AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022302.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022302.01.T01 MTR_4g087360 97.285 221 6 0 1 221 1 221 3.00e-158 454
MsG0480022302.01.T01 MTR_4g087360 88.770 187 5 1 218 404 281 451 1.76e-110 332
MsG0480022302.01.T01 MTR_4g087360 97.285 221 6 0 1 221 29 249 1.34e-157 453
MsG0480022302.01.T01 MTR_4g087360 88.770 187 5 1 218 404 309 479 7.83e-110 332
MsG0480022302.01.T01 MTR_4g087350 62.389 226 69 3 1 225 1 211 1.04e-78 245
MsG0480022302.01.T01 MTR_8g006760 38.000 200 110 4 25 216 53 246 2.15e-34 132
MsG0480022302.01.T01 MTR_7g007590 37.226 137 72 5 14 147 46 171 8.52e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022302.01.T01 AT3G59670 37.053 475 188 19 25 405 56 513 4.38e-61 206
MsG0480022302.01.T01 AT4G37440 37.688 199 106 6 24 220 68 250 3.14e-31 124
MsG0480022302.01.T01 AT4G37440 37.688 199 106 6 24 220 68 250 3.65e-31 124
MsG0480022302.01.T01 AT4G37440 38.000 200 104 7 24 220 68 250 6.24e-31 124
MsG0480022302.01.T01 AT3G50040 38.889 126 64 4 100 218 108 227 3.36e-20 92.0
MsG0480022302.01.T01 AT3G50040 39.286 112 57 2 100 206 108 213 4.32e-20 92.0
MsG0480022302.01.T01 AT3G50040 39.286 112 57 2 100 206 108 213 4.32e-20 92.0
MsG0480022302.01.T01 AT3G50040 39.286 112 57 2 100 206 108 213 4.32e-20 92.0

Find 113 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAAAGTTTGCGTTAATTA+AGG 0.236636 4:-70908805 MsG0480022302.01.T01:five_prime_UTR
CTCTGATGTGGCGTCTAAAA+TGG 0.252327 4:-70907691 MsG0480022302.01.T01:CDS
GCAAGCCCTCATGATACTTT+TGG 0.286985 4:-70908498 MsG0480022302.01.T01:CDS
TGAACTTCAGGAGGTGAAAA+TGG 0.307775 4:-70906000 MsG0480022302.01.T01:CDS
AGTCTTATTCACTGATTATC+AGG 0.308225 4:+70905763 None:intergenic
GACAGCTGTGTTTCAAGCTT+TGG 0.311111 4:-70906615 MsG0480022302.01.T01:CDS
TTTCACCTCCTGAAGCTTCT+GGG 0.320720 4:+70905956 None:intergenic
CTGTACTGGTGACTTGAAAA+TGG 0.334286 4:+70907536 None:intergenic
GTCTGATGCTGATGGCTCTT+TGG 0.338203 4:-70907282 MsG0480022302.01.T01:CDS
TGTTCTGATGCATGAACTTC+AGG 0.338964 4:-70906012 MsG0480022302.01.T01:CDS
CTTTCTTCTTCTTCTTACTT+TGG 0.349971 4:+70911927 None:intergenic
AATTTGCTTGAGTCTTATTT+CGG 0.351566 4:+70907667 None:intergenic
TCTGTTCTTGATGAACAAAT+TGG 0.353691 4:-70908726 MsG0480022302.01.T01:CDS
CAATCCCACCCAGAAGCTTC+AGG 0.360739 4:-70905964 MsG0480022302.01.T01:CDS
CTCAATTATATCAGGAATAC+TGG 0.361289 4:+70906584 None:intergenic
CCATTCCCAGCAGAATTTGT+AGG 0.379539 4:+70906726 None:intergenic
TGAGAGCACTGTTGGTTTGT+TGG 0.381844 4:-70906565 MsG0480022302.01.T01:CDS
GGAATTAAAGTCACCTTGTT+CGG 0.384584 4:+70908466 None:intergenic
GGGGAGCGCAAAGCTGGTTC+AGG 0.393635 4:-70905813 MsG0480022302.01.T01:CDS
TCGGCCTTGGTTGCCGACTC+TGG 0.398219 4:-70906519 MsG0480022302.01.T01:CDS
TCAGAGTTCTTTGGTGAGAA+TGG 0.403213 4:-70908525 MsG0480022302.01.T01:CDS
CTCGAATATTCAGTTGCATC+AGG 0.409498 4:+70908612 None:intergenic
TCCTTAATTAACGCAAACTT+TGG 0.410676 4:+70908804 None:intergenic
GCACATCACCATGAAGAATA+AGG 0.413362 4:+70906769 None:intergenic
ACCTCCTGAAGCTTCTGGGT+GGG 0.414016 4:+70905960 None:intergenic
ATCGGTTGCTGATGGCTCTT+CGG 0.421157 4:-70911737 MsG0480022302.01.T01:five_prime_UTR
TGTCACCCTCCAATCGGCCT+TGG 0.422704 4:-70906532 MsG0480022302.01.T01:CDS
AAGGAGAAGGCGGAAGAGAA+AGG 0.427652 4:-70908786 MsG0480022302.01.T01:five_prime_UTR
ACAGTGCTCTCAATTATATC+AGG 0.430041 4:+70906576 None:intergenic
AGAAGCTTCAGGAGGTGAAA+AGG 0.432992 4:-70905953 MsG0480022302.01.T01:CDS
GAAGTGGATTCAGAGTTCTT+TGG 0.433390 4:-70908534 MsG0480022302.01.T01:CDS
GCATTAACGATCTACTATAT+AGG 0.436953 4:-70911468 MsG0480022302.01.T01:five_prime_UTR
AGAGGAAGTTGACAGATCAT+TGG 0.438955 4:-70907730 MsG0480022302.01.T01:CDS
CATGGCCAATCCCGTCGTTA+AGG 0.441041 4:-70908754 MsG0480022302.01.T01:CDS
TACTTTAGAGAATAAGAAAT+CGG 0.443955 4:-70911755 MsG0480022302.01.T01:intron
CACTGATTATCAGGTTCCCC+AGG 0.459946 4:+70905772 None:intergenic
CAAAGTCCTACAAATTCTGC+TGG 0.460562 4:-70906732 MsG0480022302.01.T01:CDS
AAGATGTACCTGTGCTTGAA+TGG 0.461909 4:-70911528 MsG0480022302.01.T01:five_prime_UTR
TTACCAAGATATGAGAAAAG+AGG 0.475706 4:+70911859 None:intergenic
CCTACAAATTCTGCTGGGAA+TGG 0.476255 4:-70906726 MsG0480022302.01.T01:CDS
AAGCGTGGGGAGCGCAAAGC+TGG 0.481385 4:-70905819 MsG0480022302.01.T01:CDS
GATATAATTGAGAGCACTGT+TGG 0.485330 4:-70906573 MsG0480022302.01.T01:CDS
ACGGCATCTGTTGGAGTTGG+AGG 0.501116 4:-70906699 MsG0480022302.01.T01:CDS
AATGGATACACGGCATCTGT+TGG 0.502595 4:-70906708 MsG0480022302.01.T01:CDS
ATCTACTATATAGGATCGAC+AGG 0.502646 4:-70911459 MsG0480022302.01.T01:five_prime_UTR
GAAGCTTCAGGAGGTGAAAA+GGG 0.504312 4:-70905952 MsG0480022302.01.T01:CDS
AAGCTTGAAACACAGCTGTC+AGG 0.505459 4:+70906618 None:intergenic
ATCTGACATGAGAATAGAAA+CGG 0.514060 4:+70905908 None:intergenic
AAGATGTCATCGATTCAATC+AGG 0.517324 4:-70911432 MsG0480022302.01.T01:five_prime_UTR
AGTCGGCAACCAAGGCCGAT+TGG 0.521202 4:+70906523 None:intergenic
TCAGGAGGTGAAAAGGGAAG+TGG 0.522015 4:-70905946 MsG0480022302.01.T01:CDS
CACCTCCTGAAGCTTCTGGG+TGG 0.522706 4:+70905959 None:intergenic
