Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042795.01.T01 | GAU33035.1 | 78.889 | 90 | 18 | 1 | 6 | 95 | 56 | 144 | 6.01E-42 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042795.01.T01 | Q9LQI7 | 49.153 | 118 | 31 | 3 | 6 | 95 | 56 | 172 | 7.15E-29 | 106 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042795.01.T01 | A0A2Z6NAN2 | 78.889 | 90 | 18 | 1 | 6 | 95 | 56 | 144 | 2.87e-42 | 146 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048152.01 | MsG0880042795.01 | 0.827653 | 1.389539e-54 | 1.349762e-51 |
| MsG0080048383.01 | MsG0880042795.01 | 0.803941 | 2.741566e-49 | 1.395716e-46 |
| MsG0080048687.01 | MsG0880042795.01 | 0.837950 | 3.840028e-57 | 5.067665e-54 |
| MsG0080048784.01 | MsG0880042795.01 | 0.819454 | 1.151893e-52 | 8.868361e-50 |
| MsG0080049135.01 | MsG0880042795.01 | 0.801431 | 9.032136e-49 | 4.312665e-46 |
| MsG0180000023.01 | MsG0880042795.01 | 0.823971 | 1.039223e-53 | 9.083917e-51 |
| MsG0180000139.01 | MsG0880042795.01 | 0.804829 | 1.790278e-49 | 9.324861e-47 |
| MsG0180000331.01 | MsG0880042795.01 | 0.832769 | 7.824742e-56 | 8.832640e-53 |
| MsG0180000339.01 | MsG0880042795.01 | 0.801917 | 7.181102e-49 | 3.471275e-46 |
| MsG0180000355.01 | MsG0880042795.01 | 0.826597 | 2.486516e-54 | 2.342289e-51 |
| MsG0180000384.01 | MsG0880042795.01 | 0.818759 | 1.657550e-52 | 1.251821e-49 |
| MsG0180000611.01 | MsG0880042795.01 | 0.811094 | 8.314365e-51 | 5.100202e-48 |
| MsG0180000806.01 | MsG0880042795.01 | 0.801925 | 7.153140e-49 | 3.458442e-46 |
| MsG0180000824.01 | MsG0880042795.01 | 0.823392 | 1.419695e-53 | 1.220689e-50 |
| MsG0180001153.01 | MsG0880042795.01 | 0.814097 | 1.832627e-51 | 1.218335e-48 |
| MsG0180001235.01 | MsG0880042795.01 | 0.814443 | 1.536735e-51 | 1.031295e-48 |
| MsG0180002547.01 | MsG0880042795.01 | 0.822600 | 2.172346e-53 | 1.826860e-50 |
| MsG0180003094.01 | MsG0880042795.01 | 0.807562 | 4.758295e-50 | 2.658738e-47 |
| MsG0180003181.01 | MsG0880042795.01 | 0.808309 | 3.299084e-50 | 1.880002e-47 |
| MsG0180003493.01 | MsG0880042795.01 | 0.823434 | 1.388240e-53 | 1.195122e-50 |
| MsG0180003651.01 | MsG0880042795.01 | 0.850026 | 2.215806e-60 | 4.282392e-57 |
| MsG0180003793.01 | MsG0880042795.01 | 0.859284 | 4.600214e-63 | 1.208475e-59 |
| MsG0180003822.01 | MsG0880042795.01 | 0.800249 | 1.574765e-48 | 7.297446e-46 |
| MsG0180003922.01 | MsG0880042795.01 | 0.832881 | 7.339796e-56 | 8.312778e-53 |
| MsG0180003932.01 | MsG0880042795.01 | 0.821855 | 3.234613e-53 | 2.662808e-50 |
| MsG0180004009.01 | MsG0880042795.01 | 0.823294 | 1.496659e-53 | 1.283420e-50 |
| MsG0180004128.01 | MsG0880042795.01 | 0.812478 | 4.154742e-51 | 2.644569e-48 |
| MsG0180004130.01 | MsG0880042795.01 | 0.823282 | 1.506558e-53 | 1.291464e-50 |
| MsG0180004160.01 | MsG0880042795.01 | 0.825499 | 4.533910e-54 | 4.139668e-51 |
| MsG0180004293.01 | MsG0880042795.01 | -0.805897 | 1.069133e-49 | 5.723493e-47 |
| MsG0180004398.01 | MsG0880042795.01 | 0.848864 | 4.671101e-60 | 8.691854e-57 |
| MsG0180004605.01 | MsG0880042795.01 | -0.839302 | 1.718825e-57 | 2.363724e-54 |
| MsG0180004854.01 | MsG0880042795.01 | 0.840032 | 1.110050e-57 | 1.561653e-54 |
