45.0%
	AGCTTGAGCAATAATTCGCG+TGG	+	Chr1:62107860-62107879	None:intergenic	45.0%
	AGTGGCATAAGAACTCGAGA+GGG	-	Chr1:62106971-62106990	MsG0180003421.01.T01:intron	45.0%
	CATCAAGCATTAGTCCGACA+TGG	+	Chr1:62108437-62108456	None:intergenic	45.0%
	CCAAGTATCATCATCAGGAG+TGG	+	Chr1:62108258-62108277	None:intergenic	45.0%
	CCGTAACACTCGTCAAAGAA+AGG	+	Chr1:62109125-62109144	None:intergenic	45.0%
	CGGAATTTGTGATGGCAACT+AGG	-	Chr1:62108865-62108884	MsG0180003421.01.T01:CDS	45.0%
	GAAGGTGGAGGGAAAGAAAA+TGG	+	Chr1:62110069-62110088	None:intergenic	45.0%
	GAGGGAAAGAAAATGGTGGT+TGG	+	Chr1:62110062-62110081	None:intergenic	45.0%
	GCATTTGTGGGTGATTTGAG+TGG	+	Chr1:62107838-62107857	None:intergenic	45.0%
	GGCCCATATATGTCAACAGT+AGG	-	Chr1:62106090-62106109	MsG0180003421.01.T01:intron	45.0%
	GTAAGGTGCGCAAGTTAACT+TGG	-	Chr1:62110266-62110285	MsG0180003421.01.T01:intron	45.0%
	GTACCAACGTGAACAAACAG+TGG	-	Chr1:62108067-62108086	MsG0180003421.01.T01:intron	45.0%
	GTACCTAAACCGGTACCTAA+TGG	-	Chr1:62110611-62110630	MsG0180003421.01.T01:CDS	45.0%
	GTGACAACTTCTCTAGCTAG+TGG	+	Chr1:62106565-62106584	None:intergenic	45.0%
	TAAGACGACGGGGAAAATGT+AGG	+	Chr1:62108775-62108794	None:intergenic	45.0%
	TACACGGCTTCTGACAATAG+TGG	-	Chr1:62106953-62106972	MsG0180003421.01.T01:intron	45.0%
	TAGTGGCATAAGAACTCGAG+AGG	-	Chr1:62106970-62106989	MsG0180003421.01.T01:intron	45.0%
	TTGATGCGAAGAAGGGCTAA+AGG	-	Chr1:62109265-62109284	MsG0180003421.01.T01:intron	45.0%
	TTTGCACAGAAGAGTCCAAG+AGG	-	Chr1:62105840-62105859	MsG0180003421.01.T01:intron	45.0%
!	CACTATGGCTCTGTTTGTCA+AGG	-	Chr1:62107366-62107385	MsG0180003421.01.T01:intron	45.0%
!	CCACTCCTGATGATGATACT+TGG	-	Chr1:62108255-62108274	MsG0180003421.01.T01:intron	45.0%
!	GTCACTTTGTAGGATGTTGG+TGG	-	Chr1:62105804-62105823	MsG0180003421.01.T01:intron	45.0%
!	TGATGACGTTGAACCGAAAC+CGG	-	Chr1:62110481-62110500	MsG0180003421.01.T01:intron	45.0%
!!	CAACCATTAGGTACCGGTTT+AGG	+	Chr1:62110617-62110636	None:intergenic	45.0%
!!	TCTTGAGTTGGGAGTTAGCT+AGG	-	Chr1:62109004-62109023	MsG0180003421.01.T01:intron	45.0%
!!!	CCTTCTTTTTTGGCCGGTTT+CGG	+	Chr1:62110497-62110516	None:intergenic	45.0%
!!!	TTCGCCGGAACCTTCTTTTT+TGG	+	Chr1:62110507-62110526	None:intergenic	45.0%
!!!	AAGATTAAATATTTTTAATT+CGG	+	Chr1:62109521-62109540	None:intergenic	5.0%