CTCCACCTTAACGACGGGAT+TGG 0.526761 4:+70908749 None:intergenic
GCAAAGCTGGTTCAGGTGGT+TGG 0.527885 4:-70905806 MsG0480022302.01.T01:CDS
AGTCACCTTGTTCGGAACTC+AGG 0.528629 4:+70908474 None:intergenic
AAGATCAAGTGATGCTGAAG+TGG 0.528838 4:-70908550 MsG0480022302.01.T01:CDS
TGCTGATGTCACCCTCCAAT+CGG 0.529019 4:-70906538 MsG0480022302.01.T01:CDS
TACACGGCATCTGTTGGAGT+TGG 0.531038 4:-70906702 MsG0480022302.01.T01:CDS
AAGTCACCAGTACAGAAGTA+AGG 0.532646 4:-70907528 MsG0480022302.01.T01:CDS
GTGTGACATGGAAACACATA+AGG 0.532666 4:-70911950 None:intergenic
GTGAAAAGGGAAGTGGAAGA+AGG 0.534943 4:-70905939 MsG0480022302.01.T01:CDS
CGGCAACCAAGGCCGATTGG+AGG 0.540629 4:+70906526 None:intergenic
GGCAACCAAGGCCGATTGGA+GGG 0.541238 4:+70906527 None:intergenic
GTTTGCGTTAATTAAGGAGA+AGG 0.542510 4:-70908799 MsG0480022302.01.T01:five_prime_UTR
TGGTTGGAACATGAAGTCCC+TGG 0.544600 4:-70905790 MsG0480022302.01.T01:CDS
GGTTGGAACATGAAGTCCCT+GGG 0.545272 4:-70905789 MsG0480022302.01.T01:CDS
TGGACGAACAAGGGTGATGT+TGG 0.545407 4:-70908654 MsG0480022302.01.T01:CDS
TCAGGAGGTGAAAATGGAAG+TGG 0.551172 4:-70905994 MsG0480022302.01.T01:CDS
GGCCAATCCCGTCGTTAAGG+TGG 0.558790 4:-70908751 MsG0480022302.01.T01:CDS
GATGATTCAACCTCAAGTGT+TGG 0.559589 4:-70911403 MsG0480022302.01.T01:five_prime_UTR
GGAAGTTGACAGATCATTGG+AGG 0.560199 4:-70907727 MsG0480022302.01.T01:CDS
ACAGACTCCACCTTAACGAC+GGG 0.568340 4:+70908744 None:intergenic
AGTAGCTTCTCCAACACTTG+AGG 0.576565 4:+70911393 None:intergenic
GTATCAGTCCATTCAAGCAC+AGG 0.577428 4:+70911520 None:intergenic
TTCACCAGAGTCGGCAACCA+AGG 0.581301 4:+70906515 None:intergenic
GAGCGCAAAGCTGGTTCAGG+TGG 0.583476 4:-70905810 MsG0480022302.01.T01:CDS
AATAAGAAATCGGTTGCTGA+TGG 0.583663 4:-70911745 MsG0480022302.01.T01:five_prime_UTR
ACTCACATGTTCACCAGAGT+CGG 0.590003 4:+70906506 None:intergenic
GTATGACAAGGTAAAGCATA+CGG 0.590399 4:-70907606 MsG0480022302.01.T01:CDS
ATCAGAGTCTGTATCAGCAA+AGG 0.596262 4:+70908587 None:intergenic
TTCTGCTGGGAATGGATACA+CGG 0.600834 4:-70906718 MsG0480022302.01.T01:CDS
AATAAGAAGTCTGATGCTGA+TGG 0.604157 4:-70907290 MsG0480022302.01.T01:CDS
TCGAATATTCAGTTGCATCA+GGG 0.605831 4:+70908613 None:intergenic
TATTGTGAGTTGGACGAACA+AGG 0.606643 4:-70908664 MsG0480022302.01.T01:CDS
GTGTGAATAAAAGAAAGCGT+GGG 0.607422 4:-70905833 MsG0480022302.01.T01:CDS
TTGGTCCTGAGTTCCGAACA+AGG 0.611859 4:-70908479 MsG0480022302.01.T01:intron
CAGATGTTGATATTGTGAGT+TGG 0.612336 4:-70908674 MsG0480022302.01.T01:CDS
TCATAAGAAGTCAAGTGTGA+GGG 0.615256 4:-70910901 MsG0480022302.01.T01:five_prime_UTR
CTCATAAGAAGTCAAGTGTG+AGG 0.615797 4:-70910902 MsG0480022302.01.T01:five_prime_UTR
AAAGTCCTACAAATTCTGCT+GGG 0.619351 4:-70906731 MsG0480022302.01.T01:CDS
AGAGAAAGGTTTAAGAGACA+TGG 0.620727 4:-70908772 MsG0480022302.01.T01:exon
TGCGTTAATTAAGGAGAAGG+CGG 0.622535 4:-70908796 MsG0480022302.01.T01:five_prime_UTR
ATTTCATCCGACCTCTGATG+TGG 0.624861 4:-70907703 MsG0480022302.01.T01:CDS
TGTGTGAATAAAAGAAAGCG+TGG 0.625451 4:-70905834 MsG0480022302.01.T01:CDS
AACAGACTCCACCTTAACGA+CGG 0.636006 4:+70908743 None:intergenic
CAAGATATGAGAAAAGAGGA+TGG 0.638383 4:+70911863 None:intergenic
TCAGGACCAAAAGTATCATG+AGG 0.639160 4:+70908492 None:intergenic
ACTGATTATCAGGTTCCCCA+GGG 0.642728 4:+70905773 None:intergenic
TTAGACGCCACATCAGAGGT+CGG 0.649299 4:+70907696 None:intergenic
AAGACGACGAAAGAAAGTTG+AGG 0.656367 4:-70907495 MsG0480022302.01.T01:CDS
GTTCTTTGGTGAGAATGGCG+CGG 0.661080 4:-70908520 MsG0480022302.01.T01:CDS
ACTTGAGGTTGAATCATCTG+TGG 0.662843 4:+70911408 None:intergenic
AAGAAGAAGAAAGAAAATCG+AGG 0.671977 4:-70911917 MsG0480022302.01.T01:five_prime_UTR
CAGGACCAAAAGTATCATGA+GGG 0.684798 4:+70908493 None:intergenic
AAAGAAAGTTGAGGATACAA+CGG 0.687206 4:-70907486 MsG0480022302.01.T01:CDS
CTGGTGACTTGAAAATGGCA+AGG 0.692316 4:+70907541 None:intergenic
TCCCACCCAGAAGCTTCAGG+AGG 0.699328 4:-70905961 MsG0480022302.01.T01:CDS
TGTGAATAAAAGAAAGCGTG+GGG 0.699887 4:-70905832 MsG0480022302.01.T01:CDS
ATTGTGAGTTGGACGAACAA+GGG 0.703347 4:-70908663 MsG0480022302.01.T01:CDS
AGAACTTGCAGAGTATGACA+AGG 0.715284 4:-70907618 MsG0480022302.01.T01:CDS
GTTGGAACATGAAGTCCCTG+GGG 0.738228 4:-70905788 MsG0480022302.01.T01:CDS
TCTGATGCATGAACTTCAGG+AGG 0.750934 4:-70906009 MsG0480022302.01.T01:CDS
TGACAAGGTAAAGCATACGG+CGG 0.760192 4:-70907603 MsG0480022302.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATATATTAATTTCT+TGG - Chr4:70911537-70911556 MsG0480022302.01.T01:five_prime_UTR 10.0%
!! ATATTTGATATTATTATTGA+CGG + Chr4:70907595-70907614 None:intergenic 10.0%
!! TATTTAAGTGATAATTAATT+GGG - Chr4:70908089-70908108 MsG0480022302.01.T01:intron 10.0%
!! TTAATTATCACTTAAATAAA+TGG + Chr4:70908087-70908106 None:intergenic 10.0%
!! TTATATAATTTGAATTGTAT+TGG + Chr4:70906994-70907013 None:intergenic 10.0%
!! TTATTTAAGTGATAATTAAT+TGG - Chr4:70908088-70908107 MsG0480022302.01.T01:intron 10.0%
!!! GAATGTATTTTTTTTTTTTT+TGG - Chr4:70906717-70906736 MsG0480022302.01.T01:CDS 10.0%
!!! TTATTTATATTTTTGATACA+TGG - Chr4:70909936-70909955 MsG0480022302.01.T01:intron 10.0%
