AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014175.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014175.01.T01 MTR_3g052260 81.735 219 4 3 1 219 1 183 2.72e-121 342
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014175.01.T01 AT4G26965 47.032 219 81 3 1 219 1 184 3.11e-60 187
MsG0380014175.01.T01 AT4G26965 46.154 182 63 3 38 219 1 147 3.09e-43 142

Find 56 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAGATGGGTGGTGTTTA+AGG 0.097388 3:-50896556 MsG0380014175.01.T01:CDS
ACCATCAATTTGTTCATTTC+TGG 0.124667 3:+50897738 None:intergenic
CCTGACTCTACTTCCTTCTT+TGG 0.206566 3:+50893992 None:intergenic
GGTTGAATGGGCAGCGTAAA+AGG 0.231907 3:-50896371 MsG0380014175.01.T01:CDS
TTGGAATATAACGTTGATTC+TGG 0.241713 3:+50897949 None:intergenic
AGGGTACTTGGGAAGATTAC+TGG 0.298626 3:-50897817 MsG0380014175.01.T01:CDS
ATTAGAACACACAACAAGTT+TGG 0.320829 3:+50897930 None:intergenic
GTTGGAGGTTGCCATGTTCC+AGG 0.325336 3:+50892531 None:intergenic
ACCAGAAATGAACAAATTGA+TGG 0.357823 3:-50897739 MsG0380014175.01.T01:CDS
AAGAGATGGGTGGTGTTTAA+GGG 0.371563 3:-50896555 MsG0380014175.01.T01:CDS
GTTTCAGGAACAGATGGAAT+TGG 0.393307 3:-50894273 MsG0380014175.01.T01:intron
ATGGCTGGTGTGGATAAAAC+TGG 0.401451 3:-50897775 MsG0380014175.01.T01:CDS
TTCAGGACTTCAGAGCCAAC+AGG 0.416235 3:-50892573 MsG0380014175.01.T01:intron
TAACCATTTCATCTTTCTGC+AGG 0.434862 3:-50893051 MsG0380014175.01.T01:CDS
TCCTAGTGAAAGAGAAGAGA+TGG 0.447561 3:-50896569 MsG0380014175.01.T01:intron
CATGATCCTACATCCATTCC+AGG 0.453705 3:-50896528 MsG0380014175.01.T01:intron
GAATGGATATGTTGGTTGAA+TGG 0.457830 3:-50896384 MsG0380014175.01.T01:CDS
ACTCCTGCAGAAAGATGAAA+TGG 0.465970 3:+50893048 None:intergenic
TTTCAATTTACCTCTGGAGT+TGG 0.471997 3:+50896345 None:intergenic
AATGGATATGTTGGTTGAAT+GGG 0.479178 3:-50896383 MsG0380014175.01.T01:CDS
TGACTACCTTCGGAAGAAAC+CGG 0.488607 3:+50893820 None:intergenic
GTTGTTCACCAATCGAACTA+TGG 0.489049 3:-50897794 MsG0380014175.01.T01:CDS
ACTTCAGAGCCAACAGGGTC+AGG 0.493398 3:-50892567 MsG0380014175.01.T01:CDS
CATAAAATATATACCTGGAA+TGG 0.499350 3:+50896515 None:intergenic
CCAAAGAAGGAAGTAGAGTC+AGG 0.502701 3:-50893992 MsG0380014175.01.T01:CDS
CTCAAGTCATCCCTTGTGCC+AGG 0.509785 3:+50893601 None:intergenic
CAGTTTCCGGTTTCTTCCGA+AGG 0.522530 3:-50893826 MsG0380014175.01.T01:intron
TTCACCAATCGAACTATGGC+TGG 0.525835 3:-50897790 MsG0380014175.01.T01:CDS
TATATACCTGGAATGGATGT+AGG 0.527072 3:+50896522 None:intergenic
GTTGAATGGGCAGCGTAAAA+GGG 0.537561 3:-50896370 MsG0380014175.01.T01:CDS
AGTTCTCAAGAAAGAAGAAG+AGG 0.538559 3:-50894024 MsG0380014175.01.T01:CDS
GGGTACTTGGGAAGATTACT+GGG 0.540612 3:-50897816 MsG0380014175.01.T01:CDS
GAGGAAAGGAAAGCCAAAGA+AGG 0.545436 3:-50894005 MsG0380014175.01.T01:CDS
CACACCAGCCATAGTTCGAT+TGG 0.548606 3:+50897786 None:intergenic
CAATCGAACTATGGCTGGTG+TGG 0.548825 3:-50897785 MsG0380014175.01.T01:CDS
CACAAGGGATGACTTGAGGT+TGG 0.555874 3:-50893596 MsG0380014175.01.T01:CDS
TTATTCGTTTCAGGAACAGA+TGG 0.571562 3:-50894279 MsG0380014175.01.T01:intron
TCAAGAAAGAAGAAGAGGAA+AGG 0.573085 3:-50894019 MsG0380014175.01.T01:CDS
TTGAAGAATCACCTGGCACA+AGG 0.573819 3:-50893612 MsG0380014175.01.T01:CDS
TTGATGAAAGTTCAAGTTGG+AGG 0.577002 3:+50892516 None:intergenic
TGATTGATGAAAGTTCAAGT+TGG 0.581094 3:+50892513 None:intergenic
GTCAGGCGTGTCGTCAACAC+TGG 0.592271 3:-50893975 MsG0380014175.01.T01:intron
AAAGATGCACCTGACCCTGT+TGG 0.594591 3:+50892558 None:intergenic
CCTAGTGAAAGAGAAGAGAT+GGG 0.599846 3:-50896568 MsG0380014175.01.T01:intron
TTTATTTATTTATTTATTGG+GGG 0.601026 3:+50897847 None:intergenic
AACGAGGTTGAAGAATCACC+TGG 0.620751 3:-50893619 MsG0380014175.01.T01:CDS
CTGGCACAAGGGATGACTTG+AGG 0.632013 3:-50893600 MsG0380014175.01.T01:CDS
TCCATTGTAGGAAACGCTAG+TGG 0.650147 3:-50893874 MsG0380014175.01.T01:intron
TCAGGACTTCAGAGCCAACA+GGG 0.651356 3:-50892572 MsG0380014175.01.T01:intron
GGGGTAAAGAAATTCAATTG+TGG 0.655027 3:+50897866 None:intergenic
GTGGTACAGTGACAGCATCA+TGG 0.664664 3:+50897885 None:intergenic
TAAAAGGGCTCCAACTCCAG+AGG 0.675471 3:-50896355 MsG0380014175.01.T01:intron
TTTCTTTAATATAGGTAACG+AGG 0.678560 3:-50893635 MsG0380014175.01.T01:intron
TGAAGAATCACCTGGCACAA+GGG 0.690362 3:-50893611 MsG0380014175.01.T01:CDS
TGGCTGGTGTGGATAAAACT+GGG 0.698720 3:-50897774 MsG0380014175.01.T01:CDS
