AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034480.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034480.01.T01 MTR_6g069600 97.787 497 11 0 1 497 1 497 0.0 1016
MsG0680034480.01.T01 MTR_8g107370 80.040 496 96 2 1 496 1 493 0.0 803
MsG0680034480.01.T01 MTR_8g107370 81.198 484 90 1 13 496 5 487 0.0 801
MsG0680034480.01.T01 MTR_8g107370 79.957 464 90 2 1 464 1 461 0.0 749
MsG0680034480.01.T01 MTR_8g107370 80.866 439 81 2 1 439 1 436 0.0 718
MsG0680034480.01.T01 MTR_1g014690 33.019 106 69 1 290 393 75 180 8.92e-13 69.3
MsG0680034480.01.T01 MTR_1g014690 33.019 106 69 1 290 393 130 235 1.12e-12 69.7
MsG0680034480.01.T01 MTR_3g032530 31.034 116 78 1 280 393 86 201 8.32e-12 67.0
MsG0680034480.01.T01 MTR_3g032530 31.034 116 78 1 280 393 43 158 9.29e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034480.01.T01 AT1G73600 71.901 484 136 0 13 496 6 489 0.0 752
MsG0680034480.01.T01 AT1G73600 71.901 484 136 0 13 496 20 503 0.0 751
MsG0680034480.01.T01 AT1G48600 72.016 486 136 0 12 497 6 491 0.0 745
MsG0680034480.01.T01 AT3G18000 71.020 490 142 0 7 496 1 490 0.0 744
MsG0680034480.01.T01 AT1G48600 72.574 474 130 0 24 497 2 475 0.0 728
MsG0680034480.01.T01 AT5G13710 29.697 165 103 4 259 411 55 218 2.67e-13 71.6
MsG0680034480.01.T01 AT5G13710 29.697 165 103 4 259 411 55 218 2.67e-13 71.6
MsG0680034480.01.T01 AT1G64970 29.808 104 71 1 292 393 130 233 2.59e-11 65.5

Find 89 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTCTATGAACATGTTTA+TGG 0.176357 6:+88308510 MsG0680034480.01.T01:CDS
TTCACCTATTACTCTTATTA+TGG 0.203566 6:+88310796 MsG0680034480.01.T01:three_prime_UTR
CCTTACTTTGATGTGTAATA+AGG 0.238801 6:-88309157 None:intergenic
TGCTGTTGATCAAACCAATT+TGG 0.240782 6:+88309906 MsG0680034480.01.T01:CDS
TTGATTTGATATTCTCAAAT+TGG 0.248443 6:+88307333 MsG0680034480.01.T01:CDS
AGCTAGAGAAATCATGTTTA+TGG 0.260404 6:-88309028 None:intergenic
CTTCTCCATTCTCTCATATA+TGG 0.261877 6:+88304264 MsG0680034480.01.T01:exon
TCTCTCATATATGGCTAGTT+TGG 0.281400 6:+88304273 MsG0680034480.01.T01:exon
TTGCAGAATGAAAATAATAA+TGG 0.286982 6:+88307239 MsG0680034480.01.T01:intron
TCCTTTGAGCTTTCTCTTGT+GGG 0.294619 6:+88308236 MsG0680034480.01.T01:CDS
GTGTAGCTGGTGAGCAGATA+TGG 0.296797 6:+88310608 MsG0680034480.01.T01:CDS
CTAGATGTTGGTTGTGGTAT+TGG 0.308873 6:+88308946 MsG0680034480.01.T01:CDS
GAAACCATAATAAGAGTAAT+AGG 0.323222 6:-88310800 None:intergenic
ACATGAACTTGACATTCTTA+TGG 0.327278 6:-88307265 None:intergenic
TGGAAGATTTACAGCTGAAT+TGG 0.333381 6:+88306871 MsG0680034480.01.T01:CDS
TCATGCAGATTTGTTGGATA+TGG 0.335290 6:+88308412 MsG0680034480.01.T01:intron
CCTTCAGAAATATGCAAGTT+TGG 0.346855 6:-88307305 None:intergenic
AATACAATCCAACTCACTAT+AGG 0.347505 6:+88307736 MsG0680034480.01.T01:CDS
GAATCTTGTTTCCACCAATC+TGG 0.358429 6:+88307699 MsG0680034480.01.T01:CDS
TCTTTGTCATGCAGATTTGT+TGG 0.362351 6:+88308406 MsG0680034480.01.T01:intron
GTTAAATCACAAGATGATAG+AGG 0.369519 6:+88308441 MsG0680034480.01.T01:CDS
GTCTCTCTTCTTTGTCGAGA+TGG 0.371915 6:-88304605 None:intergenic
CTCCTTTGAGCTTTCTCTTG+TGG 0.372126 6:+88308235 MsG0680034480.01.T01:CDS
ATACAATCCAACTCACTATA+GGG 0.384922 6:+88307737 MsG0680034480.01.T01:CDS
AGGGAAATTGTGGCAAAGTT+AGG 0.389582 6:+88308901 MsG0680034480.01.T01:CDS
GAGTGTGTGACAAACCAAAT+TGG 0.399779 6:-88309920 None:intergenic
TTAGAGCTTGGAGCAGGTAT+TGG 0.405980 6:+88306851 MsG0680034480.01.T01:CDS
CAAACCTTAGTGTAAAATCT+TGG 0.408255 6:-88307762 None:intergenic
GTTCTTGAAAACTCTACAAA+TGG 0.411827 6:+88310013 MsG0680034480.01.T01:intron
GTCAAATGGTTAAATGTTGA+TGG 0.412539 6:+88307660 MsG0680034480.01.T01:CDS
TGACATGAAAGCATATTATC+AGG 0.414876 6:+88309404 MsG0680034480.01.T01:CDS
GTGAAGTGCAAAGAAGTTAC+TGG 0.416072 6:+88304526 MsG0680034480.01.T01:CDS
TCTCTCTTCTTTGTCGAGAT+GGG 0.418673 6:-88304604 None:intergenic
TCACAGATGCTTGAGAATGC+TGG 0.438992 6:+88309868 MsG0680034480.01.T01:intron
TTCTCTTTGAATCTCCAGAT+TGG 0.440419 6:-88307713 None:intergenic
TGTCATATGAGTGATGATAA+TGG 0.457058 6:+88308209 MsG0680034480.01.T01:CDS
TTTGTGAGCACAGGAGGACT+TGG 0.457900 6:+88308540 MsG0680034480.01.T01:CDS
TGTAGCTGGTGAGCAGATAT+GGG 0.458742 6:+88310609 MsG0680034480.01.T01:CDS
TGAAGTCCACAGCAAGCAAT+TGG 0.460367 6:-88306907 None:intergenic
GTCATATGAGTGATGATAAT+GGG 0.461100 6:+88308210 MsG0680034480.01.T01:CDS
TAGCTGAAAGGATGGTCAAA+TGG 0.462289 6:+88307646 MsG0680034480.01.T01:CDS
TAAAATGATCTGAACAATGT+TGG 0.463358 6:-88309270 None:intergenic
ATAATGAAATTGTTGAAAGA+TGG 0.474872 6:+88310566 MsG0680034480.01.T01:CDS
