AlfalfaGEDB | MsG0380016744.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016744.01

KEGG: K02934
GO: GO:0003735 GO:0005622 GO:0005840 GO:0006412
PFAM: PF01159 PF03868

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016744.01.T01	XP_003602457.1	87.124	233	15	3	1	218	1	233	6.08E-136	390

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016744.01.T01	P34091	70.69	232	53	3	2	218	3	234	2.77E-102	298

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016744.01.T01	G7J9R6	87.124	233	15	3	1	218	1	233	2.90e-136	390

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048922.01	MsG0380016744.01	0.836325	9.999406e-57	1.256030e-53
MsG0180000096.01	MsG0380016744.01	0.859796	3.227753e-63	8.630475e-60
MsG0180000118.01	MsG0380016744.01	0.902463	9.453187e-79	1.339923e-74
MsG0180001169.01	MsG0380016744.01	0.905451	4.232573e-80	6.850183e-76
MsG0180001829.01	MsG0380016744.01	0.889471	2.350977e-73	1.899275e-69
MsG0180001837.01	MsG0380016744.01	0.820270	7.493456e-53	5.901698e-50
MsG0180002738.01	MsG0380016744.01	0.879546	1.141329e-69	6.211579e-66
MsG0180003585.01	MsG0380016744.01	0.902942	5.780357e-79	8.378775e-75
MsG0180003623.01	MsG0380016744.01	0.842837	2.025537e-58	3.109567e-55
MsG0180003897.01	MsG0380016744.01	0.928865	1.576587e-92	8.530780e-88
MsG0180004064.01	MsG0380016744.01	0.829996	3.765267e-55	3.916713e-52
MsG0180004503.01	MsG0380016744.01	0.916696	1.305693e-85	3.631939e-81
MsG0180004829.01	MsG0380016744.01	0.835004	2.159932e-56	2.607076e-53
MsG0180005384.01	MsG0380016744.01	0.849655	2.813189e-60	5.370650e-57
MsG0180005573.01	MsG0380016744.01	0.812166	4.861047e-51	3.068135e-48
MsG0180005789.01	MsG0380016744.01	0.849683	2.763523e-60	5.280965e-57
MsG0280006301.01	MsG0380016744.01	0.893946	3.911633e-75	3.808866e-71
MsG0380014507.01	MsG0380016744.01	0.839851	1.237148e-57	1.730354e-54
MsG0380015446.01	MsG0380016744.01	0.904737	8.973724e-80	1.406832e-75
MsG0380015766.01	MsG0380016744.01	0.837755	4.309144e-57	5.653250e-54
MsG0380015857.01	MsG0380016744.01	0.935617	6.400913e-97	5.209525e-92
MsG0380016183.01	MsG0380016744.01	0.806210	9.188677e-50	4.958659e-47
MsG0380016201.01	MsG0380016744.01	0.806267	8.939546e-50	4.831180e-47
MsG0380016653.01	MsG0380016744.01	0.846861	1.664170e-59	2.903655e-56
MsG0380016678.01	MsG0380016744.01	0.853649	2.078882e-61	4.523253e-58
MsG0380016732.01	MsG0380016744.01	0.862865	3.742820e-64	1.112624e-60
MsG0380016744.01	MsG0380016760.01	0.879305	1.388894e-69	7.493063e-66
MsG0380016744.01	MsG0380016805.01	0.905347	4.726522e-80	7.612814e-76
MsG0380016744.01	MsG0380017119.01	0.834698	2.579270e-56	3.084224e-53
MsG0380016744.01	MsG0380017385.01	-0.800761	1.238144e-48	5.812441e-46
MsG0380016744.01	MsG0380017516.01	0.829030	6.465452e-55	6.537755e-52
MsG0380016744.01	MsG0480018164.01	0.866320	3.107996e-65	1.043192e-61
MsG0380016744.01	MsG0480019165.01	0.847273	1.283379e-59	2.269043e-56
MsG0380016744.01	MsG0480019604.01	-0.809175	2.154957e-50	1.256396e-47
MsG0380016744.01	MsG0480020796.01	0.890590	8.588634e-74	7.268143e-70
MsG0380016744.01	MsG0480020911.01	0.852309	5.025375e-61	1.045816e-57
MsG0380016744.01	MsG0480021279.01	0.865930	4.131645e-65	1.367827e-61
MsG0380016744.01	MsG0480021417.01	0.907295	5.912383e-81	1.042619e-76
MsG0380016744.01	MsG0480022006.01	0.904951	7.167887e-80	1.134215e-75
MsG0380016744.01	MsG0480022363.01	0.820379	7.077004e-53	5.590841e-50
MsG0380016744.01	MsG0480022955.01	0.902675	7.602537e-79	1.088958e-74
MsG0380016744.01	MsG0480023380.01	0.890202	1.219397e-73	1.015261e-69
MsG0380016744.01	MsG0480023774.01	0.893231	7.621427e-75	7.201589e-71
MsG0380016744.01	MsG0480023931.01	0.914865	1.160204e-84	2.947673e-80
MsG0380016744.01	MsG0480023996.01	0.909296	6.659520e-82	1.286866e-77
MsG0380016744.01	MsG0580024481.01	0.821264	4.428201e-53	3.584972e-50
MsG0380016744.01	MsG0580024540.01	0.839434	1.587997e-57	2.192849e-54
MsG0380016744.01	MsG0580024738.01	0.913076	9.352357e-84	2.173226e-79
MsG0380016744.01	MsG0580024894.01	0.865892	4.246858e-65	1.404110e-61
MsG0380016744.01	MsG0580025750.01	0.833744	4.471705e-56	5.197076e-53
MsG0380016744.01	MsG0580029754.01	0.834851	2.359552e-56	2.834855e-53
MsG0380016744.01	MsG0580030073.01	0.807981	3.876335e-50	2.189808e-47
MsG0380016744.01	MsG0680031368.01	0.877637	5.354424e-69	2.711746e-65
MsG0380016744.01	MsG0680032459.01	0.890359	1.057880e-73	8.866124e-70
MsG0380016744.01	MsG0680035611.01	0.855305	6.898251e-62	1.585697e-58
MsG0380016744.01	MsG0780036859.01	0.858072	1.058851e-62	2.669440e-59