| MsG0180004861.01 | MsG0880042795.01 | 0.844167 | 8.939515e-59 | 1.431027e-55 |
| MsG0180005049.01 | MsG0880042795.01 | 0.803247 | 3.818462e-49 | 1.909461e-46 |
| MsG0180005169.01 | MsG0880042795.01 | 0.842445 | 2.574447e-58 | 3.904761e-55 |
| MsG0180005303.01 | MsG0880042795.01 | -0.805242 | 1.467352e-49 | 7.723909e-47 |
| MsG0180005334.01 | MsG0880042795.01 | 0.830831 | 2.352497e-55 | 2.507458e-52 |
| MsG0180005424.01 | MsG0880042795.01 | 0.801808 | 7.559218e-49 | 3.644026e-46 |
| MsG0180005575.01 | MsG0880042795.01 | 0.807513 | 4.873015e-50 | 2.719548e-47 |
| MsG0280006376.01 | MsG0880042795.01 | 0.814537 | 1.464496e-51 | 9.853230e-49 |
| MsG0780040418.01 | MsG0880042795.01 | 0.805010 | 1.640573e-49 | 8.584571e-47 |
| MsG0780040569.01 | MsG0880042795.01 | 0.851615 | 7.910251e-61 | 1.610124e-57 |
| MsG0780040926.01 | MsG0880042795.01 | 0.804032 | 2.624264e-49 | 1.339068e-46 |
| MsG0780041016.01 | MsG0880042795.01 | 0.827910 | 1.204703e-54 | 1.179139e-51 |
| MsG0780041137.01 | MsG0880042795.01 | 0.800406 | 1.462797e-48 | 6.805819e-46 |
| MsG0780041223.01 | MsG0880042795.01 | 0.868786 | 5.040025e-66 | 1.846391e-62 |
| MsG0780041258.01 | MsG0880042795.01 | 0.807994 | 3.851487e-50 | 2.176542e-47 |
| MsG0780041268.01 | MsG0880042795.01 | 0.835210 | 1.916369e-56 | 2.327589e-53 |
| MsG0780041300.01 | MsG0880042795.01 | 0.805373 | 1.377702e-49 | 7.276511e-47 |
| MsG0780041390.01 | MsG0880042795.01 | 0.801919 | 7.174640e-49 | 3.468277e-46 |
| MsG0780041435.01 | MsG0880042795.01 | 0.818531 | 1.867076e-52 | 1.401206e-49 |
| MsG0780041440.01 | MsG0880042795.01 | 0.805386 | 1.368882e-49 | 7.232261e-47 |
| MsG0880042033.01 | MsG0880042795.01 | 0.851770 | 7.147394e-61 | 1.462073e-57 |
| MsG0880042128.01 | MsG0880042795.01 | 0.858837 | 6.262450e-63 | 1.620102e-59 |
| MsG0880042129.01 | MsG0880042795.01 | 0.850472 | 1.661206e-60 | 3.257539e-57 |
| MsG0880042399.01 | MsG0880042795.01 | -0.802873 | 4.562862e-49 | 2.260041e-46 |
| MsG0880042519.01 | MsG0880042795.01 | 0.803373 | 3.596004e-49 | 1.803994e-46 |
| MsG0880042760.01 | MsG0880042795.01 | 0.814354 | 1.607814e-51 | 1.076380e-48 |
| MsG0880042795.01 | MsG0880042978.01 | 0.861454 | 1.014544e-63 | 2.872531e-60 |
| MsG0880042795.01 | MsG0880042991.01 | 0.865309 | 6.484340e-65 | 2.099828e-61 |
| MsG0880042795.01 | MsG0880043027.01 | -0.806356 | 8.560136e-50 | 4.636372e-47 |
| MsG0880042795.01 | MsG0880043748.01 | 0.808708 | 2.712380e-50 | 1.561757e-47 |
| MsG0880042795.01 | MsG0880045010.01 | -0.804849 | 1.773419e-49 | 9.241853e-47 |
| MsG0880042795.01 | MsG0880045294.01 | 0.805499 | 1.295850e-49 | 6.866453e-47 |
| MsG0880042795.01 | MsG0880045460.01 | 0.813862 | 2.065119e-51 | 1.364179e-48 |
| MsG0880042795.01 | MsG0880045656.01 | 0.824083 | 9.780106e-54 | 8.575581e-51 |
| MsG0880042795.01 | MsG0880045684.01 | 0.828086 | 1.092858e-54 | 1.075216e-51 |
| MsG0880042795.01 | MsG0880046074.01 | 0.818709 | 1.701621e-52 | 1.283252e-49 |
| MsG0880042795.01 | MsG0880046177.01 | 0.801949 | 7.072019e-49 | 3.421294e-46 |
| MsG0880042795.01 | MsG0880046289.01 | -0.816057 | 6.728580e-52 | 4.718524e-49 |
| MsG0880042795.01 | MsG0880047212.01 | 0.833402 | 5.445149e-56 | 6.264066e-53 |