!! AAATGTTTAATATTCAATTC+TGG - Chr4:70908717-70908736 MsG0480022302.01.T01:CDS 15.0%
!! AACAGATTAACAAATTAAAA+GGG + Chr4:70908658-70908677 None:intergenic 15.0%
!! ATGAAAATTAAACATTTCAT+GGG + Chr4:70908757-70908776 None:intergenic 15.0%
!! TAATTAAAGATTTGCATATT+TGG + Chr4:70909268-70909287 None:intergenic 15.0%
!! TAGATAAATTAATCAATGAA+TGG - Chr4:70907839-70907858 MsG0480022302.01.T01:intron 15.0%
!! TATAAATTATTTGTGGAATT+TGG + Chr4:70907345-70907364 None:intergenic 15.0%
!! TATGAAAATTAAACATTTCA+TGG + Chr4:70908758-70908777 None:intergenic 15.0%
!! TATTTGATATTATTATTGAC+GGG + Chr4:70907594-70907613 None:intergenic 15.0%
!! TGTTAAGTATAAATTATTTG+TGG + Chr4:70907352-70907371 None:intergenic 15.0%
!!! AAAAAAATACATTCTGAAAT+TGG + Chr4:70906711-70906730 None:intergenic 15.0%
!!! AATTTGTTAATTGATTGATT+TGG + Chr4:70907801-70907820 None:intergenic 15.0%
!!! ATAAGGATTTTTATATGATA+TGG - Chr4:70908059-70908078 MsG0480022302.01.T01:intron 15.0%
!!! ATACATTTTTACCTTTTTAT+TGG - Chr4:70907995-70908014 MsG0480022302.01.T01:intron 15.0%
!!! ATTAACAAATTTTTCTTTGA+TGG - Chr4:70907810-70907829 MsG0480022302.01.T01:intron 15.0%
!!! TTTTCCACAAAAAAAAAAAA+AGG - Chr4:70907183-70907202 MsG0480022302.01.T01:intron 15.0%
!!! TTTTCCTTTTTTTTTTTTTG+TGG + Chr4:70907190-70907209 None:intergenic 15.0%
!! AAATATGCCTATTAACTATT+AGG + Chr4:70909528-70909547 None:intergenic 20.0%
!! AAATCTTTAATTATCTTCCT+TGG - Chr4:70909275-70909294 MsG0480022302.01.T01:intron 20.0%
!! AAGAGTTAGAATAAAACTAT+GGG + Chr4:70909695-70909714 None:intergenic 20.0%
!! ATATAATCCATAAATCTCAA+AGG - Chr4:70907225-70907244 MsG0480022302.01.T01:intron 20.0%
!! ATTCAAACCTAATAGTTAAT+AGG - Chr4:70909518-70909537 MsG0480022302.01.T01:intron 20.0%
!! ATTTCATACAAAATTGCTAT+CGG + Chr4:70906374-70906393 None:intergenic 20.0%
!! CTTAAAACAACAACTAAAAA+GGG - Chr4:70911574-70911593 MsG0480022302.01.T01:intron 20.0%
!! GAACAGATTAACAAATTAAA+AGG + Chr4:70908659-70908678 None:intergenic 20.0%
!! GAATCGAAATAAATCATATT+TGG + Chr4:70911309-70911328 None:intergenic 20.0%
!! TTTCATATCAACCAATAAAA+AGG + Chr4:70908009-70908028 None:intergenic 20.0%
!!! AAAAAGGAAAAACTTCATTT+TGG - Chr4:70907199-70907218 MsG0480022302.01.T01:intron 20.0%
!!! AGAGTTACAATTGTTTTTTA+GGG - Chr4:70907549-70907568 MsG0480022302.01.T01:CDS 20.0%
!!! AGTTTTTTTATATGCTCTTT+TGG - Chr4:70910715-70910734 MsG0480022302.01.T01:intron 20.0%
!!! ATCTTTTAACAAAAAAACCA+TGG + Chr4:70907033-70907052 None:intergenic 20.0%
!!! ATGGTTTTTTTGTTAAAAGA+TGG - Chr4:70907032-70907051 MsG0480022302.01.T01:intron 20.0%
!!! ATTTCTTATTCTCTAAAGTA+GGG + Chr4:70905955-70905974 None:intergenic 20.0%
!!! GATTCATCAATTTAAAACTA+TGG + Chr4:70907779-70907798 None:intergenic 20.0%
!!! TACTTTAGAGAATAAGAAAT+CGG - Chr4:70905955-70905974 MsG0480022302.01.T01:CDS 20.0%
!!! TCTTTTAACAAAAAAACCAT+GGG + Chr4:70907032-70907051 None:intergenic 20.0%
!!! TGAAATTTTAGATTTTGAAG+AGG - Chr4:70906782-70906801 MsG0480022302.01.T01:CDS 20.0%
! AAATTCAGATCTAAATGACT+TGG - Chr4:70906595-70906614 MsG0480022302.01.T01:CDS 25.0%
! AACTGAATTGTGAAATAGAT+TGG + Chr4:70908631-70908650 None:intergenic 25.0%
! ACAAAATAACAAATGAGAGT+CGG - Chr4:70907941-70907960 MsG0480022302.01.T01:intron 25.0%
! ACAATTCTAACCAAATAATC+CGG + Chr4:70906918-70906937 None:intergenic 25.0%
! ACATTGAAAATCTACAATGT+AGG - Chr4:70910841-70910860 MsG0480022302.01.T01:intron 25.0%
! AGCATATAAAAAAACTGTCA+TGG + Chr4:70910711-70910730 None:intergenic 25.0%
! ATATATAGATGCCTCAAAAT+AGG - Chr4:70907094-70907113 MsG0480022302.01.T01:intron 25.0%
! ATCAAAACACATAATCTTAG+TGG - Chr4:70906651-70906670 MsG0480022302.01.T01:CDS 25.0%
! CAAGAGTTAGAATAAAACTA+TGG + Chr4:70909696-70909715 None:intergenic 25.0%
! CATATTGATAGGTATTTGTT+AGG - Chr4:70911329-70911348 MsG0480022302.01.T01:intron 25.0%
! CATTGAAAATCTACAATGTA+GGG - Chr4:70910842-70910861 MsG0480022302.01.T01:intron 25.0%
! CCTTAAAACAACAACTAAAA+AGG - Chr4:70911573-70911592 MsG0480022302.01.T01:intron 25.0%
! CTAACAAATACCTATCAATA+TGG + Chr4:70911331-70911350 None:intergenic 25.0%
! GATAAATGAATGCCAAAAAA+AGG + Chr4:70905880-70905899 None:intergenic 25.0%
! GATTACTAGGCAAAATTAAA+GGG + Chr4:70910660-70910679 None:intergenic 25.0%
! TACAAAAGCGACAATTAAAA+AGG + Chr4:70911357-70911376 None:intergenic 25.0%
! TACATCAAAATGTGATTACT+AGG + Chr4:70910673-70910692 None:intergenic 25.0%
! TATATAGATGCCTCAAAATA+GGG - Chr4:70907095-70907114 MsG0480022302.01.T01:intron 25.0%
! TATTTCGATTCCATATTGAT+AGG - Chr4:70911318-70911337 MsG0480022302.01.T01:intron 25.0%
! TCGAAATAAATCATATTTGG+TGG + Chr4:70911306-70911325 None:intergenic 25.0%
! TCTTATTGTAATGTCATGTT+TGG - Chr4:70906536-70906555 MsG0480022302.01.T01:CDS 25.0%
! TCTTTCACTTTATTAACCTT+TGG - Chr4:70910622-70910641 MsG0480022302.01.T01:intron 25.0%
! TGATTACTAGGCAAAATTAA+AGG + Chr4:70910661-70910680 None:intergenic 25.0%
! TGTTAAAAGATGGTGTATAT+GGG - Chr4:70907042-70907061 MsG0480022302.01.T01:intron 25.0%
! TTATTCTCTACAGTAAGTAA+AGG + Chr4:70910405-70910424 None:intergenic 25.0%
! TTGTTAAAAGATGGTGTATA+TGG - Chr4:70907041-70907060 MsG0480022302.01.T01:intron 25.0%
