AlfalfaGEDB | MsG0380017797.01

M. sativa cultivar ZhongmuNo.1 / MsG0380017797.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048058.01	MsG0380017797.01	0.823217	1.559683e-53	1.334558e-50
MsG0080048383.01	MsG0380017797.01	0.812813	3.510443e-51	2.253939e-48
MsG0080048687.01	MsG0380017797.01	0.829495	4.987066e-55	5.112454e-52
MsG0180000001.01	MsG0380017797.01	0.809416	1.912775e-50	1.122434e-47
MsG0180000101.01	MsG0380017797.01	0.822474	2.324127e-53	1.947345e-50
MsG0180000144.01	MsG0380017797.01	0.835312	1.805277e-56	2.199559e-53
MsG0180000146.01	MsG0380017797.01	0.832929	7.139197e-56	8.097284e-53
MsG0180000155.01	MsG0380017797.01	0.827929	1.192077e-54	1.167422e-51
MsG0180000400.01	MsG0380017797.01	-0.800411	1.459507e-48	6.791429e-46
MsG0180000555.01	MsG0380017797.01	0.800506	1.395830e-48	6.510496e-46
MsG0180000741.01	MsG0380017797.01	0.803967	2.707714e-49	1.379323e-46
MsG0180000806.01	MsG0380017797.01	0.815232	1.027532e-51	7.044029e-49
MsG0180000836.01	MsG0380017797.01	0.810144	1.334009e-50	7.979268e-48
MsG0180001173.01	MsG0380017797.01	0.836417	9.471238e-57	1.192876e-53
MsG0180001235.01	MsG0380017797.01	0.804741	1.867354e-49	9.704450e-47
MsG0180001237.01	MsG0380017797.01	0.803656	3.141102e-49	1.587314e-46
MsG0180001294.01	MsG0380017797.01	0.816187	6.293622e-52	4.429067e-49
MsG0180001315.01	MsG0380017797.01	0.825511	4.503672e-54	4.113429e-51
MsG0180001599.01	MsG0380017797.01	0.838256	3.203280e-57	4.266275e-54
MsG0180001687.01	MsG0380017797.01	0.803520	3.351940e-49	1.688048e-46
MsG0180001911.01	MsG0380017797.01	0.821172	4.650482e-53	3.755624e-50
MsG0180001922.01	MsG0380017797.01	0.800596	1.338456e-48	6.257151e-46
MsG0180003181.01	MsG0380017797.01	0.832999	6.861607e-56	7.799330e-53
MsG0180003190.01	MsG0380017797.01	0.821518	3.869870e-53	3.155280e-50
MsG0180003303.01	MsG0380017797.01	0.864420	1.231531e-64	3.864536e-61
MsG0180003379.01	MsG0380017797.01	0.800105	1.684572e-48	7.777772e-46
MsG0180003444.01	MsG0380017797.01	0.801659	8.111011e-49	3.895134e-46
MsG0180003572.01	MsG0380017797.01	0.801482	8.820309e-49	4.216956e-46
MsG0180003744.01	MsG0380017797.01	0.870638	1.254086e-66	4.913138e-63
MsG0180003860.01	MsG0380017797.01	0.825076	5.707872e-54	5.149621e-51
MsG0180003984.01	MsG0380017797.01	0.821911	3.139425e-53	2.588478e-50
MsG0180004016.01	MsG0380017797.01	0.845700	3.447421e-59	5.794620e-56
MsG0180004050.01	MsG0380017797.01	0.825232	5.244597e-54	4.752596e-51
MsG0180004056.01	MsG0380017797.01	0.857671	1.392196e-62	3.463322e-59
MsG0180004128.01	MsG0380017797.01	0.810646	1.039501e-50	6.300854e-48
MsG0180004160.01	MsG0380017797.01	0.804927	1.707714e-49	8.917494e-47
MsG0180004252.01	MsG0380017797.01	0.849150	3.888760e-60	7.305381e-57
MsG0180004437.01	MsG0380017797.01	0.849950	2.326568e-60	4.485186e-57
MsG0180004444.01	MsG0380017797.01	0.827165	1.818565e-54	1.741755e-51
MsG0180004598.01	MsG0380017797.01	0.867232	1.592587e-65	5.519790e-62
