AlfalfaGEDB | MsG0380013579.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013579.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013579.01.T01	XP_027344109.1	68.269	104	11	1	1	82	48	151	8.32E-38	136

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013579.01.T01	O80854	42.857	105	37	1	1	82	45	149	3.48E-23	91.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013579.01.T01	A0A3Q0EK09	65.714	105	13	1	1	82	1	105	2.06e-37	133

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047812.01	MsG0380013579.01	0.801377	9.265597e-49	4.418121e-46
MsG0080047814.01	MsG0380013579.01	0.826990	2.003037e-54	1.908580e-51
MsG0080048058.01	MsG0380013579.01	0.824909	6.249837e-54	5.611888e-51
MsG0080048383.01	MsG0380013579.01	0.842066	3.243668e-58	4.860776e-55
MsG0080048687.01	MsG0380013579.01	0.872165	3.921121e-67	1.624062e-63
MsG0080048968.01	MsG0380013579.01	0.806457	8.151397e-50	4.426574e-47
MsG0080049135.01	MsG0380013579.01	0.809871	1.527569e-50	9.072210e-48
MsG0180000001.01	MsG0380013579.01	0.835654	1.479662e-56	1.821099e-53
MsG0180000023.01	MsG0380013579.01	0.809532	1.806647e-50	1.063392e-47
MsG0180000101.01	MsG0380013579.01	0.826873	2.135931e-54	2.028208e-51
MsG0180000144.01	MsG0380013579.01	0.819366	1.206358e-52	9.263805e-50
MsG0180000339.01	MsG0380013579.01	0.834444	2.987052e-56	3.545523e-53
MsG0180000400.01	MsG0380013579.01	-0.806518	7.912571e-50	4.303505e-47
MsG0180000580.01	MsG0380013579.01	0.804871	1.754137e-49	9.147088e-47
MsG0180000611.01	MsG0380013579.01	0.820376	7.086163e-53	5.597718e-50
MsG0180000806.01	MsG0380013579.01	0.847000	1.524969e-59	2.672527e-56
MsG0180000824.01	MsG0380013579.01	0.810263	1.257072e-50	7.542690e-48
MsG0180000836.01	MsG0380013579.01	0.812177	4.833012e-51	3.051418e-48
MsG0180001173.01	MsG0380013579.01	0.828531	8.535772e-55	8.507334e-52
MsG0180001235.01	MsG0380013579.01	0.800342	1.507610e-48	7.002941e-46
MsG0180001237.01	MsG0380013579.01	0.842196	2.996474e-58	4.508502e-55
MsG0180001260.01	MsG0380013579.01	0.825904	3.633747e-54	3.356607e-51
MsG0180001294.01	MsG0380013579.01	0.817118	3.892117e-52	2.809641e-49
MsG0180001566.01	MsG0380013579.01	0.801943	7.091713e-49	3.430253e-46
MsG0180001599.01	MsG0380013579.01	0.867348	1.462220e-65	5.089041e-62
MsG0180002283.01	MsG0380013579.01	0.845804	3.231076e-59	5.449285e-56
MsG0180002489.01	MsG0380013579.01	0.816557	5.199667e-52	3.696363e-49
MsG0180002547.01	MsG0380013579.01	0.806361	8.538893e-50	4.625481e-47
MsG0180003031.01	MsG0380013579.01	0.807775	4.286906e-50	2.408732e-47
MsG0180003303.01	MsG0380013579.01	0.830472	2.881102e-55	3.038300e-52
MsG0180003548.01	MsG0380013579.01	0.802006	6.883257e-49	3.334830e-46
MsG0180003572.01	MsG0380013579.01	0.817017	4.101617e-52	2.952917e-49
MsG0180003627.01	MsG0380013579.01	0.812517	4.074998e-51	2.596399e-48
MsG0180003744.01	MsG0380013579.01	0.848477	5.978666e-60	1.098705e-56
MsG0180003793.01	MsG0380013579.01	0.844555	7.032235e-59	1.139539e-55
MsG0180003860.01	MsG0380013579.01	0.835566	1.557763e-56	1.912116e-53
MsG0180003977.01	MsG0380013579.01	0.805948	1.042967e-49	5.590790e-47
MsG0180004009.01	MsG0380013579.01	0.823597	1.271592e-53	1.099833e-50
MsG0180004016.01	MsG0380013579.01	0.849554	3.001198e-60	5.710367e-57
MsG0180004050.01	MsG0380013579.01	0.839506	1.521045e-57	2.104933e-54
MsG0180004056.01	MsG0380013579.01	0.809050	2.291074e-50	1.331302e-47
MsG0180004128.01	MsG0380013579.01	0.832753	7.898508e-56	8.911409e-53
