Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018292.01.T01 | XP_003604300.2 | 80.453 | 353 | 42 | 3 | 1 | 328 | 1 | 351 | 0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018292.01.T01 | Q9T072 | 43.169 | 183 | 102 | 2 | 143 | 325 | 144 | 324 | 2.77E-39 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018292.01.T01 | G7JFN8 | 80.453 | 353 | 42 | 3 | 1 | 328 | 1 | 351 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047790.01 | MsG0480018292.01 | -0.839969 | 1.152504e-57 | 1.618112e-54 |
| MsG0080048383.01 | MsG0480018292.01 | 0.822380 | 2.443428e-53 | 2.041920e-50 |
| MsG0080048968.01 | MsG0480018292.01 | 0.839950 | 1.165881e-57 | 1.635882e-54 |
| MsG0180000023.01 | MsG0480018292.01 | 0.822529 | 2.256690e-53 | 1.893824e-50 |
| MsG0180000055.01 | MsG0480018292.01 | 0.828252 | 9.970389e-55 | 9.856295e-52 |
| MsG0180000400.01 | MsG0480018292.01 | -0.839368 | 1.652047e-57 | 2.276635e-54 |
| MsG0180000611.01 | MsG0480018292.01 | 0.871207 | 8.149361e-67 | 3.259838e-63 |
| MsG0180001020.01 | MsG0480018292.01 | 0.803250 | 3.812986e-49 | 1.906853e-46 |
| MsG0180001235.01 | MsG0480018292.01 | 0.824746 | 6.829665e-54 | 6.104047e-51 |
| MsG0180001311.01 | MsG0480018292.01 | 0.824999 | 5.952619e-54 | 5.358662e-51 |
| MsG0180002992.01 | MsG0480018292.01 | 0.820326 | 7.277724e-53 | 5.740258e-50 |
| MsG0180003379.01 | MsG0480018292.01 | 0.845139 | 4.893757e-59 | 8.076770e-56 |
| MsG0180003567.01 | MsG0480018292.01 | 0.805419 | 1.347369e-49 | 7.124724e-47 |
| MsG0180003807.01 | MsG0480018292.01 | 0.810684 | 1.019824e-50 | 6.187977e-48 |
| MsG0180003922.01 | MsG0480018292.01 | 0.813046 | 3.120529e-51 | 2.016185e-48 |
| MsG0180003932.01 | MsG0480018292.01 | 0.801357 | 9.353043e-49 | 4.457676e-46 |
| MsG0180004016.01 | MsG0480018292.01 | 0.831219 | 1.889794e-55 | 2.037371e-52 |
| MsG0180004128.01 | MsG0480018292.01 | 0.837256 | 5.786942e-57 | 7.474247e-54 |
| MsG0180004160.01 | MsG0480018292.01 | 0.834531 | 2.840406e-56 | 3.380371e-53 |
| MsG0180004272.01 | MsG0480018292.01 | 0.806860 | 6.701677e-50 | 3.677155e-47 |
| MsG0180004486.01 | MsG0480018292.01 | 0.812004 | 5.271726e-51 | 3.312764e-48 |
| MsG0180004767.01 | MsG0480018292.01 | 0.827048 | 1.939758e-54 | 1.851377e-51 |
| MsG0180004843.01 | MsG0480018292.01 | 0.822815 | 1.936220e-53 | 1.638076e-50 |
| MsG0180005049.01 | MsG0480018292.01 | 0.823955 | 1.048318e-53 | 9.159566e-51 |
| MsG0180005106.01 | MsG0480018292.01 | 0.821062 | 4.928725e-53 | 3.968508e-50 |
| MsG0180005268.01 | MsG0480018292.01 | 0.842197 | 2.995348e-58 | 4.506888e-55 |
| MsG0180005443.01 | MsG0480018292.01 | 0.805535 | 1.273601e-49 | 6.754748e-47 |
| MsG0180005451.01 | MsG0480018292.01 | 0.813676 | 2.269257e-51 | 1.491531e-48 |
| MsG0180005786.01 | MsG0480018292.01 | 0.805558 | 1.259470e-49 | 6.683648e-47 |
| MsG0180005787.01 | MsG0480018292.01 | 0.814802 | 1.279488e-51 | 8.670037e-49 |
| MsG0180006025.01 | MsG0480018292.01 | 0.876501 | 1.327735e-68 | 6.453126e-65 |
| MsG0180006046.01 | MsG0480018292.01 | 0.815510 | 8.910324e-52 | 6.155623e-49 |
| MsG0180006104.01 | MsG0480018292.01 | 0.842150 | 3.083187e-58 | 4.632379e-55 |
| MsG0280006302.01 | MsG0480018292.01 | -0.813368 | 2.651762e-51 | 1.728482e-48 |
| MsG0280006367.01 | MsG0480018292.01 | 0.802344 | 5.866171e-49 | 2.866741e-46 |
| MsG0280006368.01 | MsG0480018292.01 | 0.816616 | 5.044588e-52 | 3.591946e-49 |
| MsG0280010599.01 | MsG0480018292.01 | 0.801301 | 9.605164e-49 | 4.571354e-46 |
| MsG0280011043.01 | MsG0480018292.01 | 0.809084 | 2.252951e-50 | 1.310363e-47 |
| MsG0280011065.01 | MsG0480018292.01 | 0.811970 | 5.364148e-51 | 3.367633e-48 |
| MsG0280011287.01 | MsG0480018292.01 | 0.826291 | 2.940051e-54 | 2.745724e-51 |
| MsG0280011333.01 | MsG0480018292.01 | 0.800235 | 1.585048e-48 | 7.342445e-46 |
| MsG0380011614.01 | MsG0480018292.01 | 0.810368 | 1.193749e-50 | 7.182294e-48 |
| MsG0380011747.01 | MsG0480018292.01 | 0.801363 | 9.329067e-49 | 4.446885e-46 |
| MsG0380011927.01 | MsG0480018292.01 | 0.801257 | 9.808303e-49 | 4.662758e-46 |
| MsG0380012160.01 | MsG0480018292.01 | 0.804772 | 1.839914e-49 | 9.569076e-47 |
| MsG0380013471.01 | MsG0480018292.01 | 0.800333 | 1.514118e-48 | 7.031535e-46 |
| MsG0380013579.01 | MsG0480018292.01 | 0.831758 | 1.392432e-55 | 1.525610e-52 |
| MsG0380013686.01 | MsG0480018292.01 | 0.823695 | 1.205959e-53 | 1.046135e-50 |
| MsG0380014576.01 | MsG0480018292.01 | 0.812493 | 4.124534e-51 | 2.626312e-48 |
| MsG0380014908.01 | MsG0480018292.01 | 0.811504 | 6.773383e-51 | 4.200248e-48 |
| MsG0380015220.01 | MsG0480018292.01 | 0.851172 | 1.055375e-60 | 2.117640e-57 |
| MsG0380015607.01 | MsG0480018292.01 | 0.802780 | 4.769947e-49 | 2.357085e-46 |
| MsG0380015818.01 | MsG0480018292.01 | 0.816799 | 4.589455e-52 | 3.284209e-49 |
| MsG0380016117.01 | MsG0480018292.01 | 0.827185 | 1.798559e-54 | 1.723656e-51 |
| MsG0380016118.01 | MsG0480018292.01 | -0.825927 | 3.589860e-54 | 3.318122e-51 |
| MsG0380016353.01 | MsG0480018292.01 | 0.821120 | 4.780160e-53 | 3.854813e-50 |
| MsG0380016740.01 | MsG0480018292.01 | 0.812049 | 5.154365e-51 | 3.242815e-48 |
| MsG0380016905.01 | MsG0480018292.01 | 0.824545 | 7.617379e-54 | 6.768312e-51 |
| MsG0380017215.01 | MsG0480018292.01 | 0.807764 | 4.309327e-50 | 2.420666e-47 |
| MsG0380017229.01 | MsG0480018292.01 | 0.847674 | 9.961060e-60 | 1.784016e-56 |
| MsG0380017279.01 | MsG0480018292.01 | 0.814569 | 1.441120e-51 | 9.704240e-49 |
| MsG0380017433.01 | MsG0480018292.01 | 0.822971 | 1.779837e-53 | 1.512470e-50 |