MsG0180004645.01	MsG0380017797.01	0.858613	7.303077e-63	1.874902e-59
MsG0180004730.01	MsG0380017797.01	0.817983	2.484709e-52	1.836637e-49
MsG0180004767.01	MsG0380017797.01	0.828769	7.477304e-55	7.503401e-52
MsG0180004989.01	MsG0380017797.01	0.801306	9.582383e-49	4.561033e-46
MsG0180004991.01	MsG0380017797.01	0.817475	3.234403e-52	2.357996e-49
MsG0180005049.01	MsG0380017797.01	0.860413	2.101293e-63	5.739135e-60
MsG0180005337.01	MsG0380017797.01	0.803556	3.294982e-49	1.660939e-46
MsG0180005443.01	MsG0380017797.01	0.820992	5.116473e-53	4.111678e-50
MsG0180005451.01	MsG0380017797.01	0.847451	1.146705e-59	2.039120e-56
MsG0180005765.01	MsG0380017797.01	0.866770	2.235249e-65	7.623382e-62
MsG0180005949.01	MsG0380017797.01	0.815129	1.082913e-51	7.402809e-49
MsG0180005985.01	MsG0380017797.01	0.831344	1.760130e-55	1.904759e-52
MsG0180006050.01	MsG0380017797.01	0.821423	4.070852e-53	3.310530e-50
MsG0180006225.01	MsG0380017797.01	0.816994	4.151024e-52	2.986633e-49
MsG0280006305.01	MsG0380017797.01	0.826717	2.327646e-54	2.200243e-51
MsG0280006367.01	MsG0380017797.01	0.817794	2.741273e-52	2.015965e-49
MsG0280006368.01	MsG0380017797.01	0.835546	1.575304e-56	1.932538e-53
MsG0280010735.01	MsG0380017797.01	0.839919	1.188014e-57	1.665233e-54
MsG0280010901.01	MsG0380017797.01	0.805565	1.255512e-49	6.663800e-47
MsG0280011065.01	MsG0380017797.01	0.812210	4.754982e-51	3.004831e-48
MsG0280011075.01	MsG0380017797.01	0.839391	1.629995e-57	2.247881e-54
MsG0280011423.01	MsG0380017797.01	0.810366	1.194583e-50	7.187095e-48
MsG0380012458.01	MsG0380017797.01	0.802701	4.951856e-49	2.442009e-46
MsG0380013579.01	MsG0380017797.01	0.881517	2.247478e-70	1.320820e-66
MsG0380013641.01	MsG0380017797.01	0.836058	1.168505e-56	1.455853e-53
MsG0380014175.01	MsG0380017797.01	0.805756	1.144774e-49	6.106533e-47
MsG0380014489.01	MsG0380017797.01	0.824730	6.889736e-54	6.154758e-51
MsG0380014539.01	MsG0380017797.01	0.802860	4.592023e-49	2.273682e-46
MsG0380014541.01	MsG0380017797.01	0.844689	6.470429e-59	1.052880e-55
MsG0380014576.01	MsG0380017797.01	0.842172	3.041352e-58	4.572564e-55
MsG0380014579.01	MsG0380017797.01	0.833043	6.690542e-56	7.614882e-53
MsG0380014778.01	MsG0380017797.01	0.804469	2.127819e-49	1.097981e-46
MsG0380015436.01	MsG0380017797.01	0.808905	2.460938e-50	1.424400e-47
MsG0380015607.01	MsG0380017797.01	0.859452	4.095580e-63	1.082197e-59
MsG0380016005.01	MsG0380017797.01	0.816731	4.753385e-52	3.395248e-49
MsG0380016055.01	MsG0380017797.01	0.827178	1.805982e-54	1.730360e-51
MsG0380016513.01	MsG0380017797.01	0.846676	1.870218e-59	3.244244e-56
MsG0380016604.01	MsG0380017797.01	0.846166	2.576384e-59	4.395301e-56
MsG0380016941.01	MsG0380017797.01	0.811771	5.927256e-51	3.701358e-48
MsG0380016985.01	MsG0380017797.01	0.812062	5.122206e-51	3.223687e-48
MsG0380017210.01	MsG0380017797.01	0.825454	4.647928e-54	4.238142e-51
MsG0380017431.01	MsG0380017797.01	0.812233	4.700455e-51	2.972239e-48