AGTGAAAGAGAAGAGATGGG+TGG 0.731002 3:-50896565 MsG0380014175.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTTATTTATTTAT+TGG + Chr3:50892644-50892663 None:intergenic 0.0%
!!! TTTTTATTTATTTATTTATT+GGG + Chr3:50892643-50892662 None:intergenic 0.0%
!! TTAAAAGTTTAAATTCAATA+GGG + Chr3:50893670-50893689 None:intergenic 10.0%
!! TTTATTTATTTATTTATTGG+GGG + Chr3:50892641-50892660 None:intergenic 10.0%
!!! TATTACTAAAAAAATGATTT+TGG - Chr3:50897538-50897557 MsG0380014175.01.T01:intron 10.0%
!!! TGATTTTCTTAAATTATTAA+CGG - Chr3:50895631-50895650 MsG0380014175.01.T01:intron 10.0%
!! AATGAAAATCCATTAAATTA+AGG + Chr3:50897077-50897096 None:intergenic 15.0%
!! ACATTTACTTTCTTTAATAT+AGG - Chr3:50896842-50896861 MsG0380014175.01.T01:intron 15.0%
!! ATTTAACGATTTATTCAATA+AGG - Chr3:50894397-50894416 MsG0380014175.01.T01:intron 15.0%
!! CTTAAAAGTTTAAATTCAAT+AGG + Chr3:50893671-50893690 None:intergenic 15.0%
!! TTAATTGTTCTTATATTCTA+CGG - Chr3:50893296-50893315 MsG0380014175.01.T01:intron 15.0%
!! TTCAAAAAATTTGATAGATA+AGG + Chr3:50896296-50896315 None:intergenic 15.0%
!!! AATAATTTAACTTTGACAAA+AGG + Chr3:50896744-50896763 None:intergenic 15.0%
!!! ATCTTTTTTCCTTAATTTAA+TGG - Chr3:50897065-50897084 MsG0380014175.01.T01:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - Chr3:50893032-50893051 MsG0380014175.01.T01:CDS 15.0%
!!! TGAATTTAAACTTTTAAGAA+GGG - Chr3:50893673-50893692 MsG0380014175.01.T01:intron 15.0%
!!! TGTTAATTATTTTAGTTGAA+TGG - Chr3:50894084-50894103 MsG0380014175.01.T01:intron 15.0%
!!! TTGAATTTAAACTTTTAAGA+AGG - Chr3:50893672-50893691 MsG0380014175.01.T01:intron 15.0%
!! AAAAAATTTGATAGATAAGG+TGG + Chr3:50896293-50896312 None:intergenic 20.0%
!! AAATATCTAAACAAAAGGAT+TGG + Chr3:50897114-50897133 None:intergenic 20.0%
!! ATAAATAAATAAAAATGCGG+AGG - Chr3:50892648-50892667 MsG0380014175.01.T01:intron 20.0%
!! ATTAAAATCAATATAGTCAC+TGG + Chr3:50897208-50897227 None:intergenic 20.0%
!! ATTCTATTTCGTATTATTGA+TGG - Chr3:50894053-50894072 MsG0380014175.01.T01:CDS 20.0%
!! CATGAAAATATCTAAACAAA+AGG + Chr3:50897119-50897138 None:intergenic 20.0%
!! CTAAGCGAAATTATTATTTA+TGG - Chr3:50896164-50896183 MsG0380014175.01.T01:intron 20.0%
!! CTAATTTATATTTCCATTGT+AGG - Chr3:50896599-50896618 MsG0380014175.01.T01:intron 20.0%
!! CTTTGAACTTTAATTGTTAT+TGG - Chr3:50897336-50897355 MsG0380014175.01.T01:intron 20.0%
!! GAAAAATAAATTAAAGATGG+TGG + Chr3:50895388-50895407 None:intergenic 20.0%
!! GCTGAAAAATAAATTAAAGA+TGG + Chr3:50895391-50895410 None:intergenic 20.0%
!! TAAACACAAGCATATATTAA+AGG + Chr3:50892808-50892827 None:intergenic 20.0%
!! TAAATAAATAAAAATGCGGA+GGG - Chr3:50892649-50892668 MsG0380014175.01.T01:intron 20.0%
!! TAATATATGCTTGTGTTTAT+TGG - Chr3:50892809-50892828 MsG0380014175.01.T01:intron 20.0%
!! TAATGATATGAACTATATGA+GGG + Chr3:50897857-50897876 None:intergenic 20.0%
!! TTTCCTTTATAAAATAGTTC+AGG - Chr3:50897394-50897413 MsG0380014175.01.T01:intron 20.0%
!!! AATGTAACATTTTAAAACCA+TGG - Chr3:50893799-50893818 MsG0380014175.01.T01:intron 20.0%
!!! AATTCTGAGATAATCTTTTT+AGG - Chr3:50897569-50897588 MsG0380014175.01.T01:intron 20.0%
!!! ATTCAATAAGGACAAAATTT+TGG - Chr3:50894409-50894428 MsG0380014175.01.T01:intron 20.0%
!!! ATTCTGAGATAATCTTTTTA+GGG - Chr3:50897570-50897589 MsG0380014175.01.T01:intron 20.0%
!!! ATTTAATAGTTGATACAAAG+AGG + Chr3:50895306-50895325 None:intergenic 20.0%
!!! ATTTGGTAATACTTTGAAAA+AGG - Chr3:50893337-50893356 MsG0380014175.01.T01:intron 20.0%
!!! ATTTTTCTTTACTTACTCTT+AGG - Chr3:50896568-50896587 MsG0380014175.01.T01:intron 20.0%
!!! TTATGGGTTTTATTGATTTT+TGG - Chr3:50892834-50892853 MsG0380014175.01.T01:intron 20.0%
!!! TTTGGTAATACTTTGAAAAA+GGG - Chr3:50893338-50893357 MsG0380014175.01.T01:intron 20.0%
! AAAAATGTGAATCTGATAGA+AGG + Chr3:50897640-50897659 None:intergenic 25.0%
! AAATAATAATTTCGCTTAGC+TGG + Chr3:50896163-50896182 None:intergenic 25.0%
! AACTTGAATCAAACATATAC+TGG - Chr3:50896770-50896789 MsG0380014175.01.T01:intron 25.0%
! AAGGAAAAAAGATATGAGAA+AGG + Chr3:50897058-50897077 None:intergenic 25.0%
! AAGTTTAAATTCAATAGGGT+TGG + Chr3:50893666-50893685 None:intergenic 25.0%
! AGCAAAATGTTATCAAATAG+TGG - Chr3:50894340-50894359 MsG0380014175.01.T01:intron 25.0%
! AGGACGATTACTAAAAAAAA+AGG - Chr3:50896033-50896052 MsG0380014175.01.T01:intron 25.0%
! AGTAAAATAAGTAAGAACCA+TGG + Chr3:50893819-50893838 None:intergenic 25.0%
! ATCACATGTATTAATAGATG+TGG + Chr3:50894035-50894054 None:intergenic 25.0%