| MsG0880042795.01 | MsG0880047428.01 | 0.804972 | 1.670937e-49 | 8.735288e-47 |
| MsG0880042795.01 | MsG0880047743.01 | 0.828084 | 1.094397e-54 | 1.076643e-51 |
| MsG0280010776.01 | MsG0880042795.01 | 0.845709 | 3.428708e-59 | 5.764820e-56 |
| MsG0280011304.01 | MsG0880042795.01 | 0.816799 | 4.590388e-52 | 3.284846e-49 |
| MsG0280011339.01 | MsG0880042795.01 | 0.808540 | 2.946149e-50 | 1.689008e-47 |
| MsG0280011388.01 | MsG0880042795.01 | 0.819240 | 1.288217e-52 | 9.859000e-50 |
| MsG0380011581.01 | MsG0880042795.01 | 0.807852 | 4.128426e-50 | 2.324294e-47 |
| MsG0380011614.01 | MsG0880042795.01 | 0.835477 | 1.640015e-56 | 2.007858e-53 |
| MsG0380011747.01 | MsG0880042795.01 | 0.851975 | 6.252489e-61 | 1.287059e-57 |
| MsG0380012073.01 | MsG0880042795.01 | 0.811862 | 5.661417e-51 | 3.543921e-48 |
| MsG0380012122.01 | MsG0880042795.01 | 0.801800 | 7.587925e-49 | 3.657067e-46 |
| MsG0380012570.01 | MsG0880042795.01 | 0.831077 | 2.047688e-55 | 2.198469e-52 |
| MsG0380013085.01 | MsG0880042795.01 | 0.858113 | 1.029406e-62 | 2.598773e-59 |
| MsG0380014175.01 | MsG0880042795.01 | 0.829427 | 5.179734e-55 | 5.299682e-52 |
| MsG0380014778.01 | MsG0880042795.01 | 0.828848 | 7.156556e-55 | 7.197843e-52 |
| MsG0680031628.01 | MsG0880042795.01 | 0.805697 | 1.178161e-49 | 6.275062e-47 |
| MsG0680031967.01 | MsG0880042795.01 | 0.831666 | 1.466807e-55 | 1.602574e-52 |
| MsG0680034232.01 | MsG0880042795.01 | 0.800041 | 1.736084e-48 | 8.002438e-46 |
| MsG0680034497.01 | MsG0880042795.01 | 0.802305 | 5.975793e-49 | 2.917506e-46 |
| MsG0680035306.01 | MsG0880042795.01 | 0.820832 | 5.569854e-53 | 4.455759e-50 |
| MsG0680035577.01 | MsG0880042795.01 | 0.801855 | 7.395400e-49 | 3.569325e-46 |
| MsG0480018477.01 | MsG0880042795.01 | 0.822104 | 2.832196e-53 | 2.347917e-50 |
| MsG0480018894.01 | MsG0880042795.01 | 0.804272 | 2.338675e-49 | 1.200677e-46 |
| MsG0480018911.01 | MsG0880042795.01 | 0.808515 | 2.981584e-50 | 1.708257e-47 |
| MsG0480019380.01 | MsG0880042795.01 | 0.845404 | 4.148672e-59 | 6.906098e-56 |
| MsG0480019984.01 | MsG0880042795.01 | -0.802335 | 5.891115e-49 | 2.878271e-46 |
| MsG0480021037.01 | MsG0880042795.01 | 0.860165 | 2.498442e-63 | 6.766702e-60 |
| MsG0480021077.01 | MsG0880042795.01 | -0.865063 | 7.746735e-65 | 2.487551e-61 |
| MsG0480021706.01 | MsG0880042795.01 | 0.807688 | 4.474102e-50 | 2.508199e-47 |
| MsG0480021768.01 | MsG0880042795.01 | 0.840101 | 1.065217e-57 | 1.501698e-54 |
| MsG0480022672.01 | MsG0880042795.01 | 0.802955 | 4.387292e-49 | 2.177587e-46 |
| MsG0480022780.01 | MsG0880042795.01 | 0.847061 | 1.467683e-59 | 2.577387e-56 |
| MsG0480022877.01 | MsG0880042795.01 | 0.807963 | 3.909939e-50 | 2.207766e-47 |
| MsG0480022960.01 | MsG0880042795.01 | 0.822155 | 2.755548e-53 | 2.287762e-50 |
| MsG0480023061.01 | MsG0880042795.01 | 0.804807 | 1.809501e-49 | 9.419607e-47 |
| MsG0480023221.01 | MsG0880042795.01 | 0.878978 | 1.812079e-69 | 9.655156e-66 |
| MsG0480023377.01 | MsG0880042795.01 | 0.803384 | 3.576468e-49 | 1.794732e-46 |
| MsG0480023387.01 | MsG0880042795.01 | 0.838166 | 3.379370e-57 | 4.488533e-54 |
| MsG0480023400.01 | MsG0880042795.01 | -0.816964 | 4.214605e-52 | 3.029971e-49 |
