AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021876.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021876.01.T01 MTR_4g078160 97.049 305 9 0 3 307 89 393 0.0 605
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021876.01.T01 AT1G75340 39.692 325 151 9 8 306 73 378 1.24e-59 195
MsG0480021876.01.T01 AT1G75340 39.692 325 151 9 8 306 93 398 2.29e-59 195
MsG0480021876.01.T01 AT1G75340 36.119 371 157 12 8 306 73 435 1.00e-49 171

Find 115 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGACGTGGAGTGCCGTTC+TGG 0.197426 4:+65470919 None:intergenic
TTGTCATGTTACAATGAAAA+AGG 0.214628 4:+65465716 MsG0480021875.01.T01:intron
TAGCTCCACTACAATGTTTC+AGG 0.285865 4:-65467286 MsG0480021876.01.T01:CDS
CAACAGGTGGTTGTTGGAAC+TGG 0.318616 4:+65467322 None:intergenic
CTGACGTGGAGTGCCGTTCT+GGG 0.320651 4:+65470920 None:intergenic
GGCATTTACATTGGCTCCAT+TGG 0.328283 4:+65468923 None:intergenic
GGATGATAGTATCTGGTTAA+AGG 0.329999 4:-65466542 MsG0480021876.01.T01:CDS
CTATCTGGAGGAGCTTGTTC+TGG 0.339340 4:+65466028 None:intergenic
GGCATTTGCATTGGCTCCAT+TGG 0.343025 4:+65468872 None:intergenic
TGGAGTGCCGTTCTGGGGCT+TGG 0.345747 4:+65470926 None:intergenic
TGCACTGGAGTACTCATTAA+TGG 0.355560 4:+65467572 None:intergenic
GTCTACCAAACAAATCTATC+TGG 0.360641 4:+65466013 None:intergenic
AGTCTCAAGCTTTAGCCAAC+TGG 0.360859 4:-65468814 MsG0480021876.01.T01:CDS
CAGTATCAATCAAGGACTTT+GGG 0.374042 4:+65465855 None:intergenic
AACAGGTTTCTTACAATTTG+TGG 0.374910 4:+65469327 None:intergenic
CCTACACCAGCGGGGTTGAC+AGG 0.380081 4:-65467363 MsG0480021876.01.T01:CDS
TTTGGTAGACATCTGTGTAT+AGG 0.382359 4:-65466000 MsG0480021876.01.T01:exon
ATATTAGCTATGAGGAATTA+CGG 0.399740 4:-65469389 MsG0480021876.01.T01:CDS
GCGGGGTTGACAGGGTTTCC+AGG 0.404696 4:-65467354 MsG0480021876.01.T01:CDS
CATGCTATGGTCACTGTAAA+GGG 0.409378 4:-65470167 MsG0480021876.01.T01:intron
TCAGTATCAATCAAGGACTT+TGG 0.409504 4:+65465854 None:intergenic
CTAAAGCTTGAGACTGATAA+AGG 0.416164 4:+65468822 None:intergenic
GTATCTGGTTAAAGGAGAAA+TGG 0.421007 4:-65466534 MsG0480021876.01.T01:CDS
GCTGAAAATCTTCTACAATC+TGG 0.429867 4:+65470214 None:intergenic
ACATGCTATGGTCACTGTAA+AGG 0.440855 4:-65470168 MsG0480021876.01.T01:CDS
CCGAATAGATTTCCTGAGTT+GGG 0.442288 4:+65467420 None:intergenic
CTCCTCCAGATAGATTTGTT+TGG 0.444104 4:-65466018 MsG0480021876.01.T01:CDS
ATCTGGTGCTTGCAAGCCTC+AGG 0.444194 4:+65470231 None:intergenic
CTATTCGGCAGTGGAATCTC+AGG 0.451076 4:-65467405 MsG0480021876.01.T01:CDS
AATTACAGAGTTATATCAAC+TGG 0.452469 4:-65465931 MsG0480021876.01.T01:three_prime_UTR
CAACCAGCCACTCAAAATAA+TGG 0.452627 4:-65468846 MsG0480021876.01.T01:CDS
CTTTGGATTCTTACATGCTA+TGG 0.454295 4:-65470180 MsG0480021876.01.T01:CDS
GTGACTTACAACTGAACATC+TGG 0.457439 4:+65467258 None:intergenic
CCCAACTCAGGAAATCTATT+CGG 0.463482 4:-65467420 MsG0480021876.01.T01:CDS
AGCCCCTTGAAAACAACAAA+TGG 0.465513 4:-65470962 MsG0480021876.01.T01:CDS
TGAACCCAACAGGTGGTTGT+TGG 0.468151 4:+65467316 None:intergenic
ACTCCACACCTTGTATCAAA+TGG 0.470402 4:+65465641 MsG0480021875.01.T01:intron
ATTGTTTACCTTTCAAAGCC+AGG 0.471601 4:+65468777 None:intergenic
TTGCATTGGCTCCATTGGAT+TGG 0.473295 4:+65468877 None:intergenic
ATTACGGGCAGCGGCTTATG+AGG 0.476038 4:-65469373 MsG0480021876.01.T01:CDS
TATTAGCTATGAGGAATTAC+GGG 0.477645 4:-65469388 MsG0480021876.01.T01:CDS
AACCCCTTTCCTACACCAGC+GGG 0.481599 4:-65467372 MsG0480021876.01.T01:CDS
AGTTCCAACAACCACCTGTT+GGG 0.482464 4:-65467320 MsG0480021876.01.T01:CDS
CCAATGGAACTAGGCTGCAC+TGG 0.483161 4:+65467557 None:intergenic
TTACATTGGCTCCATTGGAT+TGG 0.483725 4:+65468928 None:intergenic
AACCCCGCTGGTGTAGGAAA+GGG 0.485644 4:+65467369 None:intergenic
AGTGCTCCTTGTGACATTGT+TGG 0.492049 4:-65469414 MsG0480021876.01.T01:CDS
CCACAGACACATTCTCCACT+TGG 0.493241 4:+65466563 None:intergenic
GTCTCAAGCTTTAGCCAACT+GGG 0.494261 4:-65468813 MsG0480021876.01.T01:CDS
CTCTGTAATTCAACCAAGAA+AGG 0.494457 4:+65465944 None:intergenic
CCTCCGCCTCCAATGGAACT+AGG 0.495377 4:+65467548 None:intergenic
CTAGTGTTATTGAACCCAAC+AGG 0.501473 4:+65467306 None:intergenic
AAACTGATTTCGTGCAAGCT+AGG 0.507656 4:+65465741 None:intergenic
CCAGTGCAGCCTAGTTCCAT+TGG 0.509632 4:-65467557 MsG0480021876.01.T01:CDS
CACTGAACCCTGGCTTTGAA+AGG 0.511359 4:-65468785 MsG0480021876.01.T01:intron
TTTGTTAAACTCAACCAACT+TGG 0.511788 4:+65469007 None:intergenic
GAGTTATATCAACTGGTGGA+TGG 0.513907 4:-65465924 MsG0480021876.01.T01:three_prime_UTR
GCCGAATAGATTTCCTGAGT+TGG 0.514471 4:+65467419 None:intergenic
AGTTATATCAACTGGTGGAT+GGG 0.522414 4:-65465923 MsG0480021876.01.T01:three_prime_UTR
TGGTTGAAAGGCATTTGCAT+TGG 0.523106 4:+65468863 None:intergenic
ATACATACCTCCGCCTCCAA+TGG 0.529790 4:+65467541 None:intergenic
TTAAAGGAGAAATGGAATCC+TGG 0.531099 4:-65466526 MsG0480021876.01.T01:CDS
TGTCTGTGGATGATAGTATC+TGG 0.532717 4:-65466549 MsG0480021876.01.T01:CDS
AAACATATTACAATCCAAGT+TGG 0.534996 4:-65469021 MsG0480021876.01.T01:CDS
TAGAAGACTATTACCTCTCC+AGG 0.535337 4:+65466508 None:intergenic
AACAGGTGGTTGTTGGAACT+GGG 0.536630 4:+65467323 None:intergenic
TGGAACTGGGAAGTAGAACC+TGG 0.538756 4:+65467336 None:intergenic
TGTTGGAGATATTAGCTATG+AGG 0.539151 4:-65469397 MsG0480021876.01.T01:CDS
CTATGAGGAATTACGGGCAG+CGG 0.541621 4:-65469382 MsG0480021876.01.T01:CDS
TTCAGCAAGAGAAACCACTT+TGG 0.543236 4:-65470197 MsG0480021876.01.T01:CDS
CCTAGTTCCATTGGAGGCGG+AGG 0.544994 4:-65467548 MsG0480021876.01.T01:intron
CAACCCCGCTGGTGTAGGAA+AGG 0.545368 4:+65467368 None:intergenic
ATTCAAGTCCATTTGATACA+AGG 0.545768 4:-65465649 MsG0480021876.01.T01:three_prime_UTR
GCTTATGAGGATAATAAGAA+AGG 0.550923 4:-65469360 MsG0480021876.01.T01:CDS