! TTTGAACAGGTAAACTAAAA+GGG - Chr4:70908881-70908900 MsG0480022302.01.T01:intron 25.0%
!! AAATAAACTCCCTTTTTGTT+TGG - Chr4:70907293-70907312 MsG0480022302.01.T01:CDS 25.0%
!! CGAATTAATTGACTCTAAAA+AGG + Chr4:70909787-70909806 None:intergenic 25.0%
!! TCTAGTTAGATTGTGTTTTA+TGG - Chr4:70909852-70909871 MsG0480022302.01.T01:intron 25.0%
!! TGGATTTTTGTAGTGAAATT+TGG - Chr4:70906556-70906575 MsG0480022302.01.T01:CDS 25.0%
!! TTTTGAACAGGTAAACTAAA+AGG - Chr4:70908880-70908899 MsG0480022302.01.T01:intron 25.0%
!!! AATTTGCTTGAGTCTTATTT+CGG + Chr4:70910046-70910065 None:intergenic 25.0%
!!! AATTTTAGCCTTATTCTTCA+TGG - Chr4:70910933-70910952 MsG0480022302.01.T01:five_prime_UTR 25.0%
!!! ATGTGAGTTTTCTAAAAGTA+TGG - Chr4:70911219-70911238 MsG0480022302.01.T01:intron 25.0%
!!! ATTTTGAGGCATCTATATAT+AGG + Chr4:70907094-70907113 None:intergenic 25.0%
!!! CAGAGTTACAATTGTTTTTT+AGG - Chr4:70907548-70907567 MsG0480022302.01.T01:CDS 25.0%
!!! CCTTTTTAGTTGTTGTTTTA+AGG + Chr4:70911576-70911595 None:intergenic 25.0%
!!! GACTTTTATTTTACTGCATA+TGG + Chr4:70909393-70909412 None:intergenic 25.0%
!!! GATTTCTTATTCTCTAAAGT+AGG + Chr4:70905956-70905975 None:intergenic 25.0%
!!! TAATCAATGAATGGATTAGA+TGG - Chr4:70907848-70907867 MsG0480022302.01.T01:intron 25.0%
!!! TATGCATTTTGATTTTGAAC+AGG - Chr4:70908868-70908887 MsG0480022302.01.T01:intron 25.0%
!!! TCTTGGTAAAAACCTTTTTT+TGG - Chr4:70905865-70905884 MsG0480022302.01.T01:CDS 25.0%
!!! TGCTTGGTTTTTACATAATT+GGG - Chr4:70908440-70908459 MsG0480022302.01.T01:intron 25.0%
!!! TTGCTTGGTTTTTACATAAT+TGG - Chr4:70908439-70908458 MsG0480022302.01.T01:intron 25.0%
!!! TTTTGAGGCATCTATATATA+GGG + Chr4:70907093-70907112 None:intergenic 25.0%
!!! TTTTTGAAGCCAAACAAAAA+GGG + Chr4:70907305-70907324 None:intergenic 25.0%
!!! TTTTTTGAAGCCAAACAAAA+AGG + Chr4:70907306-70907325 None:intergenic 25.0%
AAAGAAAGTTGAGGATACAA+CGG - Chr4:70910224-70910243 MsG0480022302.01.T01:intron 30.0%
AAGAAGAAGAAAGAAAATCG+AGG - Chr4:70905793-70905812 MsG0480022302.01.T01:CDS 30.0%
AAGATGATTACATTGAAGAG+AGG + Chr4:70908320-70908339 None:intergenic 30.0%
ACACACACATATACACTAAA+AGG - Chr4:70907434-70907453 MsG0480022302.01.T01:intron 30.0%
ATCAAAGCATGCAATATCTA+AGG + Chr4:70909641-70909660 None:intergenic 30.0%
ATCTGACATGAGAATAGAAA+CGG + Chr4:70911805-70911824 None:intergenic 30.0%
ATTCACATACTTCTCTGAAT+TGG + Chr4:70910375-70910394 None:intergenic 30.0%
CTATTTATTGCAACGAGAAA+AGG - Chr4:70911455-70911474 MsG0480022302.01.T01:five_prime_UTR 30.0%
CTCAATTATATCAGGAATAC+TGG + Chr4:70911129-70911148 None:intergenic 30.0%
CTTTCTTCTTCTTCTTACTT+TGG + Chr4:70905786-70905805 None:intergenic 30.0%
GATAGTTTAATGTAGTGTCT+GGG + Chr4:70907975-70907994 None:intergenic 30.0%
GCATTAACGATCTACTATAT+AGG - Chr4:70906242-70906261 MsG0480022302.01.T01:intron 30.0%
TAACATATTGACCTCTAACT+GGG + Chr4:70909430-70909449 None:intergenic 30.0%
TAACTTACCTCAATTCACAT+TGG - Chr4:70908339-70908358 MsG0480022302.01.T01:intron 30.0%
TCCTTAATTAACGCAAACTT+TGG + Chr4:70908909-70908928 None:intergenic 30.0%
TCGTTGCAATAAATAGTGAA+GGG + Chr4:70911451-70911470 None:intergenic 30.0%
TCTGTTCTTGATGAACAAAT+TGG - Chr4:70908984-70909003 MsG0480022302.01.T01:intron 30.0%
TCTTTCATTGAGAGAAAATG+AGG - Chr4:70910541-70910560 MsG0480022302.01.T01:intron 30.0%
TGATAATTAATTGGGTGACT+AGG - Chr4:70908097-70908116 MsG0480022302.01.T01:intron 30.0%
TGATAGTTTAATGTAGTGTC+TGG + Chr4:70907976-70907995 None:intergenic 30.0%
TGATGCTTCAGTAAGAAATT+AGG - Chr4:70909599-70909618 MsG0480022302.01.T01:intron 30.0%
TGGATTTCCTGTATTAATGT+AGG - Chr4:70909956-70909975 MsG0480022302.01.T01:intron 30.0%
TTAACATATTGACCTCTAAC+TGG + Chr4:70909431-70909450 None:intergenic 30.0%
TTACCAAGATATGAGAAAAG+AGG + Chr4:70905854-70905873 None:intergenic 30.0%
TTATGGTGAAGCAAAATTCT+TGG - Chr4:70909869-70909888 MsG0480022302.01.T01:intron 30.0%
TTCACATACTTCTCTGAATT+GGG + Chr4:70910374-70910393 None:intergenic 30.0%
TTGAACAGGTAAACTAAAAG+GGG - Chr4:70908882-70908901 MsG0480022302.01.T01:intron 30.0%
! AAATGCATTTTTCACCAACT+CGG + Chr4:70907165-70907184 None:intergenic 30.0%
! ATGTTACTTGTTTGTTTGTG+TGG - Chr4:70906060-70906079 MsG0480022302.01.T01:intron 30.0%
! ATTTGAACTTCTTTTTCCCA+TGG - Chr4:70907013-70907032 MsG0480022302.01.T01:intron 30.0%
! CATTTTACCTTAAAAGAGTC+TGG - Chr4:70910138-70910157 MsG0480022302.01.T01:intron 30.0%
! GTAGATTTTCAATGTTCTGA+AGG + Chr4:70910836-70910855 None:intergenic 30.0%
! GTTGTTAGCTAAATTTTGCT+TGG - Chr4:70908424-70908443 MsG0480022302.01.T01:intron 30.0%
! TCAACATTTTCATAAGACCA+GGG + Chr4:70909337-70909356 None:intergenic 30.0%
! TTTGAGGCATCTATATATAG+GGG + Chr4:70907092-70907111 None:intergenic 30.0%
! TTTTCTGTTGAATCAACATG+TGG + Chr4:70910757-70910776 None:intergenic 30.0%
!! ATACATTCTGAAATTGGAAG+AGG + Chr4:70906705-70906724 None:intergenic 30.0%
!! TGAATCTTCATTTAGCTCTA+TGG + Chr4:70906146-70906165 None:intergenic 30.0%
!! TTCTAGTTCTAGTCATAAAC+TGG + Chr4:70911271-70911290 None:intergenic 30.0%
!!! CACTATCTTTTTTCCTATCT+CGG - Chr4:70910270-70910289 MsG0480022302.01.T01:intron 30.0%