| MsG0480023559.01 | MsG0880042795.01 | 0.811815 | 5.798079e-51 | 3.624923e-48 |
| MsG0580024084.01 | MsG0880042795.01 | 0.835748 | 1.400526e-56 | 1.728682e-53 |
| MsG0580024191.01 | MsG0880042795.01 | 0.813852 | 2.074844e-51 | 1.370237e-48 |
| MsG0580025268.01 | MsG0880042795.01 | 0.845760 | 3.321744e-59 | 5.594219e-56 |
| MsG0580025816.01 | MsG0880042795.01 | 0.827439 | 1.563259e-54 | 1.509330e-51 |
| MsG0380015027.01 | MsG0880042795.01 | 0.810938 | 8.987529e-51 | 5.490814e-48 |
| MsG0380015118.01 | MsG0880042795.01 | 0.835479 | 1.638199e-56 | 2.005743e-53 |
| MsG0380015435.01 | MsG0880042795.01 | 0.853328 | 2.570515e-61 | 5.533920e-58 |
| MsG0380015598.01 | MsG0880042795.01 | -0.831706 | 1.434096e-55 | 1.568814e-52 |
| MsG0380016126.01 | MsG0880042795.01 | 0.811364 | 7.264070e-51 | 4.487602e-48 |
| MsG0380016290.01 | MsG0880042795.01 | 0.856499 | 3.087122e-62 | 7.384418e-59 |
| MsG0380016505.01 | MsG0880042795.01 | 0.848109 | 7.557843e-60 | 1.372091e-56 |
| MsG0380016604.01 | MsG0880042795.01 | 0.809841 | 1.550236e-50 | 9.199763e-48 |
| MsG0380016671.01 | MsG0880042795.01 | 0.843811 | 1.113587e-58 | 1.762763e-55 |
| MsG0380017431.01 | MsG0880042795.01 | 0.810562 | 1.083668e-50 | 6.553795e-48 |
| MsG0380017433.01 | MsG0880042795.01 | 0.824843 | 6.479162e-54 | 5.806585e-51 |
| MsG0380017498.01 | MsG0880042795.01 | 0.814404 | 1.567509e-51 | 1.050878e-48 |
| MsG0380017947.01 | MsG0880042795.01 | 0.815659 | 8.256416e-52 | 5.727132e-49 |
| MsG0380018033.01 | MsG0880042795.01 | 0.833896 | 4.098330e-56 | 4.785378e-53 |
| MsG0480018278.01 | MsG0880042795.01 | 0.843559 | 1.300734e-58 | 2.042931e-55 |
| MsG0480018292.01 | MsG0880042795.01 | 0.814306 | 1.647990e-51 | 1.101878e-48 |
| MsG0580026864.01 | MsG0880042795.01 | 0.800515 | 1.390050e-48 | 6.485149e-46 |
| MsG0580027361.01 | MsG0880042795.01 | 0.804468 | 2.129395e-49 | 1.098740e-46 |
| MsG0580028044.01 | MsG0880042795.01 | 0.814133 | 1.799093e-51 | 1.197234e-48 |
| MsG0580028094.01 | MsG0880042795.01 | 0.820004 | 8.625892e-53 | 6.743707e-50 |
| MsG0580028148.01 | MsG0880042795.01 | 0.815317 | 9.837705e-52 | 6.759997e-49 |
| MsG0580028582.01 | MsG0880042795.01 | 0.827189 | 1.794749e-54 | 1.720208e-51 |
| MsG0580028597.01 | MsG0880042795.01 | 0.859434 | 4.147294e-63 | 1.095177e-59 |
| MsG0580028630.01 | MsG0880042795.01 | 0.804305 | 2.302885e-49 | 1.183309e-46 |
| MsG0580028897.01 | MsG0880042795.01 | 0.800803 | 1.214429e-48 | 5.707106e-46 |
| MsG0580029127.01 | MsG0880042795.01 | 0.800709 | 1.268774e-48 | 5.948288e-46 |
| MsG0580029370.01 | MsG0880042795.01 | 0.808487 | 3.023436e-50 | 1.730955e-47 |
| MsG0580029549.01 | MsG0880042795.01 | 0.809476 | 1.856922e-50 | 1.091340e-47 |
| MsG0580029550.01 | MsG0880042795.01 | 0.815971 | 7.032823e-52 | 4.920120e-49 |
| MsG0580029588.01 | MsG0880042795.01 | 0.815832 | 7.551694e-52 | 5.262858e-49 |
| MsG0580029801.01 | MsG0880042795.01 | 0.835612 | 1.516080e-56 | 1.863606e-53 |
| MsG0580029919.01 | MsG0880042795.01 | 0.814606 | 1.414243e-51 | 9.532623e-49 |
| MsG0580030010.01 | MsG0880042795.01 | 0.808549 | 2.932440e-50 | 1.681601e-47 |