TCTTTGAATCTCCAGATTGG+TGG 0.475051 6:-88307710 None:intergenic
AAATAAGAAGAATCAAAATC+AGG 0.476569 6:+88308286 MsG0680034480.01.T01:CDS
CTTGCATATTTCTGAAGGAT+CGG 0.493828 6:+88307310 MsG0680034480.01.T01:CDS
GCTGAATTGGCTCAGAAAGC+TGG 0.494705 6:+88306884 MsG0680034480.01.T01:CDS
CTTGGTTCCCTATAGTGAGT+TGG 0.500725 6:-88307744 None:intergenic
TATGAACATGTTTATGGTCA+AGG 0.501805 6:+88308516 MsG0680034480.01.T01:CDS
ACTAGCCATATATGAGAGAA+TGG 0.502014 6:-88304269 None:intergenic
GTTGGTTGTGGTATTGGAGG+TGG 0.503392 6:+88308952 MsG0680034480.01.T01:CDS
CATTTACTTCCATATAAAAG+AGG 0.504157 6:-88310768 None:intergenic
TCTCTATTACCAGCATATGA+AGG 0.509429 6:+88306818 MsG0680034480.01.T01:CDS
GATAATATGCTTTCATGTCA+TGG 0.509905 6:-88309401 None:intergenic
AATCAACCTTCTTGTTCTCA+AGG 0.512925 6:-88310046 None:intergenic
CATAGAGTAAGATATCTTTG+TGG 0.519852 6:-88308497 None:intergenic
ACTGACTATTGCAAAAGTGT+TGG 0.520445 6:+88309327 MsG0680034480.01.T01:CDS
CTAGCTATCGAACGTGCCAT+CGG 0.524887 6:+88309045 MsG0680034480.01.T01:CDS
AAGCAGATGAGAGGTGTAGC+TGG 0.525626 6:+88310595 MsG0680034480.01.T01:CDS
GATGTTGGTTGTGGTATTGG+AGG 0.526855 6:+88308949 MsG0680034480.01.T01:CDS
CATGTATCTTTCAGATGAAG+AGG 0.527858 6:+88307361 MsG0680034480.01.T01:CDS
CCAAACTTGCATATTTCTGA+AGG 0.528360 6:+88307305 MsG0680034480.01.T01:CDS
GGTCAAGGCTTTGTGAGCAC+AGG 0.534562 6:+88308531 MsG0680034480.01.T01:CDS
CATTGAGAGTGCAATAAAGA+AGG 0.534730 6:+88306928 MsG0680034480.01.T01:CDS
GTAATTAAAAGTGTACCTCC+AGG 0.542732 6:-88309306 None:intergenic
CAACACAATTATTAATGGAA+AGG 0.543112 6:-88310717 None:intergenic
AGCTGGCCAATTGCTTGCTG+TGG 0.543614 6:+88306901 MsG0680034480.01.T01:CDS
CTCTTCTTTGTCGAGATGGG+AGG 0.545903 6:-88304601 None:intergenic
CTTGTGGGATGCAAATGCAT+TGG 0.550546 6:+88308251 MsG0680034480.01.T01:CDS
CAAGGCTTTGTGAGCACAGG+AGG 0.555847 6:+88308534 MsG0680034480.01.T01:CDS
TACTGAGTATTTGAGTCCGA+TGG 0.557525 6:-88309061 None:intergenic
ATCAACCTTCTTGTTCTCAA+GGG 0.563447 6:-88310045 None:intergenic
GAAATGAAGAAAGTAATCAA+TGG 0.563809 6:-88304225 None:intergenic
TTAAATCACAAGATGATAGA+GGG 0.564358 6:+88308442 MsG0680034480.01.T01:CDS
AGAAACAACAAGGGAAATTG+TGG 0.570096 6:+88308891 MsG0680034480.01.T01:intron
ATTCTTGAGCAGAAACAACA+AGG 0.575658 6:+88308881 MsG0680034480.01.T01:intron
AAGATGATAGAGGGTTTCAA+AGG 0.577951 6:+88308451 MsG0680034480.01.T01:CDS
TGAAATTGTTGAAAGATGGA+AGG 0.578969 6:+88310570 MsG0680034480.01.T01:CDS
AAATGCCCTTGAGAACAAGA+AGG 0.581850 6:+88310040 MsG0680034480.01.T01:CDS
AAAGTACTAGATGTTGGTTG+TGG 0.613287 6:+88308940 MsG0680034480.01.T01:CDS
GAGAAATCATGTTTATGGAG+AGG 0.618544 6:-88309023 None:intergenic
TGGAAGGCTAAGCAGATGAG+AGG 0.635467 6:+88310586 MsG0680034480.01.T01:CDS
TTCTTGAGCAGAAACAACAA+GGG 0.645125 6:+88308882 MsG0680034480.01.T01:intron
AGTTTGGAAGCAATGAAACA+AGG 0.646586 6:+88304289 MsG0680034480.01.T01:CDS
GCAAAGTTAGGACTAAAGCC+AGG 0.647033 6:+88308913 MsG0680034480.01.T01:CDS
TCCCACAAGAGAAAGCTCAA+AGG 0.650134 6:-88308237 None:intergenic
TATAAGTGGTTGAAGCCTGG+AGG 0.668799 6:+88309291 MsG0680034480.01.T01:CDS
GTAGCTGGTGAGCAGATATG+GGG 0.669642 6:+88310610 MsG0680034480.01.T01:CDS
TTTCATTGATGATTTCTCTG+AGG 0.680525 6:+88310067 MsG0680034480.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAAATAATTAAT+AGG - Chr6:88306708-88306727 None:intergenic 0.0%
!! AAATAAGTTAAAAATATGAT+TGG - Chr6:88306576-88306595 None:intergenic 10.0%
!! ATATGTTTATTACATATTAT+AGG + Chr6:88309453-88309472 MsG0680034480.01.T01:intron 10.0%
!! TAAAATAAAATAAATAGAAG+TGG - Chr6:88306532-88306551 None:intergenic 10.0%
!! TTGATATAGTATATTAAAAT+AGG - Chr6:88306135-88306154 None:intergenic 10.0%
!!! ATTAACAAGTTAATTTTTTA+AGG - Chr6:88304944-88304963 None:intergenic 10.0%
!!! TTAACAAGTTAATTTTTTAA+GGG - Chr6:88304943-88304962 None:intergenic 10.0%
!! AAAAACAACACAATTATTAA+TGG - Chr6:88310725-88310744 None:intergenic 15.0%
!! AAAAAGGAAAATAATGAATT+TGG - Chr6:88309204-88309223 None:intergenic 15.0%
!! AAAATATTGTATGATATTCA+AGG - Chr6:88307220-88307239 None:intergenic 15.0%
!! AATGTTCTATGAATTTATAT+AGG + Chr6:88309242-88309261 MsG0680034480.01.T01:intron 15.0%
!! ATAACTAAATGTTACAAAAA+AGG - Chr6:88309220-88309239 None:intergenic 15.0%
!! ATATAATTACATTAACAACA+AGG - Chr6:88309437-88309456 None:intergenic 15.0%
!! CCAATTTAAATGTATATTTA+GGG + Chr6:88305277-88305296 MsG0680034480.01.T01:intron 15.0%
!! CCTAAATATACATTTAAATT+GGG - Chr6:88305279-88305298 None:intergenic 15.0%
!! GGTATTTATCAAAATAAAAT+TGG + Chr6:88307166-88307185 MsG0680034480.01.T01:intron 15.0%