	AAATCCACAGCAGCTGTGCT+TGG	+	Chr1:62105625-62105644	None:intergenic	50.0%
	ATGCTACCACCAGTAGAACC+AGG	+	Chr1:62105918-62105937	None:intergenic	50.0%
	CCGAAACCGGCCAAAAAAGA+AGG	-	Chr1:62110494-62110513	MsG0180003421.01.T01:intron	50.0%
	CCGGCCAAAAAAGAAGGTTC+CGG	-	Chr1:62110500-62110519	MsG0180003421.01.T01:intron	50.0%
	CTTTATGGTGCAGCAGCGAT+AGG	+	Chr1:62109187-62109206	None:intergenic	50.0%
	GATCCTCTACGGCAGCTTTA+TGG	+	Chr1:62109202-62109221	None:intergenic	50.0%
	GCTGGTGTTCTTATAGCTGC+TGG	-	Chr1:62107049-62107068	MsG0180003421.01.T01:intron	50.0%
	GGAGATGGTTGACAAAGTCG+CGG	-	Chr1:62110457-62110476	MsG0180003421.01.T01:intron	50.0%
	GGATTGAGTGTCTCACTAGC+TGG	-	Chr1:62106995-62107014	MsG0180003421.01.T01:intron	50.0%
	GGTGGAGGGAAAGAAAATGG+TGG	+	Chr1:62110066-62110085	None:intergenic	50.0%
	GTGGCTTCTCCAACTTCAAC+TGG	-	Chr1:62108086-62108105	MsG0180003421.01.T01:intron	50.0%
	GTGTCTCGCATAGTCCATGT+CGG	-	Chr1:62108420-62108439	MsG0180003421.01.T01:intron	50.0%
	TCTGTCTGTCTGTCTGTCTC+AGG	-	Chr1:62106763-62106782	MsG0180003421.01.T01:intron	50.0%
	TGGAGAGGCTGACATGGTAA+CGG	-	Chr1:62108828-62108847	MsG0180003421.01.T01:CDS	50.0%
	TGGTTGGAGTTCGGACTGAT+TGG	+	Chr1:62110046-62110065	None:intergenic	50.0%
	TTCACAGGTCATGACAAGCG+AGG	+	Chr1:62107800-62107819	None:intergenic	50.0%
	TTGGGAGTTAGCTAGGTCCA+TGG	-	Chr1:62109011-62109030	MsG0180003421.01.T01:intron	50.0%
!	CGTGCTGCTGTGACTATTTC+TGG	+	Chr1:62108113-62108132	None:intergenic	50.0%
!!	AGGTAATGGAGAGGCTGACA+TGG	-	Chr1:62108822-62108841	MsG0180003421.01.T01:CDS	50.0%
!!	CTAGGTCAACCTGGTTCTAC+TGG	-	Chr1:62105906-62105925	MsG0180003421.01.T01:intron	50.0%
!!	GGATGGAGAAGTGTCTCATG+TGG	+	Chr1:62108735-62108754	None:intergenic	50.0%
!!	GTAATTGGAGGTGCTGTTGC+TGG	-	Chr1:62107031-62107050	MsG0180003421.01.T01:intron	50.0%
!!!	AAGCGAGGCGTGGTTTTGTA+GGG	+	Chr1:62107785-62107804	None:intergenic	50.0%
!!!	CCGGAACCTTCTTTTTTGGC+CGG	+	Chr1:62110503-62110522	None:intergenic	50.0%
	ACATGCGCAATGGCAACTGC+AGG	+	Chr1:62109933-62109952	None:intergenic	55.0%
	CATGCGCAATGGCAACTGCA+GGG	+	Chr1:62109932-62109951	None:intergenic	55.0%
	CCTCCAATTACTCGACCGTC+AGG	+	Chr1:62107022-62107041	None:intergenic	55.0%
	CCTGACGGTCGAGTAATTGG+AGG	-	Chr1:62107019-62107038	MsG0180003421.01.T01:intron	55.0%
	CTCGTGGGTCGTTGCTTACT+CGG	+	Chr1:62107751-62107770	None:intergenic	55.0%