| MsG0680030350.01 | MsG0880042795.01 | 0.834029 | 3.795673e-56 | 4.449423e-53 |
| MsG0280006545.01 | MsG0880042795.01 | 0.836857 | 7.315906e-57 | 9.336589e-54 |
| MsG0280006852.01 | MsG0880042795.01 | 0.819537 | 1.102328e-52 | 8.506657e-50 |
| MsG0280006993.01 | MsG0880042795.01 | 0.862376 | 5.293482e-64 | 1.546950e-60 |
| MsG0280007226.01 | MsG0880042795.01 | 0.806220 | 9.142934e-50 | 4.935251e-47 |
| MsG0280007440.01 | MsG0880042795.01 | 0.824870 | 6.384005e-54 | 5.725902e-51 |
| MsG0280007501.01 | MsG0880042795.01 | 0.802921 | 4.459115e-49 | 2.211348e-46 |
| MsG0280007527.01 | MsG0880042795.01 | 0.802174 | 6.357354e-49 | 3.093261e-46 |
| MsG0280007787.01 | MsG0880042795.01 | 0.808857 | 2.519650e-50 | 1.456560e-47 |
| MsG0280007847.01 | MsG0880042795.01 | 0.838728 | 2.420913e-57 | 3.271448e-54 |
| MsG0280007903.01 | MsG0880042795.01 | 0.857532 | 1.531092e-62 | 3.790996e-59 |
| MsG0280008004.01 | MsG0880042795.01 | 0.810818 | 9.538027e-51 | 5.808202e-48 |
| MsG0280008118.01 | MsG0880042795.01 | 0.837544 | 4.881976e-57 | 6.362303e-54 |
| MsG0280008429.01 | MsG0880042795.01 | 0.806150 | 9.460491e-50 | 5.097368e-47 |
| MsG0280009141.01 | MsG0880042795.01 | 0.828847 | 7.161256e-55 | 7.202304e-52 |
| MsG0280009575.01 | MsG0880042795.01 | 0.825925 | 3.592143e-54 | 3.320111e-51 |
| MsG0280010082.01 | MsG0880042795.01 | 0.833518 | 5.092783e-56 | 5.879360e-53 |
| MsG0280010532.01 | MsG0880042795.01 | -0.812613 | 3.882741e-51 | 2.480104e-48 |
| MsG0280010547.01 | MsG0880042795.01 | 0.811109 | 8.250345e-51 | 5.063004e-48 |
| MsG0680035877.01 | MsG0880042795.01 | 0.809729 | 1.638369e-50 | 9.694554e-48 |
| MsG0680035888.01 | MsG0880042795.01 | 0.834399 | 3.065902e-56 | 3.634127e-53 |
| MsG0780035937.01 | MsG0880042795.01 | 0.812290 | 4.567724e-51 | 2.892776e-48 |
| MsG0780036186.01 | MsG0880042795.01 | 0.877029 | 8.715185e-69 | 4.317345e-65 |
| MsG0780036240.01 | MsG0880042795.01 | 0.830772 | 2.433027e-55 | 2.588695e-52 |
| MsG0780037093.01 | MsG0880042795.01 | 0.871499 | 6.521995e-67 | 2.636910e-63 |
| MsG0780038400.01 | MsG0880042795.01 | 0.854742 | 1.004884e-61 | 2.266875e-58 |
| MsG0780038892.01 | MsG0880042795.01 | 0.854286 | 1.361771e-61 | 3.026341e-58 |
| MsG0780039643.01 | MsG0880042795.01 | 0.815092 | 1.103544e-51 | 7.536267e-49 |
| MsG0780039828.01 | MsG0880042795.01 | 0.817847 | 2.666261e-52 | 1.963659e-49 |
| MsG0780040070.01 | MsG0880042795.01 | 0.815297 | 9.937243e-52 | 6.824663e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042795.01.T01 | MTR_8g022330 | 63.248 | 117 | 15 | 2 | 6 | 95 | 56 | 171 | 6.70e-42 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042795.01.T01 | AT1G17350 | 49.153 | 118 | 31 | 3 | 6 | 95 | 56 | 172 | 7.29e-30 | 106 |
| MsG0880042795.01.T01 | AT1G17350 | 49.153 | 118 | 31 | 3 | 6 | 95 | 56 | 172 | 7.29e-30 | 106 |
| MsG0880042795.01.T01 | AT1G17350 | 49.153 | 118 | 31 | 3 | 6 | 95 | 56 | 172 | 7.29e-30 | 106 |
| MsG0880042795.01.T01 | AT1G17350 | 49.153 | 118 | 31 | 3 | 6 | 95 | 56 | 172 | 7.29e-30 | 106 |
| MsG0880042795.01.T01 | AT1G17350 | 50.442 | 113 | 28 | 2 | 6 | 90 | 56 | 168 | 1.01e-29 | 106 |
| MsG0880042795.01.T01 | AT1G72420 | 47.863 | 117 | 32 | 3 | 6 | 94 | 56 | 171 | 6.62e-26 | 96.3 |