! CATAAAATATATACCTGGAA+TGG + Chr3:50893973-50893992 None:intergenic 25.0%
! CATAGTAATGATTCTACTTA+GGG + Chr3:50897178-50897197 None:intergenic 25.0%
! CATTCTGTTCTTGTAATATT+CGG - Chr3:50894768-50894787 MsG0380014175.01.T01:intron 25.0%
! CTAACATTAAAACCTATTAG+AGG - Chr3:50895101-50895120 MsG0380014175.01.T01:intron 25.0%
! CTGATAGGAATTTAAGAAAA+TGG - Chr3:50893109-50893128 MsG0380014175.01.T01:intron 25.0%
! CTTCATTAATTGTAATCTGT+TGG - Chr3:50897877-50897896 MsG0380014175.01.T01:five_prime_UTR 25.0%
! CTTGTGTTTATTGGATTTAT+GGG - Chr3:50892818-50892837 MsG0380014175.01.T01:intron 25.0%
! GAAGTTAATTTCAGAATGAA+CGG + Chr3:50894960-50894979 None:intergenic 25.0%
! GTAATGATATGAACTATATG+AGG + Chr3:50897858-50897877 None:intergenic 25.0%
! TAATTTGGTATCCCTTTAAA+AGG - Chr3:50896013-50896032 MsG0380014175.01.T01:intron 25.0%
! TCATAGTAATGATTCTACTT+AGG + Chr3:50897179-50897198 None:intergenic 25.0%
! TCGTTATATTGCTATAACAT+AGG - Chr3:50894274-50894293 MsG0380014175.01.T01:intron 25.0%
! TCTTAAATTATTAACGGTGT+CGG - Chr3:50895637-50895656 MsG0380014175.01.T01:intron 25.0%
! TGAATTGGAAGAAAATTTCA+TGG - Chr3:50895936-50895955 MsG0380014175.01.T01:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + Chr3:50895606-50895625 None:intergenic 25.0%
! TTCTCTGAATATTACTTAGA+GGG - Chr3:50894666-50894685 MsG0380014175.01.T01:intron 25.0%
! TTGATAAAAATATAGCGTTC+CGG - Chr3:50895797-50895816 MsG0380014175.01.T01:intron 25.0%
! TTTAGTAATATGTCACAAAC+TGG + Chr3:50897528-50897547 None:intergenic 25.0%
! TTTCTCTGAATATTACTTAG+AGG - Chr3:50894665-50894684 MsG0380014175.01.T01:intron 25.0%
! TTTCTTTAATATAGGTAACG+AGG - Chr3:50896850-50896869 MsG0380014175.01.T01:intron 25.0%
!! AAATGACATTCTTTTGTTGA+AGG - Chr3:50897249-50897268 MsG0380014175.01.T01:intron 25.0%
!! ACTCCTGAACTATTTTATAA+AGG + Chr3:50897400-50897419 None:intergenic 25.0%
!! CATTCCAGGTATATATTTTA+TGG - Chr3:50893971-50893990 MsG0380014175.01.T01:intron 25.0%
!! TTAGTAATCGTCCTTTTAAA+GGG + Chr3:50896027-50896046 None:intergenic 25.0%
!! TTGAACAAATTGCTATTGTT+TGG - Chr3:50894302-50894321 MsG0380014175.01.T01:intron 25.0%
!! TTGGTAATACTTTGAAAAAG+GGG - Chr3:50893339-50893358 MsG0380014175.01.T01:intron 25.0%
!! TTTAGTAATCGTCCTTTTAA+AGG + Chr3:50896028-50896047 None:intergenic 25.0%
!!! ACAAAATTTTGGCTAAGATA+GGG - Chr3:50894420-50894439 MsG0380014175.01.T01:intron 25.0%
!!! ATATCGATTCCTATGATTAA+AGG + Chr3:50895962-50895981 None:intergenic 25.0%
!!! ATTGCTTTTTTATTCGTTTC+AGG - Chr3:50896197-50896216 MsG0380014175.01.T01:intron 25.0%
!!! CGTTTCTGAGATAATATATT+TGG - Chr3:50894921-50894940 MsG0380014175.01.T01:intron 25.0%
!!! TGTCTGATTATACTTGTTTT+TGG - Chr3:50893891-50893910 MsG0380014175.01.T01:intron 25.0%
!!! TTTTAGTTGAATGGATATGT+TGG - Chr3:50894093-50894112 MsG0380014175.01.T01:intron 25.0%
AACTTTCCTCAGTTCATATA+AGG - Chr3:50895212-50895231 MsG0380014175.01.T01:intron 30.0%
AATGCATTTCAATTTACCTC+TGG + Chr3:50894149-50894168 None:intergenic 30.0%
ACCAGAAATGAACAAATTGA+TGG - Chr3:50892746-50892765 MsG0380014175.01.T01:intron 30.0%
ACCTAATTGTATCATCAAAC+CGG + Chr3:50895819-50895838 None:intergenic 30.0%
ACTCTTTCAATCATAAGTGT+TGG - Chr3:50893176-50893195 MsG0380014175.01.T01:intron 30.0%
ATGAGAACAATAAGATTAGC+AGG - Chr3:50895505-50895524 MsG0380014175.01.T01:intron 30.0%
ATTAGAACACACAACAAGTT+TGG + Chr3:50892558-50892577 None:intergenic 30.0%
ATTCTATACAAAGAGACAGA+GGG + Chr3:50895274-50895293 None:intergenic 30.0%
ATTTCATGGCCTTTAATCAT+AGG - Chr3:50895950-50895969 MsG0380014175.01.T01:intron 30.0%
CGTTCAACTGCTAAAATTAT+TGG - Chr3:50894001-50894020 MsG0380014175.01.T01:CDS 30.0%
CGTTCATTCATGATATCATT+TGG - Chr3:50893762-50893781 MsG0380014175.01.T01:intron 30.0%
GATCGAATATAACTGCATAA+AGG - Chr3:50893136-50893155 MsG0380014175.01.T01:intron 30.0%
GCTACCATAAAATATATACC+TGG + Chr3:50893978-50893997 None:intergenic 30.0%
GCTTGTGTTTATTGGATTTA+TGG - Chr3:50892817-50892836 MsG0380014175.01.T01:intron 30.0%
GGTGCTAAAATATACTCATA+TGG - Chr3:50893197-50893216 MsG0380014175.01.T01:intron 30.0%
GTGCATTATAACTAATGCTT+GGG - Chr3:50895234-50895253 MsG0380014175.01.T01:intron 30.0%
TAACCACTATTTAACAACAC+TGG + Chr3:50894249-50894268 None:intergenic 30.0%
TATGAAACACATATACTCCT+CGG - Chr3:50892962-50892981 MsG0380014175.01.T01:intron 30.0%
TCTCTGTATAGAACTAAACT+TGG + Chr3:50896411-50896430 None:intergenic 30.0%