MsG0380017433.01	MsG0380017797.01	0.802391	5.737796e-49	2.807394e-46
MsG0380017476.01	MsG0380017797.01	0.834723	2.541858e-56	3.041815e-53
MsG0380017719.01	MsG0380017797.01	0.841689	4.079696e-58	6.041113e-55
MsG0380017797.01	MsG0380018033.01	0.806492	8.011817e-50	4.354626e-47
MsG0380017797.01	MsG0480018235.01	0.828128	1.067818e-54	1.051857e-51
MsG0380017797.01	MsG0480018462.01	0.834988	2.179699e-56	2.629736e-53
MsG0380017797.01	MsG0480018477.01	0.806222	9.135904e-50	4.931648e-47
MsG0380017797.01	MsG0480018479.01	0.857839	1.241501e-62	3.105786e-59
MsG0380017797.01	MsG0480018846.01	0.804646	1.955277e-49	1.013556e-46
MsG0380017797.01	MsG0480019170.01	0.822744	2.010404e-53	1.697554e-50
MsG0380017797.01	MsG0480019404.01	0.812316	4.507426e-51	2.856587e-48
MsG0380017797.01	MsG0480019539.01	0.803604	3.220522e-49	1.625345e-46
MsG0380017797.01	MsG0480019642.01	0.825020	5.885837e-54	5.301705e-51
MsG0380017797.01	MsG0480020144.01	0.800856	1.184149e-48	5.572768e-46
MsG0380017797.01	MsG0480020331.01	0.821307	4.327915e-53	3.508250e-50
MsG0380017797.01	MsG0480020416.01	0.802021	6.836711e-49	3.313496e-46
MsG0380017797.01	MsG0480020675.01	0.835084	2.060824e-56	2.493255e-53
MsG0380017797.01	MsG0480020791.01	0.816454	5.483198e-52	3.886862e-49
MsG0380017797.01	MsG0480020829.01	0.837118	6.275407e-57	8.071643e-54
MsG0380017797.01	MsG0480020917.01	0.850441	1.694538e-60	3.319865e-57
MsG0380017797.01	MsG0480021216.01	0.821307	4.329363e-53	3.509344e-50
MsG0380017797.01	MsG0480021432.01	0.821513	3.880533e-53	3.163473e-50
MsG0380017797.01	MsG0480021735.01	0.819750	9.859507e-53	7.653575e-50
MsG0380017797.01	MsG0480022026.01	0.803188	3.926819e-49	1.960719e-46
MsG0380017797.01	MsG0480022104.01	0.810871	9.293812e-51	5.667488e-48
MsG0380017797.01	MsG0480022108.01	0.811357	7.289065e-51	4.502136e-48
MsG0380017797.01	MsG0480022228.01	0.823556	1.299737e-53	1.122821e-50
MsG0380017797.01	MsG0480022318.01	0.818283	2.125574e-52	1.584216e-49
MsG0380017797.01	MsG0480022464.01	0.818436	1.962529e-52	1.469089e-49
MsG0380017797.01	MsG0480022552.01	0.800661	1.298073e-48	6.078579e-46
MsG0380017797.01	MsG0480022672.01	0.808410	3.139778e-50	1.793945e-47
MsG0380017797.01	MsG0480022678.01	0.846824	1.703867e-59	2.969475e-56
MsG0380017797.01	MsG0480022719.01	0.817164	3.800203e-52	2.746823e-49
MsG0380017797.01	MsG0480023240.01	0.867133	1.712707e-65	5.914286e-62
MsG0380017797.01	MsG0480023387.01	0.822266	2.597276e-53	2.163285e-50
MsG0380017797.01	MsG0480023447.01	0.839847	1.240295e-57	1.734520e-54
MsG0380017797.01	MsG0480023841.01	-0.809857	1.538142e-50	9.131591e-48
MsG0380017797.01	MsG0580024191.01	0.816535	5.259983e-52	3.736963e-49
MsG0380017797.01	MsG0580024311.01	0.851189	1.043766e-60	2.095774e-57
MsG0380017797.01	MsG0580024339.01	0.876055	1.892583e-68	9.044407e-65
MsG0380017797.01	MsG0580024374.01	0.813160	2.945504e-51	1.908908e-48
MsG0380017797.01	MsG0580024409.01	0.840657	7.619622e-58	1.092727e-54