CCTGTCAACCCCGCTGGTGT+AGG 0.552858 4:+65467363 None:intergenic
GGAAACCCTGTCAACCCCGC+TGG 0.553188 4:+65467357 None:intergenic
AGGCATGTGACACAGCGGTT+AGG 0.556126 4:-65465980 MsG0480021876.01.T01:three_prime_UTR
ATTGTAATCAGTATCAATCA+AGG 0.559423 4:+65465847 None:intergenic
CTACACCAGCGGGGTTGACA+GGG 0.559612 4:-65467362 MsG0480021876.01.T01:CDS
GTTCAAAACTTCCAATCCAA+TGG 0.564091 4:-65468939 MsG0480021876.01.T01:CDS
GTGCAGCCTAGTTCCATTGG+AGG 0.564267 4:-65467554 MsG0480021876.01.T01:CDS
TGACGTGGAGTGCCGTTCTG+GGG 0.565499 4:+65470921 None:intergenic
CAGTTCCAACAACCACCTGT+TGG 0.567746 4:-65467321 MsG0480021876.01.T01:CDS
TTGTTTACCTTTCAAAGCCA+GGG 0.571133 4:+65468778 None:intergenic
ACTCAAAACTTCCAATCCAA+TGG 0.572511 4:-65468888 MsG0480021876.01.T01:CDS
ACCCCGCTGGTGTAGGAAAG+GGG 0.586779 4:+65467370 None:intergenic
CAGCCTAGTTCCATTGGAGG+CGG 0.589718 4:-65467551 MsG0480021876.01.T01:CDS
CTGGGTGCTTCACTGAACCC+TGG 0.589919 4:-65468795 MsG0480021876.01.T01:CDS
TCAGGAAATCTATTCGGCAG+TGG 0.590143 4:-65467414 MsG0480021876.01.T01:CDS
GTACTCATTAATGGTGCAGA+GGG 0.590273 4:+65467581 None:intergenic
AGTCCATTTGATACAAGGTG+TGG 0.602627 4:-65465644 MsG0480021876.01.T01:three_prime_UTR
CACAGACACATTCTCCACTT+GGG 0.605135 4:+65466564 None:intergenic
TACAGAGTTATATCAACTGG+TGG 0.607159 4:-65465928 MsG0480021876.01.T01:three_prime_UTR
TGGTTGAAAGGCATTTACAT+TGG 0.611345 4:+65468914 None:intergenic
TTGAAGATGTACAGATCCTG+AGG 0.613427 4:-65470247 MsG0480021876.01.T01:intron
TTGCAGAAATGCGTCCCAAG+TGG 0.622726 4:-65466578 MsG0480021876.01.T01:intron
TTGAAAACAACAAATGGAGT+CGG 0.631566 4:-65470956 MsG0480021876.01.T01:CDS
TCTTCATCCAAGCCCCAGAA+CGG 0.633134 4:-65470933 MsG0480021876.01.T01:CDS
TACCAAACAAATCTATCTGG+AGG 0.634565 4:+65466016 None:intergenic
TGCTGCCTGAAACATTGTAG+TGG 0.637731 4:+65467281 None:intergenic
GGTTCAGTGAAGCACCCAGT+TGG 0.640946 4:+65468799 None:intergenic
GTGTTATTGAACCCAACAGG+TGG 0.648329 4:+65467309 None:intergenic
TTCGGCAGTGGAATCTCAGG+TGG 0.654074 4:-65467402 MsG0480021876.01.T01:CDS
TGGATGGGCAACGAGAAATG+AGG 0.659581 4:-65465908 MsG0480021876.01.T01:three_prime_UTR
AGTACTCATTAATGGTGCAG+AGG 0.660040 4:+65467580 None:intergenic
GGAGAAATGGAATCCTGGAG+AGG 0.663151 4:-65466521 MsG0480021876.01.T01:intron
CAACCCCTTTCCTACACCAG+CGG 0.664582 4:-65467373 MsG0480021876.01.T01:CDS
ATATCTCCAACAATGTCACA+AGG 0.680130 4:+65469408 None:intergenic
CCAAGTGGAGAATGTGTCTG+TGG 0.682566 4:-65466563 MsG0480021876.01.T01:CDS
TAGCATGTAAGAATCCAAAG+TGG 0.688033 4:+65470183 None:intergenic
ATGGGCAACGAGAAATGAGG+AGG 0.688805 4:-65465905 MsG0480021876.01.T01:three_prime_UTR
GATTTGTTATCAGACTGACG+TGG 0.704707 4:+65470906 None:intergenic
ACCCCTTTCCTACACCAGCG+GGG 0.708861 4:-65467371 MsG0480021876.01.T01:CDS
ACGTTGAGAGAAGACGTCAG+AGG 0.742655 4:+65468960 None:intergenic
TGTATAGGCATGTGACACAG+CGG 0.754121 4:-65465985 MsG0480021876.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGTAAATATAATTAGAT+AGG + Chr4:65466158-65466177 None:intergenic 10.0%
!! ATAGTAAATATAATTAGATA+GGG + Chr4:65466157-65466176 None:intergenic 10.0%
!! AATAATATATTGCTTAATCA+TGG - Chr4:65466500-65466519 MsG0480021876.01.T01:intron 15.0%
!! AATAATTAAAAAAATACACG+TGG - Chr4:65468750-65468769 MsG0480021876.01.T01:intron 15.0%
!! AATTTACTAAAGAAATAAGT+AGG + Chr4:65467407-65467426 None:intergenic 15.0%
!! CAAATTATAACATTTATAAC+TGG + Chr4:65469693-65469712 None:intergenic 15.0%
!! CAGTTATAAATGTTATAATT+TGG - Chr4:65469691-65469710 MsG0480021876.01.T01:intron 15.0%
!! GTAACAATATATATATTTCA+AGG + Chr4:65467531-65467550 None:intergenic 15.0%
!! TGAAATATATATATTGTTAC+AGG - Chr4:65467531-65467550 MsG0480021876.01.T01:intron 15.0%
!!! AAATGTTAAATTTTAATGCT+CGG + Chr4:65470279-65470298 None:intergenic 15.0%
!!! ATATTTTAAAATTCAAGTGT+TGG - Chr4:65470464-65470483 MsG0480021876.01.T01:intron 15.0%
!!! TATTTTAAAATTCAAGTGTT+GGG - Chr4:65470465-65470484 MsG0480021876.01.T01:intron 15.0%
!!! TTTGTAGTTTTTTTTCTTAA+GGG - Chr4:65468851-65468870 MsG0480021876.01.T01:CDS 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+AGG - Chr4:65468850-65468869 MsG0480021876.01.T01:CDS 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG + Chr4:65468869-65468850 None:intergenic 15.0%
!! AAAAAAAACACATAACTAAG+GGG + Chr4:65470767-65470786 None:intergenic 20.0%
!! AATCATGAGAATATCAAAAT+AGG + Chr4:65468926-65468945 None:intergenic 20.0%
!! AATCTTTAAACTGTAACATA+TGG + Chr4:65469762-65469781 None:intergenic 20.0%
!! ACAGAAAAATTTCAGTTTAA+GGG - Chr4:65470911-65470930 MsG0480021876.01.T01:CDS 20.0%
!! AGAAAAAAAACACATAACTA+AGG + Chr4:65470769-65470788 None:intergenic 20.0%
!! ATTTGGATATTTCTTGATTT+AGG + Chr4:65467890-65467909 None:intergenic 20.0%
!! CTATTAAGCCTATAAAATAA+AGG + Chr4:65468477-65468496 None:intergenic 20.0%
!! GAAAAAAAACACATAACTAA+GGG + Chr4:65470768-65470787 None:intergenic 20.0%
!! TAAATATAATTAGATAGGGA+GGG + Chr4:65466153-65466172 None:intergenic 20.0%
!! TTGTAACATGACAAAAATTA+TGG - Chr4:65470881-65470900 MsG0480021876.01.T01:intron 20.0%
!!! ATACTTTTTCTTGAATCTTA+TGG - Chr4:65469977-65469996 MsG0480021876.01.T01:intron 20.0%
!!! ATCTACTATTTGTTTTTGTT+TGG - Chr4:65468055-65468074 MsG0480021876.01.T01:intron 20.0%
!!! ATCTTGTTCCTTTATTTTAT+AGG - Chr4:65468466-65468485 MsG0480021876.01.T01:intron 20.0%
!!! ATTTTAAAATTCAAGTGTTG+GGG - Chr4:65470466-65470485 MsG0480021876.01.T01:intron 20.0%
!!! GATTAAGAAGATTTTAATGT+TGG - Chr4:65469778-65469797 MsG0480021876.01.T01:intron 20.0%
!!! GGTATTATTTTTATGCATAA+GGG - Chr4:65466442-65466461 MsG0480021876.01.T01:intron 20.0%