TGAGAACAATAAGATTAGCA+GGG - Chr3:50895506-50895525 MsG0380014175.01.T01:intron 30.0%
TGCGAAACTTATTCATGAAT+TGG - Chr3:50896077-50896096 MsG0380014175.01.T01:intron 30.0%
TGTCACGTTAGTTGTTAATT+TGG - Chr3:50895998-50896017 MsG0380014175.01.T01:intron 30.0%
TTCTCTTTGATCACTAAGAT+TGG + Chr3:50893552-50893571 None:intergenic 30.0%
TTGATACAAAGAGGACATTT+GGG + Chr3:50895297-50895316 None:intergenic 30.0%
! AATGGATATGTTGGTTGAAT+GGG - Chr3:50894102-50894121 MsG0380014175.01.T01:intron 30.0%
! ACCATCAATTTGTTCATTTC+TGG + Chr3:50892750-50892769 None:intergenic 30.0%
! ACTAGATTTTCCTTTTCTCA+GGG - Chr3:50895155-50895174 MsG0380014175.01.T01:intron 30.0%
! CACTCTTAAGGTTTAGAATT+TGG - Chr3:50893320-50893339 MsG0380014175.01.T01:intron 30.0%
! GTTTGATGATACAATTAGGT+GGG - Chr3:50895819-50895838 MsG0380014175.01.T01:intron 30.0%
! TAACATTTTCTTGCAGACTA+AGG - Chr3:50894703-50894722 MsG0380014175.01.T01:intron 30.0%
! TAATACTTTGAAAAAGGGGT+TGG - Chr3:50893343-50893362 MsG0380014175.01.T01:intron 30.0%
!! AGCTTTAAAATGCAATGCTT+TGG - Chr3:50895447-50895466 MsG0380014175.01.T01:intron 30.0%
!! CTTTAAAATGCAATGCTTTG+GGG - Chr3:50895449-50895468 MsG0380014175.01.T01:intron 30.0%
!! GCTTTAAAATGCAATGCTTT+GGG - Chr3:50895448-50895467 MsG0380014175.01.T01:intron 30.0%
!! GTTGGTAAAATTTTGCTTTC+AGG - Chr3:50897895-50897914 MsG0380014175.01.T01:five_prime_UTR 30.0%
!! TTGGAATATAACGTTGATTC+TGG + Chr3:50892539-50892558 None:intergenic 30.0%
!!! ATTTTTGGTGTATGCCAAAA+GGG - Chr3:50892849-50892868 MsG0380014175.01.T01:intron 30.0%
!!! GACAAAATTTTGGCTAAGAT+AGG - Chr3:50894419-50894438 MsG0380014175.01.T01:intron 30.0%
!!! TGCATAAAACTTTTCAAGTC+TGG + Chr3:50896638-50896657 None:intergenic 30.0%
AACAGTAAGATGACTACCTT+CGG + Chr3:50896678-50896697 None:intergenic 35.0%
AAGGTCGTAGTATGTAGTAA+CGG - Chr3:50893384-50893403 MsG0380014175.01.T01:intron 35.0%
AATGCACCTTATATGAACTG+AGG + Chr3:50895221-50895240 None:intergenic 35.0%
AATGCTTGTATTATTCCTCC+AGG + Chr3:50897781-50897800 None:intergenic 35.0%
AATGTTAGAACTGTTGCAAC+AGG + Chr3:50895089-50895108 None:intergenic 35.0%
ACTGGCGAAATATAAACACT+TGG + Chr3:50897510-50897529 None:intergenic 35.0%
AGTGGTTATAGCATAGCATA+GGG - Chr3:50894358-50894377 MsG0380014175.01.T01:intron 35.0%
AGTTCTCAAGAAAGAAGAAG+AGG - Chr3:50896461-50896480 MsG0380014175.01.T01:intron 35.0%
ATACTTGTGATTGTGTACTC+TGG - Chr3:50897226-50897245 MsG0380014175.01.T01:intron 35.0%
ATAGCTTGAAGAAACACACA+TGG + Chr3:50897306-50897325 None:intergenic 35.0%
ATATTCTACGGTCACTCTTA+AGG - Chr3:50893308-50893327 MsG0380014175.01.T01:intron 35.0%
ATGAAACACATATACTCCTC+GGG - Chr3:50892963-50892982 MsG0380014175.01.T01:intron 35.0%
CTTCATAAGTAGACTCTGAT+AGG - Chr3:50893094-50893113 MsG0380014175.01.T01:intron 35.0%
GAATATTACTTAGAGGGCAA+TGG - Chr3:50894672-50894691 MsG0380014175.01.T01:intron 35.0%
GATTCTACTTAGGGATTTAC+AGG + Chr3:50897169-50897188 None:intergenic 35.0%
GATTCTATACAAAGAGACAG+AGG + Chr3:50895275-50895294 None:intergenic 35.0%
GGATGTTTGATACCTCTAAT+AGG + Chr3:50895116-50895135 None:intergenic 35.0%
GGGGTAAAGAAATTCAATTG+TGG + Chr3:50892622-50892641 None:intergenic 35.0%
GGTGCATTATAACTAATGCT+TGG - Chr3:50895233-50895252 MsG0380014175.01.T01:intron 35.0%
GTTGATACAAAGAGGACATT+TGG + Chr3:50895298-50895317 None:intergenic 35.0%
TAACCATTTCATCTTTCTGC+AGG - Chr3:50897434-50897453 MsG0380014175.01.T01:intron 35.0%
TAGGTAGGTGTTTAGTGAAT+TGG - Chr3:50895921-50895940 MsG0380014175.01.T01:intron 35.0%
TAGTGGTTATAGCATAGCAT+AGG - Chr3:50894357-50894376 MsG0380014175.01.T01:intron 35.0%
TATATACCTGGAATGGATGT+AGG + Chr3:50893966-50893985 None:intergenic 35.0%
TATCAGTGTCGTGTCTAATT+GGG + Chr3:50892932-50892951 None:intergenic 35.0%
TATGAAAACCTGTTATGTCG+TGG - Chr3:50893480-50893499 MsG0380014175.01.T01:intron 35.0%
TCAAGAAAGAAGAAGAGGAA+AGG - Chr3:50896466-50896485 MsG0380014175.01.T01:intron 35.0%
TCCAATGTAATCACATGTGT+CGG + Chr3:50893007-50893026 None:intergenic 35.0%
TCGCAGATTTCAGAAAATAG+CGG + Chr3:50894562-50894581 None:intergenic 35.0%
TCGTTTGATGCATGTTCTTA+TGG - Chr3:50896945-50896964 MsG0380014175.01.T01:intron 35.0%
TGAACTGAGGAAAGTTATGA+AGG + Chr3:50895208-50895227 None:intergenic 35.0%
TTATTCGTTTCAGGAACAGA+TGG - Chr3:50896206-50896225 MsG0380014175.01.T01:intron 35.0%
TTCTATACAAAGAGACAGAG+GGG + Chr3:50895273-50895292 None:intergenic 35.0%
TTGATCACTAAGATTGGACT+AGG + Chr3:50893546-50893565 None:intergenic 35.0%