MsG0380017797.01	MsG0580024727.01	0.836899	7.138831e-57	9.122284e-54
MsG0380017797.01	MsG0580024819.01	0.861920	7.306669e-64	2.101118e-60
MsG0380017797.01	MsG0580024960.01	0.806349	8.589151e-50	4.651275e-47
MsG0380017797.01	MsG0580025903.01	0.827723	1.336795e-54	1.301268e-51
MsG0380017797.01	MsG0580028094.01	0.809955	1.464638e-50	8.718031e-48
MsG0380017797.01	MsG0580028526.01	0.807843	4.147047e-50	2.334261e-47
MsG0380017797.01	MsG0580028597.01	0.808112	3.634359e-50	2.060287e-47
MsG0380017797.01	MsG0580028664.01	-0.805271	1.446566e-49	7.620202e-47
MsG0380017797.01	MsG0580029208.01	0.802781	4.767149e-49	2.355786e-46
MsG0380017797.01	MsG0580029231.01	0.817611	3.014958e-52	2.206054e-49
MsG0380017797.01	MsG0580029371.01	0.828022	1.132728e-54	1.112379e-51
MsG0380017797.01	MsG0580029588.01	0.817167	3.794014e-52	2.742602e-49
MsG0380017797.01	MsG0580029658.01	0.835130	2.006840e-56	2.431300e-53
MsG0380017797.01	MsG0580029801.01	0.830634	2.629790e-55	2.786629e-52
MsG0380017797.01	MsG0580030003.01	0.836941	6.963936e-57	8.910252e-54
MsG0380017797.01	MsG0580030100.01	0.838361	3.010595e-57	4.022850e-54
MsG0380017797.01	MsG0680030321.01	0.828617	8.136524e-55	8.129618e-52
MsG0380017797.01	MsG0680030684.01	0.831780	1.374850e-55	1.507418e-52
MsG0380017797.01	MsG0680030841.01	0.816840	4.494751e-52	3.220171e-49
MsG0380017797.01	MsG0680030968.01	0.815428	9.293801e-52	6.405826e-49
MsG0380017797.01	MsG0680031063.01	0.840109	1.059815e-57	1.494448e-54
MsG0380017797.01	MsG0680031133.01	0.819654	1.036996e-52	8.028223e-50
MsG0380017797.01	MsG0680031301.01	0.834123	3.595448e-56	4.226453e-53
MsG0380017797.01	MsG0680031507.01	0.801615	8.284109e-49	3.973736e-46
MsG0380017797.01	MsG0680031654.01	0.841937	3.509041e-58	5.237024e-55
MsG0380017797.01	MsG0680031699.01	0.830036	3.681194e-55	3.833481e-52
MsG0380017797.01	MsG0680031964.01	0.816303	5.928116e-52	4.185339e-49
MsG0380017797.01	MsG0680034061.01	0.823484	1.351434e-53	1.165143e-50
MsG0380017797.01	MsG0680034445.01	0.807887	4.057470e-50	2.286451e-47
MsG0380017797.01	MsG0680034757.01	0.819412	1.177112e-52	9.051670e-50
MsG0380017797.01	MsG0680035306.01	0.815954	7.092507e-52	4.959598e-49
MsG0380017797.01	MsG0680035476.01	0.809272	2.053988e-50	1.200645e-47
MsG0380017797.01	MsG0680035574.01	0.806994	6.277399e-50	3.456191e-47
MsG0380017797.01	MsG0680035577.01	0.823850	1.109518e-53	9.665654e-51
MsG0380017797.01	MsG0680035876.01	0.809473	1.859596e-50	1.092823e-47
MsG0380017797.01	MsG0780036836.01	0.805536	1.273204e-49	6.752732e-47
MsG0380017797.01	MsG0780036845.01	0.832400	9.662077e-56	1.078747e-52
MsG0380017797.01	MsG0780037755.01	0.862593	4.540586e-64	1.336857e-60
MsG0380017797.01	MsG0780038565.01	0.808099	3.658330e-50	2.073152e-47
MsG0380017797.01	MsG0780038603.01	0.819246	1.284397e-52	9.831151e-50
MsG0380017797.01	MsG0780038630.01	0.817780	2.761017e-52	2.029697e-49
MsG0380017797.01	MsG0780039570.01	0.818683	1.725181e-52	1.300061e-49
MsG0380017797.01	MsG0780039587.01	0.860406	2.111681e-63	5.765723e-60
MsG0380017797.01	MsG0780039845.01	0.802928	4.444502e-49	2.204472e-46
MsG0380017797.01	MsG0780040125.01	0.831579	1.540926e-55	1.679340e-52
MsG0380017797.01	MsG0780040312.01	0.841530	4.493015e-58	6.621006e-55
MsG0380017797.01	MsG0780040411.01	0.807999	3.842358e-50	2.171704e-47
MsG0380017797.01	MsG0780040519.01	0.824613	7.341773e-54	6.536823e-51
MsG0380017797.01	MsG0780040569.01	0.819716	1.003585e-52	7.783186e-50
MsG0380017797.01	MsG0780040687.01	0.821620	3.664613e-53	2.996515e-50
MsG0380017797.01	MsG0780040742.01	0.837981	3.770769e-57	4.981215e-54
MsG0380017797.01	MsG0780040845.01	0.873858	1.061133e-67	4.674830e-64
MsG0380017797.01	MsG0780041183.01	0.808230	3.429722e-50	1.950394e-47
MsG0380017797.01	MsG0780041222.01	0.806680	7.312525e-50	3.993538e-47
MsG0380017797.01	MsG0780041268.01	0.827449	1.554794e-54	1.501575e-51
MsG0380017797.01	MsG0780041305.01	0.805863	1.087106e-49	5.814724e-47
MsG0380017797.01	MsG0780041310.01	0.802797	4.731613e-49	2.339134e-46
MsG0380017797.01	MsG0780041370.01	0.832200	1.082650e-55	1.201540e-52
MsG0380017797.01	MsG0780041371.01	0.826738	2.300479e-54	2.175950e-51
MsG0380017797.01	MsG0780041423.01	0.870613	1.278825e-66	5.005761e-63
MsG0380017797.01	MsG0780041469.01	0.803312	3.702448e-49	1.854465e-46
MsG0380017797.01	MsG0880042033.01	0.802742	4.855007e-49	2.396801e-46
MsG0380017797.01	MsG0880042206.01	0.885641	6.822210e-72	4.719863e-68
MsG0380017797.01	MsG0880042207.01	0.800482	1.411959e-48	6.581627e-46
MsG0380017797.01	MsG0880042399.01	-0.840964	6.332739e-58	9.168598e-55
MsG0380017797.01	MsG0880042547.01	0.806619	7.533304e-50	4.107659e-47
MsG0380017797.01	MsG0880042552.01	0.837373	5.401858e-57	7.002294e-54
MsG0380017797.01	MsG0880042760.01	0.852027	6.042926e-61	1.246226e-57
MsG0380017797.01	MsG0880042891.01	0.825128	5.550808e-54	5.015093e-51
MsG0380017797.01	MsG0880043162.01	0.834147	3.546732e-56	4.171762e-53
MsG0380017797.01	MsG0880043341.01	0.822082	2.865107e-53	2.373707e-50
MsG0380017797.01	MsG0880043532.01	0.839544	1.487091e-57	2.060147e-54
MsG0380017797.01	MsG0880043533.01	0.839635	1.407980e-57	1.956170e-54
MsG0380017797.01	MsG0880044075.01	0.835964	1.234810e-56	1.533956e-53
MsG0380017797.01	MsG0880044546.01	0.833994	3.872097e-56	4.534475e-53
MsG0380017797.01	MsG0880044990.01	0.810001	1.432040e-50	8.534240e-48
MsG0380017797.01	MsG0880045165.01	0.864068	1.585830e-64	4.914532e-61
MsG0380017797.01	MsG0880045393.01	0.823766	1.160415e-53	1.008598e-50
MsG0380017797.01	MsG0880045631.01	0.815488	9.010829e-52	6.221427e-49
MsG0380017797.01	MsG0880045656.01	0.860109	2.597537e-63	7.021435e-60
MsG0380017797.01	MsG0880045705.01	-0.830859	2.316633e-55	2.471157e-52
MsG0380017797.01	MsG0880045716.01	0.836014	1.198997e-56	1.491771e-53
MsG0380017797.01	MsG0880045914.01	0.812749	3.624829e-51	2.323698e-48