!!! GTGTATTTTGTTTTTTTGAA+TGG - Chr4:65468287-65468306 MsG0480021876.01.T01:intron 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG + Chr4:65468868-65468849 None:intergenic 20.0%
!!! TAATGTTAGTTTTTTGTTGT+GGG - Chr4:65468332-65468351 MsG0480021876.01.T01:intron 20.0%
!!! TCTACTATTTGTTTTTGTTT+GGG - Chr4:65468056-65468075 MsG0480021876.01.T01:intron 20.0%
!!! TTAATGTTAGTTTTTTGTTG+TGG - Chr4:65468331-65468350 MsG0480021876.01.T01:intron 20.0%
!!! TTGTAGTTTTTTTTCTTAAG+GGG - Chr4:65468852-65468871 MsG0480021876.01.T01:CDS 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG + Chr4:65468541-65468560 None:intergenic 20.0%
!!! TTTTCTATTCAGAAGTAAAA+GGG + Chr4:65465850-65465869 None:intergenic 20.0%
! AAAAATGACTACAAATGTGA+AGG + Chr4:65466100-65466119 None:intergenic 25.0%
! AAACATATTACAATCCAAGT+TGG - Chr4:65467567-65467586 MsG0480021876.01.T01:CDS 25.0%
! AAATATAATTAGATAGGGAG+GGG + Chr4:65466152-65466171 None:intergenic 25.0%
! AACAAGATATAAACATTGCA+TGG + Chr4:65468454-65468473 None:intergenic 25.0%
! AATAGAAAACATAAAAAGCC+AGG - Chr4:65465861-65465880 MsG0480021876.01.T01:three_prime_UTR 25.0%
! AATATATTGCTTAATCATGG+AGG - Chr4:65466503-65466522 MsG0480021876.01.T01:intron 25.0%
! AATCTCTTAACATCACAAAT+AGG + Chr4:65467314-65467333 None:intergenic 25.0%
! AATTACAGAGTTATATCAAC+TGG - Chr4:65470657-65470676 MsG0480021876.01.T01:intron 25.0%
! ACAAGATATAAACATTGCAT+GGG + Chr4:65468453-65468472 None:intergenic 25.0%
! ACAAGGAATAAAAAAAGTTC+CGG - Chr4:65466929-65466948 MsG0480021876.01.T01:intron 25.0%
! ACTAAAGAAATAAGTAGGTA+GGG + Chr4:65467402-65467421 None:intergenic 25.0%
! AGGAAATGTATAATGATTAG+CGG + Chr4:65466670-65466689 None:intergenic 25.0%
! ATATTAGCTATGAGGAATTA+CGG - Chr4:65467199-65467218 MsG0480021876.01.T01:intron 25.0%
! ATTGTAATCAGTATCAATCA+AGG + Chr4:65470744-65470763 None:intergenic 25.0%
! CAGAAAAATTTCAGTTTAAG+GGG - Chr4:65470912-65470931 MsG0480021876.01.T01:CDS 25.0%
! CATGTATCTTTCTATTATAG+TGG - Chr4:65468113-65468132 MsG0480021876.01.T01:intron 25.0%
! CTTTCTATTATAGTGGTTTA+AGG - Chr4:65468120-65468139 MsG0480021876.01.T01:intron 25.0%
! CTTTGTAATGCAAATGAAAA+TGG + Chr4:65466776-65466795 None:intergenic 25.0%
! GACAGAAAAATTTCAGTTTA+AGG - Chr4:65470910-65470929 MsG0480021876.01.T01:CDS 25.0%
! GATACATACATACATAGTAT+TGG - Chr4:65470194-65470213 MsG0480021876.01.T01:CDS 25.0%
! GTAAATATAATTAGATAGGG+AGG + Chr4:65466154-65466173 None:intergenic 25.0%
! GTGGAAAAAGAAAAAGAAAA+AGG + Chr4:65466257-65466276 None:intergenic 25.0%
! TACTAAAGAAATAAGTAGGT+AGG + Chr4:65467403-65467422 None:intergenic 25.0%
! TATGTATGTATGTATCACAA+AGG + Chr4:65470190-65470209 None:intergenic 25.0%
! TGAAAAAATCATGTCATATG+TGG - Chr4:65470792-65470811 MsG0480021876.01.T01:intron 25.0%
! TGTTAAATGTGAAGAATAGA+TGG + Chr4:65466638-65466657 None:intergenic 25.0%
! TTATATACTTCACTAAAGCT+TGG - Chr4:65466309-65466328 MsG0480021876.01.T01:intron 25.0%
! TTGTCATGTTACAATGAAAA+AGG + Chr4:65470875-65470894 None:intergenic 25.0%
!! AACTGAAATTTTTCTGTCTT+AGG + Chr4:65470908-65470927 None:intergenic 25.0%
!! AATGATGGTTTTCTTATGTT+TGG - Chr4:65468244-65468263 MsG0480021876.01.T01:intron 25.0%
!! ATTTTGTATCTTCACATCAA+AGG + Chr4:65465945-65465964 None:intergenic 25.0%
!! CATAAGAAAACCATCATTTT+AGG + Chr4:65468242-65468261 None:intergenic 25.0%
!! GAAAGTTGTACAACTATTTT+TGG + Chr4:65469438-65469457 None:intergenic 25.0%
!! GATATGTTTTCTCAATTTGT+GGG - Chr4:65470488-65470507 MsG0480021876.01.T01:intron 25.0%
!! GTTTTCTATTCAGAAGTAAA+AGG + Chr4:65465851-65465870 None:intergenic 25.0%
!! TTTCTTCATTTTCAATTGTG+TGG - Chr4:65467851-65467870 MsG0480021876.01.T01:intron 25.0%
!!! AACTTCTGAAATGATTTTCA+AGG + Chr4:65466719-65466738 None:intergenic 25.0%
!!! ACATATGACATGATTTTTTC+AGG + Chr4:65470793-65470812 None:intergenic 25.0%
!!! ATATCCAAATTTTAGCTAAC+AGG - Chr4:65467900-65467919 MsG0480021876.01.T01:intron 25.0%
!!! ATGATTTTCAAGGATAAGTA+AGG + Chr4:65466709-65466728 None:intergenic 25.0%
!!! CATCATTTTAGGTATGTAAT+CGG + Chr4:65468231-65468250 None:intergenic 25.0%
!!! GGGTATTATTTTTATGCATA+AGG - Chr4:65466441-65466460 MsG0480021876.01.T01:intron 25.0%
!!! TCACATTTGTAGTCATTTTT+CGG - Chr4:65466100-65466119 MsG0480021876.01.T01:intron 25.0%
!!! TGATTTTCAAGGATAAGTAA+GGG + Chr4:65466708-65466727 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG + Chr4:65468540-65468559 None:intergenic 25.0%
!!! TTTGTTTTTGTTTGGGATTA+TGG - Chr4:65468063-65468082 MsG0480021876.01.T01:intron 25.0%
!!! TTTTTTTTTATGTCTGCTCT+TGG - Chr4:65468950-65468969 MsG0480021876.01.T01:CDS 25.0%
AACAGGTTTCTTACAATTTG+TGG + Chr4:65467264-65467283 None:intergenic 30.0%
AACTCACAAGTAACTAAAGA+AGG + Chr4:65466878-65466897 None:intergenic 30.0%
AAGGCTCTATTAAAGTTTGT+TGG + Chr4:65466859-65466878 None:intergenic 30.0%
AATTGGGTCATTTACTTTGT+AGG + Chr4:65469667-65469686 None:intergenic 30.0%
ACAAACATTGATAAGGAACA+TGG + Chr4:65466226-65466245 None:intergenic 30.0%
ACATTTATAACTGGTGCAAT+TGG + Chr4:65469684-65469703 None:intergenic 30.0%
ATGATGTTGTGATAAACTGT+AGG - Chr4:65469132-65469151 MsG0480021876.01.T01:intron 30.0%
ATGTTCCTTATCAATGTTTG+TGG - Chr4:65466225-65466244 MsG0480021876.01.T01:intron 30.0%
ATTATGGTGTGATTGTCAAA+AGG - Chr4:65468079-65468098 MsG0480021876.01.T01:intron 30.0%
ATTCAAGTCCATTTGATACA+AGG - Chr4:65470939-65470958 MsG0480021876.01.T01:CDS 30.0%
ATTGCAACTTCTTGAAACTT+AGG + Chr4:65468512-65468531 None:intergenic 30.0%
ATTGGGTCATTTACTTTGTA+GGG + Chr4:65469666-65469685 None:intergenic 30.0%
CATTTATAACTGGTGCAATT+GGG + Chr4:65469683-65469702 None:intergenic 30.0%
CGATTACATACCTAAAATGA+TGG - Chr4:65468229-65468248 MsG0480021876.01.T01:intron 30.0%
CTGTTTGTAACTTTCTTGTT+AGG - Chr4:65468984-65469003 MsG0480021876.01.T01:CDS 30.0%
GCTTATGAGGATAATAAGAA+AGG - Chr4:65467228-65467247 MsG0480021876.01.T01:intron 30.0%
GGATTTGATTAAATTGTCAC+AGG + Chr4:65469396-65469415 None:intergenic 30.0%
GGTTCAATACTAACAAAAGT+TGG + Chr4:65469869-65469888 None:intergenic 30.0%
GGTTGACTATTGAATGAAAA+TGG + Chr4:65469417-65469436 None:intergenic 30.0%
TACAGTTTATCACAACATCA+TGG + Chr4:65469133-65469152 None:intergenic 30.0%
TAGATAGCAGTTGTAGAAAA+AGG + Chr4:65468040-65468059 None:intergenic 30.0%
TATTAGCTATGAGGAATTAC+GGG - Chr4:65467200-65467219 MsG0480021876.01.T01:intron 30.0%
TATTGGATAGAATCTGCAAT+AGG - Chr4:65470211-65470230 MsG0480021876.01.T01:CDS 30.0%
TCAAGAGTGGAAAATTGATT+AGG + Chr4:65467058-65467077 None:intergenic 30.0%
TCAATACTAACAAAAGTTGG+AGG + Chr4:65469866-65469885 None:intergenic 30.0%
TCTTAACTAGTGCACTAATA+CGG - Chr4:65467099-65467118 MsG0480021876.01.T01:intron 30.0%
TTATGGTGTGATTGTCAAAA+GGG - Chr4:65468080-65468099 MsG0480021876.01.T01:intron 30.0%
TTGAAAACAACAAATGGAGT+CGG - Chr4:65465632-65465651 MsG0480021876.01.T01:three_prime_UTR 30.0%
TTGCAACTTCTTGAAACTTA+GGG + Chr4:65468511-65468530 None:intergenic 30.0%
TTTGCCTGTTAGCTAAAATT+TGG + Chr4:65467907-65467926 None:intergenic 30.0%
TTTGTTAAACTCAACCAACT+TGG + Chr4:65467584-65467603 None:intergenic 30.0%
! GGATATGTTTTCTCAATTTG+TGG - Chr4:65470487-65470506 MsG0480021876.01.T01:intron 30.0%
! GTTTCAAGAAGTTGCAATTT+TGG - Chr4:65468514-65468533 MsG0480021876.01.T01:intron 30.0%
! TCAAAACCTCTTTCATCTTT+TGG + Chr4:65466747-65466766 None:intergenic 30.0%
! TCACAAAGGAAATTTTGTCA+TGG + Chr4:65470176-65470195 None:intergenic 30.0%
! TCTCTTTTCAGTATAGAAGT+TGG + Chr4:65467034-65467053 None:intergenic 30.0%
! TTCAGGTTCATTTCAATAGA+TGG + Chr4:65466986-65467005 None:intergenic 30.0%
! TTCTTTTTCCACTTTGCATT+GGG - Chr4:65466265-65466284 MsG0480021876.01.T01:intron 30.0%
! TTGTTAGTATTGAACCTACT+TGG - Chr4:65469873-65469892 MsG0480021876.01.T01:intron 30.0%
! TTTCTTTTTCCACTTTGCAT+TGG - Chr4:65466264-65466283 MsG0480021876.01.T01:intron 30.0%
!! AAAGATGAAAGAGGTTTTGA+TGG - Chr4:65466747-65466766 MsG0480021876.01.T01:intron 30.0%
!! AAGATGAAAGAGGTTTTGAT+GGG - Chr4:65466748-65466767 MsG0480021876.01.T01:intron 30.0%
!! GAAGAAAATGTTCTAAAGCA+TGG + Chr4:65467838-65467857 None:intergenic 30.0%
!! TTCTGCCAAATTTTAATGCT+CGG + Chr4:65470420-65470439 None:intergenic 30.0%
!!! ACATTTGTAGTCATTTTTCG+GGG - Chr4:65466102-65466121 MsG0480021876.01.T01:intron 30.0%
!!! ACTCCATTTGTTGTTTTCAA+GGG + Chr4:65465632-65465651 MsG0480021875.01.T01:intron 30.0%
!!! CACATTTGTAGTCATTTTTC+GGG - Chr4:65466101-65466120 MsG0480021876.01.T01:intron 30.0%
!!! TAAAGGACCATTATTTTGAG+TGG + Chr4:65467752-65467771 None:intergenic 30.0%
AAAATAACGCCACCTATTGT+TGG - Chr4:65465817-65465836 MsG0480021876.01.T01:three_prime_UTR 35.0%
AAAGTAGGACACAAACAATC+AGG + Chr4:65467983-65468002 None:intergenic 35.0%
AAATAAGTAGGTAGGGCTTA+AGG + Chr4:65467395-65467414 None:intergenic 35.0%
AACTGTAGGCATATTAGAAC+AGG + Chr4:65467281-65467300 None:intergenic 35.0%
AAGAGCCACAAACATTGATA+AGG + Chr4:65466233-65466252 None:intergenic 35.0%
ACATCAAAGGCAAAATCCTA+AGG + Chr4:65465932-65465951 None:intergenic 35.0%
ACTCAAAACTTCCAATCCAA+TGG - Chr4:65467700-65467719 MsG0480021876.01.T01:intron 35.0%
ATATCTCCAACAATGTCACA+AGG + Chr4:65467183-65467202 None:intergenic 35.0%
ATCGCAACTTCTTGAAACTT+AGG - Chr4:65468880-65468899 MsG0480021876.01.T01:CDS 35.0%
ATCGTATAGAGATATTGACG+AGG - Chr4:65467957-65467976 MsG0480021876.01.T01:intron 35.0%
ATTGTTTACCTTTCAAAGCC+AGG + Chr4:65467814-65467833 None:intergenic 35.0%
CAAAGAGCTTAACTGCTATA+CGG - Chr4:65467928-65467947 MsG0480021876.01.T01:intron 35.0%
CAACTATCTGAAAATGCTCA+AGG + Chr4:65469520-65469539 None:intergenic 35.0%
CAGTATCAATCAAGGACTTT+GGG + Chr4:65470736-65470755 None:intergenic 35.0%
CTAAAGCTTGAGACTGATAA+AGG + Chr4:65467769-65467788 None:intergenic 35.0%
CTAATATGCCTACAGTTTCA+CGG - Chr4:65467284-65467303 MsG0480021876.01.T01:CDS 35.0%
CTCTGTAATTCAACCAAGAA+AGG + Chr4:65470647-65470666 None:intergenic 35.0%
CTTTGGATTCTTACATGCTA+TGG - Chr4:65466408-65466427 MsG0480021876.01.T01:intron 35.0%
GCTGAAAATCTTCTACAATC+TGG + Chr4:65466377-65466396 None:intergenic 35.0%
GGATGATAGTATCTGGTTAA+AGG - Chr4:65470046-65470065 MsG0480021876.01.T01:intron 35.0%
GTATCTGGTTAAAGGAGAAA+TGG - Chr4:65470054-65470073 MsG0480021876.01.T01:intron 35.0%
GTCTACCAAACAAATCTATC+TGG + Chr4:65470578-65470597 None:intergenic 35.0%
GTTATAGACTCATGATCCTT+AGG - Chr4:65465913-65465932 MsG0480021876.01.T01:three_prime_UTR 35.0%
GTTCAAAACTTCCAATCCAA+TGG - Chr4:65467649-65467668 MsG0480021876.01.T01:intron 35.0%
TACAGAGTTATATCAACTGG+TGG - Chr4:65470660-65470679 MsG0480021876.01.T01:intron 35.0%
TACCAAACAAATCTATCTGG+AGG + Chr4:65470575-65470594 None:intergenic 35.0%
TACTCATGTTTGCAACTACA+AGG - Chr4:65467470-65467489 MsG0480021876.01.T01:intron 35.0%
TAGCATGTAAGAATCCAAAG+TGG + Chr4:65466408-65466427 None:intergenic 35.0%
TATGTTCATGCGATTGTCTA+TGG - Chr4:65467500-65467519 MsG0480021876.01.T01:intron 35.0%
TCAGTATCAATCAAGGACTT+TGG + Chr4:65470737-65470756 None:intergenic 35.0%
TCAGTTCACAGTTTGTAACA+AGG - Chr4:65466912-65466931 MsG0480021876.01.T01:intron 35.0%
TCGCAACTTCTTGAAACTTA+GGG - Chr4:65468881-65468900 MsG0480021876.01.T01:CDS 35.0%
TGAAAATGCTCAAGGTCAAT+GGG + Chr4:65469512-65469531 None:intergenic 35.0%
TGCAACCAACTAAAGAAAGT+AGG + Chr4:65467998-65468017 None:intergenic 35.0%
TGCAACTTCTTGAAACTTAG+GGG + Chr4:65468510-65468529 None:intergenic 35.0%
TGTCTATGTTTGATGAGAGA+TGG + Chr4:65465749-65465768 None:intergenic 35.0%
TGTGTCCTACTTTCTTTAGT+TGG - Chr4:65467990-65468009 MsG0480021876.01.T01:intron 35.0%
TGTTGGAGATATTAGCTATG+AGG - Chr4:65467191-65467210 MsG0480021876.01.T01:intron 35.0%
TTAAAGGAGAAATGGAATCC+TGG - Chr4:65470062-65470081 MsG0480021876.01.T01:intron 35.0%
TTGGGAATAAGTGTCTATTC+AGG - Chr4:65470119-65470138 MsG0480021876.01.T01:intron 35.0%
TTGTTTACCTTTCAAAGCCA+GGG + Chr4:65467813-65467832 None:intergenic 35.0%
TTTGGTAGACATCTGTGTAT+AGG - Chr4:65470588-65470607 MsG0480021876.01.T01:intron 35.0%
! AAGGGCATATATCCAACAAT+AGG + Chr4:65465832-65465851 None:intergenic 35.0%
! AGTTATATCAACTGGTGGAT+GGG - Chr4:65470665-65470684 MsG0480021876.01.T01:intron 35.0%
! GAATCTGCAATAGGATCTTT+TGG - Chr4:65470220-65470239 MsG0480021876.01.T01:CDS 35.0%
! GATAAGTAAGGGATTAGCAA+GGG + Chr4:65466697-65466716 None:intergenic 35.0%
! GTTTCAAGAAGTTGCGATTT+TGG + Chr4:65468878-65468897 None:intergenic 35.0%
! TTTAATGTTGGTAGAGATGC+TGG - Chr4:65469790-65469809 MsG0480021876.01.T01:intron 35.0%
!! AGATGAAAGAGGTTTTGATG+GGG - Chr4:65466749-65466768 MsG0480021876.01.T01:intron 35.0%
!! AGCTATTTCTCTTTCAAGAG+TGG + Chr4:65467071-65467090 None:intergenic 35.0%
!! GTGAATTACATAAGAGTGTC+AGG + Chr4:65469584-65469603 None:intergenic 35.0%
!! TGCACAACTTTTGAGGAATA+TGG + Chr4:65466574-65466593 None:intergenic 35.0%
!! TGGTTGAAAGGCATTTACAT+TGG + Chr4:65467677-65467696 None:intergenic 35.0%
!!! ATTGGATTGGAAGTTTTGAG+TGG + Chr4:65467701-65467720 None:intergenic 35.0%
!!! CGTATTTTTAGGTCCTTTCT+TGG - Chr4:65470631-65470650 MsG0480021876.01.T01:intron 35.0%
!!! CTCCATTTGTTGTTTTCAAG+GGG + Chr4:65465631-65465650 MsG0480021875.01.T01:intron 35.0%
!!! GACTCCATTTGTTGTTTTCA+AGG + Chr4:65465633-65465652 MsG0480021875.01.T01:intron 35.0%
!!! GTTAGTTTTTTGTTGTGGGT+GGG - Chr4:65468336-65468355 MsG0480021876.01.T01:intron 35.0%
!!! TGTTAGTTTTTTGTTGTGGG+TGG - Chr4:65468335-65468354 MsG0480021876.01.T01:intron 35.0%
!!! TTAGTTTTTTGTTGTGGGTG+GGG - Chr4:65468337-65468356 MsG0480021876.01.T01:intron 35.0%
AACCTGAAAACATCACCTCA+AGG - Chr4:65466998-65467017 MsG0480021876.01.T01:intron 40.0%
AATAGATGGTGCATTCCCAA+TGG + Chr4:65466972-65466991 None:intergenic 40.0%
ACATGCTATGGTCACTGTAA+AGG - Chr4:65466420-65466439 MsG0480021876.01.T01:intron 40.0%
ACTCCACACCTTGTATCAAA+TGG + Chr4:65470950-65470969 None:intergenic 40.0%
ACTCTGTATATGCACAGTGT+AGG + Chr4:65465895-65465914 None:intergenic 40.0%
ACTTATTCCCAACCTCAACA+AGG + Chr4:65470111-65470130 None:intergenic 40.0%
AGAAAAAGGAATCCCTGTAG+AGG + Chr4:65468026-65468045 None:intergenic 40.0%
AGCCCCTTGAAAACAACAAA+TGG - Chr4:65465626-65465645 MsG0480021876.01.T01:three_prime_UTR 40.0%
AGTACTCATTAATGGTGCAG+AGG + Chr4:65469011-65469030 None:intergenic 40.0%
AGTCCATTTGATACAAGGTG+TGG - Chr4:65470944-65470963 MsG0480021876.01.T01:CDS 40.0%
AGTGTAGTTTCAACTGAGCA+CGG - Chr4:65465782-65465801 MsG0480021876.01.T01:three_prime_UTR 40.0%
ATAGATGGTGCATTCCCAAT+GGG + Chr4:65466971-65466990 None:intergenic 40.0%
ATATAAGGTGGTTGAGGTGT+GGG + Chr4:65468400-65468419 None:intergenic 40.0%
ATGCACTTTGGCTGAAACAA+AGG + Chr4:65465992-65466011 None:intergenic 40.0%
ATTCCTCAAAAGTTGTGCAG+TGG - Chr4:65466575-65466594 MsG0480021876.01.T01:CDS 40.0%
CAACCAGCCACTCAAAATAA+TGG - Chr4:65467742-65467761 MsG0480021876.01.T01:intron 40.0%
CAAGTTCTGTTGAATGACCT+AGG - Chr4:65468188-65468207 MsG0480021876.01.T01:intron 40.0%
CACAACATCATGGTCAAACA+AGG + Chr4:65469123-65469142 None:intergenic 40.0%
CATGCTATGGTCACTGTAAA+GGG - Chr4:65466421-65466440 MsG0480021876.01.T01:intron 40.0%
CCAAGCAAATTCCAATCACT+TGG + Chr4:65466799-65466818 None:intergenic 40.0%
CCCAACTCAGGAAATCTATT+CGG - Chr4:65469168-65469187 MsG0480021876.01.T01:intron 40.0%
CCGAATAGATTTCCTGAGTT+GGG + Chr4:65469171-65469190 None:intergenic 40.0%
CGCAACTTCTTGAAACTTAG+GGG - Chr4:65468882-65468901 MsG0480021876.01.T01:CDS 40.0%
CGTCTCCGAGCATTAAAATT+TGG - Chr4:65470271-65470290 MsG0480021876.01.T01:intron 40.0%
CTGAAAATGCTCAAGGTCAA+TGG + Chr4:65469513-65469532 None:intergenic 40.0%
GAAAGTTAGTGCTGCAACAA+CGG + Chr4:65469907-65469926 None:intergenic 40.0%
GAAATGAACCCAATGCAAAG+TGG + Chr4:65466276-65466295 None:intergenic 40.0%
GAGAGGTAATAGTCTTCTAC+TGG - Chr4:65470084-65470103 MsG0480021876.01.T01:intron 40.0%
GAGTTATATCAACTGGTGGA+TGG - Chr4:65470664-65470683 MsG0480021876.01.T01:intron 40.0%
GCAACTTCTTGAAACTTAGG+GGG - Chr4:65468883-65468902 MsG0480021876.01.T01:CDS 40.0%
GCAACTTCTTGAAACTTAGG+GGG + Chr4:65468902-65468883 None:intergenic 40.0%
GCATTACAAAGCCAAGTGAT+TGG - Chr4:65466785-65466804 MsG0480021876.01.T01:intron 40.0%
GGATCTTTGCTAACTGCATT+AGG + Chr4:65466553-65466572 None:intergenic 40.0%
GGCATATATCCAACAATAGG+TGG + Chr4:65465829-65465848 None:intergenic 40.0%
GTACTCATTAATGGTGCAGA+GGG + Chr4:65469010-65469029 None:intergenic 40.0%
GTGACTTACAACTGAACATC+TGG + Chr4:65469333-65469352 None:intergenic 40.0%
GTTACAAACTGTGAACTGAC+TGG + Chr4:65466911-65466930 None:intergenic 40.0%
TAGAAGACTATTACCTCTCC+AGG + Chr4:65470083-65470102 None:intergenic 40.0%
TAGCTCCACTACAATGTTTC+AGG - Chr4:65469302-65469321 MsG0480021876.01.T01:intron 40.0%
TAGGAATTCCGTGAAACTGT+AGG + Chr4:65467295-65467314 None:intergenic 40.0%
TATGCACAGTGTAGGTGTTT+AGG + Chr4:65465887-65465906 None:intergenic 40.0%
TGAATGCTGTATTGCCCATT+GGG - Chr4:65466954-65466973 MsG0480021876.01.T01:intron 40.0%
TGCTGTCCAAAAGATGAAAG+AGG - Chr4:65466738-65466757 MsG0480021876.01.T01:intron 40.0%
TGTCTGTGGATGATAGTATC+TGG - Chr4:65470039-65470058 MsG0480021876.01.T01:intron 40.0%
TGTTGCAGCACTAACTTTCT+GGG - Chr4:65469908-65469927 MsG0480021876.01.T01:intron 40.0%
TTATGTCTGCTCTTGGCATA+TGG - Chr4:65468957-65468976 MsG0480021876.01.T01:CDS 40.0%
TTCAGCAAGAGAAACCACTT+TGG - Chr4:65466391-65466410 MsG0480021876.01.T01:intron 40.0%
TTGAAGATGTACAGATCCTG+AGG - Chr4:65466341-65466360 MsG0480021876.01.T01:intron 40.0%
TTGTTGCAGCACTAACTTTC+TGG - Chr4:65469907-65469926 MsG0480021876.01.T01:intron 40.0%
! AAACTGATTTCGTGCAAGCT+AGG + Chr4:65470850-65470869 None:intergenic 40.0%
! ACCGAGTCAAAATTGGCTTA+GGG - Chr4:65468790-65468809 MsG0480021876.01.T01:CDS 40.0%
! CCAAGTGATTGGAATTTGCT+TGG - Chr4:65466796-65466815 MsG0480021876.01.T01:intron 40.0%
! CTAGTGTTATTGAACCCAAC+AGG + Chr4:65469285-65469304 None:intergenic 40.0%
! CTCCTCCAGATAGATTTGTT+TGG - Chr4:65470570-65470589 MsG0480021876.01.T01:intron 40.0%
! GGATAAGTAAGGGATTAGCA+AGG + Chr4:65466698-65466717 None:intergenic 40.0%
! TGCACTGGAGTACTCATTAA+TGG + Chr4:65469019-65469038 None:intergenic 40.0%
! TGTGTTGACCGAGTCAAAAT+TGG - Chr4:65468783-65468802 MsG0480021876.01.T01:intron 40.0%
! TTCCTTGAGGTGATGTTTTC+AGG + Chr4:65467003-65467022 None:intergenic 40.0%
!! ATTTTGAGTGGCTGGTTGAA+AGG + Chr4:65467740-65467759 None:intergenic 40.0%
!! GATTTGTTATCAGACTGACG+TGG + Chr4:65465685-65465704 MsG0480021875.01.T01:intron 40.0%
!! TGGTTGAAAGGCATTTGCAT+TGG + Chr4:65467728-65467747 None:intergenic 40.0%
!! TTACATTGGCTCCATTGGAT+TGG + Chr4:65467663-65467682 None:intergenic 40.0%
!!! AACTTTTTCACACCCAACTC+AGG - Chr4:65469156-65469175 MsG0480021876.01.T01:intron 40.0%
!!! TAGTTTTTTGTTGTGGGTGG+GGG - Chr4:65468338-65468357 MsG0480021876.01.T01:intron 40.0%
AACAGGTGGTTGTTGGAACT+GGG + Chr4:65469268-65469287 None:intergenic 45.0%
ACACCAAACTCTCATGACCT+AGG + Chr4:65468208-65468227 None:intergenic 45.0%
ACACTCATCAGCATGCACTT+TGG + Chr4:65466004-65466023 None:intergenic 45.0%
ACGGGGGATGGAAAAACAAA+AGG + Chr4:65467362-65467381 None:intergenic 45.0%
AGTGCTCCTTGTGACATTGT+TGG - Chr4:65467174-65467193 MsG0480021876.01.T01:intron 45.0%
AGTTCCAACAACCACCTGTT+GGG - Chr4:65469268-65469287 MsG0480021876.01.T01:intron 45.0%
CAACGGTGAAGTTTCCAAGT+AGG + Chr4:65469890-65469909 None:intergenic 45.0%
CACAGACACATTCTCCACTT+GGG + Chr4:65470027-65470046 None:intergenic 45.0%
CGGGGGATGGAAAAACAAAA+GGG + Chr4:65467361-65467380 None:intergenic 45.0%
GATATAAGGTGGTTGAGGTG+TGG + Chr4:65468401-65468420 None:intergenic 45.0%
GCCGAATAGATTTCCTGAGT+TGG + Chr4:65469172-65469191 None:intergenic 45.0%
GGACGCATTTCTGCAAGAAT+AGG + Chr4:65470006-65470025 None:intergenic 45.0%
GGTGTGATTGTCAAAAGGGT+GGG - Chr4:65468084-65468103 MsG0480021876.01.T01:intron 45.0%
GTGAATGCTGTATTGCCCAT+TGG - Chr4:65466953-65466972 MsG0480021876.01.T01:intron 45.0%
GTGTAGTTTCAACTGAGCAC+GGG - Chr4:65465783-65465802 MsG0480021876.01.T01:three_prime_UTR 45.0%
GTGTGATTGTCAAAAGGGTG+GGG - Chr4:65468085-65468104 MsG0480021876.01.T01:intron 45.0%
GTTGCAGCACTAACTTTCTG+GGG - Chr4:65469909-65469928 MsG0480021876.01.T01:intron 45.0%
GTTGGTGCATGAATTCCTTG+AGG + Chr4:65467016-65467035 None:intergenic 45.0%
TACTGGTCCTTGTTGAGGTT+GGG - Chr4:65470101-65470120 MsG0480021876.01.T01:intron 45.0%
TCAGGAAATCTATTCGGCAG+TGG - Chr4:65469174-65469193 MsG0480021876.01.T01:intron 45.0%
TCTTCTACTGGTCCTTGTTG+AGG - Chr4:65470096-65470115 MsG0480021876.01.T01:intron 45.0%
TGACCTAGGTCATGAGAGTT+TGG - Chr4:65468202-65468221 MsG0480021876.01.T01:intron 45.0%
TGCCACAGGAGCAAAACTTA+GGG + Chr4:65468570-65468589 None:intergenic 45.0%
TGCTGCCTGAAACATTGTAG+TGG + Chr4:65469310-65469329 None:intergenic 45.0%
TGGTGTGATTGTCAAAAGGG+TGG - Chr4:65468083-65468102 MsG0480021876.01.T01:intron 45.0%
TGTAGTTTCAACTGAGCACG+GGG - Chr4:65465784-65465803 MsG0480021876.01.T01:three_prime_UTR 45.0%
TGTATAGGCATGTGACACAG+CGG - Chr4:65470603-65470622 MsG0480021876.01.T01:intron 45.0%
TTACTTGTGAGTTCTGCCAC+TGG - Chr4:65466885-65466904 MsG0480021876.01.T01:intron 45.0%
! AACAATGTCACAAGGAGCAC+TGG + Chr4:65467175-65467194 None:intergenic 45.0%
! AGTCCACTGCACAACTTTTG+AGG + Chr4:65466581-65466600 None:intergenic 45.0%
! AGTCTCAAGCTTTAGCCAAC+TGG - Chr4:65467774-65467793 MsG0480021876.01.T01:intron 45.0%
! CAGCGGTTAGGCGTATTTTT+AGG - Chr4:65470620-65470639 MsG0480021876.01.T01:intron 45.0%
! CCGAGTCAAAATTGGCTTAG+GGG - Chr4:65468791-65468810 MsG0480021876.01.T01:CDS 45.0%
! CGAGTCAAAATTGGCTTAGG+GGG - Chr4:65468792-65468811 MsG0480021876.01.T01:CDS 45.0%
! GACCGAGTCAAAATTGGCTT+AGG - Chr4:65468789-65468808 MsG0480021876.01.T01:CDS 45.0%
! GTCTCAAGCTTTAGCCAACT+GGG - Chr4:65467775-65467794 MsG0480021876.01.T01:intron 45.0%
! GTGTTATTGAACCCAACAGG+TGG + Chr4:65469282-65469301 None:intergenic 45.0%
! TTTTGCTCCTGTGGCAGTTT+TGG - Chr4:65468574-65468593 MsG0480021876.01.T01:intron 45.0%
!! GGCATTTACATTGGCTCCAT+TGG + Chr4:65467668-65467687 None:intergenic 45.0%
!! GTTTTGAGTGGCTGGTTGAA+AGG + Chr4:65467689-65467708 None:intergenic 45.0%
!! TTGCATTGGCTCCATTGGAT+TGG + Chr4:65467714-65467733 None:intergenic 45.0%
!!! AGACGTCAGAGGCATTTTGT+AGG + Chr4:65467620-65467639 None:intergenic 45.0%
!!! CCCCTAAGCCAATTTTGACT+CGG + Chr4:65468794-65468813 None:intergenic 45.0%
!!! GACGTCAGAGGCATTTTGTA+GGG + Chr4:65467619-65467638 None:intergenic 45.0%
!!! GATTGGAAGTTTTGAGTGGC+TGG + Chr4:65467697-65467716 None:intergenic 45.0%
!!! GGACCATTATTTTGAGTGGC+TGG + Chr4:65467748-65467767 None:intergenic 45.0%
AATGCTCAAGGTCAATGGGC+TGG + Chr4:65469508-65469527 None:intergenic 50.0%
ACAGTGTAGGTGTTTAGGCC+TGG + Chr4:65465882-65465901 None:intergenic 50.0%
ACGTTGAGAGAAGACGTCAG+AGG + Chr4:65467631-65467650 None:intergenic 50.0%
ATACATACCTCCGCCTCCAA+TGG + Chr4:65469050-65469069 None:intergenic 50.0%
ATGGGCAACGAGAAATGAGG+AGG - Chr4:65470683-65470702 MsG0480021876.01.T01:intron 50.0%
CAACAGGTGGTTGTTGGAAC+TGG + Chr4:65469269-65469288 None:intergenic 50.0%