MsG0380016744.01	MsG0780038383.01	0.811423	7.054438e-51	4.365057e-48
MsG0380016744.01	MsG0780039937.01	0.878037	3.883128e-69	1.996428e-65
MsG0380016744.01	MsG0780041076.01	0.841369	4.955084e-58	7.265195e-55
MsG0380016744.01	MsG0780041240.01	0.872829	2.354222e-67	9.992287e-64
MsG0380016744.01	MsG0780041311.01	0.907043	7.755230e-81	1.350673e-76
MsG0380016744.01	MsG0780041522.01	0.840389	8.955432e-58	1.273757e-54
MsG0380016744.01	MsG0780041790.01	0.840853	6.772107e-58	9.771526e-55
MsG0380016744.01	MsG0880041941.01	0.849238	3.676196e-60	6.925408e-57
MsG0380016744.01	MsG0880042517.01	0.881204	2.914216e-70	1.691871e-66
MsG0380016744.01	MsG0880042896.01	0.821869	3.210321e-53	2.643796e-50
MsG0380016744.01	MsG0880043076.01	0.900913	4.547070e-78	5.997484e-74
MsG0380016744.01	MsG0880044204.01	0.887227	1.716751e-72	1.265952e-68
MsG0380016744.01	MsG0880045836.01	0.831046	2.083400e-55	2.234735e-52
MsG0380016744.01	MsG0880046220.01	0.803230	3.849500e-49	1.924098e-46
MsG0380016744.01	MsG0880046243.01	0.805117	1.558643e-49	8.178285e-47
MsG0380016744.01	MsG0880046486.01	0.870350	1.559208e-66	6.045391e-63
MsG0380016744.01	MsG0880046760.01	0.815961	7.070210e-52	4.944785e-49
MsG0380016744.01	MsG0880047090.01	0.822231	2.645373e-53	2.201151e-50
MsG0380016744.01	MsG0880047310.01	0.819768	9.765082e-53	7.584434e-50
MsG0280006629.01	MsG0380016744.01	0.875263	3.535539e-68	1.640496e-64
MsG0280006747.01	MsG0380016744.01	0.914056	2.998136e-84	7.309886e-80
MsG0280007055.01	MsG0380016744.01	0.888006	8.655868e-73	6.588269e-69
MsG0280007084.01	MsG0380016744.01	0.867519	1.289213e-65	4.513720e-62
MsG0280007606.01	MsG0380016744.01	0.870632	1.259816e-66	4.934676e-63
MsG0280007995.01	MsG0380016744.01	0.824774	6.726010e-54	6.016221e-51
MsG0280010203.01	MsG0380016744.01	0.870767	1.137624e-66	4.477827e-63
MsG0280010232.01	MsG0380016744.01	0.890552	8.887427e-74	7.509405e-70

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016744.01.T01	MTR_3g094570	87.124	233	15	3	1	218	1	233	7.36e-140	390
MsG0380016744.01.T01	MTR_3g094860	86.266	233	17	3	1	218	1	233	5.47e-138	386
MsG0380016744.01.T01	MTR_5g098090	73.504	234	46	4	1	218	1	234	3.15e-114	326
MsG0380016744.01.T01	MTR_8g091910	68.803	234	42	5	1	218	1	219	6.00e-103	296

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016744.01.T01	AT1G74060	69.099	233	57	3	1	218	1	233	2.01e-96	281
MsG0380016744.01.T01	AT1G74050	69.099	233	57	3	1	218	1	233	3.11e-96	280
MsG0380016744.01.T01	AT1G18540	67.382	233	61	3	1	218	1	233	3.59e-89	262

Find 71 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTCTTGCCGGAAGATTTA+AGG	0.144333	3:-87323736	MsG0380016744.01.T01:CDS
CCGATACCCCTGATCAATTC+AGG	0.224276	3:+87325508	None:intergenic
TTTCTCAAGCAGCTTCCTTC+TGG	0.237735	3:-87323700	MsG0380016744.01.T01:CDS
TTTGATCATCCTTCTTCTCT+TGG	0.241206	3:+87322109	None:intergenic
TTGATCATCCTTCTTCTCTT+GGG	0.285928	3:+87322110	None:intergenic
TACTCTTGCAGTTCTTTGCT+TGG	0.312751	3:+87325540	None:intergenic
CTCTCTTCCCTTAAATCTTC+CGG	0.321866	3:+87323728	None:intergenic
TCTGGACTTCTTCTCGTTAC+CGG	0.334203	3:-87323682	MsG0380016744.01.T01:intron
TGTACCACAAGCGTGGGCTC+TGG	0.340160	3:-87325465	MsG0380016744.01.T01:CDS
ACCACCGTGCTTGGCTTTGA+TGG	0.340487	3:+87325441	None:intergenic
AACCTGAGCTTAGTGGGCTT+TGG	0.360630	3:+87325310	None:intergenic
CGAGTTCTTTGAGGCAGATA+AGG	0.375748	3:-87322249	MsG0380016744.01.T01:CDS
ACTCTTGCAGTTCTTTGCTT+GGG	0.381464	3:+87325541	None:intergenic
TGGCTTCACACCTGCCTTCA+AGG	0.382880	3:+87322011	None:intergenic
TTCAGGGCTTCCATTACTCC+TGG	0.384116	3:-87323771	MsG0380016744.01.T01:intron
AGAAGAATCAACACTGTTCC+AGG	0.392446	3:+87323753	None:intergenic
CTTCTTGCCGGAAGATTTAA+GGG	0.406035	3:-87323735	MsG0380016744.01.T01:CDS
GCCGTAACCCTGAATTGATC+AGG	0.416781	3:-87325516	MsG0380016744.01.T01:CDS
CCAAGGTAAGTCTTCAAGTC+TGG	0.429639	3:+87322045	None:intergenic
AACCGAAGAAATGTCTACTT+TGG	0.432126	3:+87322340	None:intergenic
ACAGTGTTGATTCTTCTTGC+CGG	0.435433	3:-87323747	MsG0380016744.01.T01:CDS
GGCTTCTTCACATCGTCGGC+GGG	0.438115	3:+87325352	None:intergenic
CCCTGATCAATTCAGGGTTA+CGG	0.450408	3:+87325515	None:intergenic
GTGAATCAGGCATATGTTAT+CGG	0.451583	3:-87322371	MsG0380016744.01.T01:intron
CAAGTCTGGAACACTGTCAA+TGG	0.454071	3:+87322059	None:intergenic
CGTCGCTAAGGCTGCAGCTC+CGG	0.457093	3:-87325398	MsG0380016744.01.T01:CDS
GTACCACAAGCGTGGGCTCT+GGG	0.465574	3:-87325464	MsG0380016744.01.T01:CDS
CGATACCCCTGATCAATTCA+GGG	0.465988	3:+87325509	None:intergenic
TGATCATCCTTCTTCTCTTG+GGG	0.470714	3:+87322111	None:intergenic
AACTTAGGTGGCTTCTCGAC+CGG	0.474725	3:+87325379	None:intergenic