AAAAAAGCTCATACCGAGAT+AGG + Chr4:70910286-70910305 None:intergenic 35.0%
AAAGTCCTACAAATTCTGCT+GGG - Chr4:70910979-70910998 MsG0480022302.01.T01:intron 35.0%
AACATATTGACCTCTAACTG+GGG + Chr4:70909429-70909448 None:intergenic 35.0%
AAGACAAAACTTCTTACGAC+TGG - Chr4:70911612-70911631 MsG0480022302.01.T01:intron 35.0%
AAGTACTTACAAATCCGAGT+TGG - Chr4:70907148-70907167 MsG0480022302.01.T01:intron 35.0%
AATAAGAAATCGGTTGCTGA+TGG - Chr4:70905965-70905984 MsG0480022302.01.T01:CDS 35.0%
AATAAGAAGTCTGATGCTGA+TGG - Chr4:70910420-70910439 MsG0480022302.01.T01:intron 35.0%
ACAGACAGAAACACTAAACT+AGG - Chr4:70908175-70908194 MsG0480022302.01.T01:intron 35.0%
ACAGTGCTCTCAATTATATC+AGG + Chr4:70911137-70911156 None:intergenic 35.0%
ACATATACACTAAAAGGTGG+TGG - Chr4:70907440-70907459 MsG0480022302.01.T01:intron 35.0%
AGAAAACCTCGAAACATTTC+TGG + Chr4:70910904-70910923 None:intergenic 35.0%
AGACTGAACTTGATTGTGAT+AGG + Chr4:70906966-70906985 None:intergenic 35.0%
AGAGAAAGGTTTAAGAGACA+TGG - Chr4:70908938-70908957 MsG0480022302.01.T01:intron 35.0%
AGCTAGTTGAAAAGTGAGTA+AGG - Chr4:70909464-70909483 MsG0480022302.01.T01:intron 35.0%
ATCAATTGACGATTAGCACA+AGG + Chr4:70909815-70909834 None:intergenic 35.0%
ATCTACTATATAGGATCGAC+AGG - Chr4:70906251-70906270 MsG0480022302.01.T01:intron 35.0%
ATGTAATCCTTCGTAGAAGA+TGG - Chr4:70906504-70906523 MsG0480022302.01.T01:intron 35.0%
ATTCAACTGCATTACGTTTC+TGG - Chr4:70910581-70910600 MsG0480022302.01.T01:intron 35.0%
CAAGATATGAGAAAAGAGGA+TGG + Chr4:70905850-70905869 None:intergenic 35.0%
CACAATCTAACTAGATACAG+TGG + Chr4:70909847-70909866 None:intergenic 35.0%
CACACATATACACTAAAAGG+TGG - Chr4:70907437-70907456 MsG0480022302.01.T01:intron 35.0%
CAGATGTTGATATTGTGAGT+TGG - Chr4:70909036-70909055 MsG0480022302.01.T01:intron 35.0%
CCTCAAAATAGGGTGTATAA+GGG - Chr4:70907105-70907124 MsG0480022302.01.T01:intron 35.0%
CTCGTTGCAATAAATAGTGA+AGG + Chr4:70911452-70911471 None:intergenic 35.0%
CTTCAACAGAATTTCTAACC+TGG + Chr4:70906016-70906035 None:intergenic 35.0%
GCCAAAGTTTGCGTTAATTA+AGG - Chr4:70908905-70908924 MsG0480022302.01.T01:intron 35.0%
GGAATTAAAGTCACCTTGTT+CGG + Chr4:70909247-70909266 None:intergenic 35.0%
GTATGACAAGGTAAAGCATA+CGG - Chr4:70910104-70910123 MsG0480022302.01.T01:intron 35.0%
GTTTGCGTTAATTAAGGAGA+AGG - Chr4:70908911-70908930 MsG0480022302.01.T01:intron 35.0%
TCAAATTGTCACCTGACTTA+CGG - Chr4:70907879-70907898 MsG0480022302.01.T01:intron 35.0%
TCACATACTTCTCTGAATTG+GGG + Chr4:70910373-70910392 None:intergenic 35.0%
TCATAAGAAGTCAAGTGTGA+GGG - Chr4:70906809-70906828 MsG0480022302.01.T01:intron 35.0%
TCCTCTTCCTACATTAATAC+AGG + Chr4:70909966-70909985 None:intergenic 35.0%
TCCTGTATTAATGTAGGAAG+AGG - Chr4:70909962-70909981 MsG0480022302.01.T01:intron 35.0%
TCGAATATTCAGTTGCATCA+GGG + Chr4:70909100-70909119 None:intergenic 35.0%
TGAACAGGTAAACTAAAAGG+GGG - Chr4:70908883-70908902 MsG0480022302.01.T01:intron 35.0%
TGTAATCCTTCGTAGAAGAT+GGG - Chr4:70906505-70906524 MsG0480022302.01.T01:intron 35.0%
TGTGTGAATAAAAGAAAGCG+TGG - Chr4:70911876-70911895 MsG0480022302.01.T01:five_prime_UTR 35.0%
TTAGCATATCATTAGCAGCA+AGG + Chr4:70910483-70910502 None:intergenic 35.0%
TTCATTGAGAGAAAATGAGG+AGG - Chr4:70910544-70910563 MsG0480022302.01.T01:intron 35.0%
TTGTGCTAATCGTCAATTGA+TGG - Chr4:70909814-70909833 MsG0480022302.01.T01:intron 35.0%
TTTCACATGTCATATACAGC+TGG + Chr4:70909571-70909590 None:intergenic 35.0%
! ACGCTTTCTTTTATTCACAC+AGG + Chr4:70911877-70911896 None:intergenic 35.0%
! CATCCTCTTTTCTCATATCT+TGG - Chr4:70905848-70905867 MsG0480022302.01.T01:CDS 35.0%
! CTCAACATTTTCATAAGACC+AGG + Chr4:70909338-70909357 None:intergenic 35.0%
! GTGTGAATAAAAGAAAGCGT+GGG - Chr4:70911877-70911896 MsG0480022302.01.T01:five_prime_UTR 35.0%
! TGTGAATAAAAGAAAGCGTG+GGG - Chr4:70911878-70911897 MsG0480022302.01.T01:five_prime_UTR 35.0%
! TTTCGAACCAGACTCTTTTA+AGG + Chr4:70910148-70910167 None:intergenic 35.0%
!! AAGATGTCATCGATTCAATC+AGG - Chr4:70906278-70906297 MsG0480022302.01.T01:intron 35.0%
!! AATCTGTTCTGCTTTTGCAA+TGG - Chr4:70908670-70908689 MsG0480022302.01.T01:CDS 35.0%
!! ATTTTAACAGCACTAGTGAG+TGG + Chr4:70910510-70910529 None:intergenic 35.0%
!! CAAGCAGTTGGTAAACAATA+AGG + Chr4:70905931-70905950 None:intergenic 35.0%
!! CAATGAATGGATTAGATGGA+CGG - Chr4:70907852-70907871 MsG0480022302.01.T01:intron 35.0%
!! GATATAATTGAGAGCACTGT+TGG - Chr4:70911137-70911156 MsG0480022302.01.T01:intron 35.0%
!! GATGAAGATTTTGACAATCC+AGG - Chr4:70905995-70906014 MsG0480022302.01.T01:CDS 35.0%
!! GATGATGATTTTGACAATCC+GGG - Chr4:70910450-70910469 MsG0480022302.01.T01:intron 35.0%
!! GGATGATGATTTTGACAATC+CGG - Chr4:70910449-70910468 MsG0480022302.01.T01:intron 35.0%
!! GTCCTTTTTCATATACTGGT+CGG + Chr4:70909315-70909334 None:intergenic 35.0%
AACTATGGGTGATGAACAGT+TGG + Chr4:70909681-70909700 None:intergenic 40.0%
AAGACGACGAAAGAAAGTTG+AGG - Chr4:70910215-70910234 MsG0480022302.01.T01:intron 40.0%
AAGATCAAGTGATGCTGAAG+TGG - Chr4:70909160-70909179 MsG0480022302.01.T01:intron 40.0%
AAGATGTACCTGTGCTTGAA+TGG - Chr4:70906182-70906201 MsG0480022302.01.T01:intron 40.0%