	GCACCATAAAGCTGCCGTAG+AGG	-	Chr1:62109196-62109215	MsG0180003421.01.T01:intron	55.0%
	GGCATAAGAACTCGAGAGGG+TGG	-	Chr1:62106974-62106993	MsG0180003421.01.T01:CDS	55.0%
	GGTCCTGACGGTCGAGTAAT+TGG	-	Chr1:62107016-62107035	MsG0180003421.01.T01:intron	55.0%
	GTCTCACTAGCTGGTCCTGA+CGG	-	Chr1:62107004-62107023	MsG0180003421.01.T01:intron	55.0%
	GTGGGGAGCTTCGTGTCAAA+TGG	-	Chr1:62108017-62108036	MsG0180003421.01.T01:intron	55.0%
	GTGTCTCATGTGGTCTGCAG+CGG	+	Chr1:62108725-62108744	None:intergenic	55.0%
	GTTTCCAAGCACAGCTGCTG+TGG	-	Chr1:62105618-62105637	MsG0180003421.01.T01:intron	55.0%
!!	GGTCAACCTGGTTCTACTGG+TGG	-	Chr1:62105909-62105928	MsG0180003421.01.T01:intron	55.0%
!!!	CAAGCGAGGCGTGGTTTTGT+AGG	+	Chr1:62107786-62107805	None:intergenic	55.0%
!!!	TTTTGGGGTCCCACCACGTT+GGG	-	Chr1:62109832-62109851	MsG0180003421.01.T01:intron	55.0%
!!!	TTTTTGGGGTCCCACCACGT+TGG	-	Chr1:62109831-62109850	MsG0180003421.01.T01:intron	55.0%
	AGGTCATGACAAGCGAGGCG+TGG	+	Chr1:62107795-62107814	None:intergenic	60.0%
	GAAGGTTCCGGCGAAGGTTC+CGG	-	Chr1:62110512-62110531	MsG0180003421.01.T01:intron	60.0%
	GATATCGCCGGAACCTTCGC+CGG	+	Chr1:62110522-62110541	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	62105180	62110637	62105180	ID=MsG0180003421.01;Name=MsG0180003421.01
Chr1	mRNA	62105180	62110637	62105180	ID=MsG0180003421.01.T01;Parent=MsG0180003421.01;Name=MsG0180003421.01.T01;_AED=0.57;_eAED=0.64;_QI=0\|0\|0\|0.66\|1\|1\|9\|0\|355
Chr1	exon	62110568	62110637	62110568	ID=MsG0180003421.01.T01:exon:23378;Parent=MsG0180003421.01.T01
Chr1	exon	62110139	62110206	62110139	ID=MsG0180003421.01.T01:exon:23377;Parent=MsG0180003421.01.T01
Chr1	exon	62109887	62110001	62109887	ID=MsG0180003421.01.T01:exon:23376;Parent=MsG0180003421.01.T01
Chr1	exon	62109367	62109458	62109367	ID=MsG0180003421.01.T01:exon:23375;Parent=MsG0180003421.01.T01
Chr1	exon	62108736	62108897	62108736	ID=MsG0180003421.01.T01:exon:23374;Parent=MsG0180003421.01.T01
Chr1	exon	62107536	62107806	62107536	ID=MsG0180003421.01.T01:exon:23373;Parent=MsG0180003421.01.T01
Chr1	exon	62106974	62106993	62106974	ID=MsG0180003421.01.T01:exon:23372;Parent=MsG0180003421.01.T01
Chr1	exon	62105472	62105552	62105472	ID=MsG0180003421.01.T01:exon:23371;Parent=MsG0180003421.01.T01
Chr1	exon	62105180	62105368	62105180	ID=MsG0180003421.01.T01:exon:23370;Parent=MsG0180003421.01.T01