MsG0180004160.01	MsG0380013579.01	0.822927	1.822527e-53	1.546837e-50
MsG0180004398.01	MsG0380013579.01	0.801888	7.280307e-49	3.516809e-46
MsG0180004481.01	MsG0380013579.01	0.813482	2.502930e-51	1.636561e-48
MsG0180004482.01	MsG0380013579.01	0.800321	1.522557e-48	7.068601e-46
MsG0180004598.01	MsG0380013579.01	0.823007	1.746193e-53	1.485423e-50
MsG0180004645.01	MsG0380013579.01	0.812567	3.972944e-51	2.534677e-48
MsG0180004754.01	MsG0380013579.01	0.806814	6.851405e-50	3.754882e-47
MsG0180004767.01	MsG0380013579.01	0.872717	2.565367e-67	1.084629e-63
MsG0180004854.01	MsG0380013579.01	0.829589	4.729619e-55	4.862157e-52
MsG0180004861.01	MsG0380013579.01	0.821616	3.672609e-53	3.002676e-50
MsG0180004991.01	MsG0380013579.01	0.817267	3.602686e-52	2.611298e-49
MsG0180005049.01	MsG0380013579.01	0.867937	9.463716e-66	3.362564e-62
MsG0180005337.01	MsG0380013579.01	0.806065	9.859519e-50	5.300876e-47
MsG0180005407.01	MsG0380013579.01	0.824591	7.430855e-54	6.611740e-51
MsG0180005443.01	MsG0380013579.01	0.836985	6.788383e-57	8.696929e-54
MsG0180005451.01	MsG0380013579.01	0.827376	1.618893e-54	1.560310e-51
MsG0180005575.01	MsG0380013579.01	0.808329	3.267275e-50	1.862918e-47
MsG0180005765.01	MsG0380013579.01	0.869326	3.367708e-66	1.258775e-62
MsG0180005786.01	MsG0380013579.01	0.803741	3.016073e-49	1.527509e-46
MsG0180006013.01	MsG0380013579.01	0.852829	3.569836e-61	7.556678e-58
MsG0180006046.01	MsG0380013579.01	0.806755	7.050674e-50	3.858050e-47
MsG0180006155.01	MsG0380013579.01	0.823885	1.088368e-53	9.491053e-51
MsG0280006305.01	MsG0380013579.01	0.829490	4.998709e-55	5.123795e-52
MsG0280006368.01	MsG0380013579.01	0.825343	4.935345e-54	4.486373e-51
MsG0280010633.01	MsG0380013579.01	0.807531	4.829302e-50	2.696364e-47
MsG0280011065.01	MsG0380013579.01	0.841907	3.574741e-58	5.329892e-55
MsG0280011141.01	MsG0380013579.01	0.803738	3.020674e-49	1.529724e-46
MsG0380011614.01	MsG0380013579.01	0.821471	3.966605e-53	3.229984e-50
MsG0380011927.01	MsG0380013579.01	0.802257	6.113704e-49	2.981023e-46
MsG0380012073.01	MsG0380013579.01	0.830600	2.681315e-55	2.838373e-52
MsG0380012869.01	MsG0380013579.01	0.804250	2.363917e-49	1.212902e-46
MsG0380013579.01	MsG0380013641.01	0.824617	7.326230e-54	6.523660e-51
MsG0380013579.01	MsG0380014175.01	0.824253	8.921764e-54	7.860495e-51
MsG0380013579.01	MsG0380014330.01	0.816459	5.471573e-52	3.879018e-49
MsG0380013579.01	MsG0380014489.01	0.816820	4.540146e-52	3.250880e-49
MsG0380013579.01	MsG0380014539.01	0.819930	8.967126e-53	6.996058e-50
MsG0380013579.01	MsG0380014541.01	0.829604	4.690929e-55	4.824447e-52
MsG0380013579.01	MsG0380014576.01	0.836590	8.560245e-57	1.083641e-53
MsG0380013579.01	MsG0380014778.01	0.813624	2.329432e-51	1.528942e-48
MsG0380013579.01	MsG0380014885.01	0.845121	4.947273e-59	8.160558e-56
MsG0380013579.01	MsG0380014908.01	0.810185	1.307078e-50	7.826312e-48
MsG0380013579.01	MsG0380015512.01	0.838926	2.151516e-57	2.924868e-54
MsG0380013579.01	MsG0380015607.01	0.818372	2.028272e-52	1.515627e-49
MsG0380013579.01	MsG0380015818.01	0.804637	1.963086e-49	1.017371e-46
MsG0380013579.01	MsG0380016005.01	0.815660	8.250613e-52	5.723293e-49
MsG0380013579.01	MsG0380016055.01	0.800682	1.285327e-48	6.021825e-46
MsG0380013579.01	MsG0380016483.01	0.811606	6.435862e-51	4.001379e-48
MsG0380013579.01	MsG0380016513.01	0.844627	6.725002e-59	1.092179e-55