AAGTCACCAGTACAGAAGTA+AGG - Chr4:70910182-70910201 MsG0480022302.01.T01:intron 40.0%
ACAAAACTTCTTACGACTGG+TGG - Chr4:70911615-70911634 MsG0480022302.01.T01:intron 40.0%
ACTCGAAACACCGGATTATT+TGG - Chr4:70906905-70906924 MsG0480022302.01.T01:intron 40.0%
ACTTGAGGTTGAATCATCTG+TGG + Chr4:70906305-70906324 None:intergenic 40.0%
AGAACTTGCAGAGTATGACA+AGG - Chr4:70910092-70910111 MsG0480022302.01.T01:intron 40.0%
AGAGGAAGTTGACAGATCAT+TGG - Chr4:70909980-70909999 MsG0480022302.01.T01:intron 40.0%
ATCAGAGTCTGTATCAGCAA+AGG + Chr4:70909126-70909145 None:intergenic 40.0%
CAAAGTCCTACAAATTCTGC+TGG - Chr4:70910978-70910997 MsG0480022302.01.T01:intron 40.0%
CACATACTTCTCTGAATTGG+GGG + Chr4:70910372-70910391 None:intergenic 40.0%
CAGCATTCCAATGTGAATTG+AGG + Chr4:70908349-70908368 None:intergenic 40.0%
CAGTATATGAAAAAGGACCC+TGG - Chr4:70909317-70909336 MsG0480022302.01.T01:intron 40.0%
CTAACAATGACTCGAAACAC+CGG - Chr4:70906896-70906915 MsG0480022302.01.T01:intron 40.0%
CTCATAAGAAGTCAAGTGTG+AGG - Chr4:70906808-70906827 MsG0480022302.01.T01:intron 40.0%
CTCGAATATTCAGTTGCATC+AGG + Chr4:70909101-70909120 None:intergenic 40.0%
GACCGACCAGTATATGAAAA+AGG - Chr4:70909310-70909329 MsG0480022302.01.T01:intron 40.0%
GACGATGTTTCAACGTTTCA+AGG - Chr4:70907488-70907507 MsG0480022302.01.T01:CDS 40.0%
GATGATTCAACCTCAAGTGT+TGG - Chr4:70906307-70906326 MsG0480022302.01.T01:intron 40.0%
GATGTTTCAACGTTTCAAGG+TGG - Chr4:70907491-70907510 MsG0480022302.01.T01:CDS 40.0%
GCACATCACCATGAAGAATA+AGG + Chr4:70910944-70910963 None:intergenic 40.0%
GCCTCAAAATAGGGTGTATA+AGG - Chr4:70907104-70907123 MsG0480022302.01.T01:intron 40.0%
TAACTGGGGACTCTTATCTA+AGG + Chr4:70909415-70909434 None:intergenic 40.0%
TCAGAGTTCTTTGGTGAGAA+TGG - Chr4:70909185-70909204 MsG0480022302.01.T01:intron 40.0%
TGAACTTCAGGAGGTGAAAA+TGG - Chr4:70911710-70911729 MsG0480022302.01.T01:intron 40.0%
TGCGTTAATTAAGGAGAAGG+CGG - Chr4:70908914-70908933 MsG0480022302.01.T01:intron 40.0%
TGCTAATCGTCAATTGATGG+CGG - Chr4:70909817-70909836 MsG0480022302.01.T01:intron 40.0%
TGTTCTGATGCATGAACTTC+AGG - Chr4:70911698-70911717 MsG0480022302.01.T01:intron 40.0%
TGTTGGATCTACCAAAAACG+AGG - Chr4:70909073-70909092 MsG0480022302.01.T01:intron 40.0%
! ATTGTGAGTTGGACGAACAA+GGG - Chr4:70909047-70909066 MsG0480022302.01.T01:intron 40.0%
! CCCTTATACACCCTATTTTG+AGG + Chr4:70907108-70907127 None:intergenic 40.0%
! CTGTACTGGTGACTTGAAAA+TGG + Chr4:70910177-70910196 None:intergenic 40.0%
! GAAGTGGATTCAGAGTTCTT+TGG - Chr4:70909176-70909195 MsG0480022302.01.T01:intron 40.0%
! TATTGTGAGTTGGACGAACA+AGG - Chr4:70909046-70909065 MsG0480022302.01.T01:intron 40.0%
! TTTTCGCCTTACTTCTGTAC+TGG + Chr4:70910191-70910210 None:intergenic 40.0%
!! CAAAGCGCCTTTGAGATTTA+TGG + Chr4:70907235-70907254 None:intergenic 40.0%
!! CAGGACCAAAAGTATCATGA+GGG + Chr4:70909220-70909239 None:intergenic 40.0%
!! CAGGGTCCTTTTTCATATAC+TGG + Chr4:70909319-70909338 None:intergenic 40.0%
!! GCAAGCAGTTGGTAACAATA+AGG + Chr4:70910350-70910369 None:intergenic 40.0%
!! TCAAAGGCGCTTTGAGAATA+TGG - Chr4:70907241-70907260 MsG0480022302.01.T01:intron 40.0%
!! TCAGGACCAAAAGTATCATG+AGG + Chr4:70909221-70909240 None:intergenic 40.0%
!! TGACATTGATGATGCACAGA+TGG - Chr4:70911668-70911687 MsG0480022302.01.T01:intron 40.0%
AAACTTCTTACGACTGGTGG+TGG - Chr4:70911618-70911637 MsG0480022302.01.T01:intron 45.0%
AACAGACTCCACCTTAACGA+CGG + Chr4:70908970-70908989 None:intergenic 45.0%
AAGCTTGAAACACAGCTGTC+AGG + Chr4:70911095-70911114 None:intergenic 45.0%
AATGGATACACGGCATCTGT+TGG - Chr4:70911002-70911021 MsG0480022302.01.T01:intron 45.0%
ACTCACATGTTCACCAGAGT+CGG + Chr4:70911207-70911226 None:intergenic 45.0%
ACTGATTATCAGGTTCCCCA+GGG + Chr4:70911940-70911959 None:intergenic 45.0%
AGAAGCTTCAGGAGGTGAAA+AGG - Chr4:70911757-70911776 MsG0480022302.01.T01:intron 45.0%
AGATAAGAGTCCCCAGTTAG+AGG - Chr4:70909416-70909435 MsG0480022302.01.T01:intron 45.0%
AGTAGCTTCTCCAACACTTG+AGG + Chr4:70906320-70906339 None:intergenic 45.0%
AGTGTCGTGCATTTGAGCAA+AGG + Chr4:70910793-70910812 None:intergenic 45.0%
ATACCATCATCTCACTCCTC+AGG - Chr4:70908257-70908276 MsG0480022302.01.T01:intron 45.0%
ATGAACGTGCGAGCATGTAT+TGG + Chr4:70908294-70908313 None:intergenic 45.0%
ATTTCATCCGACCTCTGATG+TGG - Chr4:70910007-70910026 MsG0480022302.01.T01:intron 45.0%
CCATTCCCAGCAGAATTTGT+AGG + Chr4:70910987-70911006 None:intergenic 45.0%
CCTACAAATTCTGCTGGGAA+TGG - Chr4:70910984-70911003 MsG0480022302.01.T01:intron 45.0%
CTAAAGTAGGGACAAGCAGT+TGG + Chr4:70905943-70905962 None:intergenic 45.0%
CTCTGATGTGGCGTCTAAAA+TGG - Chr4:70910019-70910038 MsG0480022302.01.T01:intron 45.0%
CTGGTGACTTGAAAATGGCA+AGG + Chr4:70910172-70910191 None:intergenic 45.0%
GAAACGTTGAAACATCGTCG+TGG + Chr4:70907487-70907506 None:intergenic 45.0%
GAAGCTTCAGGAGGTGAAAA+GGG - Chr4:70911758-70911777 MsG0480022302.01.T01:intron 45.0%
GACAGCTGTGTTTCAAGCTT+TGG - Chr4:70911095-70911114 MsG0480022302.01.T01:intron 45.0%
GGAAGTTGACAGATCATTGG+AGG - Chr4:70909983-70910002 MsG0480022302.01.T01:intron 45.0%
GTATCAGTCCATTCAAGCAC+AGG + Chr4:70906193-70906212 None:intergenic 45.0%
GTGAAAAGGGAAGTGGAAGA+AGG - Chr4:70911771-70911790 MsG0480022302.01.T01:intron 45.0%
TAGCAGCAAGGATACTAACC+CGG + Chr4:70910471-70910490 None:intergenic 45.0%
TCACGTCCAGAAATGTTTCG+AGG - Chr4:70910895-70910914 MsG0480022302.01.T01:five_prime_UTR 45.0%
TCAGGAGGTGAAAATGGAAG+TGG - Chr4:70911716-70911735 MsG0480022302.01.T01:five_prime_UTR 45.0%
TCTGATGCATGAACTTCAGG+AGG - Chr4:70911701-70911720 MsG0480022302.01.T01:intron 45.0%
TGACAAGGTAAAGCATACGG+CGG - Chr4:70910107-70910126 MsG0480022302.01.T01:intron 45.0%
TGCTCATGTTTCCGTAAGTC+AGG + Chr4:70907893-70907912 None:intergenic 45.0%
TGGTTGACGACAGATCATGA+CGG - Chr4:70907511-70907530 MsG0480022302.01.T01:CDS 45.0%
TGTGTGAGAAGAGAGATTGG+TGG - Chr4:70907268-70907287 MsG0480022302.01.T01:CDS 45.0%
TTCTGCTGGGAATGGATACA+CGG - Chr4:70910992-70911011 MsG0480022302.01.T01:intron 45.0%
TTTCACCTCCTGAAGCTTCT+GGG + Chr4:70911757-70911776 None:intergenic 45.0%
! CATTTTAGACGCCACATCAG+AGG + Chr4:70910021-70910040 None:intergenic 45.0%
! GCAAGCCCTCATGATACTTT+TGG - Chr4:70909212-70909231 MsG0480022302.01.T01:intron 45.0%
! GGAGTGAGATGATGGTATAG+CGG + Chr4:70908255-70908274 None:intergenic 45.0%
! TTTTCACCTCCTGAAGCTTC+TGG + Chr4:70911758-70911777 None:intergenic 45.0%
!! AAGGCGCTTTGAGAATATGG+AGG - Chr4:70907244-70907263 MsG0480022302.01.T01:intron 45.0%
!! AGGCGCTTTGAGAATATGGA+GGG - Chr4:70907245-70907264 MsG0480022302.01.T01:intron 45.0%
!! ATTGGAAGAGAGAGTACCTG+AGG + Chr4:70908276-70908295 None:intergenic 45.0%
!! TGAATGGATTAGATGGACGG+TGG - Chr4:70907855-70907874 MsG0480022302.01.T01:intron 45.0%
!! TGAGAGCACTGTTGGTTTGT+TGG - Chr4:70911145-70911164 MsG0480022302.01.T01:intron 45.0%
!!! TGATGCCACTTTTCAGTGTG+CGG + Chr4:70910869-70910888 None:intergenic 45.0%
!! TAATAAATTGTATTAAAATA+AGG - Chr4:70908042-70908061 MsG0480022302.01.T01:intron 5.0%
!!! AGAATATTAAAATTTTAAAT+AGG - Chr4:70906750-70906769 MsG0480022302.01.T01:CDS 5.0%
AAGGAGAAGGCGGAAGAGAA+AGG - Chr4:70908924-70908943 MsG0480022302.01.T01:intron 50.0%
ACAGACTCCACCTTAACGAC+GGG + Chr4:70908969-70908988 None:intergenic 50.0%
AGGGAGATCACTACTGCCAA+AGG + Chr4:70910641-70910660 None:intergenic 50.0%
AGTCACCTTGTTCGGAACTC+AGG + Chr4:70909239-70909258 None:intergenic 50.0%
ATCGGTTGCTGATGGCTCTT+CGG - Chr4:70905973-70905992 MsG0480022302.01.T01:CDS 50.0%
ATGGGTGATGAACAGTTGGC+TGG + Chr4:70909677-70909696 None:intergenic 50.0%
CGGTCGCTAACAAATGTCCA+AGG + Chr4:70909295-70909314 None:intergenic 50.0%
GACAGATCATGACGGTGGAT+TGG - Chr4:70907519-70907538 MsG0480022302.01.T01:CDS 50.0%
GCTCTACCCATCTTCTACGA+AGG + Chr4:70906514-70906533 None:intergenic 50.0%
GGGTGTGTGAGAAGAGAGAT+TGG - Chr4:70907265-70907284 MsG0480022302.01.T01:CDS 50.0%
GGTTGGAACATGAAGTCCCT+GGG - Chr4:70911921-70911940 MsG0480022302.01.T01:five_prime_UTR 50.0%
GTACCTGAGGAGTGAGATGA+TGG + Chr4:70908263-70908282 None:intergenic 50.0%
GTCTGATGCTGATGGCTCTT+TGG - Chr4:70910428-70910447 MsG0480022302.01.T01:intron 50.0%
GTTCTTTGGTGAGAATGGCG+CGG - Chr4:70909190-70909209 MsG0480022302.01.T01:intron 50.0%
GTTGGAACATGAAGTCCCTG+GGG - Chr4:70911922-70911941 MsG0480022302.01.T01:five_prime_UTR 50.0%
TACACGGCATCTGTTGGAGT+TGG - Chr4:70911008-70911027 MsG0480022302.01.T01:intron 50.0%
TCAGGAGGTGAAAAGGGAAG+TGG - Chr4:70911764-70911783 MsG0480022302.01.T01:intron 50.0%
TCGTGGTCGCTGGTCAATAA+TGG + Chr4:70907470-70907489 None:intergenic 50.0%
TGCTGATGTCACCCTCCAAT+CGG - Chr4:70911172-70911191 MsG0480022302.01.T01:intron 50.0%
TGGACGAACAAGGGTGATGT+TGG - Chr4:70909056-70909075 MsG0480022302.01.T01:intron 50.0%
TGGTCGCTGGTCAATAATGG+AGG + Chr4:70907467-70907486 None:intergenic 50.0%
TGGTTGGAACATGAAGTCCC+TGG - Chr4:70911920-70911939 MsG0480022302.01.T01:five_prime_UTR 50.0%
TTAGACGCCACATCAGAGGT+CGG + Chr4:70910017-70910036 None:intergenic 50.0%
TTGACGACAGATCATGACGG+TGG - Chr4:70907514-70907533 MsG0480022302.01.T01:CDS 50.0%
TTGGTCCTGAGTTCCGAACA+AGG - Chr4:70909231-70909250 MsG0480022302.01.T01:intron 50.0%
! CACTGATTATCAGGTTCCCC+AGG + Chr4:70911941-70911960 None:intergenic 50.0%
! GATGATGGTATAGCGGCTGA+TGG + Chr4:70908248-70908267 None:intergenic 50.0%
! TGCATCAGGGTCCTCGTTTT+TGG + Chr4:70909087-70909106 None:intergenic 50.0%
!! GTTCTGAAGGAGCAGCTCAA+AGG + Chr4:70910823-70910842 None:intergenic 50.0%
ACCTCCTGAAGCTTCTGGGT+GGG + Chr4:70911753-70911772 None:intergenic 55.0%
ACGGCATCTGTTGGAGTTGG+AGG - Chr4:70911011-70911030 MsG0480022302.01.T01:intron 55.0%
AGGGTCCGCACACTGAAAAG+TGG - Chr4:70910861-70910880 MsG0480022302.01.T01:intron 55.0%
CAATCCCACCCAGAAGCTTC+AGG - Chr4:70911746-70911765 MsG0480022302.01.T01:five_prime_UTR 55.0%
CATGGCCAATCCCGTCGTTA+AGG - Chr4:70908956-70908975 MsG0480022302.01.T01:intron 55.0%
CTCCACCTTAACGACGGGAT+TGG + Chr4:70908964-70908983 None:intergenic 55.0%
CTGAATTGGGGGCAAGCAGT+TGG + Chr4:70910361-70910380 None:intergenic 55.0%
GATGGTATAGCGGCTGATGG+TGG + Chr4:70908245-70908264 None:intergenic 55.0%
TGAAACATCGTCGTGGTCGC+TGG + Chr4:70907480-70907499 None:intergenic 55.0%