Chr1	CDS	62110568	62110637	62110568	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62110139	62110206	62110139	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62109887	62110001	62109887	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62109367	62109458	62109367	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62108736	62108897	62108736	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62107536	62107806	62107536	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62106974	62106993	62106974	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62105472	62105552	62105472	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01
Chr1	CDS	62105180	62105368	62105180	ID=MsG0180003421.01.T01:cds;Parent=MsG0180003421.01.T01

Gene Sequence

>MsG0180003421.01.T01

ATGTTTTCTTCTTCTTTTTCTTTACAATGGAATCTTAAAGTTTTGAACTTGTACTCAAAATGTTTGATGGGTGAGGTGTTTCCAAGCACAGCTGCTGTGGATTTTACACCACATGTAATCACAGTTTATGCAGGAGAGGATGTTGGTGGAAAGATCTTGTCATTTGCACAGAAGAGTCCAAGAGGAATATGCATTCTTTCTGCCAATGGAGCAATCTCTAAAGTTGCACTAGGTCAACCTGGTTCTACTGGTGAATTTGTTATTAGATGCATCATTCACTTGTTTTCAATTTCATCCAAAATATTAGTCCTGCAATTTCAAGGAACAATTTGGGATATTGATAATGGTCGATTTGAGATTCTATCTTTGTCTGGATCTTACACGGCTTCTGACAATAGTGGCATAAGAACTCGAGAGGGTGGATTGAGTGTCTCACTAGCTGGTCCTGACGGTCGAGTAATTGGAGGTGCTGTTGCTGGTGTTCTTATAGCTGCTGGCCCCATACAAATTGTAGTGGGGAGCTTCGTGTCAAATGGTAACAACAACAAGCCTCTTAAAAGGAAGTACCAACGTGAACAAACAGTGGCTTCTCCAACTTCAACTGGTCCAGAAATAGTCACAGCAGCACGACCTATCTCACAAGCAAATATTCATGGTGAAAACTTTATGATACCTATTATGTCTCATCAGCTTCCTGATCAAATCCAGAGAGAATCTATCAATGTTTCAAGTGATAAACTGAACTTAGATGCCACTCCTGATGATGATACTTGGAACAGTAATGGAGAGGCTGACATGGGTAAGGTGCGCAAGTTAACTTGGCTGCGCGACTTAACTGTCGCAAGTGTTAAAGTGTTGCGTGACTTAAGTCACGCCACTATATATAGGGAGATGGTTGACAAAGTCGCGGATGATGACGTTGAACCGAAACCGGCCAAAAAAGAAGGTTCCGGCGAAGGTTCCGGCGATATCAAACCAACCTTTAATTTGAAACCATTTAAAGTCCAAATTCCAATTCAAACTCGAATCGGTAAAATTGAAGTACCTAAACCGGTACCTAATGGTTGA

Protein sequence

>MsG0180003421.01.T01

MFSSSFSLQWNLKVLNLYSKCLMGEVFPSTAAVDFTPHVITVYAGEDVGGKILSFAQKSPRGICILSANGAISKVALGQPGSTGEFVIRCIIHLFSISSKILVLQFQGTIWDIDNGRFEILSLSGSYTASDNSGIRTREGGLSVSLAGPDGRVIGGAVAGVLIAAGPIQIVVGSFVSNGNNNKPLKRKYQREQTVASPTSTGPEIVTAARPISQANIHGENFMIPIMSHQLPDQIQRESINVSSDKLNLDATPDDDTWNSNGEADMGKVRKLTWLRDLTVASVKVLRDLSHATIYREMVDKVADDDVEPKPAKKEGSGEGSGDIKPTFNLKPFKVQIPIQTRIGKIEVPKPVPNG*