!! TAGTATAAAACAAAGTAATA+AGG - Chr6:88309945-88309964 None:intergenic 15.0%
!! TATATATCATACATAGATTA+AGG + Chr6:88304440-88304459 MsG0680034480.01.T01:intron 15.0%
!! TATGTAAGAATTCTAATAAA+TGG - Chr6:88308626-88308645 None:intergenic 15.0%
!! TTTAATAAATTGTAGTTACT+TGG + Chr6:88305028-88305047 MsG0680034480.01.T01:intron 15.0%
!! TTTGTATTTATAAAGTAGTT+TGG + Chr6:88306398-88306417 MsG0680034480.01.T01:intron 15.0%
!!! ATAATTGTAATGATTTTTTC+AGG + Chr6:88304489-88304508 MsG0680034480.01.T01:intron 15.0%
!!! ATCTATTTTAAATTACACAT+AGG + Chr6:88306790-88306809 MsG0680034480.01.T01:intron 15.0%
!!! TACTAACTAAATTTTGTTTA+CGG + Chr6:88306479-88306498 MsG0680034480.01.T01:intron 15.0%
!!! TCTTTTATGTTGTTAATTAT+AGG + Chr6:88306279-88306298 MsG0680034480.01.T01:intron 15.0%
!!! TTAACATGTTATTTTCTAAT+TGG + Chr6:88306673-88306692 MsG0680034480.01.T01:intron 15.0%
!!! TTTTTATAAACTCTGAAAAT+TGG + Chr6:88310231-88310250 MsG0680034480.01.T01:intron 15.0%
!!! TTTTTGAAATCTTCATTTTT+AGG + Chr6:88310537-88310556 MsG0680034480.01.T01:intron 15.0%
!! AAACAATAACATGTCTAATA+GGG - Chr6:88307089-88307108 None:intergenic 20.0%
!! AAAGTTTGATTGATACATAT+GGG + Chr6:88304796-88304815 MsG0680034480.01.T01:intron 20.0%
!! AAATAAGAAGAATCAAAATC+AGG + Chr6:88308286-88308305 MsG0680034480.01.T01:CDS 20.0%
!! AACAACATAAAAGAAAATTG+TGG - Chr6:88306273-88306292 None:intergenic 20.0%
!! ACAACATAAAAGAAAATTGT+GGG - Chr6:88306272-88306291 None:intergenic 20.0%
!! AGATGTAATCACAATAAAAA+CGG - Chr6:88308734-88308753 None:intergenic 20.0%
!! ATAATGAAATTGTTGAAAGA+TGG + Chr6:88310566-88310585 MsG0680034480.01.T01:CDS 20.0%
!! ATTATTAAAATCGAGAGTTT+AGG - Chr6:88310317-88310336 None:intergenic 20.0%
!! CAATATGAATCCAATATTTA+TGG + Chr6:88305137-88305156 MsG0680034480.01.T01:intron 20.0%
!! CCCAATTTAAATGTATATTT+AGG + Chr6:88305276-88305295 MsG0680034480.01.T01:intron 20.0%
!! CCCTAAATATACATTTAAAT+TGG - Chr6:88305280-88305299 None:intergenic 20.0%
!! GTGCTTCATATATATTTATA+GGG - Chr6:88306975-88306994 None:intergenic 20.0%
!! TAAAGTTTGATTGATACATA+TGG + Chr6:88304795-88304814 MsG0680034480.01.T01:intron 20.0%
!! TAATTAGACACATACATTAA+GGG - Chr6:88307575-88307594 None:intergenic 20.0%
!! TACACCAATTTATTATTCTT+GGG + Chr6:88309963-88309982 MsG0680034480.01.T01:intron 20.0%
!! TACATCAAAATTTAAGAGTT+TGG - Chr6:88310483-88310502 None:intergenic 20.0%
!! TATAATCAAACAATTGTTGT+TGG - Chr6:88307818-88307837 None:intergenic 20.0%
!! TCGTTGTATATTATTAACTT+TGG + Chr6:88306052-88306071 MsG0680034480.01.T01:intron 20.0%
!! TGCTTCATATATATTTATAG+GGG - Chr6:88306974-88306993 None:intergenic 20.0%
!! TTAAATACCTACATGAAAAA+GGG - Chr6:88308185-88308204 None:intergenic 20.0%
!! TTGCAGAATGAAAATAATAA+TGG + Chr6:88307239-88307258 MsG0680034480.01.T01:intron 20.0%
!! TTTAAATACCTACATGAAAA+AGG - Chr6:88308186-88308205 None:intergenic 20.0%
!!! AAAGAAACATCATTTTTTCT+TGG - Chr6:88310647-88310666 None:intergenic 20.0%
!!! ACTAACTAAATTTTGTTTAC+GGG + Chr6:88306480-88306499 MsG0680034480.01.T01:intron 20.0%
!!! AGATCTACATTTTACTAATT+TGG + Chr6:88306236-88306255 MsG0680034480.01.T01:intron 20.0%
!!! AGTTTTTTGTTTTTCTATGA+AGG + Chr6:88307386-88307405 MsG0680034480.01.T01:intron 20.0%
!!! ATCTACATTTTACTAATTTG+GGG + Chr6:88306238-88306257 MsG0680034480.01.T01:intron 20.0%
!!! CTAATATGTATTTTAAAGAG+AGG + Chr6:88305651-88305670 MsG0680034480.01.T01:intron 20.0%
!!! CTTCTTTTAATTTAACTAAG+TGG + Chr6:88305775-88305794 MsG0680034480.01.T01:intron 20.0%
!!! GATCTACATTTTACTAATTT+GGG + Chr6:88306237-88306256 MsG0680034480.01.T01:intron 20.0%
!!! TACTTGGTGTTAATTATATT+TGG + Chr6:88305044-88305063 MsG0680034480.01.T01:intron 20.0%
!!! TTGATTTGATATTCTCAAAT+TGG + Chr6:88307333-88307352 MsG0680034480.01.T01:CDS 20.0%
!!! TTTAAATTGGGTTTTTTAGT+AGG - Chr6:88305267-88305286 None:intergenic 20.0%
!!! TTTTAACCTGAAATTAATCA+AGG - Chr6:88307623-88307642 None:intergenic 20.0%
!!! TTTTTGTCTTGTATTACAAT+TGG + Chr6:88305385-88305404 MsG0680034480.01.T01:intron 20.0%
!!! TTTTTTCCTTGATTAATTTC+AGG + Chr6:88307614-88307633 MsG0680034480.01.T01:intron 20.0%
! AACATAAAAGAAAATTGTGG+GGG - Chr6:88306270-88306289 None:intergenic 25.0%
! AAGATAAAACTCGATATATG+TGG - Chr6:88305804-88305823 None:intergenic 25.0%
! AATAATATGATATGACACAC+TGG - Chr6:88305600-88305619 None:intergenic 25.0%
! ACAACCCAAGAATAATAAAT+TGG - Chr6:88309970-88309989 None:intergenic 25.0%
! ACAACTTGAATTAGAGATAA+AGG + Chr6:88305431-88305450 MsG0680034480.01.T01:intron 25.0%