| MsG0880042795.01.T01 | AT1G72420 | 47.863 | 117 | 32 | 3 | 6 | 94 | 56 | 171 | 6.62e-26 | 96.3 |
| MsG0880042795.01.T01 | AT1G72420 | 47.863 | 117 | 32 | 3 | 6 | 94 | 45 | 160 | 6.91e-26 | 95.9 |
| MsG0880042795.01.T01 | AT1G72420 | 60.784 | 51 | 19 | 1 | 6 | 55 | 56 | 106 | 8.56e-14 | 63.2 |
| MsG0880042795.01.T01 | AT1G72420 | 60.784 | 51 | 19 | 1 | 6 | 55 | 56 | 106 | 8.56e-14 | 63.2 |
| MsG0880042795.01.T01 | AT1G72420 | 60.784 | 51 | 19 | 1 | 6 | 55 | 56 | 106 | 1.24e-13 | 63.5 |
Find 25 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATATACCAGTTATCTT+TGG | 0.216625 | 8:+14143256 | None:intergenic |
| TTCAAATTGTTATGTTGTTC+AGG | 0.236156 | 8:-14144436 | None:intergenic |
| CAGATACCTGAATCTGAAAA+TGG | 0.295053 | 8:-14144394 | MsG0880042795.01.T01:CDS |
| TGCAGATATACACGGAGAAT+TGG | 0.328795 | 8:-14143333 | MsG0880042795.01.T01:intron |
| GCAATATACCAGTTATCTTT+GGG | 0.348274 | 8:+14143257 | None:intergenic |
| TTGTGGAATGCGCTCCAAAA+AGG | 0.350095 | 8:-14144290 | MsG0880042795.01.T01:intron |
| GTTACGTGCCCAAAGATAAC+TGG | 0.367548 | 8:-14143265 | MsG0880042795.01.T01:CDS |
| CATATCAATCATTACTAATC+AGG | 0.379218 | 8:+14143199 | None:intergenic |
| TGTAAGCAGTAAGATGGAAA+TGG | 0.427922 | 8:+14143223 | None:intergenic |
| TCTGAAAATGGTAAAACTAC+TGG | 0.430983 | 8:-14144382 | MsG0880042795.01.T01:CDS |
| CTCTGGGAATCTTTCACTTG+AGG | 0.435126 | 8:-14144353 | MsG0880042795.01.T01:CDS |
| GCAGATATACACGGAGAATT+GGG | 0.459883 | 8:-14143332 | MsG0880042795.01.T01:intron |
| TCAGGTTGTAAGCAGTAAGA+TGG | 0.513936 | 8:+14143217 | None:intergenic |
| GTAAGCAGTAAGATGGAAAT+GGG | 0.514535 | 8:+14143224 | None:intergenic |
| GAGTTGTCCTCCATCTGTCC+AGG | 0.525035 | 8:+14143301 | None:intergenic |
| CTTTCACTTGAGGTTACTCA+AGG | 0.540859 | 8:-14144343 | MsG0880042795.01.T01:CDS |
| GGTTAACTCACCTGGACAGA+TGG | 0.543070 | 8:-14143311 | MsG0880042795.01.T01:CDS |
| AAGTGGAATATTAGTAGAGG+TGG | 0.553563 | 8:-14144316 | MsG0880042795.01.T01:CDS |
| GCTAAGTGGAATATTAGTAG+AGG | 0.567692 | 8:-14144319 | MsG0880042795.01.T01:CDS |
| GACAGATGGAGGACAACTCA+TGG | 0.575304 | 8:-14143297 | MsG0880042795.01.T01:CDS |
| GAGAATTGGGTTAACTCACC+TGG | 0.591802 | 8:-14143319 | MsG0880042795.01.T01:CDS |
| AGGTTACTCAAGGTGCTAAG+TGG | 0.593770 | 8:-14144333 | MsG0880042795.01.T01:CDS |
| AGATAACTGGTATATTGCAA+AGG | 0.608700 | 8:-14143252 | MsG0880042795.01.T01:CDS |
| TAACTCACCTGGACAGATGG+AGG | 0.644910 | 8:-14143308 | MsG0880042795.01.T01:CDS |
| GATTATGGTGCAGATATACA+CGG | 0.690928 | 8:-14143341 | MsG0880042795.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTGATATAGAAAT+AGG | + | Chr8:14143476-14143495 | None:intergenic | 10.0% |
| !! | TTTAAATAATCAATTCAAAC+AGG | - | Chr8:14143635-14143654 | MsG0880042795.01.T01:intron | 15.0% |
| !! | ATTGAATTGAATTGTATGAT+TGG | - | Chr8:14144033-14144052 | MsG0880042795.01.T01:intron | 20.0% |
| !!! | CATTTGGCATTTTAAAAAAA+AGG | + | Chr8:14144214-14144233 | None:intergenic | 20.0% |
| ! | AAATTTCCTAGGATATCATT+TGG | + | Chr8:14144230-14144249 | None:intergenic | 25.0% |
| ! | AATTCAATTCAATATGCACT+AGG | + | Chr8:14144026-14144045 | None:intergenic | 25.0% |
| ! | AGCTAATAAGTCAATTCAAA+CGG | - | Chr8:14143973-14143992 | MsG0880042795.01.T01:intron | 25.0% |
| ! | CAAGATAACTTATAGCTTAT+AGG | + | Chr8:14143517-14143536 | None:intergenic | 25.0% |
| ! | TATGCATTGAATTGTATGAA+TGG | - | Chr8:14143698-14143717 | MsG0880042795.01.T01:intron | 25.0% |
| ! | TATTGTAACTAGTTGGATTA+TGG | - | Chr8:14144287-14144306 | MsG0880042795.01.T01:intron | 25.0% |
| ! | TTTAAAAAAAAGGACACTCA+CGG | + | Chr8:14144204-14144223 | None:intergenic | 25.0% |
| !! | ATTAGCTTATCTAATGGATA+AGG | + | Chr8:14143960-14143979 | None:intergenic | 25.0% |
| !! | TGACTTATTAGCTTATCTAA+TGG | + | Chr8:14143966-14143985 | None:intergenic | 25.0% |
| AAAATGCCAAATGATATCCT+AGG | - | Chr8:14144221-14144240 | MsG0880042795.01.T01:intron | 30.0% | |
| AAGTTATCTTGTAGAGCTTA+TGG | - | Chr8:14143526-14143545 | MsG0880042795.01.T01:intron | 30.0% | |
| ACGATAGCTATGAAACTTAA+AGG | - | Chr8:14144155-14144174 | MsG0880042795.01.T01:intron | 30.0% | |
| AGATAACTGGTATATTGCAA+AGG | - | Chr8:14144391-14144410 | MsG0880042795.01.T01:CDS | 30.0% | |
| GATATCCTAGGAAATTTAGA+GGG | - | Chr8:14144233-14144252 | MsG0880042795.01.T01:intron | 30.0% | |
| GCAATATACCAGTTATCTTT+GGG | + | Chr8:14144389-14144408 | None:intergenic | 30.0% | |
| TCTGAAAATGGTAAAACTAC+TGG | - | Chr8:14143261-14143280 | MsG0880042795.01.T01:CDS | 30.0% | |
| TGATATCCTAGGAAATTTAG+AGG | - | Chr8:14144232-14144251 | MsG0880042795.01.T01:intron | 30.0% | |
| TGCAATATACCAGTTATCTT+TGG | + | Chr8:14144390-14144409 | None:intergenic | 30.0% | |
| TTGAGTGATTATAGTGTAAG+CGG | - | Chr8:14143770-14143789 | MsG0880042795.01.T01:intron | 30.0% | |
| ! | AAAACTACTGGAATTTTCTC+TGG | - | Chr8:14143273-14143292 | MsG0880042795.01.T01:CDS | 30.0% |
| ! | AAACTACTGGAATTTTCTCT+GGG | - | Chr8:14143274-14143293 | MsG0880042795.01.T01:CDS | 30.0% |
| ! | AGTTAAAAAAGCCACCTTTT+TGG | + | Chr8:14143370-14143389 | None:intergenic | 30.0% |
| ! | GTTTTACCATTTTCAGATTC+AGG | + | Chr8:14143258-14143277 | None:intergenic | 30.0% |
| ! | TTGCAAGTATTGTAACTAGT+TGG | - | Chr8:14144280-14144299 | MsG0880042795.01.T01:intron | 30.0% |
| !! | TCTGTGTTTTTGTAGTTTGA+TGG | - | Chr8:14144109-14144128 | MsG0880042795.01.T01:intron | 30.0% |
| !! | TTCTCATTTTTGTTCAACGA+CGG | - | Chr8:14144063-14144082 | MsG0880042795.01.T01:intron | 30.0% |
| AAGTGGAATATTAGTAGAGG+TGG | - | Chr8:14143327-14143346 | MsG0880042795.01.T01:CDS | 35.0% | |
| AAGTTCGACAACAACATAGA+TGG | - | Chr8:14143667-14143686 | MsG0880042795.01.T01:intron | 35.0% | |
| AGGGTTGAAGTTTCATTTCA+TGG | - | Chr8:14144252-14144271 | MsG0880042795.01.T01:intron | 35.0% | |
| CAAAAACACAGAATTGCGTA+AGG | + | Chr8:14144101-14144120 | None:intergenic | 35.0% | |
| CAGATACCTGAATCTGAAAA+TGG | - | Chr8:14143249-14143268 | MsG0880042795.01.T01:CDS | 35.0% | |
| CTCAAAGACTTTAGTGTTGT+TGG | - | Chr8:14143388-14143407 | MsG0880042795.01.T01:intron | 35.0% | |
| GATTATGGTGCAGATATACA+CGG | - | Chr8:14144302-14144321 | MsG0880042795.01.T01:CDS | 35.0% | |
| GCTAAGTGGAATATTAGTAG+AGG | - | Chr8:14143324-14143343 | MsG0880042795.01.T01:CDS | 35.0% | |
| GCTATGAAACTTAAAGGAGA+TGG | - | Chr8:14144161-14144180 | MsG0880042795.01.T01:intron | 35.0% | |