AACCAAAGTAGACATTTCTT+CGG	0.476825	3:-87322342	MsG0380016744.01.T01:CDS
GAGCCCACGCTTGTGGTACA+TGG	0.479514	3:+87325468	None:intergenic
TGAAGACTTACCTTGGTGCC+AGG	0.485144	3:-87322038	MsG0380016744.01.T01:CDS
AGGGAAAGAACCACCGTGCT+TGG	0.486637	3:+87325432	None:intergenic
CAACACTGTTCCAGGAGTAA+TGG	0.486929	3:+87323761	None:intergenic
CCTGAATTGATCAGGGGTAT+CGG	0.492309	3:-87325508	MsG0380016744.01.T01:CDS
GGGAGAGAGCGAGTTCTTTG+AGG	0.505471	3:-87322258	MsG0380016744.01.T01:CDS
ACCTGCCTTCAAGGAAAACC+TGG	0.516282	3:+87322020	None:intergenic
GGTGACGAACCTGAGCTTAG+TGG	0.535903	3:+87325303	None:intergenic
GATCAAAAGACTGTTGATGC+TGG	0.542508	3:-87322093	MsG0380016744.01.T01:CDS
TGGCCCAGAGCCCACGCTTG+TGG	0.545998	3:+87325461	None:intergenic
GATCATCCTTCTTCTCTTGG+GGG	0.548827	3:+87322112	None:intergenic
TCGTCGGCGGGGTAAAACTT+AGG	0.552424	3:+87325364	None:intergenic
GCTTTGGCTTGTGCTTGTTG+CGG	0.553049	3:+87325326	None:intergenic
CCGTAACCCTGAATTGATCA+GGG	0.555623	3:-87325515	MsG0380016744.01.T01:CDS
AGCCAAAGCCCACTAAGCTC+AGG	0.559866	3:-87325312	MsG0380016744.01.T01:intron
CCAGACTTGAAGACTTACCT+TGG	0.561891	3:-87322045	MsG0380016744.01.T01:CDS
TCGTCACGATCCCGTCGCTA+AGG	0.562513	3:-87325410	MsG0380016744.01.T01:CDS
GGAGCTGCAGCCTTAGCGAC+GGG	0.567898	3:+87325400	None:intergenic
GGGGTATCGGAAAATACTCT+AGG	0.568283	3:-87325495	MsG0380016744.01.T01:CDS
TGGCTTCTTCACATCGTCGG+CGG	0.569896	3:+87325351	None:intergenic
GTGACGAACCTGAGCTTAGT+GGG	0.585384	3:+87325304	None:intergenic
CGGAGCTGCAGCCTTAGCGA+CGG	0.590166	3:+87325399	None:intergenic
GGCTTGTGCTTGTTGCGGAG+TGG	0.594085	3:+87325331	None:intergenic
TGATGACAAGTACTTCTCAA+AGG	0.595456	3:-87322303	MsG0380016744.01.T01:CDS
GTTCTTTGAGGCAGATAAGG+AGG	0.599942	3:-87322246	MsG0380016744.01.T01:intron
CTCTAGAAGACCAACTCGTG+TGG	0.601883	3:+87321991	None:intergenic
GAGTGGCTTCTTCACATCGT+CGG	0.602023	3:+87325348	None:intergenic
TGGGCCATCAAAGCCAAGCA+CGG	0.612265	3:-87325445	MsG0380016744.01.T01:CDS
CTGCCATGTACCACAAGCGT+GGG	0.619476	3:-87325471	MsG0380016744.01.T01:CDS
GTAACGAGAAGAAGTCCAGA+AGG	0.620622	3:+87323685	None:intergenic
CACACGAGTTGGTCTTCTAG+AGG	0.630211	3:-87321990	None:intergenic
AGGTGTGAAGCCACACGAGT+TGG	0.631048	3:-87322001	MsG0380016744.01.T01:CDS
TTAGCGACGGGATCGTGACG+AGG	0.633658	3:+87325412	None:intergenic
GCTTCTTCACATCGTCGGCG+GGG	0.637997	3:+87325353	None:intergenic
TCTGCCATGTACCACAAGCG+TGG	0.639753	3:-87325472	MsG0380016744.01.T01:CDS
TCAAGGAAAACCTGGCACCA+AGG	0.644709	3:+87322028	None:intergenic
TCGGCGGGGTAAAACTTAGG+TGG	0.654802	3:+87325367	None:intergenic
TAGCGACGGGATCGTGACGA+GGG	0.688534	3:+87325413	None:intergenic
CGTAACCCTGAATTGATCAG+GGG	0.696777	3:-87325514	MsG0380016744.01.T01:CDS
GCCATCAAAGCCAAGCACGG+TGG	0.747137	3:-87325442	MsG0380016744.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGAAAATATACAAATTTCAT+AGG	-	Chr3:87322700-87322719	MsG0380016744.01.T01:intron	15.0%
!!	ATGATAAAATTTATGATGTT+AGG	-	Chr3:87323158-87323177	MsG0380016744.01.T01:intron	15.0%
!!	GAAAATATACAAATTTCATA+GGG	-	Chr3:87322701-87322720	MsG0380016744.01.T01:intron	15.0%
!!	TATTGTTAATTATGATATGT+TGG	-	Chr3:87322409-87322428	MsG0380016744.01.T01:intron	15.0%
!!!	TAAATCTTTTTGAATAAAGT+TGG	-	Chr3:87322278-87322297	MsG0380016744.01.T01:CDS	15.0%
!!!	TTAAACTCTAATTGAAATTT+TGG	-	Chr3:87323507-87323526	MsG0380016744.01.T01:intron	15.0%
!!	AAGAAACAAGAAATAAGAAA+GGG	-	Chr3:87324843-87324862	MsG0380016744.01.T01:intron	20.0%
!!	ATCAAATCTAAAGGTTTAAA+TGG	+	Chr3:87324132-87324151	None:intergenic	20.0%
!!	TAAACCAAAAAAACAATTAC+CGG	+	Chr3:87323880-87323899	None:intergenic	20.0%
!!	TAAGAAACAAGAAATAAGAA+AGG	-	Chr3:87324842-87324861	MsG0380016744.01.T01:intron	20.0%
!!	TAATTTATTCTTTCTCAAGA+AGG	-	Chr3:87324408-87324427	MsG0380016744.01.T01:intron	20.0%
!!	TGAATGATTTATATAGTTCA+TGG	-	Chr3:87323739-87323758	MsG0380016744.01.T01:CDS	20.0%
!!	TTATCAATAGAAATGAACAA+CGG	+	Chr3:87322261-87322280	None:intergenic	20.0%
!!!	AAATTTGAGATTTGATTCAT+TGG	-	Chr3:87322648-87322667	MsG0380016744.01.T01:intron	20.0%
!!!	AATTTTGTTAGTGTCTATAT+TGG	-	Chr3:87323688-87323707	MsG0380016744.01.T01:CDS	20.0%
!!!	CACAAATACGTAAATAATTT+TGG	+	Chr3:87324006-87324025	None:intergenic	20.0%
!!!	GCTATTTGTTTATTTTGTTT+TGG	-	Chr3:87322373-87322392	MsG0380016744.01.T01:intron	20.0%
!!!	GTAATTGTTTTTTTGGTTTA+AGG	-	Chr3:87323880-87323899	MsG0380016744.01.T01:intron	20.0%
!!!	TGGAGATATACATATAATTT+TGG	-	Chr3:87324465-87324484	MsG0380016744.01.T01:intron	20.0%
!!!	TGTATTTTGAAGTTCAAATA+TGG	-	Chr3:87322505-87322524	MsG0380016744.01.T01:intron	20.0%