! AGGTTAAAAATTTAGCTGAA+AGG + Chr6:88307634-88307653 MsG0680034480.01.T01:intron 25.0%
! ATTCTAAATTTGAGTCATCA+TGG - Chr6:88307540-88307559 None:intergenic 25.0%
! CAAACAATAACATGTCTAAT+AGG - Chr6:88307090-88307109 None:intergenic 25.0%
! CAACACAATTATTAATGGAA+AGG - Chr6:88310720-88310739 None:intergenic 25.0%
! CAACATAAAAGAAAATTGTG+GGG - Chr6:88306271-88306290 None:intergenic 25.0%
! CAACTTGAATTAGAGATAAA+GGG + Chr6:88305432-88305451 MsG0680034480.01.T01:intron 25.0%
! CAATTGTTTGATTATAGATG+AGG + Chr6:88307822-88307841 MsG0680034480.01.T01:intron 25.0%
! CATAGCTACATATTTATGAT+TGG + Chr6:88307145-88307164 MsG0680034480.01.T01:intron 25.0%
! CATTTACTTCCATATAAAAG+AGG - Chr6:88310771-88310790 None:intergenic 25.0%
! CCTATACAGATATTTGAAAA+CGG - Chr6:88310396-88310415 None:intergenic 25.0%
! CTACACCAATTTATTATTCT+TGG + Chr6:88309962-88309981 MsG0680034480.01.T01:intron 25.0%
! CTTATTACACATCAAAGTAA+GGG + Chr6:88309158-88309177 MsG0680034480.01.T01:intron 25.0%
! GAAACCATAATAAGAGTAAT+AGG - Chr6:88310803-88310822 None:intergenic 25.0%
! GAAATGAAGAAAGTAATCAA+TGG - Chr6:88304228-88304247 None:intergenic 25.0%
! GAATCCAATATTTATGGATT+TGG + Chr6:88305143-88305162 MsG0680034480.01.T01:intron 25.0%
! GATATTATTGTGAACTTTGA+TGG + Chr6:88308045-88308064 MsG0680034480.01.T01:intron 25.0%
! GGTGCTTCATATATATTTAT+AGG - Chr6:88306976-88306995 None:intergenic 25.0%
! GTAATTAGACACATACATTA+AGG - Chr6:88307576-88307595 None:intergenic 25.0%
! TAAAAATTTAGCTGAAAGGA+TGG + Chr6:88307638-88307657 MsG0680034480.01.T01:CDS 25.0%
! TAAAATGATCTGAACAATGT+TGG - Chr6:88309273-88309292 None:intergenic 25.0%
! TAAATACCTACATGAAAAAG+GGG - Chr6:88308184-88308203 None:intergenic 25.0%
! TAGAAAATAAAGCTTATGCA+TGG - Chr6:88308122-88308141 None:intergenic 25.0%
! TGATCCAAATCCATAAATAT+TGG - Chr6:88305150-88305169 None:intergenic 25.0%
! TGCATTTGATATGCTAAAAA+AGG - Chr6:88305528-88305547 None:intergenic 25.0%
! TTAAAAAATGTGCGTATTCA+AGG + Chr6:88304972-88304991 MsG0680034480.01.T01:intron 25.0%
! TTAAATCACAAGATGATAGA+GGG + Chr6:88308442-88308461 MsG0680034480.01.T01:CDS 25.0%
! TTACTCTATGAACATGTTTA+TGG + Chr6:88308510-88308529 MsG0680034480.01.T01:CDS 25.0%
! TTATGCAAGTTTACAATTGT+TGG + Chr6:88310170-88310189 MsG0680034480.01.T01:intron 25.0%
! TTCACCTATTACTCTTATTA+TGG + Chr6:88310796-88310815 MsG0680034480.01.T01:three_prime_UTR 25.0%
!! TATTTTCTAATTGGAGAACA+AGG + Chr6:88306682-88306701 MsG0680034480.01.T01:intron 25.0%
!! TGGTGTTAATTATATTTGGA+TGG + Chr6:88305048-88305067 MsG0680034480.01.T01:intron 25.0%
!! TGTTCAGATCATTTTATAAG+TGG + Chr6:88309277-88309296 MsG0680034480.01.T01:CDS 25.0%
!!! ATTGTAATGATTTTTTCAGG+TGG + Chr6:88304492-88304511 MsG0680034480.01.T01:intron 25.0%
!!! CCAATTTTATCGTGTTTTAA+CGG + Chr6:88305241-88305260 MsG0680034480.01.T01:intron 25.0%
!!! GTAAGATTTTGAGTTTAAAC+TGG + Chr6:88305477-88305496 MsG0680034480.01.T01:intron 25.0%
!!! TAATTGTGTTGTTTTTAGCT+TGG + Chr6:88310729-88310748 MsG0680034480.01.T01:three_prime_UTR 25.0%
!!! TATTTTGAACCAGTCTAAAT+GGG + Chr6:88305215-88305234 MsG0680034480.01.T01:intron 25.0%
!!! TGAATACGCACATTTTTTAA+TGG - Chr6:88304972-88304991 None:intergenic 25.0%
!!! TGTCTAATTACTTGTTGTTA+AGG + Chr6:88307585-88307604 MsG0680034480.01.T01:intron 25.0%
!!! TTATTTTGAACCAGTCTAAA+TGG + Chr6:88305214-88305233 MsG0680034480.01.T01:intron 25.0%
!!! TTTGATTTACCGTTTTGTTT+CGG + Chr6:88305891-88305910 MsG0680034480.01.T01:intron 25.0%
AAAGACATGTTATAAGGACA+TGG + Chr6:88308069-88308088 MsG0680034480.01.T01:intron 30.0%
AAATTAGTAGCACATACTTC+GGG - Chr6:88304630-88304649 None:intergenic 30.0%
AAGAGAAAGAAGATGCATTA+GGG - Chr6:88305758-88305777 None:intergenic 30.0%
AAGTCAAACATGTTAATGAC+CGG + Chr6:88307988-88308007 MsG0680034480.01.T01:intron 30.0%
AATACAATCCAACTCACTAT+AGG + Chr6:88307736-88307755 MsG0680034480.01.T01:CDS 30.0%
ACATACATTAAGGGACAAAA+TGG - Chr6:88307566-88307585 None:intergenic 30.0%
ACATGAACTTGACATTCTTA+TGG - Chr6:88307268-88307287 None:intergenic 30.0%
AGAAAGATAACTTAGAGAGA+AGG - Chr6:88305684-88305703 None:intergenic 30.0%
AGCTAGAGAAATCATGTTTA+TGG - Chr6:88309031-88309050 None:intergenic 30.0%
ATAATCGACATGAAATCAGA+CGG - Chr6:88308767-88308786 None:intergenic 30.0%
ATACAATCCAACTCACTATA+GGG + Chr6:88307737-88307756 MsG0680034480.01.T01:CDS 30.0%
CAAACCTTAGTGTAAAATCT+TGG - Chr6:88307765-88307784 None:intergenic 30.0%
CACATCTTCAATATGAAGTT+TGG - Chr6:88306997-88307016 None:intergenic 30.0%
CATAGAGTAAGATATCTTTG+TGG - Chr6:88308500-88308519 None:intergenic 30.0%