CAACCACCTTATATCTCCCC+AGG - Chr4:65468406-65468425 MsG0480021876.01.T01:intron 50.0%
CAGTTCCAACAACCACCTGT+TGG - Chr4:65469267-65469286 MsG0480021876.01.T01:intron 50.0%
CCAAGTGGAGAATGTGTCTG+TGG - Chr4:65470025-65470044 MsG0480021876.01.T01:intron 50.0%
CCACAGACACATTCTCCACT+TGG + Chr4:65470028-65470047 None:intergenic 50.0%
CCACAGGAGCAAAACTTAGG+GGG + Chr4:65468568-65468587 None:intergenic 50.0%
CTACTGGTCCTTGTTGAGGT+TGG - Chr4:65470100-65470119 MsG0480021876.01.T01:intron 50.0%
CTATGAGGAATTACGGGCAG+CGG - Chr4:65467206-65467225 MsG0480021876.01.T01:intron 50.0%
CTATTCGGCAGTGGAATCTC+AGG - Chr4:65469183-65469202 MsG0480021876.01.T01:intron 50.0%
CTGCCACAGGAGCAAAACTT+AGG + Chr4:65468571-65468590 None:intergenic 50.0%
GCCACAGGAGCAAAACTTAG+GGG + Chr4:65468569-65468588 None:intergenic 50.0%
GGAGAAATGGAATCCTGGAG+AGG - Chr4:65470067-65470086 MsG0480021876.01.T01:intron 50.0%
GGAGTATGAGTGGAGGGATA+AGG + Chr4:65468379-65468398 None:intergenic 50.0%
GGGCAATACAGCATTCACTC+CGG + Chr4:65466951-65466970 None:intergenic 50.0%
GGGGAGATATAAGGTGGTTG+AGG + Chr4:65468406-65468425 None:intergenic 50.0%
GGTTGCATCACACCTCTACA+GGG - Chr4:65468011-65468030 MsG0480021876.01.T01:intron 50.0%
GTATGAGTGGAGGGATAAGG+AGG + Chr4:65468376-65468395 None:intergenic 50.0%
TCTTCATCCAAGCCCCAGAA+CGG - Chr4:65465655-65465674 MsG0480021876.01.T01:three_prime_UTR 50.0%
TGAACCCAACAGGTGGTTGT+TGG + Chr4:65469275-65469294 None:intergenic 50.0%
TGACCGAGTCAATTGCCCTA+GGG + Chr4:65468602-65468621 None:intergenic 50.0%
TGCCACAGGGGCAAAACTTA+GGG - Chr4:65468822-65468841 MsG0480021876.01.T01:CDS 50.0%
TGGAACTGGGAAGTAGAACC+TGG + Chr4:65469255-65469274 None:intergenic 50.0%
TGGAGGGATAAGGAGGTTGT+GGG + Chr4:65468369-65468388 None:intergenic 50.0%
TGGATGGGCAACGAGAAATG+AGG - Chr4:65470680-65470699 MsG0480021876.01.T01:intron 50.0%
TGGTTGCATCACACCTCTAC+AGG - Chr4:65468010-65468029 MsG0480021876.01.T01:intron 50.0%
TTGACCGAGTCAATTGCCCT+AGG + Chr4:65468603-65468622 None:intergenic 50.0%
TTGCAGAAATGCGTCCCAAG+TGG - Chr4:65470010-65470029 MsG0480021876.01.T01:intron 50.0%
TTGGTAGAGATGCTGGAAGC+AGG - Chr4:65469797-65469816 MsG0480021876.01.T01:intron 50.0%
! AAGGGATTAGCAAGGGCTTG+AGG + Chr4:65466690-65466709 None:intergenic 50.0%
! ATGCTCAAGGTCAATGGGCT+GGG + Chr4:65469507-65469526 None:intergenic 50.0%
! CTATCTGGAGGAGCTTGTTC+TGG + Chr4:65470563-65470582 None:intergenic 50.0%
! CTTAAGGTATCCTCCAGACG+GGG + Chr4:65467379-65467398 None:intergenic 50.0%
! GCTTAAGGTATCCTCCAGAC+GGG + Chr4:65467380-65467399 None:intergenic 50.0%
! GGCTTAAGGTATCCTCCAGA+CGG + Chr4:65467381-65467400 None:intergenic 50.0%
! TTAAGGTATCCTCCAGACGG+GGG + Chr4:65467378-65467397 None:intergenic 50.0%
! TTGAGGTGTGGGAGTATGAG+TGG + Chr4:65468389-65468408 None:intergenic 50.0%
! TTTTGCCCCTGTGGCAGTTT+TGG + Chr4:65468818-65468837 None:intergenic 50.0%
!! CACTGAACCCTGGCTTTGAA+AGG - Chr4:65467803-65467822 MsG0480021876.01.T01:intron 50.0%
!! GGCATTTGCATTGGCTCCAT+TGG + Chr4:65467719-65467738 None:intergenic 50.0%
!! TTGTTTTTCCATCCCCCGTC+TGG - Chr4:65467363-65467382 MsG0480021876.01.T01:CDS 50.0%
AACCCCGCTGGTGTAGGAAA+GGG + Chr4:65469222-65469241 None:intergenic 55.0%
AACCCCTTTCCTACACCAGC+GGG - Chr4:65469216-65469235 MsG0480021876.01.T01:intron 55.0%
AAGTTCGAGACCTGGGACCT+GGG + Chr4:65468426-65468445 None:intergenic 55.0%
ACCGAGTCAATTGCCCTAGG+GGG + Chr4:65468600-65468619 None:intergenic 55.0%
AGGCATGTGACACAGCGGTT+AGG - Chr4:65470608-65470627 MsG0480021876.01.T01:intron 55.0%
ATCTGGTGCTTGCAAGCCTC+AGG + Chr4:65466360-65466379 None:intergenic 55.0%
ATTACGGGCAGCGGCTTATG+AGG - Chr4:65467215-65467234 MsG0480021876.01.T01:intron 55.0%
CAACCCCTTTCCTACACCAG+CGG - Chr4:65469215-65469234 MsG0480021876.01.T01:intron 55.0%
CAGCCTAGTTCCATTGGAGG+CGG - Chr4:65469037-65469056 MsG0480021876.01.T01:CDS 55.0%
CAGGAGCAAAACTTAGGGGG+CGG + Chr4:65468565-65468584 None:intergenic 55.0%
CCAATGGAACTAGGCTGCAC+TGG + Chr4:65469034-65469053 None:intergenic 55.0%
CCACAGGGGCAAAACTTAGG+GGG - Chr4:65468824-65468843 MsG0480021876.01.T01:CDS 55.0%
CCAGTGCAGCCTAGTTCCAT+TGG - Chr4:65469031-65469050 MsG0480021876.01.T01:CDS 55.0%
CTGCCACAGGGGCAAAACTT+AGG - Chr4:65468821-65468840 MsG0480021876.01.T01:CDS 55.0%
CTGGGACCTGGGGAGATATA+AGG + Chr4:65468415-65468434 None:intergenic 55.0%
CTTATATCTCCCCAGGTCCC+AGG - Chr4:65468413-65468432 MsG0480021876.01.T01:intron 55.0%
GACCGAGTCAATTGCCCTAG+GGG + Chr4:65468601-65468620 None:intergenic 55.0%
GCCACAGGGGCAAAACTTAG+GGG - Chr4:65468823-65468842 MsG0480021876.01.T01:CDS 55.0%
GGACCTGGGGAGATATAAGG+TGG + Chr4:65468412-65468431 None:intergenic 55.0%
GGGAAGCAAGTTCGAGACCT+GGG + Chr4:65468433-65468452 None:intergenic 55.0%
GGGAGGGGAAACACAAGAGA+TGG + Chr4:65466137-65466156 None:intergenic 55.0%
GTGCAGCCTAGTTCCATTGG+AGG - Chr4:65469034-65469053 MsG0480021876.01.T01:CDS 55.0%
GTGGAGGGATAAGGAGGTTG+TGG + Chr4:65468370-65468389 None:intergenic 55.0%
TAGAGATGCTGGAAGCAGGC+AGG - Chr4:65469801-65469820 MsG0480021876.01.T01:intron 55.0%
TCAACTGAGCACGGGGAACA+TGG - Chr4:65465791-65465810 MsG0480021876.01.T01:three_prime_UTR 55.0%
TGGGAAGCAAGTTCGAGACC+TGG + Chr4:65468434-65468453 None:intergenic 55.0%
TTCGGCAGTGGAATCTCAGG+TGG - Chr4:65469186-65469205 MsG0480021876.01.T01:intron 55.0%
! ACTGTGAACTGACTGGCCAG+TGG + Chr4:65466904-65466923 None:intergenic 55.0%
! AGGTGTGGGAGTATGAGTGG+AGG + Chr4:65468386-65468405 None:intergenic 55.0%
! CCCCCTAAGTTTTGCTCCTG+TGG - Chr4:65468565-65468584 MsG0480021876.01.T01:intron 55.0%
! GGTGTGGGAGTATGAGTGGA+GGG + Chr4:65468385-65468404 None:intergenic 55.0%
! GGTTCAGTGAAGCACCCAGT+TGG + Chr4:65467792-65467811 None:intergenic 55.0%