MsG0380017797.01	MsG0880045951.01	0.803228	3.853273e-49	1.925891e-46
MsG0380017797.01	MsG0880046047.01	0.833833	4.249494e-56	4.952477e-53
MsG0380017797.01	MsG0880046068.01	0.825037	5.830372e-54	5.254373e-51
MsG0380017797.01	MsG0880046074.01	0.814216	1.724540e-51	1.150175e-48
MsG0380017797.01	MsG0880046113.01	0.829248	5.725231e-55	5.827622e-52
MsG0380017797.01	MsG0880046163.01	0.800001	1.769044e-48	8.146021e-46
MsG0380017797.01	MsG0880046404.01	0.809146	2.185987e-50	1.273509e-47
MsG0380017797.01	MsG0880046450.01	0.804521	2.075311e-49	1.072288e-46
MsG0380017797.01	MsG0880046535.01	0.811990	5.310774e-51	3.335917e-48
MsG0380017797.01	MsG0880046684.01	0.842329	2.762950e-58	4.175077e-55
MsG0380017797.01	MsG0880046762.01	0.803671	3.118500e-49	1.576486e-46
MsG0380017797.01	MsG0880046901.01	0.838660	2.520871e-57	3.399415e-54
MsG0380017797.01	MsG0880047391.01	0.819737	9.923610e-53	7.700645e-50
MsG0380017797.01	MsG0880047428.01	0.806961	6.377886e-50	3.508601e-47
MsG0280006519.01	MsG0380017797.01	0.840674	7.542439e-58	1.082238e-54
MsG0280006728.01	MsG0380017797.01	0.813712	2.228038e-51	1.465915e-48
MsG0280006892.01	MsG0380017797.01	0.819429	1.166652e-52	8.975581e-50
MsG0280007048.01	MsG0380017797.01	0.802016	6.850990e-49	3.320076e-46
MsG0280007087.01	MsG0380017797.01	0.812592	3.924045e-51	2.505133e-48
MsG0280007161.01	MsG0380017797.01	0.810596	1.065523e-50	6.449986e-48
MsG0280007726.01	MsG0380017797.01	0.800069	1.713119e-48	7.902488e-46
MsG0280007790.01	MsG0380017797.01	0.837876	4.012958e-57	5.283756e-54
MsG0280007992.01	MsG0380017797.01	0.830767	2.440048e-55	2.595779e-52
MsG0280008134.01	MsG0380017797.01	0.823015	1.739187e-53	1.479787e-50
MsG0280008286.01	MsG0380017797.01	0.827137	1.846553e-54	1.767055e-51
MsG0280008502.01	MsG0380017797.01	0.813657	2.290673e-51	1.504832e-48
MsG0280008614.01	MsG0380017797.01	0.815156	1.068029e-51	7.306490e-49
MsG0280008758.01	MsG0380017797.01	0.813852	2.075394e-51	1.370584e-48
MsG0280008909.01	MsG0380017797.01	0.847639	1.017945e-59	1.821022e-56
MsG0280010022.01	MsG0380017797.01	0.804640	1.960199e-49	1.015955e-46
MsG0280010287.01	MsG0380017797.01	0.819904	9.092145e-53	7.088316e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 26 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTCAATTTGTTCCAGGATTT+TGG	0.134941	3:-100752492	MsG0380017797.01.T01:intron
TGTTTCTCCTTCTCTTGTTT+TGG	0.171794	3:-100752836	MsG0380017797.01.T01:CDS
TACAAATAATTACCATAAAA+TGG	0.225925	3:+100752374	None:intergenic
TACTTCCACGTGAAGGTTGC+TGG	0.335178	3:-100752889	MsG0380017797.01.T01:five_prime_UTR
AAAGTTTCAGCGCTTCCTTT+TGG	0.350105	3:+100753072	None:intergenic
TTAATTGAATAGAATGTAGA+TGG	0.357479	3:-100752919	MsG0380017797.01.T01:intron
CTTTCCAGAATTTAACTTTG+CGG	0.419957	3:+100753046	None:intergenic
TGTGCACTCTCAATCACAAT+TGG	0.466118	3:+100752417	None:intergenic
ATAAAATGGAAGCGGGGCCA+AGG	0.466360	3:+100752388	None:intergenic
TAAAATGGAAGCGGGGCCAA+GGG	0.471744	3:+100752389	None:intergenic