CCGTTAAAACACGATAAAAT+TGG - Chr6:88305244-88305263 None:intergenic 30.0%
CCTTACTTTGATGTGTAATA+AGG - Chr6:88309160-88309179 None:intergenic 30.0%
CCTTATTACACATCAAAGTA+AGG + Chr6:88309157-88309176 MsG0680034480.01.T01:intron 30.0%
GAAATTAGTAGCACATACTT+CGG - Chr6:88304631-88304650 None:intergenic 30.0%
GAATAGTCAGTTAGTTGTAT+AGG - Chr6:88304665-88304684 None:intergenic 30.0%
GACTAGAATATTCATGTCTT+TGG - Chr6:88305997-88306016 None:intergenic 30.0%
GACTTCATTTAATCCAAATC+CGG - Chr6:88307422-88307441 None:intergenic 30.0%
GATAATATGCTTTCATGTCA+TGG - Chr6:88309404-88309423 None:intergenic 30.0%
GATGGTAAAGACATGTTATA+AGG + Chr6:88308063-88308082 MsG0680034480.01.T01:intron 30.0%
GCAGAGTATATAAAAAAGAG+AGG + Chr6:88309369-88309388 MsG0680034480.01.T01:CDS 30.0%
GGTTGTATTGTGGTTTATTA+AGG + Chr6:88305453-88305472 MsG0680034480.01.T01:intron 30.0%
GTCAAATGGTTAAATGTTGA+TGG + Chr6:88307660-88307679 MsG0680034480.01.T01:CDS 30.0%
GTTAAATCACAAGATGATAG+AGG + Chr6:88308441-88308460 MsG0680034480.01.T01:CDS 30.0%
GTTCTTGAAAACTCTACAAA+TGG + Chr6:88310013-88310032 MsG0680034480.01.T01:intron 30.0%
TATGAACATGTTTATGGTCA+AGG + Chr6:88308516-88308535 MsG0680034480.01.T01:CDS 30.0%
TCAGTTAGTTGTATAGGATT+AGG - Chr6:88304659-88304678 None:intergenic 30.0%
TGAAATTGTTGAAAGATGGA+AGG + Chr6:88310570-88310589 MsG0680034480.01.T01:CDS 30.0%
TTGTCTTGTATTACAATTGG+TGG + Chr6:88305388-88305407 MsG0680034480.01.T01:intron 30.0%
! ATAGTTTTTCGTCATGAATG+TGG - Chr6:88304895-88304914 None:intergenic 30.0%
! ATCAAAAAGTACAACGTTGT+TGG + Chr6:88304363-88304382 MsG0680034480.01.T01:intron 30.0%
! ATTACATCGAATGTTTTCTC+AGG - Chr6:88309123-88309142 None:intergenic 30.0%
! CAATTATGAGCCTTTTCTTT+TGG - Chr6:88306636-88306655 None:intergenic 30.0%
! CCGTTTTCAAATATCTGTAT+AGG + Chr6:88310393-88310412 MsG0680034480.01.T01:intron 30.0%
! CTCTAAATAGCACTTTTAGT+CGG + Chr6:88308687-88308706 MsG0680034480.01.T01:intron 30.0%
! CTTTTCTTTTGGTAAAGAGA+CGG - Chr6:88306625-88306644 None:intergenic 30.0%
! GTTATGCTTCCTCTTTTATA+TGG + Chr6:88310759-88310778 MsG0680034480.01.T01:three_prime_UTR 30.0%
! TACATTTTACTAATTTGGGG+TGG + Chr6:88306241-88306260 MsG0680034480.01.T01:intron 30.0%
! TATTTAGGGTGTGTTTGATA+CGG + Chr6:88305291-88305310 MsG0680034480.01.T01:intron 30.0%
! TGACATGAAAGCATATTATC+AGG + Chr6:88309404-88309423 MsG0680034480.01.T01:CDS 30.0%
! TTTCATTGATGATTTCTCTG+AGG + Chr6:88310067-88310086 MsG0680034480.01.T01:CDS 30.0%
! TTTGGTTTCTATTGAAAGAC+TGG + Chr6:88305920-88305939 MsG0680034480.01.T01:intron 30.0%
!! ATGAAGTATTGAATCAGATG+CGG - Chr6:88307128-88307147 None:intergenic 30.0%
!! TCATCGACTTAATTTAGACT+CGG + Chr6:88307848-88307867 MsG0680034480.01.T01:intron 30.0%
!!! AGCTTTTTAGTTTCATGTAG+TGG - Chr6:88306339-88306358 None:intergenic 30.0%
!!! CACTTTTTAGAGTGAATAAG+TGG + Chr6:88306432-88306451 MsG0680034480.01.T01:intron 30.0%
!!! CTTTTTAGTTTCATGTAGTG+GGG - Chr6:88306337-88306356 None:intergenic 30.0%
!!! GCTTTTTAGTTTCATGTAGT+GGG - Chr6:88306338-88306357 None:intergenic 30.0%
!!! TTTCTCAGGATACGTTTTTT+TGG - Chr6:88309109-88309128 None:intergenic 30.0%
AAACCAACACCGAAACAAAA+CGG - Chr6:88305903-88305922 None:intergenic 35.0%
AAAGCTTATGCATGGCAATT+TGG - Chr6:88308114-88308133 None:intergenic 35.0%
AACTTTGATTCTACTAGGGT+TGG + Chr6:88305573-88305592 MsG0680034480.01.T01:intron 35.0%
AAGATGATAGAGGGTTTCAA+AGG + Chr6:88308451-88308470 MsG0680034480.01.T01:CDS 35.0%
AATCAACCTTCTTGTTCTCA+AGG - Chr6:88310049-88310068 None:intergenic 35.0%
ACAAATACACACACAGACAT+CGG + Chr6:88309558-88309577 MsG0680034480.01.T01:intron 35.0%
ACTAGCCATATATGAGAGAA+TGG - Chr6:88304272-88304291 None:intergenic 35.0%
AGAAACAACAAGGGAAATTG+TGG + Chr6:88308891-88308910 MsG0680034480.01.T01:intron 35.0%
AGAGATAAAGGGTTGTATTG+TGG + Chr6:88305443-88305462 MsG0680034480.01.T01:intron 35.0%
AGTGGGGACATTATTAAAGT+GGG - Chr6:88306321-88306340 None:intergenic 35.0%
AGTTTGGAAGCAATGAAACA+AGG + Chr6:88304289-88304308 MsG0680034480.01.T01:CDS 35.0%
ATCAACCTTCTTGTTCTCAA+GGG - Chr6:88310048-88310067 None:intergenic 35.0%
ATCTATCGATCGTTAATCGA+TGG - Chr6:88308592-88308611 None:intergenic 35.0%
ATTCTTGAGCAGAAACAACA+AGG + Chr6:88308881-88308900 MsG0680034480.01.T01:intron 35.0%
CAAACACAAACTATGAAGCA+CGG - Chr6:88309738-88309757 None:intergenic 35.0%
CATGTATCTTTCAGATGAAG+AGG + Chr6:88307361-88307380 MsG0680034480.01.T01:CDS 35.0%
CCAAAGAGGATGAGAAATAA+TGG - Chr6:88306212-88306231 None:intergenic 35.0%
CCATAGTGAACCATCAATAA+CGG - Chr6:88308657-88308676 None:intergenic 35.0%
CCTTCAGAAATATGCAAGTT+TGG - Chr6:88307308-88307327 None:intergenic 35.0%
CGTCTCTTTACCAAAAGAAA+AGG + Chr6:88306623-88306642 MsG0680034480.01.T01:intron 35.0%
CTTCTCCATTCTCTCATATA+TGG + Chr6:88304264-88304283 MsG0680034480.01.T01:exon 35.0%
GAAGAGAAAGAAGATGCATT+AGG - Chr6:88305759-88305778 None:intergenic 35.0%
GAGAAATCATGTTTATGGAG+AGG - Chr6:88309026-88309045 None:intergenic 35.0%
GCGTAACTTTGATTCTACTA+GGG + Chr6:88305569-88305588 MsG0680034480.01.T01:intron 35.0%
GCTAAAATGAAACAATGCGA+CGG - Chr6:88310374-88310393 None:intergenic 35.0%
GTGTTTGATACGGTAAGTAT+TGG + Chr6:88305301-88305320 MsG0680034480.01.T01:intron 35.0%
TAATCGATGGTTTATCGATG+AGG - Chr6:88308579-88308598 None:intergenic 35.0%
TAGTGGGGACATTATTAAAG+TGG - Chr6:88306322-88306341 None:intergenic 35.0%
TATCTTTCTCCATCATCCAT+CGG + Chr6:88305695-88305714 MsG0680034480.01.T01:intron 35.0%
TCTCTATTACCAGCATATGA+AGG + Chr6:88306818-88306837 MsG0680034480.01.T01:CDS 35.0%
TCTTTGTCATGCAGATTTGT+TGG + Chr6:88308406-88308425 MsG0680034480.01.T01:intron 35.0%
TGCGTAACTTTGATTCTACT+AGG + Chr6:88305568-88305587 MsG0680034480.01.T01:intron 35.0%
TGCTGTTGATCAAACCAATT+TGG + Chr6:88309906-88309925 MsG0680034480.01.T01:CDS 35.0%
TGGAAGATTTACAGCTGAAT+TGG + Chr6:88306871-88306890 MsG0680034480.01.T01:CDS 35.0%
TGTCAGTGTGATTTCAAAGT+TGG - Chr6:88307028-88307047 None:intergenic 35.0%
TTCTCTTTGAATCTCCAGAT+TGG - Chr6:88307716-88307735 None:intergenic 35.0%
TTCTTGAGCAGAAACAACAA+GGG + Chr6:88308882-88308901 MsG0680034480.01.T01:intron 35.0%
! AAAAGTACAACGTTGTTGGT+TGG + Chr6:88304367-88304386 MsG0680034480.01.T01:intron 35.0%
! AAAGTACTAGATGTTGGTTG+TGG + Chr6:88308940-88308959 MsG0680034480.01.T01:CDS 35.0%
! ACTGACTATTGCAAAAGTGT+TGG + Chr6:88309327-88309346 MsG0680034480.01.T01:CDS 35.0%
! AGATGCATTAGGGTGATTTT+AGG - Chr6:88305748-88305767 None:intergenic 35.0%
! CATTGAGAGTGCAATAAAGA+AGG + Chr6:88306928-88306947 MsG0680034480.01.T01:CDS 35.0%
! CCAAACTTGCATATTTCTGA+AGG + Chr6:88307305-88307324 MsG0680034480.01.T01:CDS 35.0%
! CCATTATTTCTCATCCTCTT+TGG + Chr6:88306209-88306228 MsG0680034480.01.T01:intron 35.0%
! CTATGAAGGCATAGAATATC+CGG + Chr6:88307400-88307419 MsG0680034480.01.T01:intron 35.0%
! CTTGCATATTTCTGAAGGAT+CGG + Chr6:88307310-88307329 MsG0680034480.01.T01:CDS 35.0%
! GGAACCAAGATTTTACACTA+AGG + Chr6:88307758-88307777 MsG0680034480.01.T01:CDS 35.0%
! GTAATTAAAAGTGTACCTCC+AGG - Chr6:88309309-88309328 None:intergenic 35.0%
! TAGTCAGCGTGAATGTATTT+TGG + Chr6:88306763-88306782 MsG0680034480.01.T01:intron 35.0%
! TCTCTCATATATGGCTAGTT+TGG + Chr6:88304273-88304292 MsG0680034480.01.T01:exon 35.0%
! TTTTATAAGTGGTTGAAGCC+TGG + Chr6:88309288-88309307 MsG0680034480.01.T01:CDS 35.0%
! TTTTGGTAAAGAGACGGTTA+TGG - Chr6:88306619-88306638 None:intergenic 35.0%
!! ACATCTAGTACTTTTTGACC+TGG - Chr6:88308934-88308953 None:intergenic 35.0%
!! ACTGATTTTCCTTCATATGC+TGG - Chr6:88306830-88306849 None:intergenic 35.0%
!! GGCTGAAAATTTTGATGTTG+AGG + Chr6:88308987-88309006 MsG0680034480.01.T01:CDS 35.0%
!! GGTCAAAAAGTACTAGATGT+TGG + Chr6:88308934-88308953 MsG0680034480.01.T01:CDS 35.0%
!! TATCTTCCCCTTTTTCATGT+AGG + Chr6:88308175-88308194 MsG0680034480.01.T01:intron 35.0%
!! TCATGCAGATTTGTTGGATA+TGG + Chr6:88308412-88308431 MsG0680034480.01.T01:intron 35.0%
!!! GGAAAATCAGTTTTAGAGCT+TGG + Chr6:88306839-88306858 MsG0680034480.01.T01:CDS 35.0%
AAATGCCCTTGAGAACAAGA+AGG + Chr6:88310040-88310059 MsG0680034480.01.T01:CDS 40.0%
AATTGGAAGCCCATTTAGAC+TGG - Chr6:88305227-88305246 None:intergenic 40.0%
AGGCATAGAATATCCGGATT+TGG + Chr6:88307406-88307425 MsG0680034480.01.T01:intron 40.0%
AGGGAAATTGTGGCAAAGTT+AGG + Chr6:88308901-88308920 MsG0680034480.01.T01:CDS 40.0%
GAGTGTGTGACAAACCAAAT+TGG - Chr6:88309923-88309942 None:intergenic 40.0%
GATTCAATGTGCTCACTATG+TGG + Chr6:88307506-88307525 MsG0680034480.01.T01:intron 40.0%
GGTGAGCTTCTTATATGCTT+TGG + Chr6:88310088-88310107 MsG0680034480.01.T01:intron 40.0%
GTGAAGTGCAAAGAAGTTAC+TGG + Chr6:88304526-88304545 MsG0680034480.01.T01:CDS 40.0%
GTGGGGACATTATTAAAGTG+GGG - Chr6:88306320-88306339 None:intergenic 40.0%
TACTGAGTATTTGAGTCCGA+TGG - Chr6:88309064-88309083 None:intergenic 40.0%
TAGCTGAAAGGATGGTCAAA+TGG + Chr6:88307646-88307665 MsG0680034480.01.T01:CDS 40.0%
TATCCAACGACCGTTATTGA+TGG + Chr6:88308644-88308663 MsG0680034480.01.T01:intron 40.0%
TCACCTCAATCATAATCGTC+CGG - Chr6:88308010-88308029 None:intergenic 40.0%
TCCTTTGAGCTTTCTCTTGT+GGG + Chr6:88308236-88308255 MsG0680034480.01.T01:CDS 40.0%
TCTCTCTTCTTTGTCGAGAT+GGG - Chr6:88304607-88304626 None:intergenic 40.0%