!!!	TTTAGACATTATTTTGAAAC+TGG	+	Chr3:87324703-87324722	None:intergenic	20.0%
!	AAAATTGCTTCTTATACATG+TGG	-	Chr3:87324385-87324404	MsG0380016744.01.T01:intron	25.0%
!	AACAACAACATTGTAAAGAT+CGG	+	Chr3:87325385-87325404	None:intergenic	25.0%
!	AATTAAGTATCAGGAAAACA+TGG	-	Chr3:87323187-87323206	MsG0380016744.01.T01:intron	25.0%
!	AGAAGAAAAAGATAGTCTAT+AGG	-	Chr3:87324163-87324182	MsG0380016744.01.T01:intron	25.0%
!	AGGAATTGAAATTAAGTATC+AGG	-	Chr3:87323178-87323197	MsG0380016744.01.T01:intron	25.0%
!	ATACAAATTTCATAGGGTTA+GGG	-	Chr3:87322707-87322726	MsG0380016744.01.T01:intron	25.0%
!	ATTAAGTATCAGGAAAACAT+GGG	-	Chr3:87323188-87323207	MsG0380016744.01.T01:intron	25.0%
!	GTACAACAAGCAAATATATA+TGG	+	Chr3:87323949-87323968	None:intergenic	25.0%
!	GTGAATATATGGAAAATATG+CGG	-	Chr3:87322800-87322819	MsG0380016744.01.T01:intron	25.0%
!	GTTAATTATGATATGTTGGA+CGG	-	Chr3:87322413-87322432	MsG0380016744.01.T01:intron	25.0%
!	TATACAAATTTCATAGGGTT+AGG	-	Chr3:87322706-87322725	MsG0380016744.01.T01:intron	25.0%
!	TGAATATATGGAAAATATGC+GGG	-	Chr3:87322801-87322820	MsG0380016744.01.T01:intron	25.0%
!	TGTACTACAATCAAATCTAA+AGG	+	Chr3:87324141-87324160	None:intergenic	25.0%
!	TTGAATGTTTACACACATTA+TGG	+	Chr3:87324354-87324373	None:intergenic	25.0%
!	TTTATTAACATGTGTTGAGT+GGG	-	Chr3:87323222-87323241	MsG0380016744.01.T01:intron	25.0%
!!	AAGTTCAAATATGGATTTTG+GGG	-	Chr3:87322514-87322533	MsG0380016744.01.T01:intron	25.0%
!!	GAAGTTCAAATATGGATTTT+GGG	-	Chr3:87322513-87322532	MsG0380016744.01.T01:intron	25.0%
!!	TGAAGTTCAAATATGGATTT+TGG	-	Chr3:87322512-87322531	MsG0380016744.01.T01:intron	25.0%
!!	TTTTATTAACATGTGTTGAG+TGG	-	Chr3:87323221-87323240	MsG0380016744.01.T01:intron	25.0%
!!!	ATAGACATTTTGAAGTTCTT+TGG	-	Chr3:87323452-87323471	MsG0380016744.01.T01:intron	25.0%
!!!	GAAATGGATTTTGTGAATAA+AGG	-	Chr3:87322435-87322454	MsG0380016744.01.T01:intron	25.0%
!!!	TGAGTTGTTTTAGAATTCTT+GGG	-	Chr3:87322581-87322600	MsG0380016744.01.T01:intron	25.0%
!!!	TTGAGTTGTTTTAGAATTCT+TGG	-	Chr3:87322580-87322599	MsG0380016744.01.T01:intron	25.0%
!!!	TTTTAAATGCTGTTTCGTTT+TGG	-	Chr3:87323122-87323141	MsG0380016744.01.T01:intron	25.0%
	AAAGGGTGAAAAAGCAAATA+TGG	-	Chr3:87324860-87324879	MsG0380016744.01.T01:intron	30.0%
	AACCAAAGTAGACATTTCTT+CGG	-	Chr3:87325198-87325217	MsG0380016744.01.T01:intron	30.0%
	AACTTCAAAATACAGTTAGC+AGG	+	Chr3:87322499-87322518	None:intergenic	30.0%
	AAGGGTGAAAAAGCAAATAT+GGG	-	Chr3:87324861-87324880	MsG0380016744.01.T01:intron	30.0%
	AATGTAGCTAAGGATGATTA+CGG	+	Chr3:87324496-87324515	None:intergenic	30.0%
	ACAATAGAGACTGTCATATT+TGG	-	Chr3:87324105-87324124	MsG0380016744.01.T01:intron	30.0%
	ACTTCAAAATACAGTTAGCA+GGG	+	Chr3:87322498-87322517	None:intergenic	30.0%
	AGTAAATGTGAATGTAGCTA+AGG	+	Chr3:87324506-87324525	None:intergenic	30.0%
	CAAATATGGGGTTAATGATA+AGG	-	Chr3:87324874-87324893	MsG0380016744.01.T01:intron	30.0%
	CAAGCTAAACAACATCAAAA+AGG	+	Chr3:87323004-87323023	None:intergenic	30.0%
	CGAATCTTTCTGTGAATATA+TGG	-	Chr3:87322789-87322808	MsG0380016744.01.T01:intron	30.0%
	GAGAATGAACAAATGAAGAT+TGG	+	Chr3:87325104-87325123	None:intergenic	30.0%
	GATTGAAACTAAATCAACCT+TGG	-	Chr3:87324025-87324044	MsG0380016744.01.T01:intron	30.0%
	TAAACCAATAGAGTGTACTA+AGG	+	Chr3:87323083-87323102	None:intergenic	30.0%
	TAATGATAAGGAAAGTAGGT+AGG	-	Chr3:87324886-87324905	MsG0380016744.01.T01:intron	30.0%
	TACGAATTGAATATTACCAC+CGG	-	Chr3:87322302-87322321	MsG0380016744.01.T01:CDS	30.0%
	TAGATACACTTTGAATTTGC+CGG	+	Chr3:87322324-87322343	None:intergenic	30.0%
	TAGGAATTGTATTCGTGTTT+GGG	-	Chr3:87322554-87322573	MsG0380016744.01.T01:intron	30.0%
	TATCAACATTATGGATATGC+CGG	-	Chr3:87323360-87323379	MsG0380016744.01.T01:intron	30.0%
	TGAATAAAGGATGGAGAAAT+GGG	-	Chr3:87322448-87322467	MsG0380016744.01.T01:intron	30.0%
	TGATATTAAACACGCACATA+GGG	-	Chr3:87322744-87322763	MsG0380016744.01.T01:intron	30.0%
	TGCATCATCAATATAACTCA+TGG	+	Chr3:87323971-87323990	None:intergenic	30.0%
	TGTTTCTTACATTACAGCTT+CGG	+	Chr3:87324831-87324850	None:intergenic	30.0%
	TTAGGAATTGTATTCGTGTT+TGG	-	Chr3:87322553-87322572	MsG0380016744.01.T01:intron	30.0%
	TTATTAACATGTGTTGAGTG+GGG	-	Chr3:87323223-87323242	MsG0380016744.01.T01:intron	30.0%
	TTCATGTTATTACCTGAGAT+TGG	-	Chr3:87323913-87323932	MsG0380016744.01.T01:intron	30.0%
!	AAGTAATGACTTGTGAGATA+TGG	-	Chr3:87324082-87324101	MsG0380016744.01.T01:intron	30.0%
!	CATGAGTCTACATTACATTT+TGG	-	Chr3:87324584-87324603	MsG0380016744.01.T01:intron	30.0%
!	CATTAAGTTTTTCACCTTTG+AGG	+	Chr3:87324978-87324997	None:intergenic	30.0%