AATTACCATAAAATGGAAGC+GGG	0.497706	3:+100752381	None:intergenic
ACTTCCACGTGAAGGTTGCT+GGG	0.535786	3:-100752888	MsG0380017797.01.T01:five_prime_UTR
AGATCGTGGTGAAGTCCAAA+AGG	0.544645	3:-100753087	MsG0380017797.01.T01:five_prime_UTR
ACAATGCGTTGAGTTGAAGA+AGG	0.555886	3:-100753298	MsG0380017797.01.T01:five_prime_UTR
TTCTGGAAAGAAGACGCTGA+TGG	0.556197	3:-100753033	MsG0380017797.01.T01:five_prime_UTR
TAATTACCATAAAATGGAAG+CGG	0.561078	3:+100752380	None:intergenic
GAGAGTGCACAGATGCCCCT+TGG	0.565824	3:-100752405	MsG0380017797.01.T01:three_prime_UTR
AAAAGTTCCAAAACAAGAGA+AGG	0.567363	3:+100752829	None:intergenic
AAAATGGAAGCGGGGCCAAG+GGG	0.595531	3:+100752390	None:intergenic
CGTGTCATCAAAGATTACCT+TGG	0.619516	3:-100752793	MsG0380017797.01.T01:CDS
CATCAAGAAGCTCATAGACA+AGG	0.620398	3:+100752734	None:intergenic
TGTGCAAACAACATCTACTG+AGG	0.675679	3:-100752466	MsG0380017797.01.T01:CDS
ATAACCCAGCAACCTTCACG+TGG	0.682802	3:+100752884	None:intergenic
ATTACCATAAAATGGAAGCG+GGG	0.703729	3:+100752382	None:intergenic
TGTGAACTACTTCCACGTGA+AGG	0.725411	3:-100752896	MsG0380017797.01.T01:five_prime_UTR
AGTCTTCATTAAGAACACCA+AGG	0.729590	3:+100752776	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATTTGAATTTCATGTTAT+CGG	+	Chr3:100752570-100752589	None:intergenic	15.0%
!!	AAAAAAAACTACAAAAACAG+TGG	+	Chr3:100752685-100752704	None:intergenic	20.0%
!!	ATTGTAAGTACTTATTAACT+TGG	-	Chr3:100752979-100752998	MsG0380017797.01.T01:intron	20.0%
!!	TTAATTGAATAGAATGTAGA+TGG	-	Chr3:100752766-100752785	MsG0380017797.01.T01:CDS	20.0%
!	AAATAAATAAATGCAGATCG+TGG	-	Chr3:100752584-100752603	MsG0380017797.01.T01:intron	25.0%
	AAAAGTTCCAAAACAAGAGA+AGG	+	Chr3:100752859-100752878	None:intergenic	30.0%
!	CTTTCCAGAATTTAACTTTG+CGG	+	Chr3:100752642-100752661	None:intergenic	30.0%
!	TTTTCCGCAAAGTTAAATTC+TGG	-	Chr3:100752635-100752654	MsG0380017797.01.T01:intron	30.0%
	AGTCTTCATTAAGAACACCA+AGG	+	Chr3:100752912-100752931	None:intergenic	35.0%
	TGTATCTTGCTGCACTAAAT+GGG	+	Chr3:100753042-100753061	None:intergenic	35.0%
	TTTGCACATAACCAAAATCC+TGG	+	Chr3:100753207-100753226	None:intergenic	35.0%
!	AGTTCTTTTGCTTTCTCAAG+AGG	-	Chr3:100752447-100752466	MsG0380017797.01.T01:exon	35.0%
!!	GTCAATTTGTTCCAGGATTT+TGG	-	Chr3:100753193-100753212	MsG0380017797.01.T01:intron	35.0%
!!	TGTTTCTCCTTCTCTTGTTT+TGG	-	Chr3:100752849-100752868	MsG0380017797.01.T01:exon	35.0%
	CATCAAGAAGCTCATAGACA+AGG	+	Chr3:100752954-100752973	None:intergenic	40.0%
	CGTGTCATCAAAGATTACCT+TGG	-	Chr3:100752892-100752911	MsG0380017797.01.T01:five_prime_UTR	40.0%
	GTGTATCTTGCTGCACTAAA+TGG	+	Chr3:100753043-100753062	None:intergenic	40.0%
	TGTGCAAACAACATCTACTG+AGG	-	Chr3:100753219-100753238	MsG0380017797.01.T01:five_prime_UTR	40.0%
	TGTGCACTCTCAATCACAAT+TGG	+	Chr3:100753271-100753290	None:intergenic	40.0%
!	AAAGTTTCAGCGCTTCCTTT+TGG	+	Chr3:100752616-100752635	None:intergenic	40.0%
!	TGCTGAAGTCAATTTGTTCC+AGG	-	Chr3:100753186-100753205	MsG0380017797.01.T01:intron	40.0%
!!	ACAATGCGTTGAGTTGAAGA+AGG	-	Chr3:100752387-100752406	MsG0380017797.01.T01:three_prime_UTR	40.0%
	AGATCGTGGTGAAGTCCAAA+AGG	-	Chr3:100752598-100752617	MsG0380017797.01.T01:intron	45.0%
	GAGTAGTTGCTATAGCGTAG+CGG	-	Chr3:100753089-100753108	MsG0380017797.01.T01:intron	45.0%
	TGTGAACTACTTCCACGTGA+AGG	-	Chr3:100752789-100752808	MsG0380017797.01.T01:CDS	45.0%
!	TTCTGGAAAGAAGACGCTGA+TGG	-	Chr3:100752652-100752671	MsG0380017797.01.T01:intron	45.0%
!!	ATTATTTATAAAAAAGAAAT+TGG	+	Chr3:100752533-100752552	None:intergenic	5.0%
	ACTTCCACGTGAAGGTTGCT+GGG	-	Chr3:100752797-100752816	MsG0380017797.01.T01:CDS	50.0%
	ATAAAATGGAAGCGGGGCCA+AGG	+	Chr3:100753300-100753319	None:intergenic	50.0%
	ATAACCCAGCAACCTTCACG+TGG	+	Chr3:100752804-100752823	None:intergenic	50.0%
	TAAAATGGAAGCGGGGCCAA+GGG	+	Chr3:100753299-100753318	None:intergenic	50.0%
	TACTTCCACGTGAAGGTTGC+TGG	-	Chr3:100752796-100752815	MsG0380017797.01.T01:CDS	50.0%
!	TTGGCCCCGCTTCCATTTTA+TGG	-	Chr3:100753299-100753318	MsG0380017797.01.T01:five_prime_UTR	50.0%
	AAAATGGAAGCGGGGCCAAG+GGG	+	Chr3:100753298-100753317	None:intergenic	55.0%
!	GAGAGTGCACAGATGCCCCT+TGG	-	Chr3:100753280-100753299	MsG0380017797.01.T01:five_prime_UTR	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	100752383	100753324	100752383	ID=MsG0380017797.01;Name=MsG0380017797.01
Chr3	mRNA	100752383	100753324	100752383	ID=MsG0380017797.01.T01;Parent=MsG0380017797.01;Name=MsG0380017797.01.T01;_AED=0.45;_eAED=0.45;_QI=273\|1\|0.75\|1\|0.33\|0.5\|4\|77\|57
Chr3	exon	100752383	100752499	100752383	ID=MsG0380017797.01.T01:exon:27428;Parent=MsG0380017797.01.T01
Chr3	exon	100752726	100752929	100752726	ID=MsG0380017797.01.T01:exon:27427;Parent=MsG0380017797.01.T01
Chr3	exon	100753015	100753107	100753015	ID=MsG0380017797.01.T01:exon:27426;Parent=MsG0380017797.01.T01
Chr3	exon	100753215	100753324	100753215	ID=MsG0380017797.01.T01:exon:27425;Parent=MsG0380017797.01.T01
Chr3	five_prime_UTR	100753215	100753324	100753215	ID=MsG0380017797.01.T01:five_prime_utr;Parent=MsG0380017797.01.T01
Chr3	five_prime_UTR	100753015	100753107	100753015	ID=MsG0380017797.01.T01:five_prime_utr;Parent=MsG0380017797.01.T01
Chr3	five_prime_UTR	100752860	100752929	100752860	ID=MsG0380017797.01.T01:five_prime_utr;Parent=MsG0380017797.01.T01
Chr3	CDS	100752726	100752859	100752726	ID=MsG0380017797.01.T01:cds;Parent=MsG0380017797.01.T01
Chr3	CDS	100752460	100752499	100752460	ID=MsG0380017797.01.T01:cds;Parent=MsG0380017797.01.T01
Chr3	three_prime_UTR	100752383	100752459	100752383	ID=MsG0380017797.01.T01:three_prime_utr;Parent=MsG0380017797.01.T01

Gene Sequence	>MsG0380017797.01.T01 ATGTTTCTCCTTCTCTTGTTTTGGAACTTTTACATAGAACTGCACGTGTCATCAAAGATTACCTTGGTGTTCTTAATGAAGACTCTTTTCGAAAGAATTTTCTCCTTGTCTATGAGCTTCTTGATGAAGTCATTGATTTTGGTTATGTGCAAACAACATCTACTGAGGTTTTGA
Protein sequence	>MsG0380017797.01.T01 MFLLLLFWNFYIELHVSSKITLVFLMKTLFERIFSLSMSFLMKSLILVMCKQHLLRF*