TCTTTGAATCTCCAGATTGG+TGG - Chr6:88307713-88307732 None:intergenic 40.0%
! CCGTTATTGATGGTTCACTA+TGG + Chr6:88308654-88308673 MsG0680034480.01.T01:intron 40.0%
! CTAGATGTTGGTTGTGGTAT+TGG + Chr6:88308946-88308965 MsG0680034480.01.T01:CDS 40.0%
! GAATCTTGTTTCCACCAATC+TGG + Chr6:88307699-88307718 MsG0680034480.01.T01:CDS 40.0%
!!! GTTTTGTTTCGGTGTTGGTT+TGG + Chr6:88305902-88305921 MsG0680034480.01.T01:intron 40.0%
!!! TTACCGTTTTGTTTCGGTGT+TGG + Chr6:88305897-88305916 MsG0680034480.01.T01:intron 40.0%
ACTGAGACATGCCTAATTCG+AGG + Chr6:88309707-88309726 MsG0680034480.01.T01:intron 45.0%
AGAGACGGTTATGGACTTTG+AGG - Chr6:88306610-88306629 None:intergenic 45.0%
ATGTAGATCTGTCGCCAAAG+AGG - Chr6:88306226-88306245 None:intergenic 45.0%
CTCCTTTGAGCTTTCTCTTG+TGG + Chr6:88308235-88308254 MsG0680034480.01.T01:CDS 45.0%
CTTGGTTCCCTATAGTGAGT+TGG - Chr6:88307747-88307766 None:intergenic 45.0%
CTTGTGGGATGCAAATGCAT+TGG + Chr6:88308251-88308270 MsG0680034480.01.T01:CDS 45.0%
GAACCATCAATAACGGTCGT+TGG - Chr6:88308650-88308669 None:intergenic 45.0%
GCAAAGTTAGGACTAAAGCC+AGG + Chr6:88308913-88308932 MsG0680034480.01.T01:CDS 45.0%
GTCTCTCTTCTTTGTCGAGA+TGG - Chr6:88304608-88304627 None:intergenic 45.0%
TACATGTGTCAGTGTCGTGT+CGG + Chr6:88309648-88309667 MsG0680034480.01.T01:intron 45.0%
TATAAGTGGTTGAAGCCTGG+AGG + Chr6:88309291-88309310 MsG0680034480.01.T01:CDS 45.0%
TCACAGATGCTTGAGAATGC+TGG + Chr6:88309868-88309887 MsG0680034480.01.T01:intron 45.0%
TCCCACAAGAGAAAGCTCAA+AGG - Chr6:88308240-88308259 None:intergenic 45.0%
TGAAGTCCACAGCAAGCAAT+TGG - Chr6:88306910-88306929 None:intergenic 45.0%
TGACCGGACGATTATGATTG+AGG + Chr6:88308004-88308023 MsG0680034480.01.T01:intron 45.0%
TGAGGTGACGATCATGTCAA+CGG + Chr6:88308022-88308041 MsG0680034480.01.T01:intron 45.0%
TGTAGCTGGTGAGCAGATAT+GGG + Chr6:88310609-88310628 MsG0680034480.01.T01:CDS 45.0%
TTAGAGCTTGGAGCAGGTAT+TGG + Chr6:88306851-88306870 MsG0680034480.01.T01:CDS 45.0%
! GATGTTGGTTGTGGTATTGG+AGG + Chr6:88308949-88308968 MsG0680034480.01.T01:CDS 45.0%
! TGGAGGTGGTGACTTTTACA+TGG + Chr6:88308966-88308985 MsG0680034480.01.T01:CDS 45.0%
!!! TCAGTTTTAGAGCTTGGAGC+AGG + Chr6:88306845-88306864 MsG0680034480.01.T01:CDS 45.0%
!!! AAAAAAAGTATATTTTTTAA+AGG - Chr6:88304749-88304768 None:intergenic 5.0%
!!! TATAATTTTATATTTGAAAT+CGG + Chr6:88307448-88307467 MsG0680034480.01.T01:intron 5.0%
CATCATCCATCGGTGAAGGA+TGG + Chr6:88305705-88305724 MsG0680034480.01.T01:intron 50.0%
CATCCTTCACCGATGGATGA+TGG - Chr6:88305707-88305726 None:intergenic 50.0%
CCAAAACCATCCTTCACCGA+TGG - Chr6:88305714-88305733 None:intergenic 50.0%
CTAGCTATCGAACGTGCCAT+CGG + Chr6:88309045-88309064 MsG0680034480.01.T01:CDS 50.0%
CTCTTCTTTGTCGAGATGGG+AGG - Chr6:88304604-88304623 None:intergenic 50.0%
GAGGTGACGATCATGTCAAC+GGG + Chr6:88308023-88308042 MsG0680034480.01.T01:intron 50.0%
GCACGGACATTCCTCGAATT+AGG - Chr6:88309721-88309740 None:intergenic 50.0%
GTAGCTGGTGAGCAGATATG+GGG + Chr6:88310610-88310629 MsG0680034480.01.T01:CDS 50.0%
GTGTAGCTGGTGAGCAGATA+TGG + Chr6:88310608-88310627 MsG0680034480.01.T01:CDS 50.0%
TCTCCATCATCCATCGGTGA+AGG + Chr6:88305701-88305720 MsG0680034480.01.T01:intron 50.0%
TGGAAGGCTAAGCAGATGAG+AGG + Chr6:88310586-88310605 MsG0680034480.01.T01:CDS 50.0%
TTTGTGAGCACAGGAGGACT+TGG + Chr6:88308540-88308559 MsG0680034480.01.T01:CDS 50.0%
! AAGCAGATGAGAGGTGTAGC+TGG + Chr6:88310595-88310614 MsG0680034480.01.T01:CDS 50.0%
! CCATCGGTGAAGGATGGTTT+TGG + Chr6:88305711-88305730 MsG0680034480.01.T01:intron 50.0%
! GCTGAATTGGCTCAGAAAGC+TGG + Chr6:88306884-88306903 MsG0680034480.01.T01:CDS 50.0%
! GTTGGTTGTGGTATTGGAGG+TGG + Chr6:88308952-88308971 MsG0680034480.01.T01:CDS 50.0%
! AGCTGGCCAATTGCTTGCTG+TGG + Chr6:88306901-88306920 MsG0680034480.01.T01:CDS 55.0%
! CAAGGCTTTGTGAGCACAGG+AGG + Chr6:88308534-88308553 MsG0680034480.01.T01:CDS 55.0%
! GGTCAAGGCTTTGTGAGCAC+AGG + Chr6:88308531-88308550 MsG0680034480.01.T01:CDS 55.0%
!! TGTCGTGTCGGTGTCGTTGT+CGG + Chr6:88309660-88309679 MsG0680034480.01.T01:intron 55.0%
!! GTCGGTGTCGTTGTCGGTGT+CGG + Chr6:88309666-88309685 MsG0680034480.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 88304213 88310861 88304213 ID=MsG0680034480.01;Name=MsG0680034480.01
Chr6 mRNA 88304213 88310861 88304213 ID=MsG0680034480.01.T01;Parent=MsG0680034480.01;Name=MsG0680034480.01.T01;_AED=0.37;_eAED=0.37;_QI=70|1|1|1|0.90|0.91|12|204|497
Chr6 exon 88304213 88304310 88304213 ID=MsG0680034480.01.T01:exon:18387;Parent=MsG0680034480.01.T01