! AAGGAAGTTGATTGCAATCA+TGG - Chr3:50894882-50894901 MsG0380014175.01.T01:intron 35.0%
! ACTTGTGATTTGTAAGTTGC+AGG - Chr3:50893623-50893642 MsG0380014175.01.T01:CDS 35.0%
! AGGACCTTTATTTAAACCTG+GGG - Chr3:50893517-50893536 MsG0380014175.01.T01:intron 35.0%
! ATAACTGCATAAAGGTGTGT+TGG - Chr3:50893144-50893163 MsG0380014175.01.T01:intron 35.0%
! CAGGACCTTTATTTAAACCT+GGG - Chr3:50893516-50893535 MsG0380014175.01.T01:intron 35.0%
! CATCTTTTAAACCTGGAACA+TGG - Chr3:50897943-50897962 MsG0380014175.01.T01:five_prime_UTR 35.0%
! CTAGATTTTCCTTTTCTCAG+GGG - Chr3:50895156-50895175 MsG0380014175.01.T01:intron 35.0%
! GAATGGATATGTTGGTTGAA+TGG - Chr3:50894101-50894120 MsG0380014175.01.T01:intron 35.0%
! GACTAGATTTTCCTTTTCTC+AGG - Chr3:50895154-50895173 MsG0380014175.01.T01:intron 35.0%
! GAGGAGTATATGTGTTTCAT+AGG + Chr3:50892963-50892982 None:intergenic 35.0%
! GGTTTGATGATACAATTAGG+TGG - Chr3:50895818-50895837 MsG0380014175.01.T01:intron 35.0%
! TAGCCAGTGTTGTTAAATAG+TGG - Chr3:50894243-50894262 MsG0380014175.01.T01:CDS 35.0%
! TCAGGACCTTTATTTAAACC+TGG - Chr3:50893515-50893534 MsG0380014175.01.T01:intron 35.0%
! TCCGGTTTGATGATACAATT+AGG - Chr3:50895815-50895834 MsG0380014175.01.T01:intron 35.0%
! TGGTTGCTCGATTTTGTAAT+GGG - Chr3:50896097-50896116 MsG0380014175.01.T01:intron 35.0%
! TTGGTTGCTCGATTTTGTAA+TGG - Chr3:50896096-50896115 MsG0380014175.01.T01:intron 35.0%
!! AAGTTTTATGCAGCAGTTTC+CGG - Chr3:50896646-50896665 MsG0380014175.01.T01:intron 35.0%
!! ATTATTTTGTCTCAACGCTC+TGG - Chr3:50894817-50894836 MsG0380014175.01.T01:intron 35.0%
!! TTTCAATTTACCTCTGGAGT+TGG + Chr3:50894143-50894162 None:intergenic 35.0%
!!! GATTTTTGGTGTATGCCAAA+AGG - Chr3:50892848-50892867 MsG0380014175.01.T01:intron 35.0%
AAATCTGCGATTGCTAACAC+TGG - Chr3:50894572-50894591 MsG0380014175.01.T01:intron 40.0%
AAGAGATGGGTGGTGTTTAA+GGG - Chr3:50893930-50893949 MsG0380014175.01.T01:intron 40.0%
AAGGAAACAAGGAATGCAGT+AGG - Chr3:50894722-50894741 MsG0380014175.01.T01:intron 40.0%
AATATGAGCCACGACATAAC+AGG + Chr3:50893491-50893510 None:intergenic 40.0%
ACCAAGGATGAAGTGATACA+TGG + Chr3:50895765-50895784 None:intergenic 40.0%
ACCGACACATGTGATTACAT+TGG - Chr3:50893003-50893022 MsG0380014175.01.T01:intron 40.0%
ACTCCTGCAGAAAGATGAAA+TGG + Chr3:50897440-50897459 None:intergenic 40.0%
AGATAGGGACAACTTTGTAG+CGG - Chr3:50894435-50894454 MsG0380014175.01.T01:intron 40.0%
ATGAGAACCATCTCATGCAA+CGG + Chr3:50896364-50896383 None:intergenic 40.0%
CATCACGATTGCTGATATCT+CGG - Chr3:50893416-50893435 MsG0380014175.01.T01:intron 40.0%
CCTAGTGAAAGAGAAGAGAT+GGG - Chr3:50893917-50893936 MsG0380014175.01.T01:intron 40.0%
GACACCCCAGGTTTAAATAA+AGG + Chr3:50893524-50893543 None:intergenic 40.0%
GATATCACTGAAATGCGCAT+GGG - Chr3:50895846-50895865 MsG0380014175.01.T01:intron 40.0%
GATTGCAATCAACTTCCTTC+TGG + Chr3:50894881-50894900 None:intergenic 40.0%
GGCACTTACTTTGTAGTTTG+TGG - Chr3:50897012-50897031 MsG0380014175.01.T01:intron 40.0%
GTATCAGTGTCGTGTCTAAT+TGG + Chr3:50892933-50892952 None:intergenic 40.0%
GTCAAATGCATCCAAAACTG+TGG - Chr3:50893438-50893457 MsG0380014175.01.T01:intron 40.0%
GTTGTTCACCAATCGAACTA+TGG - Chr3:50892691-50892710 MsG0380014175.01.T01:intron 40.0%
GTTTCAGGAACAGATGGAAT+TGG - Chr3:50896212-50896231 MsG0380014175.01.T01:intron 40.0%
TATACGCTCGTTCATAAACC+TGG - Chr3:50897760-50897779 MsG0380014175.01.T01:CDS 40.0%
TATCACTTCATCCTTGGTGA+TGG - Chr3:50895767-50895786 MsG0380014175.01.T01:intron 40.0%
TCCATGTATCACTTCATCCT+TGG - Chr3:50895761-50895780 MsG0380014175.01.T01:intron 40.0%
TCCTAGTGAAAGAGAAGAGA+TGG - Chr3:50893916-50893935 MsG0380014175.01.T01:intron 40.0%
TCTTGCAGACTAAGGAAACA+AGG - Chr3:50894711-50894730 MsG0380014175.01.T01:intron 40.0%
TGATATCACTGAAATGCGCA+TGG - Chr3:50895845-50895864 MsG0380014175.01.T01:intron 40.0%
TTATGTCGTGGCTCATATTG+AGG - Chr3:50893492-50893511 MsG0380014175.01.T01:intron 40.0%
! AGGCATGGAGGTGATTTTAA+GGG - Chr3:50895880-50895899 MsG0380014175.01.T01:intron 40.0%
! ATTTTATTCACCTCACTCCG+AGG - Chr3:50893583-50893602 MsG0380014175.01.T01:CDS 40.0%
! GGAGTTTGTTCAGAAAACAG+TGG - Chr3:50894456-50894475 MsG0380014175.01.T01:intron 40.0%
! GGTTGCTCGATTTTGTAATG+GGG - Chr3:50896098-50896117 MsG0380014175.01.T01:intron 40.0%
! TACTTTGAAAAAGGGGTTGG+TGG - Chr3:50893346-50893365 MsG0380014175.01.T01:intron 40.0%
! TCAGGTGCATCTTTTAAACC+TGG - Chr3:50897936-50897955 MsG0380014175.01.T01:five_prime_UTR 40.0%