MsG0380013579.01	MsG0380016604.01	0.846255	2.436226e-59	4.168273e-56
MsG0380013579.01	MsG0380016752.01	0.805325	1.409893e-49	7.437390e-47
MsG0380013579.01	MsG0380016985.01	0.804999	1.649893e-49	8.630817e-47
MsG0380013579.01	MsG0380017210.01	0.804062	2.586923e-49	1.321073e-46
MsG0380013579.01	MsG0380017279.01	0.807204	5.665680e-50	3.136579e-47
MsG0380013579.01	MsG0380017431.01	0.801617	8.272603e-49	3.968486e-46
MsG0380013579.01	MsG0380017476.01	0.865672	4.982411e-65	1.634850e-61
MsG0380013579.01	MsG0380017511.01	0.811673	6.222659e-51	3.875579e-48
MsG0380013579.01	MsG0380017556.01	0.829561	4.804516e-55	4.934742e-52
MsG0380013579.01	MsG0380017719.01	0.847728	9.624627e-60	1.726640e-56
MsG0380013579.01	MsG0380017797.01	0.881517	2.247478e-70	1.320820e-66
MsG0380013579.01	MsG0380018033.01	0.837035	6.590126e-57	8.455791e-54
MsG0380013579.01	MsG0480018235.01	0.846680	1.864936e-59	3.235569e-56
MsG0380013579.01	MsG0480018292.01	0.831758	1.392432e-55	1.525610e-52
MsG0380013579.01	MsG0480018335.01	0.824013	1.015921e-53	8.890041e-51
MsG0380013579.01	MsG0480018462.01	0.847328	1.239388e-59	2.194998e-56
MsG0380013579.01	MsG0480018477.01	0.858583	7.458107e-63	1.912564e-59
MsG0380013579.01	MsG0480018479.01	0.837444	5.180052e-57	6.730042e-54
MsG0380013579.01	MsG0480018894.01	0.807479	4.954288e-50	2.762416e-47
MsG0380013579.01	MsG0480019404.01	0.843835	1.097611e-58	1.738862e-55
MsG0380013579.01	MsG0480019879.01	0.821191	4.603859e-53	3.720054e-50
MsG0380013579.01	MsG0480020331.01	0.846560	2.011799e-59	3.476465e-56
MsG0380013579.01	MsG0480020591.01	0.802035	6.789923e-49	3.292061e-46
MsG0380013579.01	MsG0480020675.01	0.810343	1.208113e-50	7.264044e-48
MsG0380013579.01	MsG0480020780.01	0.819060	1.415824e-52	1.078193e-49
MsG0380013579.01	MsG0480020917.01	0.801369	9.300203e-49	4.433848e-46
MsG0380013579.01	MsG0480021432.01	0.838872	2.221649e-57	3.015346e-54
MsG0380013579.01	MsG0480021735.01	0.826330	2.878693e-54	2.691342e-51
MsG0380013579.01	MsG0480021832.01	0.826196	3.096890e-54	2.884501e-51
MsG0380013579.01	MsG0480022223.01	0.815470	9.093826e-52	6.275750e-49
MsG0380013579.01	MsG0480022228.01	0.827821	1.266018e-54	1.235842e-51
MsG0380013579.01	MsG0480022292.01	0.832281	1.033669e-55	1.149856e-52
MsG0380013579.01	MsG0480022614.01	0.806868	6.672591e-50	3.661994e-47
MsG0380013579.01	MsG0480022672.01	0.818345	2.057489e-52	1.536272e-49
MsG0380013579.01	MsG0480022678.01	0.855837	4.824133e-62	1.128609e-58
MsG0380013579.01	MsG0480022696.01	0.842515	2.467574e-58	3.750486e-55
MsG0380013579.01	MsG0480022717.01	0.811450	6.957891e-51	4.308442e-48
MsG0380013579.01	MsG0480022855.01	0.801316	9.535235e-49	4.539770e-46
MsG0380013579.01	MsG0480022960.01	0.844795	6.060377e-59	9.895402e-56
MsG0380013579.01	MsG0480023055.01	0.814932	1.197407e-51	8.141995e-49
MsG0380013579.01	MsG0480023149.01	0.802003	6.895448e-49	3.340425e-46
MsG0380013579.01	MsG0480023221.01	0.815467	9.106010e-52	6.283576e-49
MsG0380013579.01	MsG0480023240.01	0.856771	2.567986e-62	6.196097e-59
MsG0380013579.01	MsG0480023272.01	0.804881	1.745559e-49	9.104672e-47
MsG0380013579.01	MsG0480023387.01	0.818215	2.201864e-52	1.638019e-49
MsG0380013579.01	MsG0480023412.01	0.807911	4.009832e-50	2.261014e-47
MsG0380013579.01	MsG0480023415.01	0.817171	3.786917e-52	2.737769e-49
MsG0380013579.01	MsG0480023447.01	0.842520	2.458937e-58	3.738102e-55
MsG0380013579.01	MsG0480023559.01	0.844913	5.632198e-59	9.229523e-56