!	GGTTTGATTTATGTGTGATT+AGG	-	Chr3:87322535-87322554	MsG0380016744.01.T01:intron	30.0%
!	TGGATTTTGTGAATAAAGGA+TGG	-	Chr3:87322439-87322458	MsG0380016744.01.T01:intron	30.0%
!!	TTAGTACACTCTATTGGTTT+AGG	-	Chr3:87323082-87323101	MsG0380016744.01.T01:intron	30.0%
!!!	AGTTCATGGTTTTGTTTTCA+GGG	-	Chr3:87323753-87323772	MsG0380016744.01.T01:CDS	30.0%
!!!	GAGCACTTTTTTATCCTAAA+AGG	+	Chr3:87325409-87325428	None:intergenic	30.0%
!!!	GTTACCGGTAATTGTTTTTT+TGG	-	Chr3:87323873-87323892	MsG0380016744.01.T01:intron	30.0%
!!!	TAGTTCATGGTTTTGTTTTC+AGG	-	Chr3:87323752-87323771	MsG0380016744.01.T01:CDS	30.0%
	AAAGTTGAACAACAACCCAA+TGG	+	Chr3:87324935-87324954	None:intergenic	35.0%
	AACCGAAGAAATGTCTACTT+TGG	+	Chr3:87325203-87325222	None:intergenic	35.0%
	AATAGTCTGTGTCTTGATTG+TGG	-	Chr3:87323052-87323071	MsG0380016744.01.T01:intron	35.0%
	AATCTCAGTCATTAGTTGGA+TGG	+	Chr3:87324743-87324762	None:intergenic	35.0%
	AGGGTGAAAAAGCAAATATG+GGG	-	Chr3:87324862-87324881	MsG0380016744.01.T01:intron	35.0%
	AGTAAGGGATCTCAATAGTT+GGG	-	Chr3:87324644-87324663	MsG0380016744.01.T01:intron	35.0%
	ATCCCAGAAAAAGACTAAGA+AGG	-	Chr3:87325261-87325280	MsG0380016744.01.T01:intron	35.0%
	ATTAATCTTGAATGGACCTG+AGG	+	Chr3:87325131-87325150	None:intergenic	35.0%
	CTCAAAGAGACAAAGAATGA+TGG	-	Chr3:87323296-87323315	MsG0380016744.01.T01:intron	35.0%
	CTTCTGCTTCTTAGTAAACA+TGG	-	Chr3:87324445-87324464	MsG0380016744.01.T01:intron	35.0%
	GAGACTAAAGAAGGTCTTTA+AGG	+	Chr3:87325068-87325087	None:intergenic	35.0%
	GGAACATAAAATACTGACCA+AGG	+	Chr3:87324045-87324064	None:intergenic	35.0%
	GGGTTAATGATAAGGAAAGT+AGG	-	Chr3:87324882-87324901	MsG0380016744.01.T01:intron	35.0%
	GTAGACTCATGATACAAGAA+GGG	+	Chr3:87324575-87324594	None:intergenic	35.0%
	GTGAATAAAGGATGGAGAAA+TGG	-	Chr3:87322447-87322466	MsG0380016744.01.T01:intron	35.0%
	GTGAATCAGGCATATGTTAT+CGG	-	Chr3:87325169-87325188	MsG0380016744.01.T01:intron	35.0%
	GTGATATTAAACACGCACAT+AGG	-	Chr3:87322743-87322762	MsG0380016744.01.T01:intron	35.0%
	GTTTCTTACATTACAGCTTC+GGG	+	Chr3:87324830-87324849	None:intergenic	35.0%
	TACAAGAAGGGTAGATGAAA+TGG	+	Chr3:87324563-87324582	None:intergenic	35.0%
	TATGATATGTTGGACGGAAA+TGG	-	Chr3:87322419-87322438	MsG0380016744.01.T01:intron	35.0%
	TATTAACATGTGTTGAGTGG+GGG	-	Chr3:87323224-87323243	MsG0380016744.01.T01:intron	35.0%
	TCAACTTTGACAAGCAAAAC+AGG	-	Chr3:87324947-87324966	MsG0380016744.01.T01:intron	35.0%
	TCAAGACACAGACTATTAGT+TGG	+	Chr3:87323049-87323068	None:intergenic	35.0%
	TCAGGTCCATTCAAGATTAA+TGG	-	Chr3:87325130-87325149	MsG0380016744.01.T01:intron	35.0%
	TCCCAGAAAAAGACTAAGAA+GGG	-	Chr3:87325262-87325281	MsG0380016744.01.T01:intron	35.0%
	TGATGACAAGTACTTCTCAA+AGG	-	Chr3:87325237-87325256	MsG0380016744.01.T01:intron	35.0%
	TGTAGACTCATGATACAAGA+AGG	+	Chr3:87324576-87324595	None:intergenic	35.0%
	TGTGAATCTCAGTCATTAGT+TGG	+	Chr3:87324747-87324766	None:intergenic	35.0%
	TGTGTTTGGTTGAAAAGTGA+AGG	-	Chr3:87324228-87324247	MsG0380016744.01.T01:intron	35.0%
	TTAAGCCACAATGAGTTGTT+CGG	+	Chr3:87324676-87324695	None:intergenic	35.0%
	TTGATCATCCTTCTTCTCTT+GGG	+	Chr3:87325433-87325452	None:intergenic	35.0%
	TTGTAAAGATCGGCATACAA+AGG	+	Chr3:87325375-87325394	None:intergenic	35.0%
	TTTCTTACATTACAGCTTCG+GGG	+	Chr3:87324829-87324848	None:intergenic	35.0%
	TTTGATCATCCTTCTTCTCT+TGG	+	Chr3:87325434-87325453	None:intergenic	35.0%
!	AAAGTATGGAAGTATGGTGT+AGG	-	Chr3:87322471-87322490	MsG0380016744.01.T01:intron	35.0%
!	AATGGGAAAGTATGGAAGTA+TGG	-	Chr3:87322465-87322484	MsG0380016744.01.T01:intron	35.0%
!	ATCAAACTTATCGTTCTGAG+CGG	-	Chr3:87324789-87324808	MsG0380016744.01.T01:intron	35.0%
!	GGTCAGTATTTTATGTTCCA+GGG	-	Chr3:87324046-87324065	MsG0380016744.01.T01:intron	35.0%
!	TGGTCAGTATTTTATGTTCC+AGG	-	Chr3:87324045-87324064	MsG0380016744.01.T01:intron	35.0%
!!	CAATGTTGTTGTTGCCTTTT+AGG	-	Chr3:87325392-87325411	MsG0380016744.01.T01:CDS	35.0%
!!	TCCCTTCTTAGTCTTTTTCT+GGG	+	Chr3:87325266-87325285	None:intergenic	35.0%
!!!	AGTGGGGGATATTTTTTTTG+GGG	-	Chr3:87323239-87323258	MsG0380016744.01.T01:intron	35.0%
!!!	ATATTTTTTTTGGGGTACCG+GGG	-	Chr3:87323247-87323266	MsG0380016744.01.T01:intron	35.0%
!!!	GAGTGGGGGATATTTTTTTT+GGG	-	Chr3:87323238-87323257	MsG0380016744.01.T01:intron	35.0%
!!!	GATATTTTTTTTGGGGTACC+GGG	-	Chr3:87323246-87323265	MsG0380016744.01.T01:intron	35.0%
!!!	GGATATTTTTTTTGGGGTAC+CGG	-	Chr3:87323245-87323264	MsG0380016744.01.T01:intron	35.0%
!!!	TGAGTGGGGGATATTTTTTT+TGG	-	Chr3:87323237-87323256	MsG0380016744.01.T01:intron	35.0%
	ACAACAATGCAACAGCCATT+GGG	-	Chr3:87324917-87324936	MsG0380016744.01.T01:intron	40.0%