Chr6 exon 88304511 88304632 88304511 ID=MsG0680034480.01.T01:exon:18388;Parent=MsG0680034480.01.T01
Chr6 exon 88306812 88306949 88306812 ID=MsG0680034480.01.T01:exon:18389;Parent=MsG0680034480.01.T01
Chr6 exon 88307245 88307382 88307245 ID=MsG0680034480.01.T01:exon:18390;Parent=MsG0680034480.01.T01
Chr6 exon 88307636 88307779 88307636 ID=MsG0680034480.01.T01:exon:18391;Parent=MsG0680034480.01.T01
Chr6 exon 88308197 88308307 88308197 ID=MsG0680034480.01.T01:exon:18392;Parent=MsG0680034480.01.T01
Chr6 exon 88308420 88308561 88308420 ID=MsG0680034480.01.T01:exon:18393;Parent=MsG0680034480.01.T01
Chr6 exon 88308893 88309173 88308893 ID=MsG0680034480.01.T01:exon:18394;Parent=MsG0680034480.01.T01
Chr6 exon 88309264 88309425 88309264 ID=MsG0680034480.01.T01:exon:18395;Parent=MsG0680034480.01.T01
Chr6 exon 88309874 88309927 88309874 ID=MsG0680034480.01.T01:exon:18396;Parent=MsG0680034480.01.T01
Chr6 exon 88310014 88310088 88310014 ID=MsG0680034480.01.T01:exon:18397;Parent=MsG0680034480.01.T01
Chr6 exon 88310559 88310861 88310559 ID=MsG0680034480.01.T01:exon:18398;Parent=MsG0680034480.01.T01
Chr6 five_prime_UTR 88304213 88304282 88304213 ID=MsG0680034480.01.T01:five_prime_utr;Parent=MsG0680034480.01.T01
Chr6 CDS 88304283 88304310 88304283 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88304511 88304632 88304511 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88306812 88306949 88306812 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88307245 88307382 88307245 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88307636 88307779 88307636 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88308197 88308307 88308197 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88308420 88308561 88308420 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88308893 88309173 88308893 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88309264 88309425 88309264 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88309874 88309927 88309874 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88310014 88310088 88310014 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 CDS 88310559 88310657 88310559 ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01
Chr6 three_prime_UTR 88310658 88310861 88310658 ID=MsG0680034480.01.T01:three_prime_utr;Parent=MsG0680034480.01.T01
Gene Sequence

>MsG0680034480.01.T01

ATGGCTAGTTTGGAAGCAATGAAACAAGGTGGTGAAGATGAACGTGAAGTGCAAAGAAGTTACTGGAAAGAGCATTGTGTAAATTTGTCAGTTGAGTCAATGATGCTCGATTCAAACGCCTCCCATCTCGACAAAGAAGAGAGACCCGAAGTACTTTCTCTATTACCAGCATATGAAGGAAAATCAGTTTTAGAGCTTGGAGCAGGTATTGGAAGATTTACAGCTGAATTGGCTCAGAAAGCTGGCCAATTGCTTGCTGTGGACTTCATTGAGAGTGCAATAAAGAAGAATGAAAATAATAATGGACACCATAAGAATGTCAAGTTCATGTGTGCTGATGTCACATCTCCAAACTTGCATATTTCTGAAGGATCGGTTGATTTGATATTCTCAAATTGGTTACTCATGTATCTTTCAGATGAAGAGGTTAAAAATTTAGCTGAAAGGATGGTCAAATGGTTAAATGTTGATGGATGTATATTCTTTAGAGAATCTTGTTTCCACCAATCTGGAGATTCAAAGAGAAAATACAATCCAACTCACTATAGGGAACCAAGATTTTACACTAAGGTATTTAAAGAATGTCATATGAGTGATGATAATGGGAACTCCTTTGAGCTTTCTCTTGTGGGATGCAAATGCATTGGAGCTTATGTTAGAAATAAGAAGAATCAAAATCAGATTTGTTGGATATGGCAAAAAGTTAAATCACAAGATGATAGAGGGTTTCAAAGGTTCTTAGATAGTGTTGAGTATAACCACAAAGATATCTTACTCTATGAACATGTTTATGGTCAAGGCTTTGTGAGCACAGGAGGACTTGAAACAACAAGGGAAATTGTGGCAAAGTTAGGACTAAAGCCAGGTCAAAAAGTACTAGATGTTGGTTGTGGTATTGGAGGTGGTGACTTTTACATGGCTGAAAATTTTGATGTTGAGGTCGTTGCTATTGACCTCTCCATAAACATGATTTCTCTAGCTATCGAACGTGCCATCGGACTCAAATACTCAGTAGAATTCGAATGCGTTGATTGTACCAAAAAAACGTATCCTGAGAAAACATTCGATGTAATCTACACTCGCGACACCTTATTACACATCAAAGATAAACCAACATTGTTCAGATCATTTTATAAGTGGTTGAAGCCTGGAGGTACACTTTTAATTACTGACTATTGCAAAAGTGTTGGAAGTCTTTCAGTAGAATATGCAGAGTATATAAAAAAGAGAGGATATTATATCCATGACATGAAAGCATATTATCAGATGCTTGAGAATGCTGGATTTGATGATGTTATTGCTGTTGATCAAACCAATTTGTTCTTGAAAACTCTACAAATGGAGTTAAATGCCCTTGAGAACAAGAAGGTTGATTTCATTGATGATTTCTCTGAGGATGACTATAATGAAATTGTTGAAAGATGGAAGGCTAAGCAGATGAGAGGTGTAGCTGGTGAGCAGATATGGGGATTGTTCATTGCCAAGAAAAAATGA

Protein sequence

>MsG0680034480.01.T01

MASLEAMKQGGEDEREVQRSYWKEHCVNLSVESMMLDSNASHLDKEERPEVLSLLPAYEGKSVLELGAGIGRFTAELAQKAGQLLAVDFIESAIKKNENNNGHHKNVKFMCADVTSPNLHISEGSVDLIFSNWLLMYLSDEEVKNLAERMVKWLNVDGCIFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECHMSDDNGNSFELSLVGCKCIGAYVRNKKNQNQICWIWQKVKSQDDRGFQRFLDSVEYNHKDILLYEHVYGQGFVSTGGLETTREIVAKLGLKPGQKVLDVGCGIGGGDFYMAENFDVEVVAIDLSINMISLAIERAIGLKYSVEFECVDCTKKTYPEKTFDVIYTRDTLLHIKDKPTLFRSFYKWLKPGGTLLITDYCKSVGSLSVEYAEYIKKRGYYIHDMKAYYQMLENAGFDDVIAVDQTNLFLKTLQMELNALENKKVDFIDDFSEDDYNEIVERWKAKQMRGVAGEQIWGLFIAKKK*