| MsG0380017476.01 | MsG0480018292.01 | 0.846050 | 2.770480e-59 | 4.709234e-56 |
| MsG0380017511.01 | MsG0480018292.01 | 0.830799 | 2.395435e-55 | 2.550781e-52 |
| MsG0380017512.01 | MsG0480018292.01 | 0.813453 | 2.540639e-51 | 1.659909e-48 |
| MsG0380017719.01 | MsG0480018292.01 | 0.801769 | 7.700416e-49 | 3.708226e-46 |
| MsG0480018235.01 | MsG0480018292.01 | 0.827267 | 1.719010e-54 | 1.651398e-51 |
| MsG0480018292.01 | MsG0480019148.01 | 0.828112 | 1.077249e-54 | 1.060686e-51 |
| MsG0480018292.01 | MsG0480019404.01 | 0.825369 | 4.866966e-54 | 4.427340e-51 |
| MsG0480018292.01 | MsG0480019785.01 | 0.803605 | 3.219371e-49 | 1.624813e-46 |
| MsG0480018292.01 | MsG0480019879.01 | 0.818777 | 1.641987e-52 | 1.240673e-49 |
| MsG0480018292.01 | MsG0480019984.01 | -0.827238 | 1.747189e-54 | 1.676993e-51 |
| MsG0480018292.01 | MsG0480020331.01 | 0.813130 | 2.991424e-51 | 1.937068e-48 |
| MsG0480018292.01 | MsG0480021190.01 | 0.804561 | 2.036072e-49 | 1.053124e-46 |
| MsG0480018292.01 | MsG0480021432.01 | 0.832775 | 7.798100e-56 | 8.804334e-53 |
| MsG0480018292.01 | MsG0480021492.01 | 0.813659 | 2.287995e-51 | 1.503165e-48 |
| MsG0480018292.01 | MsG0480021592.01 | 0.801182 | 1.016048e-48 | 4.821029e-46 |
| MsG0480018292.01 | MsG0480021876.01 | -0.824540 | 7.638579e-54 | 6.785952e-51 |
| MsG0480018292.01 | MsG0480022246.01 | 0.855026 | 8.313309e-62 | 1.893123e-58 |
| MsG0480018292.01 | MsG0480022248.01 | 0.848619 | 5.462664e-60 | 1.008303e-56 |
| MsG0480018292.01 | MsG0480022292.01 | 0.803327 | 3.675710e-49 | 1.841791e-46 |
| MsG0480018292.01 | MsG0480023240.01 | 0.809778 | 1.599309e-50 | 9.475607e-48 |
| MsG0480018292.01 | MsG0480023377.01 | 0.824655 | 7.175387e-54 | 6.396354e-51 |
| MsG0480018292.01 | MsG0480023396.01 | 0.824732 | 6.881881e-54 | 6.148104e-51 |
| MsG0480018292.01 | MsG0480023659.01 | 0.804797 | 1.817909e-49 | 9.460865e-47 |
| MsG0480018292.01 | MsG0480023841.01 | -0.848765 | 4.976203e-60 | 9.229567e-57 |
| MsG0480018292.01 | MsG0580024084.01 | 0.836669 | 8.172768e-57 | 1.037031e-53 |
| MsG0480018292.01 | MsG0580024650.01 | -0.816152 | 6.407422e-52 | 4.504956e-49 |
| MsG0480018292.01 | MsG0580025042.01 | 0.819014 | 1.450428e-52 | 1.103228e-49 |
| MsG0480018292.01 | MsG0580025520.01 | 0.805303 | 1.424809e-49 | 7.511761e-47 |
| MsG0480018292.01 | MsG0580025651.01 | 0.805066 | 1.596984e-49 | 8.368728e-47 |
| MsG0480018292.01 | MsG0580025922.01 | 0.814931 | 1.198156e-51 | 8.146744e-49 |
| MsG0480018292.01 | MsG0580025986.01 | 0.826224 | 3.050590e-54 | 2.843484e-51 |
| MsG0480018292.01 | MsG0580028582.01 | 0.802795 | 4.735704e-49 | 2.341069e-46 |
| MsG0480018292.01 | MsG0580028597.01 | 0.814932 | 1.197459e-51 | 8.142306e-49 |
| MsG0480018292.01 | MsG0580028664.01 | -0.800061 | 1.719644e-48 | 7.930932e-46 |
| MsG0480018292.01 | MsG0580029283.01 | 0.831314 | 1.790994e-55 | 1.936350e-52 |
| MsG0480018292.01 | MsG0580029550.01 | 0.811493 | 6.810473e-51 | 4.222008e-48 |
| MsG0480018292.01 | MsG0580029628.01 | 0.824203 | 9.168441e-54 | 8.066695e-51 |
| MsG0480018292.01 | MsG0580029801.01 | 0.837785 | 4.233774e-57 | 5.559338e-54 |
| MsG0480018292.01 | MsG0580029919.01 | 0.842379 | 2.680613e-58 | 4.057151e-55 |
| MsG0480018292.01 | MsG0580030003.01 | 0.847907 | 8.590084e-60 | 1.549789e-56 |
| MsG0480018292.01 | MsG0580030204.01 | 0.810929 | 9.027228e-51 | 5.513725e-48 |
| MsG0480018292.01 | MsG0680031301.01 | 0.829701 | 4.442183e-55 | 4.581965e-52 |
| MsG0480018292.01 | MsG0680031536.01 | 0.808725 | 2.690036e-50 | 1.549561e-47 |
| MsG0480018292.01 | MsG0680031654.01 | 0.803781 | 2.959689e-49 | 1.500470e-46 |
| MsG0480018292.01 | MsG0680031699.01 | 0.826473 | 2.661742e-54 | 2.498596e-51 |
| MsG0480018292.01 | MsG0680031805.01 | -0.831851 | 1.320615e-55 | 1.450915e-52 |
| MsG0480018292.01 | MsG0680032075.01 | 0.840783 | 7.062441e-58 | 1.016831e-54 |
| MsG0480018292.01 | MsG0680033392.01 | 0.807584 | 4.706840e-50 | 2.631408e-47 |
| MsG0480018292.01 | MsG0680033926.01 | 0.840752 | 7.194700e-58 | 1.034889e-54 |
| MsG0480018292.01 | MsG0680034235.01 | 0.806449 | 8.181106e-50 | 4.441817e-47 |
| MsG0480018292.01 | MsG0680034476.01 | 0.837382 | 5.373938e-57 | 6.967948e-54 |
| MsG0480018292.01 | MsG0680034655.01 | 0.805496 | 1.298260e-49 | 6.878523e-47 |
| MsG0480018292.01 | MsG0680035306.01 | 0.815461 | 9.135513e-52 | 6.302808e-49 |
| MsG0480018292.01 | MsG0680035854.01 | 0.822104 | 2.831009e-53 | 2.346990e-50 |
| MsG0480018292.01 | MsG0780035937.01 | 0.816748 | 4.712605e-52 | 3.367723e-49 |
| MsG0480018292.01 | MsG0780036240.01 | 0.827388 | 1.608438e-54 | 1.550739e-51 |
| MsG0480018292.01 | MsG0780036247.01 | -0.805059 | 1.602911e-49 | 8.398065e-47 |
| MsG0480018292.01 | MsG0780036845.01 | 0.805405 | 1.356570e-49 | 7.170875e-47 |
| MsG0480018292.01 | MsG0780038907.01 | 0.814061 | 1.866531e-51 | 1.239683e-48 |
| MsG0480018292.01 | MsG0780039340.01 | 0.820942 | 5.252763e-53 | 4.215134e-50 |
| MsG0480018292.01 | MsG0780039828.01 | 0.847910 | 8.576118e-60 | 1.547393e-56 |
| MsG0480018292.01 | MsG0780039943.01 | 0.821903 | 3.151837e-53 | 2.598176e-50 |
| MsG0480018292.01 | MsG0780040125.01 | 0.823535 | 1.314712e-53 | 1.135082e-50 |
| MsG0480018292.01 | MsG0780040176.01 | 0.803637 | 3.169881e-49 | 1.601116e-46 |
| MsG0480018292.01 | MsG0780040182.01 | 0.812079 | 5.078000e-51 | 3.197514e-48 |
| MsG0480018292.01 | MsG0780040190.01 | 0.813997 | 1.927513e-51 | 1.277973e-48 |
| MsG0480018292.01 | MsG0780040208.01 | 0.836406 | 9.534119e-57 | 1.200319e-53 |