! TTTTTCCATCCCCCGTCTGG+AGG - Chr4:65467366-65467385 MsG0480021876.01.T01:CDS 55.0%
!! TGACTCGGTCAACACACACG+TGG + Chr4:65468779-65468798 None:intergenic 55.0%
ACCCCGCTGGTGTAGGAAAG+GGG + Chr4:65469221-65469240 None:intergenic 60.0%
ACCCCTTTCCTACACCAGCG+GGG - Chr4:65469217-65469236 MsG0480021876.01.T01:intron 60.0%
AGGGGGCCAAAACTGCCACA+GGG - Chr4:65468809-65468828 MsG0480021876.01.T01:CDS 60.0%
AGTTCGAGACCTGGGACCTG+GGG + Chr4:65468425-65468444 None:intergenic 60.0%
CAACCCCGCTGGTGTAGGAA+AGG + Chr4:65469223-65469242 None:intergenic 60.0%
CAAGTTCGAGACCTGGGACC+TGG + Chr4:65468427-65468446 None:intergenic 60.0%
CAGGGGCAAAACTTAGGGGG+CGG - Chr4:65468827-65468846 MsG0480021876.01.T01:CDS 60.0%
CCTAGTTCCATTGGAGGCGG+AGG - Chr4:65469040-65469059 MsG0480021876.01.T01:intron 60.0%
CCTCCGCCTCCAATGGAACT+AGG + Chr4:65469043-65469062 None:intergenic 60.0%
CTACACCAGCGGGGTTGACA+GGG - Chr4:65469226-65469245 MsG0480021876.01.T01:intron 60.0%
CTGGGTGCTTCACTGAACCC+TGG - Chr4:65467793-65467812 MsG0480021876.01.T01:intron 60.0%
GCCCCCTAGGGCAATTGACT+CGG - Chr4:65468596-65468615 MsG0480021876.01.T01:intron 60.0%
TAGGGGGCCAAAACTGCCAC+AGG - Chr4:65468808-65468827 MsG0480021876.01.T01:CDS 60.0%
TAGGGGGCCAAAACTGCCAC+AGG + Chr4:65468827-65468808 None:intergenic 60.0%
! CCCCCTAAGTTTTGCCCCTG+TGG + Chr4:65468827-65468846 None:intergenic 60.0%
!! ACTGACGTGGAGTGCCGTTC+TGG + Chr4:65465672-65465691 MsG0480021875.01.T01:intron 60.0%
!! CTGACGTGGAGTGCCGTTCT+GGG + Chr4:65465671-65465690 MsG0480021875.01.T01:intron 60.0%
!! GTGGCAGTTTTGGCCCCCTA+GGG - Chr4:65468584-65468603 MsG0480021876.01.T01:intron 60.0%
!! TGACGTGGAGTGCCGTTCTG+GGG + Chr4:65465670-65465689 MsG0480021875.01.T01:intron 60.0%
!! TGTGGCAGTTTTGGCCCCCT+AGG - Chr4:65468583-65468602 MsG0480021876.01.T01:intron 60.0%
CCTACACCAGCGGGGTTGAC+AGG - Chr4:65469225-65469244 MsG0480021876.01.T01:intron 65.0%
CCTGTCAACCCCGCTGGTGT+AGG + Chr4:65469228-65469247 None:intergenic 65.0%
GCGGGGTTGACAGGGTTTCC+AGG - Chr4:65469234-65469253 MsG0480021876.01.T01:intron 65.0%
GGAAACCCTGTCAACCCCGC+TGG + Chr4:65469234-65469253 None:intergenic 65.0%
GGGGGCCAAAACTGCCACAG+GGG - Chr4:65468810-65468829 MsG0480021876.01.T01:CDS 65.0%
GGTATCCTCCAGACGGGGGA+TGG + Chr4:65467374-65467393 None:intergenic 65.0%
!! TGGAGTGCCGTTCTGGGGCT+TGG + Chr4:65465665-65465684 MsG0480021875.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 65465619 65470991 65465619 ID=MsG0480021876.01;Name=MsG0480021876.01
Chr4 mRNA 65465619 65470991 65465619 ID=MsG0480021876.01.T01;Parent=MsG0480021876.01;Name=MsG0480021876.01.T01;_AED=0.41;_eAED=0.41;_QI=0|1|0.87|1|1|0.87|8|396|307
Chr4 exon 65465619 65466053 65465619 ID=MsG0480021876.01.T01:exon:7951;Parent=MsG0480021876.01.T01
Chr4 exon 65466522 65466594 65466522 ID=MsG0480021876.01.T01:exon:7950;Parent=MsG0480021876.01.T01
Chr4 exon 65467267 65467456 65467267 ID=MsG0480021876.01.T01:exon:7949;Parent=MsG0480021876.01.T01
Chr4 exon 65467549 65467604 65467549 ID=MsG0480021876.01.T01:exon:7948;Parent=MsG0480021876.01.T01
Chr4 exon 65468786 65469057 65468786 ID=MsG0480021876.01.T01:exon:7947;Parent=MsG0480021876.01.T01
Chr4 exon 65469341 65469434 65469341 ID=MsG0480021876.01.T01:exon:7946;Parent=MsG0480021876.01.T01
Chr4 exon 65470168 65470263 65470168 ID=MsG0480021876.01.T01:exon:7945;Parent=MsG0480021876.01.T01
Chr4 exon 65470888 65470991 65470888 ID=MsG0480021876.01.T01:exon:7944;Parent=MsG0480021876.01.T01
Chr4 CDS 65470888 65470991 65470888 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 CDS 65470168 65470263 65470168 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 CDS 65469341 65469434 65469341 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 CDS 65468786 65469057 65468786 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 CDS 65467549 65467604 65467549 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 CDS 65467267 65467456 65467267 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 CDS 65466522 65466594 65466522 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 CDS 65466015 65466053 65466015 ID=MsG0480021876.01.T01:cds;Parent=MsG0480021876.01.T01
Chr4 three_prime_UTR 65465619 65466014 65465619 ID=MsG0480021876.01.T01:three_prime_utr;Parent=MsG0480021876.01.T01
Gene Sequence

>MsG0480021876.01.T01

ATGAATCAGCCCCTTGAAAACAACAAATGGAGTCGGTCTTCATCCAAGCCCCAGAACGGCACTCCACGTCAGTCTGATAACAAATCTCAAACAGTGAATCATAAATGTACAGATCCTGAGGCTTGCAAGCACCAGATTGTAGAAGATTTTCAGCAAGAGAAACCACTTTGGATTCTTACATGCTATGGTCACTGTAAAGGTGCTCCTTGTGACATTGTTGGAGATATTAGCTATGAGGAATTACGGGCAGCGGCTTATGAGGATAATAAGAAAGGAATGAGTTTGCCACAAATTGTTGAGAAAGAGAAAAACATATTACAATCCAAGTTGGTTGAGTTTAACAAACTACTTTCTGAACCCTACAAAATGCCTCTGACGTCTTCTCTCAACGTTCAAAACTTCCAATCCAATGGAGCCAATGTAAATGCCTTTCAACCAGCCACTCAAAACTTCCAATCCAATGGAGCCAATGCAAATGCCTTTCAACCAGCCACTCAAAATAATGGTCCTTTATCAGTCTCAAGCTTTAGCCAACTGGGTGCTTCACTGAACCCTGGCTTTGAAAGGCCCTCTGCACCATTAATGAGTACTCCAGTGCAGCCTAGTTCCATTGGAGGCGGAGGAAACTTTTTCACACCCAACTCAGGAAATCTATTCGGCAGTGGAATCTCAGGTGGTCAAATCAACCCCTTTCCTACACCAGCGGGGTTGACAGGGTTTCCAGGTTCTACTTCCCAGTTCCAACAACCACCTGTTGGGTTCAATAACACTAGCTCCACTACAATGTTTCAGGCAGCACCAGATGTTCAGTTAAATGCGTCCCAAGTGGAGAATGTGTCTGTGGATGATAGTATCTGGTTAAAGGAGAAATGGAATCCTGGAGAGATTCCAGAACAAGCTCCTCCAGATAGATTTGTTTGGTAG

Protein sequence

>MsG0480021876.01.T01

MNQPLENNKWSRSSSKPQNGTPRQSDNKSQTVNHKCTDPEACKHQIVEDFQQEKPLWILTCYGHCKGAPCDIVGDISYEELRAAAYEDNKKGMSLPQIVEKEKNILQSKLVEFNKLLSEPYKMPLTSSLNVQNFQSNGANVNAFQPATQNFQSNGANANAFQPATQNNGPLSVSSFSQLGASLNPGFERPSAPLMSTPVQPSSIGGGGNFFTPNSGNLFGSGISGGQINPFPTPAGLTGFPGSTSQFQQPPVGFNNTSSTTMFQAAPDVQLNASQVENVSVDDSIWLKEKWNPGEIPEQAPPDRFVW*