! TGCAATGCAAAACACCCTTT+TGG + Chr3:50892866-50892885 None:intergenic 40.0%
!! AGGTGATTTTAAGGGTAGCA+TGG - Chr3:50895888-50895907 MsG0380014175.01.T01:intron 40.0%
!! ATAAAAATGCGGAGGGTACT+TGG - Chr3:50892656-50892675 MsG0380014175.01.T01:intron 40.0%
!! ATGGTGGTGCAACTTTTATG+AGG + Chr3:50895372-50895391 None:intergenic 40.0%
!! GATTTTAAGGGTAGCATGGT+TGG - Chr3:50895892-50895911 MsG0380014175.01.T01:intron 40.0%
!! TAAAAATGCGGAGGGTACTT+GGG - Chr3:50892657-50892676 MsG0380014175.01.T01:intron 40.0%
!! TGTTGCAACAGGATTTGCTA+GGG + Chr3:50895078-50895097 None:intergenic 40.0%
!! TTAGAGGTATCAAACATCCG+TGG - Chr3:50895117-50895136 MsG0380014175.01.T01:intron 40.0%
!! TTGGTGTCTTTTGTTCTCTG+TGG - Chr3:50897355-50897374 MsG0380014175.01.T01:intron 40.0%
AAATGCTCAGCTTGTGAGAC+TGG - Chr3:50893248-50893267 MsG0380014175.01.T01:intron 45.0%
AACGAGGTTGAAGAATCACC+TGG - Chr3:50896866-50896885 MsG0380014175.01.T01:intron 45.0%
ACACATATACTCCTCGGGTT+TGG - Chr3:50892968-50892987 MsG0380014175.01.T01:intron 45.0%
ACCACTAGCGTTTCCTACAA+TGG + Chr3:50896615-50896634 None:intergenic 45.0%
ACTTCCTTCTGGTCGAATTC+CGG + Chr3:50894870-50894889 None:intergenic 45.0%
AGTGAAAGAGAAGAGATGGG+TGG - Chr3:50893920-50893939 MsG0380014175.01.T01:intron 45.0%
ATGAAGCACAGATACGGACA+CGG + Chr3:50895674-50895693 None:intergenic 45.0%
ATGAGGTCACAGTCAATCCA+TGG + Chr3:50895355-50895374 None:intergenic 45.0%
ATGGCTGGTGTGGATAAAAC+TGG - Chr3:50892710-50892729 MsG0380014175.01.T01:intron 45.0%
CACTAGTCACTACTGAGTAG+CGG - Chr3:50894524-50894543 MsG0380014175.01.T01:intron 45.0%
CATGATCCTACATCCATTCC+AGG - Chr3:50893957-50893976 MsG0380014175.01.T01:intron 45.0%
CATGGTTGGAGACATTAGGT+AGG - Chr3:50895906-50895925 MsG0380014175.01.T01:intron 45.0%
CCAAAACTGTGGTTGCATTG+TGG - Chr3:50893449-50893468 MsG0380014175.01.T01:intron 45.0%
CCAAAGAAGGAAGTAGAGTC+AGG - Chr3:50896493-50896512 MsG0380014175.01.T01:intron 45.0%
CCCATCTCTTCTCTTTCACT+AGG + Chr3:50893920-50893939 None:intergenic 45.0%
CCTGACTCTACTTCCTTCTT+TGG + Chr3:50896496-50896515 None:intergenic 45.0%
GAAGAGATGGGTGGTGTTTA+AGG - Chr3:50893929-50893948 MsG0380014175.01.T01:intron 45.0%
GAGGAAAGGAAAGCCAAAGA+AGG - Chr3:50896480-50896499 MsG0380014175.01.T01:intron 45.0%
GGGTACTTGGGAAGATTACT+GGG - Chr3:50892669-50892688 MsG0380014175.01.T01:intron 45.0%
GGTCGAATTCCGGATTACTA+GGG + Chr3:50894860-50894879 None:intergenic 45.0%
GTAGCATGGTTGGAGACATT+AGG - Chr3:50895902-50895921 MsG0380014175.01.T01:intron 45.0%
GTCCGTATCTGTGCTTCATA+GGG - Chr3:50895675-50895694 MsG0380014175.01.T01:intron 45.0%
GTGGTGAAACTCTTGTGGTA+AGG - Chr3:50893365-50893384 MsG0380014175.01.T01:intron 45.0%
GTTGAATGGGCAGCGTAAAA+GGG - Chr3:50894115-50894134 MsG0380014175.01.T01:intron 45.0%
TAATCCGGAATTCGACCAGA+AGG - Chr3:50894863-50894882 MsG0380014175.01.T01:intron 45.0%
TATCAAACATCCGTGGCACT+AGG - Chr3:50895124-50895143 MsG0380014175.01.T01:intron 45.0%
TCCATTGTAGGAAACGCTAG+TGG - Chr3:50896611-50896630 MsG0380014175.01.T01:intron 45.0%
TCCCCTATGAAGCACAGATA+CGG + Chr3:50895680-50895699 None:intergenic 45.0%
TCCGTATCTGTGCTTCATAG+GGG - Chr3:50895676-50895695 MsG0380014175.01.T01:intron 45.0%
TGAAGAATCACCTGGCACAA+GGG - Chr3:50896874-50896893 MsG0380014175.01.T01:intron 45.0%
TGACTACCTTCGGAAGAAAC+CGG + Chr3:50896668-50896687 None:intergenic 45.0%
TGAGGTCACAGTCAATCCAT+GGG + Chr3:50895354-50895373 None:intergenic 45.0%
TGGCTGGTGTGGATAAAACT+GGG - Chr3:50892711-50892730 MsG0380014175.01.T01:intron 45.0%
TGGTCGAATTCCGGATTACT+AGG + Chr3:50894861-50894880 None:intergenic 45.0%
TGTCCGTATCTGTGCTTCAT+AGG - Chr3:50895674-50895693 MsG0380014175.01.T01:intron 45.0%
TTCACCAATCGAACTATGGC+TGG - Chr3:50892695-50892714 MsG0380014175.01.T01:intron 45.0%
TTGAAGAATCACCTGGCACA+AGG - Chr3:50896873-50896892 MsG0380014175.01.T01:intron 45.0%
TTTGTGCGCGTGTCTGTATT+CGG + Chr3:50896982-50897001 None:intergenic 45.0%
! AGGGTACTTGGGAAGATTAC+TGG - Chr3:50892668-50892687 MsG0380014175.01.T01:intron 45.0%
! CAAGTTGAAGAATTCGCCCA+TGG - Chr3:50895335-50895354 MsG0380014175.01.T01:intron 45.0%
! CAGGCATGGAGGTGATTTTA+AGG - Chr3:50895879-50895898 MsG0380014175.01.T01:intron 45.0%
! CCACAATGCAACCACAGTTT+TGG + Chr3:50893452-50893471 None:intergenic 45.0%
! CTGTGGTTGCATTGTGGTTT+TGG - Chr3:50893455-50893474 MsG0380014175.01.T01:intron 45.0%