| MsG0480018292.01 | MsG0780040254.01 | 0.805540 | 1.270818e-49 | 6.740687e-47 |
| MsG0480018292.01 | MsG0780040375.01 | -0.845050 | 5.171751e-59 | 8.512866e-56 |
| MsG0480018292.01 | MsG0780040424.01 | 0.823212 | 1.564270e-53 | 1.338291e-50 |
| MsG0480018292.01 | MsG0780041192.01 | 0.827857 | 1.240982e-54 | 1.212805e-51 |
| MsG0480018292.01 | MsG0780041193.01 | 0.850141 | 2.056595e-60 | 3.989379e-57 |
| MsG0480018292.01 | MsG0780041194.01 | 0.800307 | 1.532853e-48 | 7.113930e-46 |
| MsG0480018292.01 | MsG0780041258.01 | 0.842431 | 2.596819e-58 | 3.937076e-55 |
| MsG0480018292.01 | MsG0780041300.01 | 0.834380 | 3.099992e-56 | 3.672550e-53 |
| MsG0480018292.01 | MsG0780041390.01 | 0.830091 | 3.569675e-55 | 3.723126e-52 |
| MsG0480018292.01 | MsG0780041482.01 | 0.840331 | 9.274765e-58 | 1.316642e-54 |
| MsG0480018292.01 | MsG0780041647.01 | 0.826524 | 2.587882e-54 | 2.432806e-51 |
| MsG0480018292.01 | MsG0780041671.01 | 0.801431 | 9.032851e-49 | 4.312991e-46 |
| MsG0480018292.01 | MsG0780041734.01 | -0.812861 | 3.426774e-51 | 2.203031e-48 |
| MsG0480018292.01 | MsG0880042033.01 | 0.811206 | 7.862434e-51 | 4.837193e-48 |
| MsG0480018292.01 | MsG0880042399.01 | -0.850301 | 1.854640e-60 | 3.616729e-57 |
| MsG0480018292.01 | MsG0880042795.01 | 0.814306 | 1.647990e-51 | 1.101878e-48 |
| MsG0480018292.01 | MsG0880042990.01 | 0.816229 | 6.158781e-52 | 4.339175e-49 |
| MsG0480018292.01 | MsG0880043162.01 | 0.817463 | 3.254701e-52 | 2.372019e-49 |
| MsG0480018292.01 | MsG0880043194.01 | 0.857410 | 1.663613e-62 | 4.101893e-59 |
| MsG0480018292.01 | MsG0880045329.01 | 0.845859 | 3.122254e-59 | 5.275060e-56 |
| MsG0480018292.01 | MsG0880045460.01 | 0.812317 | 4.504415e-51 | 2.854772e-48 |
| MsG0480018292.01 | MsG0880045498.01 | 0.812012 | 5.251426e-51 | 3.300661e-48 |
| MsG0480018292.01 | MsG0880045656.01 | 0.834910 | 2.279850e-56 | 2.744158e-53 |
| MsG0480018292.01 | MsG0880045684.01 | 0.807612 | 4.643119e-50 | 2.597743e-47 |
| MsG0480018292.01 | MsG0880045756.01 | 0.817212 | 3.706518e-52 | 2.682640e-49 |
| MsG0480018292.01 | MsG0880045869.01 | 0.806362 | 8.534697e-50 | 4.623341e-47 |
| MsG0480018292.01 | MsG0880046027.01 | 0.800702 | 1.273290e-48 | 5.968376e-46 |
| MsG0480018292.01 | MsG0880046068.01 | 0.812162 | 4.870570e-51 | 3.073891e-48 |
| MsG0480018292.01 | MsG0880046074.01 | 0.836679 | 8.123732e-57 | 1.031185e-53 |
| MsG0480018292.01 | MsG0880046877.01 | -0.821435 | 4.043215e-53 | 3.289133e-50 |
| MsG0480018292.01 | MsG0880047428.01 | 0.829890 | 3.996063e-55 | 4.144457e-52 |
| MsG0280006519.01 | MsG0480018292.01 | 0.804220 | 2.398081e-49 | 1.229513e-46 |
| MsG0280006679.01 | MsG0480018292.01 | 0.821172 | 4.649617e-53 | 3.754997e-50 |
| MsG0280006852.01 | MsG0480018292.01 | 0.820247 | 7.586043e-53 | 5.970758e-50 |
| MsG0280007165.01 | MsG0480018292.01 | -0.871761 | 5.342938e-67 | 2.180559e-63 |
| MsG0280007440.01 | MsG0480018292.01 | 0.819795 | 9.628374e-53 | 7.484017e-50 |
| MsG0280007441.01 | MsG0480018292.01 | 0.857812 | 1.264265e-62 | 3.159498e-59 |
| MsG0280007710.01 | MsG0480018292.01 | 0.811818 | 5.786717e-51 | 3.618165e-48 |
| MsG0280007775.01 | MsG0480018292.01 | 0.814671 | 1.368443e-51 | 9.239805e-49 |
| MsG0280008004.01 | MsG0480018292.01 | 0.809628 | 1.722537e-50 | 1.016552e-47 |
| MsG0280008234.01 | MsG0480018292.01 | 0.800410 | 1.460493e-48 | 6.795724e-46 |
| MsG0280009270.01 | MsG0480018292.01 | 0.837839 | 4.102215e-57 | 5.395353e-54 |
| MsG0280009441.01 | MsG0480018292.01 | 0.815541 | 8.770699e-52 | 6.064131e-49 |
| MsG0280009554.01 | MsG0480018292.01 | 0.837386 | 5.358432e-57 | 6.948704e-54 |
| MsG0280009575.01 | MsG0480018292.01 | 0.814196 | 1.742426e-51 | 1.161484e-48 |
| MsG0280009676.01 | MsG0480018292.01 | -0.807314 | 5.369004e-50 | 2.980932e-47 |
| MsG0280010411.01 | MsG0480018292.01 | 0.818978 | 1.477940e-52 | 1.123075e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018292.01.T01 | MTR_4g009110 | 80.453 | 353 | 42 | 3 | 1 | 328 | 1 | 351 | 0.0 | 527 |
| MsG0480018292.01.T01 | MTR_4g009540 | 72.493 | 349 | 56 | 6 | 1 | 327 | 1 | 331 | 4.50e-161 | 453 |
| MsG0480018292.01.T01 | MTR_4g009540 | 71.341 | 328 | 54 | 6 | 1 | 306 | 1 | 310 | 2.09e-147 | 417 |
| MsG0480018292.01.T01 | MTR_2g104550 | 46.407 | 334 | 148 | 6 | 1 | 326 | 1 | 311 | 1.34e-83 | 256 |
| MsG0480018292.01.T01 | MTR_2g104490 | 46.707 | 334 | 141 | 9 | 1 | 325 | 1 | 306 | 1.83e-79 | 245 |
| MsG0480018292.01.T01 | MTR_2g104490 | 45.079 | 315 | 136 | 9 | 1 | 306 | 1 | 287 | 3.03e-68 | 216 |
| MsG0480018292.01.T01 | MTR_2g104500 | 38.730 | 315 | 145 | 10 | 17 | 327 | 2 | 272 | 2.26e-56 | 184 |
| MsG0480018292.01.T01 | MTR_8g009020 | 44.800 | 250 | 115 | 3 | 91 | 327 | 84 | 323 | 8.61e-56 | 184 |
| MsG0480018292.01.T01 | MTR_2g104530 | 41.463 | 246 | 124 | 5 | 92 | 331 | 47 | 278 | 5.34e-50 | 168 |
| MsG0480018292.01.T01 | MTR_8g009010 | 36.810 | 326 | 121 | 8 | 24 | 324 | 4 | 269 | 5.80e-50 | 169 |
| MsG0480018292.01.T01 | MTR_2g104560 | 46.354 | 192 | 88 | 4 | 141 | 327 | 44 | 225 | 1.43e-47 | 160 |
| MsG0480018292.01.T01 | MTR_5g014520 | 42.979 | 235 | 125 | 3 | 96 | 327 | 102 | 330 | 6.70e-47 | 161 |
| MsG0480018292.01.T01 | MTR_7g080780 | 33.616 | 354 | 183 | 10 | 1 | 327 | 1 | 329 | 5.21e-46 | 159 |
| MsG0480018292.01.T01 | MTR_0246s0020 | 42.023 | 257 | 121 | 8 | 96 | 327 | 122 | 375 | 9.86e-46 | 160 |
| MsG0480018292.01.T01 | MTR_0250s0040 | 46.111 | 180 | 88 | 5 | 151 | 327 | 88 | 261 | 1.22e-45 | 156 |
| MsG0480018292.01.T01 | MTR_7g080780 | 33.234 | 337 | 175 | 9 | 18 | 327 | 3 | 316 | 7.55e-44 | 153 |
| MsG0480018292.01.T01 | MTR_5g014600 | 37.358 | 265 | 137 | 6 | 85 | 326 | 76 | 334 | 1.03e-43 | 153 |
| MsG0480018292.01.T01 | MTR_8g069740 | 37.457 | 291 | 141 | 12 | 25 | 305 | 6 | 265 | 3.29e-43 | 150 |
| MsG0480018292.01.T01 | MTR_4g066460 | 38.793 | 232 | 124 | 5 | 100 | 327 | 108 | 325 | 2.87e-42 | 149 |
| MsG0480018292.01.T01 | MTR_4g067010 | 41.837 | 196 | 104 | 3 | 134 | 327 | 130 | 317 | 1.29e-41 | 147 |
| MsG0480018292.01.T01 | MTR_4g097940 | 46.995 | 183 | 90 | 4 | 144 | 325 | 148 | 324 | 1.32e-41 | 147 |
| MsG0480018292.01.T01 | MTR_0246s0020 | 42.169 | 249 | 114 | 9 | 96 | 317 | 122 | 367 | 2.23e-41 | 148 |
| MsG0480018292.01.T01 | MTR_6g047570 | 36.400 | 250 | 140 | 4 | 82 | 327 | 98 | 332 | 2.60e-41 | 147 |
| MsG0480018292.01.T01 | MTR_0011s0260 | 38.866 | 247 | 141 | 5 | 87 | 327 | 114 | 356 | 5.25e-41 | 147 |
| MsG0480018292.01.T01 | MTR_5g014560 | 44.944 | 178 | 93 | 2 | 151 | 327 | 131 | 304 | 9.90e-41 | 145 |
| MsG0480018292.01.T01 | MTR_5g014640 | 32.298 | 322 | 184 | 8 | 28 | 326 | 13 | 323 | 1.66e-39 | 142 |
| MsG0480018292.01.T01 | MTR_0011s0210 | 38.057 | 247 | 143 | 5 | 87 | 327 | 114 | 356 | 3.51e-39 | 142 |
| MsG0480018292.01.T01 | MTR_4g097920 | 44.809 | 183 | 94 | 4 | 144 | 325 | 133 | 309 | 4.78e-39 | 140 |
| MsG0480018292.01.T01 | MTR_4g097920 | 44.809 | 183 | 94 | 4 | 144 | 325 | 148 | 324 | 7.59e-39 | 140 |
| MsG0480018292.01.T01 | MTR_0246s0050 | 37.037 | 243 | 126 | 6 | 89 | 327 | 98 | 317 | 4.38e-38 | 138 |
| MsG0480018292.01.T01 | MTR_4g098035 | 37.037 | 243 | 126 | 6 | 89 | 327 | 119 | 338 | 6.89e-38 | 138 |
| MsG0480018292.01.T01 | MTR_2g010450 | 46.629 | 178 | 89 | 3 | 147 | 322 | 173 | 346 | 1.85e-37 | 137 |
| MsG0480018292.01.T01 | MTR_4g066380 | 38.835 | 206 | 119 | 2 | 122 | 327 | 124 | 322 | 1.95e-37 | 137 |
| MsG0480018292.01.T01 | MTR_2g104650 | 33.987 | 306 | 151 | 12 | 25 | 324 | 6 | 266 | 1.55e-36 | 133 |
| MsG0480018292.01.T01 | MTR_4g092700 | 42.697 | 178 | 93 | 3 | 151 | 325 | 158 | 329 | 1.59e-35 | 132 |
| MsG0480018292.01.T01 | MTR_2g104590 | 40.860 | 186 | 87 | 4 | 140 | 324 | 58 | 221 | 1.60e-35 | 129 |
| MsG0480018292.01.T01 | MTR_4g097950 | 34.400 | 250 | 152 | 5 | 80 | 322 | 1 | 245 | 1.17e-34 | 127 |
| MsG0480018292.01.T01 | MTR_7g451650 | 40.000 | 185 | 93 | 4 | 141 | 322 | 23 | 192 | 1.64e-32 | 120 |
| MsG0480018292.01.T01 | MTR_4g009510 | 42.012 | 169 | 77 | 5 | 161 | 325 | 52 | 203 | 8.16e-31 | 115 |
| MsG0480018292.01.T01 | MTR_7g050350 | 42.361 | 144 | 66 | 3 | 181 | 322 | 2 | 130 | 1.28e-28 | 108 |
| MsG0480018292.01.T01 | MTR_7g451650 | 42.361 | 144 | 66 | 3 | 181 | 322 | 2 | 130 | 1.28e-28 | 108 |
| MsG0480018292.01.T01 | MTR_4g009420 | 39.506 | 162 | 76 | 3 | 161 | 322 | 53 | 192 | 6.94e-28 | 108 |
| MsG0480018292.01.T01 | MTR_7g451650 | 39.053 | 169 | 85 | 4 | 141 | 306 | 23 | 176 | 2.28e-26 | 103 |
| MsG0480018292.01.T01 | MTR_4g009420 | 39.850 | 133 | 59 | 2 | 174 | 306 | 65 | 176 | 1.70e-21 | 90.9 |
| MsG0480018292.01.T01 | MTR_8g067280 | 32.203 | 177 | 108 | 3 | 124 | 290 | 435 | 609 | 5.82e-18 | 85.1 |
| MsG0480018292.01.T01 | MTR_6g047550 | 37.063 | 143 | 68 | 4 | 82 | 217 | 112 | 239 | 6.93e-17 | 79.7 |
| MsG0480018292.01.T01 | MTR_5g014550 | 39.370 | 127 | 72 | 2 | 180 | 305 | 53 | 175 | 1.05e-16 | 77.8 |
| MsG0480018292.01.T01 | MTR_5g030430 | 28.125 | 160 | 107 | 2 | 139 | 290 | 481 | 640 | 3.79e-15 | 76.6 |
| MsG0480018292.01.T01 | MTR_8g024790 | 27.419 | 186 | 117 | 6 | 111 | 290 | 255 | 428 | 7.31e-15 | 75.5 |
| MsG0480018292.01.T01 | MTR_1g072320 | 25.253 | 198 | 131 | 5 | 142 | 325 | 458 | 652 | 7.97e-15 | 75.9 |
| MsG0480018292.01.T01 | MTR_8g024770 | 26.705 | 176 | 114 | 5 | 141 | 306 | 265 | 435 | 1.84e-13 | 71.2 |
| MsG0480018292.01.T01 | MTR_7g083900 | 26.064 | 188 | 119 | 4 | 152 | 326 | 287 | 467 | 3.02e-12 | 67.8 |
| MsG0480018292.01.T01 | MTR_8g027495 | 29.915 | 117 | 67 | 2 | 150 | 264 | 457 | 560 | 3.96e-12 | 67.4 |
| MsG0480018292.01.T01 | MTR_7g083900 | 25.532 | 188 | 119 | 4 | 152 | 326 | 287 | 466 | 5.80e-12 | 66.6 |
| MsG0480018292.01.T01 | MTR_0194s0050 | 23.404 | 235 | 129 | 8 | 120 | 325 | 166 | 378 | 9.07e-12 | 65.9 |
| MsG0480018292.01.T01 | MTR_8g098275 | 24.510 | 204 | 121 | 4 | 150 | 327 | 243 | 439 | 1.60e-11 | 65.5 |
| MsG0480018292.01.T01 | MTR_3g498695 | 27.152 | 151 | 101 | 3 | 141 | 283 | 288 | 437 | 2.38e-11 | 65.1 |
| MsG0480018292.01.T01 | MTR_3g498695 | 27.152 | 151 | 101 | 3 | 141 | 283 | 288 | 437 | 2.49e-11 | 64.7 |
| MsG0480018292.01.T01 | MTR_8g098275 | 24.510 | 204 | 121 | 4 | 150 | 327 | 400 | 596 | 2.55e-11 | 65.1 |
| MsG0480018292.01.T01 | MTR_8g098275 | 24.510 | 204 | 121 | 4 | 150 | 327 | 307 | 503 | 2.92e-11 | 64.7 |
| MsG0480018292.01.T01 | MTR_7g117670 | 29.565 | 115 | 70 | 2 | 150 | 264 | 401 | 504 | 6.37e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018292.01.T01 | AT4G37850 | 43.169 | 183 | 102 | 2 | 143 | 325 | 144 | 324 | 2.83e-40 | 144 |
| MsG0480018292.01.T01 | AT4G37850 | 43.169 | 183 | 102 | 2 | 143 | 325 | 144 | 324 | 2.83e-40 | 144 |
| MsG0480018292.01.T01 | AT2G22760 | 40.625 | 192 | 97 | 5 | 144 | 326 | 112 | 295 | 3.62e-35 | 130 |
| MsG0480018292.01.T01 | AT2G22770 | 37.788 | 217 | 112 | 5 | 130 | 325 | 104 | 318 | 9.51e-34 | 127 |
| MsG0480018292.01.T01 | AT2G22750 | 42.708 | 192 | 101 | 4 | 137 | 321 | 108 | 297 | 2.18e-33 | 125 |