TTCACCAGAGTCGGCAACCA+AGG + Chr4:70911198-70911217 None:intergenic 55.0%
! GCAAAGCTGGTTCAGGTGGT+TGG - Chr4:70911904-70911923 MsG0480022302.01.T01:five_prime_UTR 55.0%
AGTCGGCAACCAAGGCCGAT+TGG + Chr4:70911190-70911209 None:intergenic 60.0%
CACCTCCTGAAGCTTCTGGG+TGG + Chr4:70911754-70911773 None:intergenic 60.0%
GGCAACCAAGGCCGATTGGA+GGG + Chr4:70911186-70911205 None:intergenic 60.0%
GGCCAATCCCGTCGTTAAGG+TGG - Chr4:70908959-70908978 MsG0480022302.01.T01:intron 60.0%
TCCCACCCAGAAGCTTCAGG+AGG - Chr4:70911749-70911768 MsG0480022302.01.T01:five_prime_UTR 60.0%
TGTCACCCTCCAATCGGCCT+TGG - Chr4:70911178-70911197 MsG0480022302.01.T01:intron 60.0%
! GAGCGCAAAGCTGGTTCAGG+TGG - Chr4:70911900-70911919 MsG0480022302.01.T01:five_prime_UTR 60.0%
CGGCAACCAAGGCCGATTGG+AGG + Chr4:70911187-70911206 None:intergenic 65.0%
! AAGCGTGGGGAGCGCAAAGC+TGG - Chr4:70911891-70911910 MsG0480022302.01.T01:five_prime_UTR 65.0%
! GGGGAGCGCAAAGCTGGTTC+AGG - Chr4:70911897-70911916 MsG0480022302.01.T01:five_prime_UTR 65.0%
!! TCGGCCTTGGTTGCCGACTC+TGG - Chr4:70911191-70911210 MsG0480022302.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 70905767 70911965 70905767 ID=MsG0480022302.01;Name=MsG0480022302.01
Chr4 mRNA 70905767 70911965 70905767 ID=MsG0480022302.01.T01;Parent=MsG0480022302.01;Name=MsG0480022302.01.T01;_AED=0.50;_eAED=0.65;_QI=501|0|0|1|1|0.88|9|0|410
Chr4 exon 70911863 70911965 70911863 ID=MsG0480022302.01.T01:exon:5451;Parent=MsG0480022302.01.T01
Chr4 exon 70911716 70911769 70911716 ID=MsG0480022302.01.T01:exon:5452;Parent=MsG0480022302.01.T01
Chr4 exon 70911377 70911583 70911377 ID=MsG0480022302.01.T01:exon:5453;Parent=MsG0480022302.01.T01
Chr4 exon 70910879 70910960 70910879 ID=MsG0480022302.01.T01:exon:5454;Parent=MsG0480022302.01.T01
Chr4 exon 70908480 70908830 70908480 ID=MsG0480022302.01.T01:exon:5455;Parent=MsG0480022302.01.T01
Chr4 exon 70907441 70907754 70907441 ID=MsG0480022302.01.T01:exon:5456;Parent=MsG0480022302.01.T01
Chr4 exon 70907261 70907314 70907261 ID=MsG0480022302.01.T01:exon:5457;Parent=MsG0480022302.01.T01
Chr4 exon 70906512 70906801 70906512 ID=MsG0480022302.01.T01:exon:5458;Parent=MsG0480022302.01.T01
Chr4 exon 70905767 70906045 70905767 ID=MsG0480022302.01.T01:exon:5459;Parent=MsG0480022302.01.T01
Chr4 five_prime_UTR 70911863 70911965 70911863 ID=MsG0480022302.01.T01:five_prime_utr;Parent=MsG0480022302.01.T01
Chr4 five_prime_UTR 70911716 70911769 70911716 ID=MsG0480022302.01.T01:five_prime_utr;Parent=MsG0480022302.01.T01
Chr4 five_prime_UTR 70911377 70911583 70911377 ID=MsG0480022302.01.T01:five_prime_utr;Parent=MsG0480022302.01.T01
Chr4 five_prime_UTR 70910879 70910960 70910879 ID=MsG0480022302.01.T01:five_prime_utr;Parent=MsG0480022302.01.T01
Chr4 five_prime_UTR 70908776 70908830 70908776 ID=MsG0480022302.01.T01:five_prime_utr;Parent=MsG0480022302.01.T01
Chr4 CDS 70908480 70908775 70908480 ID=MsG0480022302.01.T01:cds;Parent=MsG0480022302.01.T01
Chr4 CDS 70907441 70907754 70907441 ID=MsG0480022302.01.T01:cds;Parent=MsG0480022302.01.T01
Chr4 CDS 70907261 70907314 70907261 ID=MsG0480022302.01.T01:cds;Parent=MsG0480022302.01.T01
Chr4 CDS 70906512 70906801 70906512 ID=MsG0480022302.01.T01:cds;Parent=MsG0480022302.01.T01
Chr4 CDS 70905767 70906045 70905767 ID=MsG0480022302.01.T01:cds;Parent=MsG0480022302.01.T01
Gene Sequence

>MsG0480022302.01.T01

ATGGCCAATCCCGTCGTTAAGGTGGAGTCTGTTCTTGATGAACAAATTGGCTCTACAAGTTCTAAAGTATTTGAAGACACAGATGTTGATATTGTGAGTTGGACGAACAAGGGTGATGTTGGATCTACCAAAAACGAGGACCCTGATGCAACTGAATATTCGAGTTCCTTTGCTGATACAGACTCTGATGCTGAAAATAGTTCAAGATCAAGTGATGCTGAAGTGGATTCAGAGTTCTTTGGTGAGAATGGCGCGGCAAGCCCTCATGATACTTTTGGTCCTGAGTTCCGAACAAGGAAGAGGAAGTTGACAGATCATTGGAGGAATTTCATCCGACCTCTGATGTGGCGTCTAAAATGGACCGAAATAAGACTCAAGCAAATTGAGTCACAAGAGTTAAAGTACAGTAGAGAACTTGCAGAGTATGACAAGGTAAAGCATACGGCGGCACGCGATCATTTTACCTTAAAAGAGTCTGGTTCGAAATCCTTGCCATTTTCAAGTCACCAGTACAGAAGTAAGGCGAAAATGAGAAGACGACGAAAGAAAGTTGAGGATACAACGGACATAGCATCGTATGCAGCACATCACTATCTTTTTTCCTATCTCGAGAATAAGAAGTCTGATGCTGATGGCTCTTTGGATGATGATTTTGACAATCCGGAGAATTTTAGCCTTATTCTTCATGGTGATGTGCAGACTAGCTCTGCTCAAAGTCCTACAAATTCTGCTGGGAATGGATACACGGCATCTGTTGGAGTTGGAGGTATATATAATTCATCTCAGCATGCAGCTGATGAGTTTGAATTTGCAGACTTTGTCTTTCCTGACAGCTGTGTTTCAAGCTTTGGAGAAGCTACCAGTATTCCTGATATAATTGAGAGCACTGTTGGTTTGTTGGCTGCTGCTGATGTCACCCTCCAATCGGCCTTGGTTGCCGACTCTGGTGAACATATGGTAGAAAATGTTCTGATGCATGAACTTCAGGAGGTGAAAATGGAAGTGGAAGCTCACAATCCCACCCAGAAGCTTCAGGAGGTGAAAAGGGAAGTGGAAGAAGGTTCACATTCCGTTTCTATTCTCATGTCAGATAATGTAGCAACAACAACTTGCACGTCTCAAGAGCAATCAGCTCTCAAGACCTGTGTGAATAAAAGAAAGCGTGGGGAGCGCAAAGCTGGTTCAGGTGGTTGGAACATGAAGTCCCTGGGGAACCTGATAATCAGTGAATAA

Protein sequence

>MsG0480022302.01.T01

MANPVVKVESVLDEQIGSTSSKVFEDTDVDIVSWTNKGDVGSTKNEDPDATEYSSSFADTDSDAENSSRSSDAEVDSEFFGENGAASPHDTFGPEFRTRKRKLTDHWRNFIRPLMWRLKWTEIRLKQIESQELKYSRELAEYDKVKHTAARDHFTLKESGSKSLPFSSHQYRSKAKMRRRRKKVEDTTDIASYAAHHYLFSYLENKKSDADGSLDDDFDNPENFSLILHGDVQTSSAQSPTNSAGNGYTASVGVGGIYNSSQHAADEFEFADFVFPDSCVSSFGEATSIPDIIESTVGLLAAADVTLQSALVADSGEHMVENVLMHELQEVKMEVEAHNPTQKLQEVKREVEEGSHSVSILMSDNVATTTCTSQEQSALKTCVNKRKRGERKAGSGGWNMKSLGNLIISE*