	ACAGGCAGCTATCAACATTA+TGG	-	Chr3:87323351-87323370	MsG0380016744.01.T01:intron	40.0%
	ACTCTTGCAGTTCTTTGCTT+GGG	+	Chr3:87322002-87322021	None:intergenic	40.0%
	ACTTGTCTAACTGATATCCC+TGG	+	Chr3:87324066-87324085	None:intergenic	40.0%
	AGAAGAATCAACACTGTTCC+AGG	+	Chr3:87323790-87323809	None:intergenic	40.0%
	AGATGAGAGGAGACTAAAGA+AGG	+	Chr3:87325077-87325096	None:intergenic	40.0%
	AGGAAAACATGCAGTCAGTA+AGG	-	Chr3:87324628-87324647	MsG0380016744.01.T01:intron	40.0%
	AGTATCAGGAAAACATGGGT+TGG	-	Chr3:87323192-87323211	MsG0380016744.01.T01:intron	40.0%
	ATACACTTTGAATTTGCCGG+TGG	+	Chr3:87322321-87322340	None:intergenic	40.0%
	CAAAACAGGACAAACCTCAA+AGG	-	Chr3:87324961-87324980	MsG0380016744.01.T01:intron	40.0%
	CAGTAAGGGATCTCAATAGT+TGG	-	Chr3:87324643-87324662	MsG0380016744.01.T01:intron	40.0%
	CATTAGTTGGATGGATCAGA+TGG	+	Chr3:87324734-87324753	None:intergenic	40.0%
	CCAATAGAGTGTACTAAGGA+TGG	+	Chr3:87323079-87323098	None:intergenic	40.0%
	CCATCCTTAGTACACTCTAT+TGG	-	Chr3:87323076-87323095	MsG0380016744.01.T01:intron	40.0%
	CTCTCTTCCCTTAAATCTTC+CGG	+	Chr3:87323815-87323834	None:intergenic	40.0%
	CTTCTTGCCGGAAGATTTAA+GGG	-	Chr3:87323805-87323824	MsG0380016744.01.T01:intron	40.0%
	GATCAAAAGACTGTTGATGC+TGG	-	Chr3:87325447-87325466	MsG0380016744.01.T01:CDS	40.0%
	GATGGAGAAATGGGAAAGTA+TGG	-	Chr3:87322457-87322476	MsG0380016744.01.T01:intron	40.0%
	GCTCAGAACGATAAGTTTGA+TGG	+	Chr3:87324790-87324809	None:intergenic	40.0%
	GGAAAACATGCAGTCAGTAA+GGG	-	Chr3:87324629-87324648	MsG0380016744.01.T01:intron	40.0%
	GGGACTCCATTAATCTTGAA+TGG	+	Chr3:87325139-87325158	None:intergenic	40.0%
	GGTTACATACAACCAATCTC+AGG	+	Chr3:87323928-87323947	None:intergenic	40.0%
	GTTAGAAAGTGAGTTGCTGT+TGG	-	Chr3:87324185-87324204	MsG0380016744.01.T01:intron	40.0%
	GTTCGGTAAATCACTGTGTT+TGG	-	Chr3:87324214-87324233	MsG0380016744.01.T01:intron	40.0%
	TACTCTTGCAGTTCTTTGCT+TGG	+	Chr3:87322003-87322022	None:intergenic	40.0%
	TCTTCTTGCCGGAAGATTTA+AGG	-	Chr3:87323804-87323823	MsG0380016744.01.T01:intron	40.0%
	TGATCATCCTTCTTCTCTTG+GGG	+	Chr3:87325432-87325451	None:intergenic	40.0%
	TGCTTTCGTCCATGTGTTTA+CGG	-	Chr3:87322844-87322863	MsG0380016744.01.T01:intron	40.0%
	TTGTTCATTCTCACTTCCTC+AGG	-	Chr3:87325112-87325131	MsG0380016744.01.T01:intron	40.0%
!	CATGTTTTCCTTGACTGTTG+CGG	+	Chr3:87324619-87324638	None:intergenic	40.0%
!!	ACAGTGTTGATTCTTCTTGC+CGG	-	Chr3:87323793-87323812	MsG0380016744.01.T01:intron	40.0%
!!	AGCTTTGTTAGTCTGGTGTT+AGG	-	Chr3:87322929-87322948	MsG0380016744.01.T01:intron	40.0%
!!	CTCCCTTCTTAGTCTTTTTC+TGG	+	Chr3:87325267-87325286	None:intergenic	40.0%
!!	CTTTCTGAGCTTTGTTAGTC+TGG	-	Chr3:87322922-87322941	MsG0380016744.01.T01:intron	40.0%
!!	GTACACTCTATTGGTTTAGG+TGG	-	Chr3:87323085-87323104	MsG0380016744.01.T01:intron	40.0%
!!	TTTAGCTTGTGTGCTCTGTT+TGG	-	Chr3:87323015-87323034	MsG0380016744.01.T01:intron	40.0%
!!!	TATTTTTTTTGGGGTACCGG+GGG	-	Chr3:87323248-87323267	MsG0380016744.01.T01:intron	40.0%
	CAACACTGTTCCAGGAGTAA+TGG	+	Chr3:87323782-87323801	None:intergenic	45.0%
	CAACATTATGGATATGCCGG+TGG	-	Chr3:87323363-87323382	MsG0380016744.01.T01:intron	45.0%
	CACAACAATGCAACAGCCAT+TGG	-	Chr3:87324916-87324935	MsG0380016744.01.T01:intron	45.0%
	CCAAGGTAAGTCTTCAAGTC+TGG	+	Chr3:87325498-87325517	None:intergenic	45.0%
	CCAGACTTGAAGACTTACCT+TGG	-	Chr3:87325495-87325514	MsG0380016744.01.T01:CDS	45.0%
	CCCTGATCAATTCAGGGTTA+CGG	+	Chr3:87322028-87322047	None:intergenic	45.0%
	CCGTAACCCTGAATTGATCA+GGG	-	Chr3:87322025-87322044	MsG0380016744.01.T01:CDS	45.0%
	CCTGATTCACACGTCTCAAT+GGG	+	Chr3:87325159-87325178	None:intergenic	45.0%
	CGATACCCCTGATCAATTCA+GGG	+	Chr3:87322034-87322053	None:intergenic	45.0%
	CGTAACCCTGAATTGATCAG+GGG	-	Chr3:87322026-87322045	MsG0380016744.01.T01:CDS	45.0%
	CTCACTGCGAAGTATGGATT+GGG	+	Chr3:87323324-87323343	None:intergenic	45.0%
	CTTTCCTGTTGTTCGTCTCA+GGG	-	Chr3:87323406-87323425	MsG0380016744.01.T01:intron	45.0%
	GAAAAACAACACGAGTGCGA+CGG	+	Chr3:87322897-87322916	None:intergenic	45.0%
	GAAGACCGAACAACTCATTG+TGG	-	Chr3:87324668-87324687	MsG0380016744.01.T01:intron	45.0%
	GATCATCCTTCTTCTCTTGG+GGG	+	Chr3:87325431-87325450	None:intergenic	45.0%
	GGTTCAGTCAAGTACGATGT+TGG	-	Chr3:87323273-87323292	MsG0380016744.01.T01:intron	45.0%
	GTAAACACATGGACGAAAGC+AGG	+	Chr3:87322845-87322864	None:intergenic	45.0%
	GTAACGAGAAGAAGTCCAGA+AGG	+	Chr3:87323858-87323877	None:intergenic	45.0%
	TCTGGACTTCTTCTCGTTAC+CGG	-	Chr3:87323858-87323877	MsG0380016744.01.T01:intron	45.0%
	TTCGTCCATGTGTTTACGGT+CGG	-	Chr3:87322848-87322867	MsG0380016744.01.T01:intron	45.0%