MsG0380013579.01	MsG0480023600.01	0.808263	3.374186e-50	1.920563e-47
MsG0380013579.01	MsG0580024191.01	0.800282	1.550574e-48	7.191579e-46
MsG0380013579.01	MsG0580024339.01	0.861215	1.199354e-63	3.367896e-60
MsG0380013579.01	MsG0580024409.01	0.807752	4.335477e-50	2.434609e-47
MsG0380013579.01	MsG0580024536.01	0.821766	3.390937e-53	2.784320e-50
MsG0380013579.01	MsG0580024727.01	0.831626	1.500197e-55	1.637144e-52
MsG0380013579.01	MsG0580024819.01	0.868445	6.495248e-66	2.349786e-62
MsG0380013579.01	MsG0580025651.01	0.831523	1.590750e-55	1.730651e-52
MsG0380013579.01	MsG0580025903.01	0.822422	2.388865e-53	1.998705e-50
MsG0380013579.01	MsG0580025986.01	0.812037	5.185765e-51	3.261418e-48
MsG0380013579.01	MsG0580026059.01	0.807665	4.524653e-50	2.534997e-47
MsG0380013579.01	MsG0580026157.01	0.832343	9.978524e-56	1.112082e-52
MsG0380013579.01	MsG0580026225.01	0.829855	4.075567e-55	4.222958e-52
MsG0380013579.01	MsG0580026226.01	0.832008	1.207513e-55	1.332711e-52
MsG0380013579.01	MsG0580026485.01	0.817607	3.021315e-52	2.210425e-49
MsG0380013579.01	MsG0580028094.01	0.841517	4.528806e-58	6.671102e-55
MsG0380013579.01	MsG0580028346.01	0.801937	7.113142e-49	3.440112e-46
MsG0380013579.01	MsG0580028597.01	0.822462	2.338078e-53	1.958356e-50
MsG0380013579.01	MsG0580029231.01	0.803385	3.574742e-49	1.793922e-46
MsG0380013579.01	MsG0580029258.01	0.810897	9.173128e-51	5.597870e-48
MsG0380013579.01	MsG0580029283.01	0.817693	2.889341e-52	2.118920e-49
MsG0380013579.01	MsG0580029658.01	0.804560	2.037225e-49	1.053695e-46
MsG0380013579.01	MsG0580029801.01	0.824146	9.451205e-54	8.302383e-51
MsG0380013579.01	MsG0580030003.01	0.853041	3.105820e-61	6.621535e-58
MsG0380013579.01	MsG0680030865.01	0.801656	8.124786e-49	3.901358e-46
MsG0380013579.01	MsG0680031063.01	0.812916	3.332365e-51	2.145537e-48
MsG0380013579.01	MsG0680031133.01	0.817906	2.586507e-52	1.907868e-49
MsG0380013579.01	MsG0680031301.01	0.841354	4.998743e-58	7.325496e-55
MsG0380013579.01	MsG0680031507.01	0.816019	6.860437e-52	4.805954e-49
MsG0380013579.01	MsG0680031628.01	0.818564	1.835568e-52	1.378739e-49
MsG0380013579.01	MsG0680031654.01	0.833881	4.132562e-56	4.823112e-53
MsG0380013579.01	MsG0680031699.01	0.853113	2.961735e-61	6.329107e-58
MsG0380013579.01	MsG0680031964.01	0.825902	3.638444e-54	3.360735e-51
MsG0380013579.01	MsG0680032075.01	0.821131	4.752272e-53	3.833497e-50
MsG0380013579.01	MsG0680034061.01	0.825049	5.792902e-54	5.222370e-51
MsG0380013579.01	MsG0680034445.01	0.806642	7.448085e-50	4.063562e-47
MsG0380013579.01	MsG0680034757.01	0.801236	9.903288e-49	4.705511e-46
MsG0380013579.01	MsG0680035306.01	0.863495	2.390448e-64	7.260677e-61
MsG0380013579.01	MsG0680035476.01	0.822076	2.874981e-53	2.381455e-50
MsG0380013579.01	MsG0680035574.01	0.825343	4.936196e-54	4.487128e-51
MsG0380013579.01	MsG0680035577.01	0.857049	2.126511e-62	5.179872e-59
MsG0380013579.01	MsG0680035888.01	0.850372	1.771586e-60	3.462633e-57
MsG0380013579.01	MsG0780036078.01	0.813743	2.193074e-51	1.444033e-48
MsG0380013579.01	MsG0780036240.01	0.848402	6.272319e-60	1.149761e-56
MsG0380013579.01	MsG0780037240.01	0.833811	4.303164e-56	5.011691e-53
MsG0380013579.01	MsG0780037755.01	0.824257	8.901088e-54	7.843153e-51
MsG0380013579.01	MsG0780038400.01	0.820362	7.138859e-53	5.636706e-50
MsG0380013579.01	MsG0780038565.01	0.829984	3.791332e-55	3.942541e-52
MsG0380013579.01	MsG0780038630.01	0.808674	2.757545e-50	1.586400e-47
MsG0380013579.01	MsG0780039340.01	0.823213	1.563397e-53	1.337576e-50
MsG0380013579.01	MsG0780039570.01	0.851450	8.804613e-61	1.782824e-57
MsG0380013579.01	MsG0780039587.01	0.814955	1.183685e-51	8.053736e-49
MsG0380013579.01	MsG0780039713.01	0.804255	2.358141e-49	1.210107e-46
MsG0380013579.01	MsG0780039717.01	0.810503	1.116202e-50	6.739809e-48
MsG0380013579.01	MsG0780039845.01	0.808670	2.763608e-50	1.589709e-47
MsG0380013579.01	MsG0780039943.01	0.805848	1.094760e-49	5.853504e-47
MsG0380013579.01	MsG0780040110.01	0.807866	4.101019e-50	2.309702e-47
MsG0380013579.01	MsG0780040125.01	0.821153	4.697116e-53	3.791262e-50
MsG0380013579.01	MsG0780040182.01	0.806268	8.933799e-50	4.828266e-47
MsG0380013579.01	MsG0780040208.01	0.827696	1.356686e-54	1.319526e-51
MsG0380013579.01	MsG0780040312.01	0.826853	2.160049e-54	2.049880e-51
MsG0380013579.01	MsG0780040411.01	0.824841	6.487197e-54	5.813394e-51
MsG0380013579.01	MsG0780040519.01	0.822390	2.430783e-53	2.031902e-50
MsG0380013579.01	MsG0780040569.01	0.825680	4.107967e-54	3.770263e-51
MsG0380013579.01	MsG0780040845.01	0.862508	4.824098e-64	1.416318e-60
MsG0380013579.01	MsG0780041193.01	0.807320	5.354022e-50	2.973080e-47
MsG0380013579.01	MsG0780041223.01	0.839890	1.208964e-57	1.692943e-54
MsG0380013579.01	MsG0780041268.01	0.819144	1.355371e-52	1.034447e-49
MsG0380013579.01	MsG0780041295.01	0.817989	2.477356e-52	1.831562e-49
MsG0380013579.01	MsG0780041392.01	0.809564	1.778026e-50	1.047460e-47
MsG0380013579.01	MsG0780041423.01	0.856957	2.264293e-62	5.498073e-59
MsG0380013579.01	MsG0780041490.01	0.834851	2.360131e-56	2.835541e-53
MsG0380013579.01	MsG0780041796.01	0.816448	5.502237e-52	3.899549e-49
MsG0380013579.01	MsG0880042033.01	0.821948	3.077852e-53	2.540283e-50
MsG0380013579.01	MsG0880042206.01	0.844940	5.536691e-59	9.081377e-56
MsG0380013579.01	MsG0880042207.01	0.820614	6.250422e-53	4.969468e-50
MsG0380013579.01	MsG0880042324.01	0.801259	9.796255e-49	4.657324e-46
MsG0380013579.01	MsG0880042399.01	-0.802823	4.671553e-49	2.311124e-46
MsG0380013579.01	MsG0880042519.01	0.804820	1.797725e-49	9.361681e-47
MsG0380013579.01	MsG0880042552.01	0.806966	6.362174e-50	3.500391e-47
MsG0380013579.01	MsG0880042760.01	0.844892	5.704060e-59	9.341138e-56
MsG0380013579.01	MsG0880042829.01	0.801016	1.098442e-48	5.190619e-46
MsG0380013579.01	MsG0880042891.01	0.826600	2.481929e-54	2.338156e-51
MsG0380013579.01	MsG0880042991.01	0.816532	5.269565e-52	3.743422e-49
MsG0380013579.01	MsG0880043162.01	0.821499	3.909183e-53	3.185649e-50
MsG0380013579.01	MsG0880043194.01	0.801079	1.066278e-48	5.046496e-46
MsG0380013579.01	MsG0880043341.01	0.807335	5.316555e-50	2.953324e-47
MsG0380013579.01	MsG0880043532.01	0.856749	2.605998e-62	6.282751e-59
MsG0380013579.01	MsG0880043592.01	0.824608	7.359758e-54	6.552018e-51
MsG0380013579.01	MsG0880044975.01	0.822767	1.986159e-53	1.678166e-50
MsG0380013579.01	MsG0880044990.01	0.815323	9.803316e-52	6.737695e-49
MsG0380013579.01	MsG0880045145.01	0.826824	2.194066e-54	2.080458e-51
MsG0380013579.01	MsG0880045165.01	0.824828	6.533212e-54	5.852632e-51
MsG0380013579.01	MsG0880045393.01	0.812631	3.847376e-51	2.458722e-48
MsG0380013579.01	MsG0880045619.01	0.838672	2.502940e-57	3.376381e-54
MsG0380013579.01	MsG0880045656.01	0.877941	4.194502e-69	2.149622e-65
MsG0380013579.01	MsG0880045684.01	0.804793	1.821035e-49	9.476237e-47
MsG0380013579.01	MsG0880045705.01	-0.812205	4.766888e-51	3.011907e-48