| MsG0480018292.01.T01 | AT2G22750 | 42.708 | 192 | 101 | 4 | 137 | 321 | 132 | 321 | 3.35e-33 | 125 |
| MsG0480018292.01.T01 | AT2G22750 | 42.708 | 192 | 101 | 4 | 137 | 321 | 136 | 325 | 3.44e-33 | 125 |
| MsG0480018292.01.T01 | AT2G22760 | 42.690 | 171 | 82 | 4 | 144 | 306 | 112 | 274 | 2.00e-32 | 122 |
| MsG0480018292.01.T01 | AT2G22750 | 42.708 | 192 | 100 | 5 | 137 | 321 | 108 | 296 | 6.16e-32 | 121 |
| MsG0480018292.01.T01 | AT2G22750 | 42.708 | 192 | 100 | 5 | 137 | 321 | 136 | 324 | 8.38e-32 | 122 |
| MsG0480018292.01.T01 | AT5G46760 | 27.451 | 153 | 110 | 1 | 139 | 290 | 403 | 555 | 6.05e-15 | 76.3 |
| MsG0480018292.01.T01 | AT4G17880 | 29.299 | 157 | 98 | 3 | 139 | 290 | 404 | 552 | 8.46e-15 | 75.5 |
| MsG0480018292.01.T01 | AT1G63650 | 31.081 | 148 | 87 | 2 | 151 | 283 | 405 | 552 | 4.03e-14 | 73.6 |
| MsG0480018292.01.T01 | AT1G63650 | 31.081 | 148 | 87 | 2 | 151 | 283 | 405 | 552 | 4.03e-14 | 73.6 |
| MsG0480018292.01.T01 | AT1G63650 | 31.081 | 148 | 87 | 2 | 151 | 283 | 405 | 552 | 4.03e-14 | 73.6 |
| MsG0480018292.01.T01 | AT5G41315 | 30.065 | 153 | 87 | 4 | 151 | 283 | 441 | 593 | 3.22e-13 | 70.9 |
| MsG0480018292.01.T01 | AT5G41315 | 30.065 | 153 | 87 | 4 | 151 | 283 | 449 | 601 | 3.42e-13 | 70.9 |
| MsG0480018292.01.T01 | AT5G41315 | 30.065 | 153 | 87 | 4 | 151 | 283 | 446 | 598 | 3.60e-13 | 70.9 |
| MsG0480018292.01.T01 | AT1G32640 | 31.481 | 162 | 89 | 6 | 139 | 290 | 440 | 589 | 3.96e-13 | 70.5 |
| MsG0480018292.01.T01 | AT4G09820 | 25.397 | 189 | 116 | 4 | 138 | 326 | 350 | 513 | 3.34e-12 | 67.8 |
| MsG0480018292.01.T01 | AT3G61950 | 28.571 | 189 | 119 | 6 | 148 | 328 | 125 | 305 | 9.39e-12 | 65.5 |
| MsG0480018292.01.T01 | AT3G61950 | 28.571 | 189 | 119 | 6 | 148 | 328 | 176 | 356 | 1.11e-11 | 65.5 |
| MsG0480018292.01.T01 | AT1G12860 | 30.282 | 142 | 86 | 3 | 152 | 285 | 268 | 404 | 1.29e-11 | 65.5 |
| MsG0480018292.01.T01 | AT3G26744 | 28.649 | 185 | 117 | 5 | 110 | 283 | 266 | 446 | 1.45e-11 | 65.5 |
| MsG0480018292.01.T01 | AT3G61950 | 33.103 | 145 | 82 | 5 | 148 | 285 | 125 | 261 | 1.50e-11 | 64.7 |
| MsG0480018292.01.T01 | AT1G12860 | 27.322 | 183 | 116 | 4 | 152 | 326 | 268 | 441 | 1.67e-11 | 65.5 |
| MsG0480018292.01.T01 | AT2G46510 | 30.645 | 124 | 65 | 4 | 139 | 262 | 383 | 485 | 1.74e-11 | 65.5 |
| MsG0480018292.01.T01 | AT3G26744 | 28.649 | 185 | 117 | 5 | 110 | 283 | 266 | 446 | 1.76e-11 | 65.5 |
| MsG0480018292.01.T01 | AT3G26744 | 28.649 | 185 | 117 | 5 | 110 | 283 | 266 | 446 | 1.76e-11 | 65.5 |
| MsG0480018292.01.T01 | AT3G26744 | 28.649 | 185 | 117 | 5 | 110 | 283 | 266 | 446 | 1.76e-11 | 65.5 |
| MsG0480018292.01.T01 | AT5G57150 | 27.215 | 158 | 109 | 3 | 143 | 294 | 47 | 204 | 1.95e-11 | 63.2 |
| MsG0480018292.01.T01 | AT5G57150 | 27.215 | 158 | 109 | 3 | 143 | 294 | 47 | 204 | 2.12e-11 | 63.2 |
| MsG0480018292.01.T01 | AT5G57150 | 27.215 | 158 | 109 | 3 | 143 | 294 | 46 | 203 | 2.41e-11 | 63.2 |
| MsG0480018292.01.T01 | AT3G61950 | 33.103 | 145 | 82 | 5 | 148 | 285 | 176 | 312 | 2.69e-11 | 64.3 |
| MsG0480018292.01.T01 | AT5G57150 | 27.215 | 158 | 109 | 3 | 143 | 294 | 47 | 204 | 3.99e-11 | 63.2 |
| MsG0480018292.01.T01 | AT5G57150 | 27.215 | 158 | 109 | 3 | 143 | 294 | 46 | 203 | 4.08e-11 | 62.8 |
| MsG0480018292.01.T01 | AT1G01260 | 31.579 | 76 | 52 | 0 | 139 | 214 | 421 | 496 | 7.08e-11 | 63.5 |
| MsG0480018292.01.T01 | AT1G01260 | 31.579 | 76 | 52 | 0 | 139 | 214 | 421 | 496 | 7.08e-11 | 63.5 |
| MsG0480018292.01.T01 | AT1G01260 | 31.579 | 76 | 52 | 0 | 139 | 214 | 421 | 496 | 7.08e-11 | 63.5 |
Find 40 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACAACATCAAAACTTTC+TGG | 0.157589 | 4:+2913990 | None:intergenic |
| CTTGTGTTAATTTGAGTTCT+AGG | 0.232838 | 4:-2913788 | MsG0480018292.01.T01:CDS |
| ATGACTCTTGCTTCAATATC+TGG | 0.292442 | 4:+2911385 | None:intergenic |
| ATCCATTGTGAGAAACAAAA+TGG | 0.294137 | 4:-2911340 | MsG0480018292.01.T01:CDS |
| AAAGACAAAATGTATGTCTT+TGG | 0.328953 | 4:+2913846 | None:intergenic |
| GGTAGCAGTGTCTTGCCATT+TGG | 0.333645 | 4:-2911265 | MsG0480018292.01.T01:CDS |
| GTAGCAGTGTCTTGCCATTT+GGG | 0.353594 | 4:-2911264 | MsG0480018292.01.T01:CDS |
| CAATATCTGGAAGGATACTA+TGG | 0.374591 | 4:+2911398 | None:intergenic |
| TCACTTTAGCATCTTCTTTG+AGG | 0.383325 | 4:+2910582 | None:intergenic |
| AGAAACAAGAAGAAAATGTT+GGG | 0.406463 | 4:-2911513 | MsG0480018292.01.T01:CDS |
| GAAATAGTTGATTTCCCAAA+TGG | 0.414232 | 4:+2911250 | None:intergenic |
| AATCATCATCGTCAGTGTTA+AGG | 0.430939 | 4:+2914039 | None:intergenic |
| TTTCCCAATGACTCCTCCAT+TGG | 0.449389 | 4:+2914206 | None:intergenic |
| TTCCATCACTATAATTGCTC+GGG | 0.454181 | 4:-2911230 | MsG0480018292.01.T01:intron |
| TTTCCAATGGAGGAGTCATT+GGG | 0.455919 | 4:-2914209 | None:intergenic |
| TTTATATTGCAGATGGGAGA+TGG | 0.464639 | 4:-2910660 | MsG0480018292.01.T01:intron |
| CAATTTACCTTGCTCAAGCC+AGG | 0.465848 | 4:+2913597 | None:intergenic |
| CTCAAATTAACACAAGGTTC+TGG | 0.471060 | 4:+2913795 | None:intergenic |
| ACAGTGTATTGATCATATAA+TGG | 0.475067 | 4:-2913679 | MsG0480018292.01.T01:CDS |
| TGTTCTTGTTCTTGTTCTTG+TGG | 0.483186 | 4:+2913915 | None:intergenic |
| GAGAAACAAGAAGAAAATGT+TGG | 0.486811 | 4:-2911514 | MsG0480018292.01.T01:CDS |
| TTTCCATCACTATAATTGCT+CGG | 0.489893 | 4:-2911231 | MsG0480018292.01.T01:CDS |
| ATATAATGGCAGAGAGAAAA+CGG | 0.495978 | 4:-2913665 | MsG0480018292.01.T01:CDS |
| AAAACTAATCAACAAATCAA+TGG | 0.499326 | 4:-2913726 | MsG0480018292.01.T01:CDS |
| ACACAAGGTTCTGGTGTAGC+TGG | 0.499575 | 4:+2913804 | None:intergenic |
| GATATTGAAGCAAGAGTCAT+GGG | 0.509819 | 4:-2911382 | MsG0480018292.01.T01:CDS |
| AATCTTCAACTGTTTGTCAC+TGG | 0.515596 | 4:-2911286 | MsG0480018292.01.T01:CDS |
| CAAATCAATGGAGCTAAGAA+AGG | 0.524101 | 4:-2913714 | MsG0480018292.01.T01:CDS |
| TACCCGAGCAATTATAGTGA+TGG | 0.541857 | 4:+2911228 | None:intergenic |
| TTATATTGCAGATGGGAGAT+GGG | 0.554862 | 4:-2910659 | MsG0480018292.01.T01:intron |
| AGATATTGAAGCAAGAGTCA+TGG | 0.568127 | 4:-2911383 | MsG0480018292.01.T01:CDS |
| TACTATTCCTGGCTTGAGCA+AGG | 0.585542 | 4:-2913604 | MsG0480018292.01.T01:intron |
| AAAGCTTCAATACTTCAAGC+AGG | 0.588462 | 4:-2911580 | MsG0480018292.01.T01:CDS |
| AACAAATCACAAAATTCATG+TGG | 0.589942 | 4:-2911472 | MsG0480018292.01.T01:CDS |
| CTCTTGCTTCAATATCTGGA+AGG | 0.599921 | 4:+2911389 | None:intergenic |
| CTAGAACTCAAATTAACACA+AGG | 0.614675 | 4:+2913789 | None:intergenic |
| GTGTTGTAGGAATTGGATTG+CGG | 0.620465 | 4:-2914092 | MsG0480018292.01.T01:intron |
| TGAAGCAAGAGTCATGGGAA+AGG | 0.625639 | 4:-2911377 | MsG0480018292.01.T01:CDS |
| CAAGAACAAGAACAACAACA+TGG | 0.670092 | 4:-2913906 | MsG0480018292.01.T01:CDS |
| GAAACAAGAAGAAAATGTTG+GGG | 0.696078 | 4:-2911512 | MsG0480018292.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAATATATATAAAAAAA+TGG | - | Chr4:2911315-2911334 | MsG0480018292.01.T01:CDS | 0.0% |
| !!! | TATTAAATAATTAGTTTCAT+CGG | - | Chr4:2911252-2911271 | MsG0480018292.01.T01:CDS | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | + | Chr4:2912505-2912524 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | + | Chr4:2912506-2912525 | None:intergenic | 10.0% |
| !! | AAAAAAAATTGATACAAAAG+AGG | + | Chr4:2913142-2913161 | None:intergenic | 15.0% |
| !! | AAAAAAATTGATACAAAAGA+GGG | + | Chr4:2913141-2913160 | None:intergenic | 15.0% |
| !! | AATATTTCTTCAAATAACTA+AGG | + | Chr4:2912956-2912975 | None:intergenic | 15.0% |
| !! | ACTAATTATTTAATATGAGA+TGG | + | Chr4:2911247-2911266 | None:intergenic | 15.0% |
| !! | ATATTTCTTCAAATAACTAA+GGG | + | Chr4:2912955-2912974 | None:intergenic | 15.0% |
| !! | ATTACTCAAAATTCTAATTT+AGG | + | Chr4:2913929-2913948 | None:intergenic | 15.0% |
| !! | TCTGATTAATAAAGAAATAA+AGG | - | Chr4:2912311-2912330 | MsG0480018292.01.T01:intron | 15.0% |
| !! | TGTAAATTAATAAATTTCTC+CGG | - | Chr4:2912790-2912809 | MsG0480018292.01.T01:intron | 15.0% |
| !!! | AATGCATCTTTTTAAATTTT+TGG | + | Chr4:2912006-2912025 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | + | Chr4:2912429-2912448 | None:intergenic | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | - | Chr4:2912391-2912410 | MsG0480018292.01.T01:intron | 15.0% |
| !!! | TTGTTTTCTATAAAATGAAA+AGG | - | Chr4:2914031-2914050 | MsG0480018292.01.T01:CDS | 15.0% |
| !! | AAAACTAATCAACAAATCAA+TGG | - | Chr4:2911064-2911083 | MsG0480018292.01.T01:intron | 20.0% |
| !! | AAACTCTTTGAATTAATACT+CGG | - | Chr4:2912353-2912372 | MsG0480018292.01.T01:intron | 20.0% |
| !! | AATTATTTAATATGAGATGG+AGG | + | Chr4:2911244-2911263 | None:intergenic | 20.0% |
| !! | ATATTACTTTATATTGCAGA+TGG | - | Chr4:2914123-2914142 | MsG0480018292.01.T01:intron | 20.0% |
| !! | CATATACTGTATAAGATAAT+AGG | + | Chr4:2911970-2911989 | None:intergenic | 20.0% |
| !! | CCTGACATTATTAATTTATA+GGG | - | Chr4:2912814-2912833 | MsG0480018292.01.T01:intron | 20.0% |
| !! | TAATACGATGAACTAAAATA+AGG | + | Chr4:2913029-2913048 | None:intergenic | 20.0% |
| !! | TATTACTTTATATTGCAGAT+GGG | - | Chr4:2914124-2914143 | MsG0480018292.01.T01:intron | 20.0% |
| !! | TATTGTGTAGATTATTTGAA+AGG | + | Chr4:2911689-2911708 | None:intergenic | 20.0% |
| !! | TCAACTAGATAAAAAATCTT+GGG | - | Chr4:2912180-2912199 | MsG0480018292.01.T01:intron | 20.0% |
| !! | TCCTGACATTATTAATTTAT+AGG | - | Chr4:2912813-2912832 | MsG0480018292.01.T01:intron | 20.0% |
| !! | TGTCAATTTGAAAAAGAAAA+AGG | - | Chr4:2913794-2913813 | MsG0480018292.01.T01:CDS | 20.0% |
| !! | TTCAACTAGATAAAAAATCT+TGG | - | Chr4:2912179-2912198 | MsG0480018292.01.T01:intron | 20.0% |
| !!! | AATGTCAATTTCAAGTTTAA+TGG | - | Chr4:2912997-2913016 | MsG0480018292.01.T01:intron | 20.0% |
| !!! | AATTTCATTTCTTTTCTCTT+AGG | - | Chr4:2913110-2913129 | MsG0480018292.01.T01:intron | 20.0% |
| !!! | CGGTTAATATATTTCATTTT+TGG | + | Chr4:2911501-2911520 | None:intergenic | 20.0% |
| !!! | TATATAATTTTGTGTGTTGT+AGG | - | Chr4:2910685-2910704 | MsG0480018292.01.T01:intron | 20.0% |
| !!! | TCGAATTTTTAAGAATAAAC+AGG | + | Chr4:2911655-2911674 | None:intergenic | 20.0% |
| !!! | TGATTTTGATAATCATGAAA+AGG | - | Chr4:2911851-2911870 | MsG0480018292.01.T01:intron | 20.0% |
| ! | AAAGACAAAATGTATGTCTT+TGG | + | Chr4:2910947-2910966 | None:intergenic | 25.0% |
| ! | AACAAATCACAAAATTCATG+TGG | - | Chr4:2913318-2913337 | MsG0480018292.01.T01:intron | 25.0% |
| ! | AAGTATGGTTGAGAAAAATA+TGG | - | Chr4:2913976-2913995 | MsG0480018292.01.T01:CDS | 25.0% |
| ! | AATGTACATACCAAACAAAA+AGG | + | Chr4:2912710-2912729 | None:intergenic | 25.0% |
| ! | AGAAACAAGAAGAAAATGTT+GGG | - | Chr4:2913277-2913296 | MsG0480018292.01.T01:intron | 25.0% |
| ! | ATTTAGCACTTATCAAAGTA+TGG | - | Chr4:2913961-2913980 | MsG0480018292.01.T01:CDS | 25.0% |
| ! | CAACTAGATAAAAAATCTTG+GGG | - | Chr4:2912181-2912200 | MsG0480018292.01.T01:intron | 25.0% |
| ! | CCCTATAAATTAATAATGTC+AGG | + | Chr4:2912817-2912836 | None:intergenic | 25.0% |
| ! | GTTTCTACTGTATATCAATT+TGG | + | Chr4:2912337-2912356 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | + | Chr4:2912812-2912831 | None:intergenic | 25.0% |
| ! | TAATCATACTGACGTATATA+CGG | + | Chr4:2911919-2911938 | None:intergenic | 25.0% |
| ! | TGTATTGTTAAAATCACATG+TGG | - | Chr4:2912096-2912115 | MsG0480018292.01.T01:intron | 25.0% |
| !! | AAAAAGATGCATTAACCTTT+TGG | - | Chr4:2912013-2912032 | MsG0480018292.01.T01:intron | 25.0% |
| !! | ACAGTGTATTGATCATATAA+TGG | - | Chr4:2911111-2911130 | MsG0480018292.01.T01:intron | 25.0% |
| !! | ACAGTTGAAGATTTTCAATA+TGG | + | Chr4:2913497-2913516 | None:intergenic | 25.0% |
| !! | ACATGGTTTGAAATCAAAAA+AGG | - | Chr4:2910901-2910920 | MsG0480018292.01.T01:intron | 25.0% |
| !! | AGAGATCCCTTTATAATTTT+CGG | - | Chr4:2912478-2912497 | MsG0480018292.01.T01:intron | 25.0% |
| !!! | ATGAATTTTGTGATTTGTTG+AGG | + | Chr4:2913317-2913336 | None:intergenic | 25.0% |
| !!! | CGCTATTTTACGTATAAAAA+CGG | - | Chr4:2913885-2913904 | MsG0480018292.01.T01:CDS | 25.0% |
| !!! | CTTTTTCAAATTGACATCAA+TGG | + | Chr4:2913790-2913809 | None:intergenic | 25.0% |
| !!! | GCTCAATTTTTTTTGAGATA+TGG | - | Chr4:2914000-2914019 | MsG0480018292.01.T01:CDS | 25.0% |
| !!! | TGAATTTTGTGATTTGTTGA+GGG | + | Chr4:2913316-2913335 | None:intergenic | 25.0% |
| ACATGTGCAAATCAACTATA+TGG | - | Chr4:2913071-2913090 | MsG0480018292.01.T01:intron | 30.0% | |
| AGATAATAGGACATGGTAAT+CGG | + | Chr4:2911957-2911976 | None:intergenic | 30.0% | |
| ATATAATGGCAGAGAGAAAA+CGG | - | Chr4:2911125-2911144 | MsG0480018292.01.T01:intron | 30.0% | |
| ATCCATTGTGAGAAACAAAA+TGG | - | Chr4:2913450-2913469 | MsG0480018292.01.T01:intron | 30.0% | |
| ATTTCGAACAAGTCATCATT+CGG | - | Chr4:2912902-2912921 | MsG0480018292.01.T01:intron | 30.0% | |
| CTAGAACTCAAATTAACACA+AGG | + | Chr4:2911004-2911023 | None:intergenic | 30.0% | |
| CTGTATAAGATAATAGGACA+TGG | + | Chr4:2911964-2911983 | None:intergenic | 30.0% | |
| GAAACAAGAAGAAAATGTTG+GGG | - | Chr4:2913278-2913297 | MsG0480018292.01.T01:intron | 30.0% | |
| GAGAAACAAGAAGAAAATGT+TGG | - | Chr4:2913276-2913295 | MsG0480018292.01.T01:intron | 30.0% | |
| GGAGGTAGCATAATTTAATA+GGG | + | Chr4:2911226-2911245 | None:intergenic | 30.0% | |
| TACACAATAACTAGCCAAAT+TGG | - | Chr4:2911700-2911719 | MsG0480018292.01.T01:intron | 30.0% | |
| TATTCATGTTCTTGATGAGT+TGG | - | Chr4:2913602-2913621 | MsG0480018292.01.T01:intron | 30.0% | |
| TGGAGGTAGCATAATTTAAT+AGG | + | Chr4:2911227-2911246 | None:intergenic | 30.0% | |
| TTGGGACCGAAAATTATAAA+GGG | + | Chr4:2912487-2912506 | None:intergenic | 30.0% | |
| TTTCAAATATTGCCCTACAA+TGG | + | Chr4:2913689-2913708 | None:intergenic | 30.0% | |
| TTTCCATCACTATAATTGCT+CGG | - | Chr4:2913559-2913578 | MsG0480018292.01.T01:intron | 30.0% | |
| ! | ATGTGTTTCTACATCCAATT+TGG | + | Chr4:2911717-2911736 | None:intergenic | 30.0% |
| ! | ATTTTGTGTGTTGTAGGAAT+TGG | - | Chr4:2910691-2910710 | MsG0480018292.01.T01:intron | 30.0% |
| ! | CTTGTGTTAATTTGAGTTCT+AGG | - | Chr4:2911002-2911021 | MsG0480018292.01.T01:intron | 30.0% |
| ! | GAAATAGTTGATTTCCCAAA+TGG | + | Chr4:2913543-2913562 | None:intergenic | 30.0% |
| ! | GAATTCCTCAAATTCTAAGA+TGG | - | Chr4:2913645-2913664 | MsG0480018292.01.T01:CDS | 30.0% |
| ! | TAAAAAAAGGTACAATCACG+TGG | + | Chr4:2912057-2912076 | None:intergenic | 30.0% |
| !! | GACTAATTTGCCTTTTTGTT+TGG | - | Chr4:2912697-2912716 | MsG0480018292.01.T01:intron | 30.0% |
| !! | TTCCATTTTGTTTCTCACAA+TGG | + | Chr4:2913455-2913474 | None:intergenic | 30.0% |
| !!! | AGGGTTTTAACTGTATTAGA+GGG | - | Chr4:2912833-2912852 | MsG0480018292.01.T01:intron | 30.0% |
| !!! | CACGATCATCATTGTTTTTA+TGG | - | Chr4:2913750-2913769 | MsG0480018292.01.T01:CDS | 30.0% |
| !!! | TAGGGTTTTAACTGTATTAG+AGG | - | Chr4:2912832-2912851 | MsG0480018292.01.T01:intron | 30.0% |
| !!! | TTTTGATGTTGTTGGTAACA+TGG | - | Chr4:2910808-2910827 | MsG0480018292.01.T01:intron | 30.0% |
| AAAGCTTCAATACTTCAAGC+AGG | - | Chr4:2913210-2913229 | MsG0480018292.01.T01:intron | 35.0% | |
| AATCATCATCGTCAGTGTTA+AGG | + | Chr4:2910754-2910773 | None:intergenic | 35.0% | |
| AATCTTCAACTGTTTGTCAC+TGG | - | Chr4:2913504-2913523 | MsG0480018292.01.T01:intron | 35.0% | |
| ACAATCACGTGGTTTATGAT+GGG | + | Chr4:2912046-2912065 | None:intergenic | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | + | Chr4:2912623-2912642 | None:intergenic | 35.0% | |
| AGATATTGAAGCAAGAGTCA+TGG | - | Chr4:2913407-2913426 | MsG0480018292.01.T01:intron | 35.0% | |
| ATGACTCTTGCTTCAATATC+TGG | + | Chr4:2913408-2913427 | None:intergenic | 35.0% | |
| CAAATCAATGGAGCTAAGAA+AGG | - | Chr4:2911076-2911095 | MsG0480018292.01.T01:intron | 35.0% | |
| CAAGAACAAGAACAACAACA+TGG | - | Chr4:2910884-2910903 | MsG0480018292.01.T01:intron | 35.0% | |
| CAATATCTGGAAGGATACTA+TGG | + | Chr4:2913395-2913414 | None:intergenic | 35.0% | |
| CCAACAACATCAAAACTTTC+TGG | + | Chr4:2910803-2910822 | None:intergenic | 35.0% | |
| CTAATTTACGTTGAGTCACA+AGG | - | Chr4:2912645-2912664 | MsG0480018292.01.T01:intron | 35.0% | |
| CTCAAATTAACACAAGGTTC+TGG | + | Chr4:2910998-2911017 | None:intergenic | 35.0% | |
| CTTGGGACCGAAAATTATAA+AGG | + | Chr4:2912488-2912507 | None:intergenic | 35.0% | |
| GATATTGAAGCAAGAGTCAT+GGG | - | Chr4:2913408-2913427 | MsG0480018292.01.T01:intron | 35.0% | |
| TACAATCACGTGGTTTATGA+TGG | + | Chr4:2912047-2912066 | None:intergenic | 35.0% | |
| TGATAACAATGATACTCCAC+TGG | - | Chr4:2911879-2911898 | MsG0480018292.01.T01:intron | 35.0% | |
| TGTTCTTGTTCTTGTTCTTG+TGG | + | Chr4:2910878-2910897 | None:intergenic | 35.0% | |
| TTATATTGCAGATGGGAGAT+GGG | - | Chr4:2914131-2914150 | MsG0480018292.01.T01:intron | 35.0% | |