! CTGTTGCAACAGGATTTGCT+AGG + Chr3:50895079-50895098 None:intergenic 45.0%
!! ATTCAATAGGGTTGGCCAAG+TGG + Chr3:50893658-50893677 None:intergenic 45.0%
!! TATATGTGTCGGTGTCGTGT+CGG + Chr3:50895595-50895614 None:intergenic 45.0%
!! TCATCCTTGGTGATGGTCAT+CGG - Chr3:50895774-50895793 MsG0380014175.01.T01:intron 45.0%
!! TGCAATGCTTTGGGGATGTT+TGG - Chr3:50895457-50895476 MsG0380014175.01.T01:intron 45.0%
!! TAAATAAATAAATAAAAATG+CGG - Chr3:50892645-50892664 MsG0380014175.01.T01:intron 5.0%
!!! ATCATAAATAAAATTATTTT+TGG - Chr3:50896385-50896404 MsG0380014175.01.T01:CDS 5.0%
!!! TTTTATTTATTTATTTATTG+GGG + Chr3:50892642-50892661 None:intergenic 5.0%
AAAGATGCACCTGACCCTGT+TGG + Chr3:50897930-50897949 None:intergenic 50.0%
AATAAGCCGTGTCCCAGTGT+CGG - Chr3:50895550-50895569 MsG0380014175.01.T01:intron 50.0%
ACGCGCACAAAAGCTCTTGT+TGG - Chr3:50896991-50897010 MsG0380014175.01.T01:intron 50.0%
ACGCTCGTTCATAAACCTGG+AGG - Chr3:50897763-50897782 MsG0380014175.01.T01:CDS 50.0%
AGCCCCTTCTTGCTTAACGA+AGG - Chr3:50895408-50895427 MsG0380014175.01.T01:intron 50.0%
CAATCGAACTATGGCTGGTG+TGG - Chr3:50892700-50892719 MsG0380014175.01.T01:intron 50.0%
CACAAGGGATGACTTGAGGT+TGG - Chr3:50896889-50896908 MsG0380014175.01.T01:intron 50.0%
CACACCAGCCATAGTTCGAT+TGG + Chr3:50892702-50892721 None:intergenic 50.0%
CAGTTTCCGGTTTCTTCCGA+AGG - Chr3:50896659-50896678 MsG0380014175.01.T01:intron 50.0%
CCCCCTTCGTTAAGCAAGAA+GGG + Chr3:50895414-50895433 None:intergenic 50.0%
CCCCTTCGTTAAGCAAGAAG+GGG + Chr3:50895413-50895432 None:intergenic 50.0%
CCCCTTCTTGCTTAACGAAG+GGG - Chr3:50895410-50895429 MsG0380014175.01.T01:intron 50.0%
CCCTTCTTGCTTAACGAAGG+GGG - Chr3:50895411-50895430 MsG0380014175.01.T01:intron 50.0%
GCCCCTTCTTGCTTAACGAA+GGG - Chr3:50895409-50895428 MsG0380014175.01.T01:intron 50.0%
GCTTAACGAAGGGGGACAAT+GGG - Chr3:50895419-50895438 MsG0380014175.01.T01:intron 50.0%
GCTTCATAGGGGAGACTTGA+AGG - Chr3:50895687-50895706 MsG0380014175.01.T01:intron 50.0%
GCTTGAGATCCCCTGAGAAA+AGG + Chr3:50895168-50895187 None:intergenic 50.0%
GGAAAGGGACCCTAGTAATC+CGG - Chr3:50894848-50894867 MsG0380014175.01.T01:intron 50.0%
GGTTGAATGGGCAGCGTAAA+AGG - Chr3:50894114-50894133 MsG0380014175.01.T01:intron 50.0%
GTCAGACTTACCTAGTGCCA+CGG + Chr3:50895137-50895156 None:intergenic 50.0%
GTGGTACAGTGACAGCATCA+TGG + Chr3:50892603-50892622 None:intergenic 50.0%
TAAAAGGGCTCCAACTCCAG+AGG - Chr3:50894130-50894149 MsG0380014175.01.T01:intron 50.0%
TACTAGGGTCCCTTTCCCAT+AGG + Chr3:50894845-50894864 None:intergenic 50.0%
TCAAACCCCCACTATCTCCT+CGG + Chr3:50893603-50893622 None:intergenic 50.0%
TCAACCGATGACCATCACCA+AGG + Chr3:50895781-50895800 None:intergenic 50.0%
TCACTGAAATGCGCATGGGT+TGG - Chr3:50895850-50895869 MsG0380014175.01.T01:intron 50.0%
TCAGGACTTCAGAGCCAACA+GGG - Chr3:50897913-50897932 MsG0380014175.01.T01:five_prime_UTR 50.0%
TCCCCCTTCGTTAAGCAAGA+AGG + Chr3:50895415-50895434 None:intergenic 50.0%
TCGTGGCTCATATTGAGGTC+AGG - Chr3:50893497-50893516 MsG0380014175.01.T01:intron 50.0%
TGAGACTGGTGGGAAAGACA+AGG - Chr3:50893262-50893281 MsG0380014175.01.T01:intron 50.0%
TGCTTAACGAAGGGGGACAA+TGG - Chr3:50895418-50895437 MsG0380014175.01.T01:intron 50.0%
TTCAGGACTTCAGAGCCAAC+AGG - Chr3:50897912-50897931 MsG0380014175.01.T01:five_prime_UTR 50.0%
TTTGTCGCCGTTGCATGAGA+TGG - Chr3:50896354-50896373 MsG0380014175.01.T01:intron 50.0%
! CTCAACGCTCTGGTTCCTAT+GGG - Chr3:50894827-50894846 MsG0380014175.01.T01:intron 50.0%
! GCTCTGGTTCCTATGGGAAA+GGG - Chr3:50894833-50894852 MsG0380014175.01.T01:intron 50.0%
! TCTCAACGCTCTGGTTCCTA+TGG - Chr3:50894826-50894845 MsG0380014175.01.T01:intron 50.0%
! TGCAGGTGTTATGCTCCACT+TGG - Chr3:50893640-50893659 MsG0380014175.01.T01:intron 50.0%
!! GGTTGGTGGTGAAACTCTTG+TGG - Chr3:50893360-50893379 MsG0380014175.01.T01:intron 50.0%
!! TGCAACAGGATTTGCTAGGG+TGG + Chr3:50895075-50895094 None:intergenic 50.0%
ACCTCACTCCGAGGAGATAG+TGG - Chr3:50893592-50893611 MsG0380014175.01.T01:CDS 55.0%
ACTTCAGAGCCAACAGGGTC+AGG - Chr3:50897918-50897937 MsG0380014175.01.T01:five_prime_UTR 55.0%
CCTCACTCCGAGGAGATAGT+GGG - Chr3:50893593-50893612 MsG0380014175.01.T01:CDS 55.0%
CGCGTGTCTGTATTCGGAGT+GGG + Chr3:50896976-50896995 None:intergenic 55.0%
CTCAAGTCATCCCTTGTGCC+AGG + Chr3:50896887-50896906 None:intergenic 55.0%
CTCACTCCGAGGAGATAGTG+GGG - Chr3:50893594-50893613 MsG0380014175.01.T01:CDS 55.0%