MsG0380013579.01	MsG0880045754.01	0.804189	2.434320e-49	1.247106e-46
MsG0380013579.01	MsG0880045951.01	0.833162	6.248106e-56	7.136410e-53
MsG0380013579.01	MsG0880046027.01	0.815842	7.514765e-52	5.238443e-49
MsG0380013579.01	MsG0880046068.01	0.834568	2.780759e-56	3.313062e-53
MsG0380013579.01	MsG0880046074.01	0.858125	1.021028e-62	2.578590e-59
MsG0380013579.01	MsG0880046113.01	0.815841	7.519689e-52	5.241719e-49
MsG0380013579.01	MsG0880046177.01	0.844703	6.415797e-59	1.044413e-55
MsG0380013579.01	MsG0880046450.01	0.821766	3.390805e-53	2.784215e-50
MsG0380013579.01	MsG0880046684.01	0.826541	2.562992e-54	2.410602e-51
MsG0380013579.01	MsG0880046901.01	0.825023	5.875219e-54	5.292692e-51
MsG0380013579.01	MsG0880046933.01	0.820725	5.892755e-53	4.699799e-50
MsG0380013579.01	MsG0880047212.01	0.800314	1.527392e-48	7.089941e-46
MsG0380013579.01	MsG0880047391.01	0.822951	1.799809e-53	1.528540e-50
MsG0380013579.01	MsG0880047428.01	0.830480	2.868263e-55	3.025455e-52
MsG0380013579.01	MsG0880047470.01	0.857785	1.288562e-62	3.217122e-59
MsG0380013579.01	MsG0880047607.01	0.823879	1.091746e-53	9.518821e-51
MsG0280006759.01	MsG0380013579.01	0.835098	2.045233e-56	2.475305e-53
MsG0280006892.01	MsG0380013579.01	0.823869	1.098154e-53	9.571696e-51
MsG0280006993.01	MsG0380013579.01	0.802140	6.461774e-49	3.141296e-46
MsG0280007109.01	MsG0380013579.01	0.809197	2.131158e-50	1.243298e-47
MsG0280007161.01	MsG0380013579.01	0.850713	1.421615e-60	2.809750e-57
MsG0280007321.01	MsG0380013579.01	0.834728	2.534627e-56	3.033549e-53
MsG0280007440.01	MsG0380013579.01	0.808276	3.353129e-50	1.909207e-47
MsG0280007441.01	MsG0380013579.01	0.807200	5.676263e-50	3.142131e-47
MsG0280007527.01	MsG0380013579.01	0.817426	3.318491e-52	2.415991e-49
MsG0280007710.01	MsG0380013579.01	0.804143	2.488478e-49	1.273384e-46
MsG0280007790.01	MsG0380013579.01	0.806813	6.854371e-50	3.756465e-47
MsG0280007847.01	MsG0380013579.01	0.821717	3.480760e-53	2.854155e-50
MsG0280008118.01	MsG0380013579.01	0.815646	8.310773e-52	5.762909e-49
MsG0280008134.01	MsG0380013579.01	0.807350	5.275980e-50	2.931940e-47
MsG0280008234.01	MsG0380013579.01	0.812795	3.542373e-51	2.273373e-48
MsG0280008286.01	MsG0380013579.01	0.829930	3.907640e-55	4.057108e-52
MsG0280008502.01	MsG0380013579.01	0.805315	1.416850e-49	7.472195e-47
MsG0280008614.01	MsG0380013579.01	0.825600	4.290682e-54	3.929093e-51
MsG0280008909.01	MsG0380013579.01	0.879959	8.136314e-70	4.501632e-66
MsG0280009141.01	MsG0380013579.01	0.813700	2.240924e-51	1.473888e-48
MsG0280009575.01	MsG0380013579.01	0.834682	2.601979e-56	3.110099e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013579.01.T01	MTR_3g046760	72.115	104	7	1	1	82	52	155	6.61e-34	116
MsG0380013579.01.T01	MTR_4g096780	45.918	98	30	1	8	82	54	151	5.70e-21	83.6
MsG0380013579.01.T01	MTR_4g096780	45.918	98	30	1	8	82	54	151	9.83e-21	84.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013579.01.T01	AT2G30890	42.857	105	37	1	1	82	45	149	3.55e-24	91.7
MsG0380013579.01.T01	AT4G18260	45.918	98	30	1	8	82	60	157	1.01e-22	88.6

Find 20 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGATTAGGGGTTGCACTTTA+TGG	0.214906	3:+41090635	MsG0380013579.01.T01:CDS
CTTTCTCCTTTGGGCTTCAA+TGG	0.240506	3:+41089471	MsG0380013579.01.T01:CDS
ACAATAATCATCAAAGATTA+GGG	0.240819	3:+41090621	MsG0380013579.01.T01:CDS
CATTACATGGCTTTCTCCTT+TGG	0.245393	3:+41089461	MsG0380013579.01.T01:CDS