| TTCCATCACTATAATTGCTC+GGG | - | Chr4:2913560-2913579 | MsG0480018292.01.T01:intron | 35.0% | |
| TTTATATTGCAGATGGGAGA+TGG | - | Chr4:2914130-2914149 | MsG0480018292.01.T01:intron | 35.0% | |
| ! | GGGAAATTTTCATCTTGACA+TGG | - | Chr4:2910601-2910620 | MsG0480018292.01.T01:CDS | 35.0% |
| ! | TTTGGAGAAGAACTTTTACG+AGG | + | Chr4:2910929-2910948 | None:intergenic | 35.0% |
| ! | TTTTTACATTGGCCCAAGTT+GGG | + | Chr4:2912418-2912437 | None:intergenic | 35.0% |
| !! | CCAGAAAGTTTTGATGTTGT+TGG | - | Chr4:2910800-2910819 | MsG0480018292.01.T01:intron | 35.0% |
| !!! | CAGCTTTTTGAGTACTTTCA+CGG | + | Chr4:2911039-2911058 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+TGG | + | Chr4:2912419-2912438 | None:intergenic | 35.0% |
| AACGTCACTGCATTCTTGAA+AGG | + | Chr4:2912214-2912233 | None:intergenic | 40.0% | |
| ACGTCACTGCATTCTTGAAA+GGG | + | Chr4:2912213-2912232 | None:intergenic | 40.0% | |
| ACGTTAAATAGCTTGAGGTG+AGG | - | Chr4:2912229-2912248 | MsG0480018292.01.T01:intron | 40.0% | |
| ATTGATTGACGGTCCATTGT+AGG | - | Chr4:2913673-2913692 | MsG0480018292.01.T01:CDS | 40.0% | |
| CAGTGACGTTAAATAGCTTG+AGG | - | Chr4:2912224-2912243 | MsG0480018292.01.T01:intron | 40.0% | |
| CGCTGAAACGTAATTCTAAG+AGG | - | Chr4:2912670-2912689 | MsG0480018292.01.T01:intron | 40.0% | |
| CGTATATACGGTATGACTGA+AGG | + | Chr4:2911907-2911926 | None:intergenic | 40.0% | |
| CTCTTGCTTCAATATCTGGA+AGG | + | Chr4:2913404-2913423 | None:intergenic | 40.0% | |
| GCGATCCATCTTAGAATTTG+AGG | + | Chr4:2913653-2913672 | None:intergenic | 40.0% | |
| GTGTTGTAGGAATTGGATTG+CGG | - | Chr4:2910698-2910717 | MsG0480018292.01.T01:intron | 40.0% | |
| TACCCGAGCAATTATAGTGA+TGG | + | Chr4:2913565-2913584 | None:intergenic | 40.0% | |
| TTGATTGACGGTCCATTGTA+GGG | - | Chr4:2913674-2913693 | MsG0480018292.01.T01:CDS | 40.0% | |
| ! | GAGGGAAGCTGTAGAATTTT+TGG | - | Chr4:2912851-2912870 | MsG0480018292.01.T01:intron | 40.0% |
| ! | GCATTTTCAGCTACTATTCC+TGG | - | Chr4:2911175-2911194 | MsG0480018292.01.T01:intron | 40.0% |
| !! | AGATGGATCGCATTGATTGA+CGG | - | Chr4:2913662-2913681 | MsG0480018292.01.T01:CDS | 40.0% |
| AAATTTGTCCGGTCCCAACT+TGG | - | Chr4:2912402-2912421 | MsG0480018292.01.T01:intron | 45.0% | |
| AATTTGTCCGGTCCCAACTT+GGG | - | Chr4:2912403-2912422 | MsG0480018292.01.T01:intron | 45.0% | |
| CAATTTACCTTGCTCAAGCC+AGG | + | Chr4:2911196-2911215 | None:intergenic | 45.0% | |
| TGAAGCAAGAGTCATGGGAA+AGG | - | Chr4:2913413-2913432 | MsG0480018292.01.T01:intron | 45.0% | |
| ! | ATCACGTGGTTTATGATGGG+CGG | + | Chr4:2912043-2912062 | None:intergenic | 45.0% |
| ! | CTGGCTTGAGCAAGGTAAAT+TGG | - | Chr4:2911194-2911213 | MsG0480018292.01.T01:intron | 45.0% |
| ! | GTAGCAGTGTCTTGCCATTT+GGG | - | Chr4:2913526-2913545 | MsG0480018292.01.T01:intron | 45.0% |
| ! | TACTATTCCTGGCTTGAGCA+AGG | - | Chr4:2911186-2911205 | MsG0480018292.01.T01:intron | 45.0% |
| ! | TGTTGCTTACGGGGCATTAA+CGG | + | Chr4:2911521-2911540 | None:intergenic | 45.0% |
| !! | AGCACCCTATGTGTTGCTTA+CGG | + | Chr4:2911532-2911551 | None:intergenic | 45.0% |
| !!! | GGTGAGGTTTGTCACTTTTC+TGG | - | Chr4:2912245-2912264 | MsG0480018292.01.T01:intron | 45.0% |
| !!! | ACATTTTTATATATAAAAAA+AGG | + | Chr4:2912070-2912089 | None:intergenic | 5.0% |
| !!! | TTTTTTTATATATAAAAATG+TGG | - | Chr4:2912069-2912088 | MsG0480018292.01.T01:intron | 5.0% |
| ATGCCCCGTAAGCAACACAT+AGG | - | Chr4:2911524-2911543 | MsG0480018292.01.T01:CDS | 50.0% | |
| GGTAGCAGTGTCTTGCCATT+TGG | - | Chr4:2913525-2913544 | MsG0480018292.01.T01:intron | 50.0% | |
| GGTATGACTGAAGGATCCAG+TGG | + | Chr4:2911898-2911917 | None:intergenic | 50.0% | |
| TGCCCCGTAAGCAACACATA+GGG | - | Chr4:2911525-2911544 | MsG0480018292.01.T01:CDS | 50.0% | |
| ! | ACACAAGGTTCTGGTGTAGC+TGG | + | Chr4:2910989-2911008 | None:intergenic | 50.0% |
| !! | CACCCTATGTGTTGCTTACG+GGG | + | Chr4:2911530-2911549 | None:intergenic | 50.0% |
| !! | GCACCCTATGTGTTGCTTAC+GGG | + | Chr4:2911531-2911550 | None:intergenic | 50.0% |
| !! | TCACGTGGTTTATGATGGGC+GGG | + | Chr4:2912042-2912061 | None:intergenic | 50.0% |
| ! | ACATTGGCCCAAGTTGGGAC+CGG | + | Chr4:2912413-2912432 | None:intergenic | 55.0% |
| !! | ATGATGGGCGGGGTACCAAA+AGG | + | Chr4:2912031-2912050 | None:intergenic | 55.0% |
| !! | CACGTGGTTTATGATGGGCG+GGG | + | Chr4:2912041-2912060 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 2910587 | 2914225 | 2910587 | ID=MsG0480018292.01;Name=MsG0480018292.01 |
| Chr4 | mRNA | 2910587 | 2914225 | 2910587 | ID=MsG0480018292.01.T01;Parent=MsG0480018292.01;Name=MsG0480018292.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|1|1|4|0|332 |
| Chr4 | exon | 2914190 | 2914225 | 2914190 | ID=MsG0480018292.01.T01:exon:16449;Parent=MsG0480018292.01.T01 |
| Chr4 | exon | 2913605 | 2914105 | 2913605 | ID=MsG0480018292.01.T01:exon:16450;Parent=MsG0480018292.01.T01 |
| Chr4 | exon | 2911231 | 2911608 | 2911231 | ID=MsG0480018292.01.T01:exon:16451;Parent=MsG0480018292.01.T01 |
| Chr4 | exon | 2910587 | 2910670 | 2910587 | ID=MsG0480018292.01.T01:exon:16452;Parent=MsG0480018292.01.T01 |
| Chr4 | CDS | 2914190 | 2914225 | 2914190 | ID=MsG0480018292.01.T01:cds;Parent=MsG0480018292.01.T01 |
| Chr4 | CDS | 2913605 | 2914105 | 2913605 | ID=MsG0480018292.01.T01:cds;Parent=MsG0480018292.01.T01 |
| Chr4 | CDS | 2911231 | 2911608 | 2911231 | ID=MsG0480018292.01.T01:cds;Parent=MsG0480018292.01.T01 |
| Chr4 | CDS | 2910587 | 2910670 | 2910587 | ID=MsG0480018292.01.T01:cds;Parent=MsG0480018292.01.T01 |
| Gene Sequence |
| Protein sequence |