CTGGCACAAGGGATGACTTG+AGG - Chr3:50896885-50896904 MsG0380014175.01.T01:intron 55.0%
GCTCAGCTTGTGAGACTGGT+GGG - Chr3:50893252-50893271 MsG0380014175.01.T01:intron 55.0%
GTTGGACTTTGCAGGCATGG+AGG - Chr3:50895868-50895887 MsG0380014175.01.T01:intron 55.0%
GTTGGAGGTTGCCATGTTCC+AGG + Chr3:50897957-50897976 None:intergenic 55.0%
TGCTCAGCTTGTGAGACTGG+TGG - Chr3:50893251-50893270 MsG0380014175.01.T01:intron 55.0%
! AGATTGGACTAGGACACCCC+AGG + Chr3:50893536-50893555 None:intergenic 55.0%
! CGCTCTGGTTCCTATGGGAA+AGG - Chr3:50894832-50894851 MsG0380014175.01.T01:intron 55.0%
! TCACTCCGAGGAGATAGTGG+GGG - Chr3:50893595-50893614 MsG0380014175.01.T01:CDS 55.0%
! TGGGTTGGACTTTGCAGGCA+TGG - Chr3:50895865-50895884 MsG0380014175.01.T01:intron 55.0%
ACACGACACGTGTCCGACAC+TGG + Chr3:50895566-50895585 None:intergenic 60.0%
ACGTGTCCGACACTGGGACA+CGG + Chr3:50895559-50895578 None:intergenic 60.0%
CACGACACGTGTCCGACACT+GGG + Chr3:50895565-50895584 None:intergenic 60.0%
CCCACTATCTCCTCGGAGTG+AGG + Chr3:50893596-50893615 None:intergenic 60.0%
GCGCGTGTCTGTATTCGGAG+TGG + Chr3:50896977-50896996 None:intergenic 60.0%
TCAGACACACGCCAAACCCG+AGG + Chr3:50892982-50893001 None:intergenic 60.0%
!! GCGCATGGGTTGGACTTTGC+AGG - Chr3:50895860-50895879 MsG0380014175.01.T01:intron 60.0%
!! TGTCGGTGTCGTGTCGGTGT+CGG + Chr3:50895589-50895608 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 50892527 50897980 50892527 ID=MsG0380014175.01;Name=MsG0380014175.01
Chr3 mRNA 50892527 50897980 50892527 ID=MsG0380014175.01.T01;Parent=MsG0380014175.01;Name=MsG0380014175.01.T01;_AED=0.44;_eAED=0.51;_QI=135|0.62|0.55|1|0.75|0.66|9|0|219
Chr3 exon 50897734 50897980 50897734 ID=MsG0380014175.01.T01:exon:9695;Parent=MsG0380014175.01.T01
Chr3 exon 50896529 50896585 50896529 ID=MsG0380014175.01.T01:exon:9696;Parent=MsG0380014175.01.T01
Chr3 exon 50896356 50896408 50896356 ID=MsG0380014175.01.T01:exon:9697;Parent=MsG0380014175.01.T01
Chr3 exon 50894237 50894288 50894237 ID=MsG0380014175.01.T01:exon:9698;Parent=MsG0380014175.01.T01
Chr3 exon 50893976 50894089 50893976 ID=MsG0380014175.01.T01:exon:9699;Parent=MsG0380014175.01.T01
Chr3 exon 50893827 50893886 50893827 ID=MsG0380014175.01.T01:exon:9700;Parent=MsG0380014175.01.T01
Chr3 exon 50893581 50893643 50893581 ID=MsG0380014175.01.T01:exon:9701;Parent=MsG0380014175.01.T01
Chr3 exon 50893007 50893091 50893007 ID=MsG0380014175.01.T01:exon:9702;Parent=MsG0380014175.01.T01
Chr3 exon 50892527 50892590 50892527 ID=MsG0380014175.01.T01:exon:9703;Parent=MsG0380014175.01.T01
Chr3 five_prime_UTR 50897846 50897980 50897846 ID=MsG0380014175.01.T01:five_prime_utr;Parent=MsG0380014175.01.T01
Chr3 CDS 50897734 50897845 50897734 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50896529 50896585 50896529 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50896356 50896408 50896356 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50894237 50894288 50894237 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50893976 50894089 50893976 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50893827 50893886 50893827 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50893581 50893643 50893581 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50893007 50893091 50893007 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Chr3 CDS 50892527 50892590 50892527 ID=MsG0380014175.01.T01:cds;Parent=MsG0380014175.01.T01
Gene Sequence

>MsG0380014175.01.T01

ATGCGGAGGGTACTTGGGAAGATTACTGGGTTGTTCACCAATCGAACTATGGCTGGTGTGGATAAAACTGGGAATAAATATTTCACCAGAAATGAACAAATTGATGGTATCATGAAAGAGAAGAGATGGGTGGTGTTTAAGGGAGAGCATGATCCTACATCCATTCCAGTTGAATGGATATGTTGGTTGAATGGGCAGCGTAAAAGGGCTCCAACTCCAGAGGAACAGATGGAATTGGACGCAAGACGTGAGCAAGTCAAGCAAAATGTTGCTCTTCTATACAGAGATCTTAACACAAACTGTTTTTTCTTTCACAAAGTTCTCAAGAAAGAAGAAGAGGAAAGGAAAGCCAAAGAAGGAAGTAGAGTCAGGCGTGTCGTCAACACTGGAAACGCTAGTGGTCCAGACTTGAAAAGTTTTATGCAGCAGTTTCCGGTTTCTTCCGAAGGTAACGAGGTTGAAGAATCACCTGGCACAAGGGATGACTTGAGGTTGGTCTTTGAAATTGATAGAGTAACAACAATTCAAGTAACCATTTCATCTTTCTGCAGGAGTTCTCAAGACAGCAAAGATAAGAATGCAGAAGATGAGCTTGAGACTTCAGAGCCAACAGGGTCAGGTGCATCTTTTAAACCTGGAACATGGCAACCTCCAACTTGA

Protein sequence

>MsG0380014175.01.T01

MRRVLGKITGLFTNRTMAGVDKTGNKYFTRNEQIDGIMKEKRWVVFKGEHDPTSIPVEWICWLNGQRKRAPTPEEQMELDARREQVKQNVALLYRDLNTNCFFFHKVLKKEEEERKAKEGSRVRRVVNTGNASGPDLKSFMQQFPVSSEGNEVEESPGTRDDLRLVFEIDRVTTIQVTISSFCRSSQDSKDKNAEDELETSEPTGSGASFKPGTWQPPT*