	TTTCCTGTTGTTCGTCTCAG+GGG	-	Chr3:87323407-87323426	MsG0380016744.01.T01:intron	45.0%
	TTTCTCAAGCAGCTTCCTTC+TGG	-	Chr3:87323840-87323859	MsG0380016744.01.T01:intron	45.0%
!	AAAGTGAGTTGCTGTTGGAG+GGG	-	Chr3:87324190-87324209	MsG0380016744.01.T01:intron	45.0%
!	AGAAAGTGAGTTGCTGTTGG+AGG	-	Chr3:87324188-87324207	MsG0380016744.01.T01:intron	45.0%
!	CAAGTCTGGAACACTGTCAA+TGG	+	Chr3:87325484-87325503	None:intergenic	45.0%
!	CCTGAATTGATCAGGGGTAT+CGG	-	Chr3:87322032-87322051	MsG0380016744.01.T01:CDS	45.0%
!	GAAAGTGAGTTGCTGTTGGA+GGG	-	Chr3:87324189-87324208	MsG0380016744.01.T01:intron	45.0%
!	GAAGATTGGTCAGAGATGAG+AGG	+	Chr3:87325090-87325109	None:intergenic	45.0%
!!	AGGAAAACATGGGTTGGCTT+TGG	-	Chr3:87323198-87323217	MsG0380016744.01.T01:intron	45.0%
!!	CGAGTTCTTTGAGGCAGATA+AGG	-	Chr3:87325291-87325310	MsG0380016744.01.T01:intron	45.0%
!!	GGGGTATCGGAAAATACTCT+AGG	-	Chr3:87322045-87322064	MsG0380016744.01.T01:CDS	45.0%
!!	GTTCTTTGAGGCAGATAAGG+AGG	-	Chr3:87325294-87325313	MsG0380016744.01.T01:intron	45.0%
!!!	ATTTTTTTTGGGGTACCGGG+GGG	-	Chr3:87323249-87323268	MsG0380016744.01.T01:intron	45.0%
	AACAACAGGAAAGGAGGAGG+GGG	+	Chr3:87323399-87323418	None:intergenic	50.0%
	AACTTAGGTGGCTTCTCGAC+CGG	+	Chr3:87322164-87322183	None:intergenic	50.0%
	ACCTACCGACCGTAAACACA+TGG	+	Chr3:87322856-87322875	None:intergenic	50.0%
	ACCTGCCTTCAAGGAAAACC+TGG	+	Chr3:87325523-87325542	None:intergenic	50.0%
	ACGAACAACAGGAAAGGAGG+AGG	+	Chr3:87323402-87323421	None:intergenic	50.0%
	CATTATGGATATGCCGGTGG+CGG	-	Chr3:87323366-87323385	MsG0380016744.01.T01:intron	50.0%
	CCCATTGAGACGTGTGAATC+AGG	-	Chr3:87325156-87325175	MsG0380016744.01.T01:intron	50.0%
	CCGATACCCCTGATCAATTC+AGG	+	Chr3:87322035-87322054	None:intergenic	50.0%
	CCTGAGACGAACAACAGGAA+AGG	+	Chr3:87323408-87323427	None:intergenic	50.0%
	CCTTTCCTGTTGTTCGTCTC+AGG	-	Chr3:87323405-87323424	MsG0380016744.01.T01:intron	50.0%
	CGAACAACAGGAAAGGAGGA+GGG	+	Chr3:87323401-87323420	None:intergenic	50.0%
	GAACAACAGGAAAGGAGGAG+GGG	+	Chr3:87323400-87323419	None:intergenic	50.0%
	GAGACGAACAACAGGAAAGG+AGG	+	Chr3:87323405-87323424	None:intergenic	50.0%
	GAGTGGCTTCTTCACATCGT+CGG	+	Chr3:87322195-87322214	None:intergenic	50.0%
	GCCGTAACCCTGAATTGATC+AGG	-	Chr3:87322024-87322043	MsG0380016744.01.T01:CDS	50.0%
	GCCTGATTCACACGTCTCAA+TGG	+	Chr3:87325160-87325179	None:intergenic	50.0%
	GCTCACTGCGAAGTATGGAT+TGG	+	Chr3:87323325-87323344	None:intergenic	50.0%
	GGCTGTTGCATTGTTGTGCA+AGG	+	Chr3:87324914-87324933	None:intergenic	50.0%
	GTGACGAACCTGAGCTTAGT+GGG	+	Chr3:87322239-87322258	None:intergenic	50.0%
	TCAAGGAAAACCTGGCACCA+AGG	+	Chr3:87325515-87325534	None:intergenic	50.0%
	TCCATGTGTTTACGGTCGGT+AGG	-	Chr3:87322852-87322871	MsG0380016744.01.T01:intron	50.0%
	TTCAGGGCTTCCATTACTCC+TGG	-	Chr3:87323769-87323788	MsG0380016744.01.T01:CDS	50.0%
	TTCCTGTTGTTCGTCTCAGG+GGG	-	Chr3:87323408-87323427	MsG0380016744.01.T01:intron	50.0%
!!	AACCTGAGCTTAGTGGGCTT+TGG	+	Chr3:87322233-87322252	None:intergenic	50.0%
!!	CATCGATTCCGCAACAGTCA+AGG	-	Chr3:87324608-87324627	MsG0380016744.01.T01:intron	50.0%
!!	GCTTTGGCTTGTGCTTGTTG+CGG	+	Chr3:87322217-87322236	None:intergenic	50.0%
!!	TGAAGACTTACCTTGGTGCC+AGG	-	Chr3:87325502-87325521	MsG0380016744.01.T01:CDS	50.0%
!!	TGGTGCCAGGTTTTCCTTGA+AGG	-	Chr3:87325515-87325534	MsG0380016744.01.T01:CDS	50.0%
!!!	TTTTTTTTGGGGTACCGGGG+GGG	-	Chr3:87323250-87323269	MsG0380016744.01.T01:intron	50.0%
	AGCCAAAGCCCACTAAGCTC+AGG	-	Chr3:87322228-87322247	MsG0380016744.01.T01:intron	55.0%
	AGGGAAAGAACCACCGTGCT+TGG	+	Chr3:87322111-87322130	None:intergenic	55.0%
	AGGTGTGAAGCCACACGAGT+TGG	-	Chr3:87325539-87325558	MsG0380016744.01.T01:CDS	55.0%
	AGTGCTCCCCCAAGAGAAGA+AGG	-	Chr3:87325422-87325441	MsG0380016744.01.T01:CDS	55.0%
	CACATGGACGAAAGCAGGTC+AGG	+	Chr3:87322840-87322859	None:intergenic	55.0%
	CATACTTCGCAGTGAGCAGC+GGG	-	Chr3:87323328-87323347	MsG0380016744.01.T01:intron	55.0%
	CCATACTTCGCAGTGAGCAG+CGG	-	Chr3:87323327-87323346	MsG0380016744.01.T01:intron	55.0%
	CTGCCATGTACCACAAGCGT+GGG	-	Chr3:87322069-87322088	MsG0380016744.01.T01:CDS	55.0%
	GGGAGAGAGCGAGTTCTTTG+AGG	-	Chr3:87325282-87325301	MsG0380016744.01.T01:intron	55.0%
	GGTGACGAACCTGAGCTTAG+TGG	+	Chr3:87322240-87322259	None:intergenic	55.0%
	TCGGCGGGGTAAAACTTAGG+TGG	+	Chr3:87322176-87322195	None:intergenic	55.0%
	TCGTCGGCGGGGTAAAACTT+AGG	+	Chr3:87322179-87322198	None:intergenic	55.0%
	TCTGCCATGTACCACAAGCG+TGG	-	Chr3:87322068-87322087	MsG0380016744.01.T01:CDS	55.0%
	TGGCTTCACACCTGCCTTCA+AGG	+	Chr3:87325532-87325551	None:intergenic	55.0%
	TGGCTTCTTCACATCGTCGG+CGG	+	Chr3:87322192-87322211	None:intergenic	55.0%