| GTAAGCAGTAAGATGGAAAT+GGG | + | Chr8:14144422-14144441 | None:intergenic | 35.0% | |
| TGTAAGCAGTAAGATGGAAA+TGG | + | Chr8:14144423-14144442 | None:intergenic | 35.0% | |
| TTCAACCCTCTAAATTTCCT+AGG | + | Chr8:14144241-14144260 | None:intergenic | 35.0% | |
| TTGTTGTCGAACTTGAACAA+AGG | + | Chr8:14143661-14143680 | None:intergenic | 35.0% | |
| ! | CTCAATGATTTTGCAGTGTT+TGG | - | Chr8:14143736-14143755 | MsG0880042795.01.T01:intron | 35.0% |
| ! | CTCACAAGTTTTTATGCTAG+TGG | - | Chr8:14143607-14143626 | MsG0880042795.01.T01:intron | 35.0% |
| !! | ATTAGTAGAGGTGGATTTTG+TGG | - | Chr8:14143336-14143355 | MsG0880042795.01.T01:intron | 35.0% |
| AAGGAGATGTGAGACTCTAT+GGG | + | Chr8:14143941-14143960 | None:intergenic | 40.0% | |
| CTTTCACTTGAGGTTACTCA+AGG | - | Chr8:14143300-14143319 | MsG0880042795.01.T01:CDS | 40.0% | |
| GCAGATATACACGGAGAATT+GGG | - | Chr8:14144311-14144330 | MsG0880042795.01.T01:CDS | 40.0% | |
| TAAGGAGATGTGAGACTCTA+TGG | + | Chr8:14143942-14143961 | None:intergenic | 40.0% | |
| TGCAGATATACACGGAGAAT+TGG | - | Chr8:14144310-14144329 | MsG0880042795.01.T01:CDS | 40.0% | |
| ! | GTTTGATGGCTTCATTGACT+TGG | - | Chr8:14144123-14144142 | MsG0880042795.01.T01:intron | 40.0% |
| ! | TCAGGTTGTAAGCAGTAAGA+TGG | + | Chr8:14144429-14144448 | None:intergenic | 40.0% |
| AGGAGATGTGAGACTCTATG+GGG | + | Chr8:14143940-14143959 | None:intergenic | 45.0% | |
| GAGAATTGGGTTAACTCACC+TGG | - | Chr8:14144324-14144343 | MsG0880042795.01.T01:CDS | 45.0% | |
| GTTACGTGCCCAAAGATAAC+TGG | - | Chr8:14144378-14144397 | MsG0880042795.01.T01:CDS | 45.0% | |
| TTGTGGAATGCGCTCCAAAA+AGG | - | Chr8:14143353-14143372 | MsG0880042795.01.T01:intron | 45.0% | |
| ! | AGGTTACTCAAGGTGCTAAG+TGG | - | Chr8:14143310-14143329 | MsG0880042795.01.T01:CDS | 45.0% |
| ! | CTCTGGGAATCTTTCACTTG+AGG | - | Chr8:14143290-14143309 | MsG0880042795.01.T01:CDS | 45.0% |
| GACAGATGGAGGACAACTCA+TGG | - | Chr8:14144346-14144365 | MsG0880042795.01.T01:CDS | 50.0% | |
| GGAGATGTGAGACTCTATGG+GGG | + | Chr8:14143939-14143958 | None:intergenic | 50.0% | |
| GGTTAACTCACCTGGACAGA+TGG | - | Chr8:14144332-14144351 | MsG0880042795.01.T01:CDS | 50.0% | |
| TAACTCACCTGGACAGATGG+AGG | - | Chr8:14144335-14144354 | MsG0880042795.01.T01:CDS | 50.0% | |
| TGGAATGCGCTCCAAAAAGG+TGG | - | Chr8:14143356-14143375 | MsG0880042795.01.T01:intron | 50.0% | |
| GAGTTGTCCTCCATCTGTCC+AGG | + | Chr8:14144345-14144364 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 14143213 | 14144452 | 14143213 | ID=MsG0880042795.01;Name=MsG0880042795.01 |
| Chr8 | mRNA | 14143213 | 14144452 | 14143213 | ID=MsG0880042795.01.T01;Parent=MsG0880042795.01;Name=MsG0880042795.01.T01;_AED=0.52;_eAED=0.52;_QI=0|0|0|1|1|1|2|0|99 |
| Chr8 | exon | 14144291 | 14144452 | 14144291 | ID=MsG0880042795.01.T01:exon:3828;Parent=MsG0880042795.01.T01 |
| Chr8 | exon | 14143213 | 14143350 | 14143213 | ID=MsG0880042795.01.T01:exon:3827;Parent=MsG0880042795.01.T01 |
| Chr8 | CDS | 14144291 | 14144452 | 14144291 | ID=MsG0880042795.01.T01:cds;Parent=MsG0880042795.01.T01 |
| Chr8 | CDS | 14143213 | 14143350 | 14143213 | ID=MsG0880042795.01.T01:cds;Parent=MsG0880042795.01.T01 |
| Gene Sequence |
| Protein sequence |