TTGCACTTTATGGTGTTATC+TGG	0.283526	3:+41090645	MsG0380013579.01.T01:CDS
ATTACATGGCTTTCTCCTTT+GGG	0.302177	3:+41089462	MsG0380013579.01.T01:CDS
AACAATAATCATCAAAGATT+AGG	0.323426	3:+41090620	MsG0380013579.01.T01:CDS
ATGGGATTCTTGATGCCTAT+TGG	0.346223	3:+41089490	MsG0380013579.01.T01:CDS
GTAATTTCAAATTGAAGTCT+TGG	0.346934	3:-41089439	None:intergenic
CAATTTGAAATTACATTACA+TGG	0.377562	3:+41089448	MsG0380013579.01.T01:CDS
TTTCTCCTTTGGGCTTCAAT+GGG	0.382298	3:+41089472	MsG0380013579.01.T01:CDS
GCTGTACTTCTTGCCACAGC+AGG	0.491683	3:+41090560	MsG0380013579.01.T01:CDS
TTTAGAGTTTCTGTTAAAGC+AGG	0.511706	3:+41090532	MsG0380013579.01.T01:intron
ATCTGGCTGCAAGTCCTAGT+TGG	0.526574	3:+41090662	MsG0380013579.01.T01:CDS
TTTGATGATTATTGTTGAAG+AGG	0.545214	3:-41090613	None:intergenic
TGACATGATTGCTCCTGCTG+TGG	0.597152	3:-41090573	None:intergenic
AGAATCCCATTGAAGCCCAA+AGG	0.642048	3:-41089477	None:intergenic
TTGGTATCTTTCGACCACGA+AGG	0.667973	3:+41090681	MsG0380013579.01.T01:CDS
GTGGTCGAAAGATACCAACT+AGG	0.688430	3:-41090676	None:intergenic
CAATAATCATCAAAGATTAG+GGG	0.720596	3:+41090622	MsG0380013579.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAAATGTTTTAAAAAAAGT+CGG	-	Chr3:41090474-41090493	None:intergenic	10.0%
!!	GAATAAATTAACTAAAAATG+TGG	-	Chr3:41090152-41090171	None:intergenic	15.0%
!!!	TAATGCATAAGTTTTAAAAA+TGG	+	Chr3:41089830-41089849	MsG0380013579.01.T01:intron	15.0%
!!!	TATTCATTCTATTACTTTTA+AGG	+	Chr3:41089874-41089893	MsG0380013579.01.T01:intron	15.0%
!!	AACAATAATCATCAAAGATT+AGG	+	Chr3:41090620-41090639	MsG0380013579.01.T01:CDS	20.0%
!!	AATTAGATTATCAAATAGAG+AGG	+	Chr3:41089522-41089541	MsG0380013579.01.T01:intron	20.0%
!!	AATTATAGTCTTTGTCAAAA+AGG	-	Chr3:41090223-41090242	None:intergenic	20.0%
!!	ACAATAATCATCAAAGATTA+GGG	+	Chr3:41090621-41090640	MsG0380013579.01.T01:CDS	20.0%
!!	CTAATAAGATCATGTAATAT+TGG	+	Chr3:41090188-41090207	MsG0380013579.01.T01:intron	20.0%
!!	TACATAAATAGGTCAATTAA+AGG	-	Chr3:41089977-41089996	None:intergenic	20.0%
!!!	CAATTTGAAATTACATTACA+TGG	+	Chr3:41089448-41089467	MsG0380013579.01.T01:CDS	20.0%
!!!	TCTTTTTGATGATAATATGA+AGG	+	Chr3:41090283-41090302	MsG0380013579.01.T01:intron	20.0%
!	AAAATATTGACAGATCCAAA+TGG	-	Chr3:41090042-41090061	None:intergenic	25.0%
!	AAATATTGACAGATCCAAAT+GGG	-	Chr3:41090041-41090060	None:intergenic	25.0%
!	AGACTATAATTGATACTTTG+AGG	+	Chr3:41090232-41090251	MsG0380013579.01.T01:intron	25.0%
!	CAATAATCATCAAAGATTAG+GGG	+	Chr3:41090622-41090641	MsG0380013579.01.T01:CDS	25.0%
!	CTATTTATGTAATAAAGCAG+TGG	+	Chr3:41089986-41090005	MsG0380013579.01.T01:intron	25.0%
!	GTAATTTCAAATTGAAGTCT+TGG	-	Chr3:41089442-41089461	None:intergenic	25.0%
!!	CACTGCTTTATTACATAAAT+AGG	-	Chr3:41089988-41090007	None:intergenic	25.0%
!!	CTATGTTCATACAATTTTTC+AGG	+	Chr3:41089573-41089592	MsG0380013579.01.T01:intron	25.0%
!!	TTTGATGATTATTGTTGAAG+AGG	-	Chr3:41090616-41090635	None:intergenic	25.0%
!!!	GAATTTATTTTGTATTCTGC+TGG	+	Chr3:41089647-41089666	MsG0380013579.01.T01:intron	25.0%
	AATAAAATTCTAAGCCACCT+TGG	-	Chr3:41089553-41089572	None:intergenic	30.0%
	AATATTGACAGATCCAAATG+GGG	-	Chr3:41090040-41090059	None:intergenic	30.0%
	ATAAAGATCAGTTGTCACAT+TGG	+	Chr3:41090072-41090091	MsG0380013579.01.T01:intron	30.0%
	CTAATTGCAAGTATACCAAT+AGG	-	Chr3:41089508-41089527	None:intergenic	30.0%
	TGACACGATACTAACATATA+TGG	-	Chr3:41090398-41090417	None:intergenic	30.0%
!	CATTGGTTAACCTTTAATGA+TGG	+	Chr3:41090089-41090108	MsG0380013579.01.T01:intron	30.0%
!	TTTAGAGTTTCTGTTAAAGC+AGG	+	Chr3:41090532-41090551	MsG0380013579.01.T01:intron	30.0%
	ACCTTTAATGATGGCATGTA+AGG	+	Chr3:41090098-41090117	MsG0380013579.01.T01:intron	35.0%
	ATTACATGGCTTTCTCCTTT+GGG	+	Chr3:41089462-41089481	MsG0380013579.01.T01:CDS	35.0%
	GACCACAGAATATCTATCTA+AGG	-	Chr3:41089945-41089964	None:intergenic	35.0%
	TCCTTACATGCCATCATTAA+AGG	-	Chr3:41090102-41090121	None:intergenic	35.0%
	TGCCTTAGATAGATATTCTG+TGG	+	Chr3:41089940-41089959	MsG0380013579.01.T01:intron	35.0%
!	TAAAGCAGTGGTGAAAGTTT+TGG	+	Chr3:41089998-41090017	MsG0380013579.01.T01:intron	35.0%
!!	AATTTTCTTGCTGTCTTCAC+AGG	-	Chr3:41090337-41090356	None:intergenic	35.0%
!!	TTGCACTTTATGGTGTTATC+TGG	+	Chr3:41090645-41090664	MsG0380013579.01.T01:CDS	35.0%
!!!	TGGCTGCTTTTCTTTTTACT+TGG	+	Chr3:41089667-41089686	MsG0380013579.01.T01:intron	35.0%
	AGATTAGGGGTTGCACTTTA+TGG	+	Chr3:41090635-41090654	MsG0380013579.01.T01:CDS	40.0%
	ATGGGATTCTTGATGCCTAT+TGG	+	Chr3:41089490-41089509	MsG0380013579.01.T01:CDS	40.0%
	CAAATAGAGAGGAGAATCCA+AGG	+	Chr3:41089533-41089552	MsG0380013579.01.T01:intron	40.0%
	CATTACATGGCTTTCTCCTT+TGG	+	Chr3:41089461-41089480	MsG0380013579.01.T01:CDS	40.0%
	TTTCTCCTTTGGGCTTCAAT+GGG	+	Chr3:41089472-41089491	MsG0380013579.01.T01:CDS	40.0%
!!	GTGGTGAAAGTTTTGGTAGA+TGG	+	Chr3:41090005-41090024	MsG0380013579.01.T01:intron	40.0%
!!	GTTTTGGTAGATGGTTACTC+TGG	+	Chr3:41090014-41090033	MsG0380013579.01.T01:intron	40.0%
	AGAATCCCATTGAAGCCCAA+AGG	-	Chr3:41089480-41089499	None:intergenic	45.0%
	ATAGAGAGGAGAATCCAAGG+TGG	+	Chr3:41089536-41089555	MsG0380013579.01.T01:intron	45.0%
	CTTTCTCCTTTGGGCTTCAA+TGG	+	Chr3:41089471-41089490	MsG0380013579.01.T01:CDS	45.0%
	GTGGTCGAAAGATACCAACT+AGG	-	Chr3:41090679-41090698	None:intergenic	45.0%
	TTGGTATCTTTCGACCACGA+AGG	+	Chr3:41090681-41090700	MsG0380013579.01.T01:CDS	45.0%
!!	CTTAAATAATTAAATATAAT+TGG	-	Chr3:41089696-41089715	None:intergenic	5.0%
!!!	AATTAGTAATTATTTAAAAT+AGG	+	Chr3:41089738-41089757	MsG0380013579.01.T01:intron	5.0%
	ATCTGGCTGCAAGTCCTAGT+TGG	+	Chr3:41090662-41090681	MsG0380013579.01.T01:CDS	50.0%
	ATGGTTACTCTGGCCCCATT+TGG	+	Chr3:41090024-41090043	MsG0380013579.01.T01:intron	50.0%
	TGACATGATTGCTCCTGCTG+TGG	-	Chr3:41090576-41090595	None:intergenic	50.0%
	GCTGTACTTCTTGCCACAGC+AGG	+	Chr3:41090560-41090579	MsG0380013579.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	41089433	41090706	41089433	ID=MsG0380013579.01;Name=MsG0380013579.01
Chr3	mRNA	41089433	41090706	41089433	ID=MsG0380013579.01.T01;Parent=MsG0380013579.01;Name=MsG0380013579.01.T01;_AED=0.49;_eAED=0.52;_QI=0\|0\|0\|1\|0\|0\|2\|0\|82
Chr3	exon	41089433	41089511	41089433	ID=MsG0380013579.01.T01:exon:14655;Parent=MsG0380013579.01.T01
Chr3	exon	41090537	41090706	41090537	ID=MsG0380013579.01.T01:exon:14656;Parent=MsG0380013579.01.T01
Chr3	CDS	41089433	41089511	41089433	ID=MsG0380013579.01.T01:cds;Parent=MsG0380013579.01.T01
Chr3	CDS	41090537	41090706	41090537	ID=MsG0380013579.01.T01:cds;Parent=MsG0380013579.01.T01

Gene Sequence	>MsG0380013579.01.T01 ATGAGTCCAAGACTTCAATTTGAAATTACATTACATGGCTTTCTCCTTTGGGCTTCAATGGGATTCTTGATGCCTATTGAGTTTCTGTTAAAGCAGGTAGTTGCTGTACTTCTTGCCACAGCAGGAGCAATCATGTCAATAAAAAATTTCAACAACCTCTTCAACAATAATCATCAAAGATTAGGGGTTGCACTTTATGGTGTTATCTGGCTGCAAGTCCTAGTTGGTATCTTTCGACCACGAAGGTAA
Protein sequence	>MsG0380013579.01.T01 MSPRLQFEITLHGFLLWASMGFLMPIEFLLKQVVAVLLATAGAIMSIKNFNNLFNNNHQRLGVALYGVIWLQVLVGIFRPRR*