	TGGGCCATCAAAGCCAAGCA+CGG	-	Chr3:87322095-87322114	MsG0380016744.01.T01:CDS	55.0%
!	GCCAGGTTTTCCTTGAAGGC+AGG	-	Chr3:87325519-87325538	MsG0380016744.01.T01:CDS	55.0%
!!	ACCACCGTGCTTGGCTTTGA+TGG	+	Chr3:87322102-87322121	None:intergenic	55.0%
!!	GTTGCTGTTGGAGGGGTGTT+CGG	-	Chr3:87324197-87324216	MsG0380016744.01.T01:intron	55.0%
!!!	TTTTTTTGGGGTACCGGGGG+GGG	-	Chr3:87323251-87323270	MsG0380016744.01.T01:intron	55.0%
	AGCCCCCTGAGACGAACAAC+AGG	+	Chr3:87323413-87323432	None:intergenic	60.0%
	CCGCTGCTCACTGCGAAGTA+TGG	+	Chr3:87323330-87323349	None:intergenic	60.0%
	GAGCCCACGCTTGTGGTACA+TGG	+	Chr3:87322075-87322094	None:intergenic	60.0%
	GCCATCAAAGCCAAGCACGG+TGG	-	Chr3:87322098-87322117	MsG0380016744.01.T01:CDS	60.0%
	GCTTCTTCACATCGTCGGCG+GGG	+	Chr3:87322190-87322209	None:intergenic	60.0%
	GGCTTCTTCACATCGTCGGC+GGG	+	Chr3:87322191-87322210	None:intergenic	60.0%
	GTACCACAAGCGTGGGCTCT+GGG	-	Chr3:87322076-87322095	MsG0380016744.01.T01:CDS	60.0%
	TACTTGACTGAACCCCCCCC+CGG	+	Chr3:87323267-87323286	None:intergenic	60.0%
	TAGCGACGGGATCGTGACGA+GGG	+	Chr3:87322130-87322149	None:intergenic	60.0%
	TCGTCACGATCCCGTCGCTA+AGG	-	Chr3:87322130-87322149	MsG0380016744.01.T01:intron	60.0%
	TGTACCACAAGCGTGGGCTC+TGG	-	Chr3:87322075-87322094	MsG0380016744.01.T01:CDS	60.0%
	TTAGCGACGGGATCGTGACG+AGG	+	Chr3:87322131-87322150	None:intergenic	60.0%
!	ATCGTTCTGAGCGGCGACCA+TGG	-	Chr3:87324798-87324817	MsG0380016744.01.T01:intron	60.0%
!	GGCTTGTGCTTGTTGCGGAG+TGG	+	Chr3:87322212-87322231	None:intergenic	60.0%
!	TCGTTCTGAGCGGCGACCAT+GGG	-	Chr3:87324799-87324818	MsG0380016744.01.T01:intron	60.0%
!!!	TTTTTTGGGGTACCGGGGGG+GGG	-	Chr3:87323252-87323271	MsG0380016744.01.T01:intron	60.0%
	ACAGGAAAGGAGGAGGGGGC+TGG	+	Chr3:87323395-87323414	None:intergenic	65.0%
	CGGAGCTGCAGCCTTAGCGA+CGG	+	Chr3:87322144-87322163	None:intergenic	65.0%
	CGTCGCTAAGGCTGCAGCTC+CGG	-	Chr3:87322142-87322161	MsG0380016744.01.T01:intron	65.0%
	GGAGCTGCAGCCTTAGCGAC+GGG	+	Chr3:87322143-87322162	None:intergenic	65.0%
	TTCGCAGTGAGCAGCGGGAC+AGG	-	Chr3:87323333-87323352	MsG0380016744.01.T01:intron	65.0%
!	CGTTCTGAGCGGCGACCATG+GGG	-	Chr3:87324800-87324819	MsG0380016744.01.T01:intron	65.0%
!	GTTCTGAGCGGCGACCATGG+GGG	-	Chr3:87324801-87324820	MsG0380016744.01.T01:intron	65.0%
	ACAGCTTCGGGGCTCCCCCA+TGG	+	Chr3:87324818-87324837	None:intergenic	70.0%
	TGGCCCAGAGCCCACGCTTG+TGG	+	Chr3:87322082-87322101	None:intergenic	70.0%
	AGGGGGCTGGAAGCCGCCAC+CGG	+	Chr3:87323382-87323401	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	87321993	87325569	87321993	ID=MsG0380016744.01;Name=MsG0380016744.01
Chr3	mRNA	87321993	87325569	87321993	ID=MsG0380016744.01.T01;Parent=MsG0380016744.01;Name=MsG0380016744.01.T01;_AED=0.50;_eAED=0.53;_QI=0\|0\|0\|1\|1\|1\|4\|0\|218
Chr3	exon	87325313	87325569	87325313	ID=MsG0380016744.01.T01:exon:22130;Parent=MsG0380016744.01.T01
Chr3	exon	87323683	87323788	87323683	ID=MsG0380016744.01.T01:exon:22129;Parent=MsG0380016744.01.T01
Chr3	exon	87322247	87322384	87322247	ID=MsG0380016744.01.T01:exon:22128;Parent=MsG0380016744.01.T01
Chr3	exon	87321993	87322148	87321993	ID=MsG0380016744.01.T01:exon:22127;Parent=MsG0380016744.01.T01
Chr3	CDS	87325313	87325569	87325313	ID=MsG0380016744.01.T01:cds;Parent=MsG0380016744.01.T01
Chr3	CDS	87323683	87323788	87323683	ID=MsG0380016744.01.T01:cds;Parent=MsG0380016744.01.T01
Chr3	CDS	87322247	87322384	87322247	ID=MsG0380016744.01.T01:cds;Parent=MsG0380016744.01.T01
Chr3	CDS	87321993	87322148	87321993	ID=MsG0380016744.01.T01:cds;Parent=MsG0380016744.01.T01

Gene Sequence

>MsG0380016744.01.T01

ATGGCACCCAAGCAAAGAACTGCAAGAGTAAGCCGTAACCCTGAATTGATCAGGGGTATCGGAAAATACTCTAGGTCTGCCATGTACCACAAGCGTGGGCTCTGGGCCATCAAAGCCAAGCACGGTGGTTCTTTCCCTCGTCACGATCCCGTCGCTAAGGCTGCAGCTCCGGTCGAGAAGCCACCTAAGTTTTACCCCGCCGACGATGTGAAGAAGCCACTCCGCAACAAGCACAAGCCAAAGCCCACTAAGCTCAGGGCTTCCATTACTCCTGGAACAGTGTTGATTCTTCTTGCCGGAAGATTTAAGGGAAGAGAGTTGTGTTTCTCAAGCAGCTTCCTTCTGGACTTCTTCTCGTTACCGGCATATGTTATCGGCACATCAACCAAAGTAGACATTTCTTCGGTTAATGTCGACAAGTTTGATGACAAGTACTTCTCAAAGGAATCCCAGAAAAAGACTAAGAAGGGAGAGAGCGAGTTCTTTGAGGCAGATAAGGAGGATAAAAAAGTGCTCCCCCAAGAGAAGAAGGATGATCAAAAGACTGTTGATGCTGGTTTGTTAAAAGCCATTGACAGTGTTCCAGACTTGAAGACTTACCTTGGTGCCAGGTTTTCCTTGAAGGCAGGTGTGAAGCCACACGAGTTGGTCTTCTAG

Protein sequence

>MsG0380016744.01.T01

MAPKQRTARVSRNPELIRGIGKYSRSAMYHKRGLWAIKAKHGGSFPRHDPVAKAAAPVEKPPKFYPADDVKKPLRNKHKPKPTKLRASITPGTVLILLAGRFKGRELCFSSSFLLDFFSLPAYVIGTSTKVDISSVNVDKFDDKYFSKESQKKTKKGESEFFEADKEDKKVLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF*