Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034480.01.T01 | XP_003619836.1 | 97.787 | 497 | 11 | 0 | 1 | 497 | 1 | 497 | 0 | 1016 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034480.01.T01 | Q9M571 | 73.022 | 493 | 133 | 0 | 4 | 496 | 1 | 493 | 0 | 764 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034480.01.T01 | G7KPT7 | 97.787 | 497 | 11 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1016 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048660.01 | MsG0680034480.01 | 0.800256 | 1.569793e-48 | 7.275710e-46 |
MsG0080049002.01 | MsG0680034480.01 | 0.800284 | 1.549060e-48 | 7.184917e-46 |
MsG0180000129.01 | MsG0680034480.01 | 0.807164 | 5.777612e-50 | 3.195166e-47 |
MsG0180000241.01 | MsG0680034480.01 | 0.801394 | 9.192877e-49 | 4.385230e-46 |
MsG0180000646.01 | MsG0680034480.01 | 0.820951 | 5.229027e-53 | 4.197266e-50 |
MsG0180000647.01 | MsG0680034480.01 | 0.821812 | 3.309507e-53 | 2.721121e-50 |
MsG0180001119.01 | MsG0680034480.01 | 0.805662 | 1.197773e-49 | 6.373578e-47 |
MsG0180001591.01 | MsG0680034480.01 | 0.832949 | 7.058411e-56 | 8.010440e-53 |
MsG0180003730.01 | MsG0680034480.01 | 0.800445 | 1.436207e-48 | 6.688635e-46 |
MsG0180004017.01 | MsG0680034480.01 | 0.840014 | 1.122248e-57 | 1.577877e-54 |
MsG0180004106.01 | MsG0680034480.01 | 0.840678 | 7.524618e-58 | 1.079843e-54 |
MsG0180004164.01 | MsG0680034480.01 | 0.826483 | 2.646234e-54 | 2.484758e-51 |
MsG0180004277.01 | MsG0680034480.01 | 0.877121 | 8.100583e-69 | 4.026909e-65 |
MsG0180004518.01 | MsG0680034480.01 | 0.822650 | 2.114861e-53 | 1.780920e-50 |
MsG0180004988.01 | MsG0680034480.01 | 0.846012 | 2.837677e-59 | 4.817648e-56 |
MsG0180005639.01 | MsG0680034480.01 | 0.804720 | 1.886940e-49 | 9.800579e-47 |
MsG0180006035.01 | MsG0680034480.01 | 0.828495 | 8.709971e-55 | 8.672091e-52 |
MsG0180006168.01 | MsG0680034480.01 | 0.867132 | 1.714428e-65 | 5.919957e-62 |
MsG0280010611.01 | MsG0680034480.01 | 0.833502 | 5.139591e-56 | 5.930054e-53 |
MsG0280010645.01 | MsG0680034480.01 | 0.832424 | 9.528860e-56 | 1.064598e-52 |
MsG0280010675.01 | MsG0680034480.01 | 0.877772 | 4.804428e-69 | 2.445919e-65 |
MsG0280011272.01 | MsG0680034480.01 | -0.826872 | 2.137570e-54 | 2.029679e-51 |
MsG0280011443.01 | MsG0680034480.01 | 0.825627 | 4.229350e-54 | 3.875791e-51 |
MsG0380012011.01 | MsG0680034480.01 | 0.800222 | 1.594512e-48 | 7.383881e-46 |
MsG0380012356.01 | MsG0680034480.01 | 0.806443 | 8.204620e-50 | 4.453900e-47 |
MsG0380012438.01 | MsG0680034480.01 | 0.804052 | 2.599571e-49 | 1.327150e-46 |
MsG0380012567.01 | MsG0680034480.01 | 0.805561 | 1.257826e-49 | 6.675445e-47 |
MsG0380012821.01 | MsG0680034480.01 | 0.804478 | 2.118696e-49 | 1.093524e-46 |
MsG0380012844.01 | MsG0680034480.01 | 0.811560 | 6.586900e-51 | 4.090469e-48 |
MsG0380013373.01 | MsG0680034480.01 | 0.803584 | 3.251097e-49 | 1.640002e-46 |
MsG0380013499.01 | MsG0680034480.01 | 0.821853 | 3.236572e-53 | 2.664331e-50 |
MsG0380013687.01 | MsG0680034480.01 | 0.800939 | 1.138789e-48 | 5.370599e-46 |
MsG0380014386.01 | MsG0680034480.01 | 0.858697 | 6.894138e-63 | 1.774929e-59 |
MsG0380014464.01 | MsG0680034480.01 | 0.800159 | 1.642249e-48 | 7.592508e-46 |
MsG0380014510.01 | MsG0680034480.01 | 0.819427 | 1.168369e-52 | 8.988114e-50 |
MsG0380014552.01 | MsG0680034480.01 | 0.821038 | 4.992061e-53 | 4.016850e-50 |
MsG0380014794.01 | MsG0680034480.01 | 0.868888 | 4.671276e-66 | 1.717824e-62 |
MsG0380014909.01 | MsG0680034480.01 | 0.808276 | 3.353454e-50 | 1.909384e-47 |
MsG0680030767.01 | MsG0680034480.01 | 0.844109 | 9.267381e-59 | 1.480899e-55 |
MsG0680031146.01 | MsG0680034480.01 | 0.829050 | 6.394814e-55 | 6.470014e-52 |
MsG0680031996.01 | MsG0680034480.01 | 0.818889 | 1.548959e-52 | 1.174040e-49 |
MsG0680031998.01 | MsG0680034480.01 | 0.824918 | 6.219882e-54 | 5.586481e-51 |
MsG0680032673.01 | MsG0680034480.01 | 0.803775 | 2.967236e-49 | 1.504068e-46 |
MsG0680034480.01 | MsG0680034601.01 | 0.961291 | 1.563873e-119 | 7.178689e-114 |
MsG0680034480.01 | MsG0780036509.01 | 0.860065 | 2.677791e-63 | 7.227680e-60 |
MsG0680034480.01 | MsG0780036517.01 | 0.804454 | 2.143895e-49 | 1.105822e-46 |
MsG0680034480.01 | MsG0780036595.01 | 0.802482 | 5.493225e-49 | 2.693863e-46 |
MsG0680034480.01 | MsG0780036596.01 | 0.824891 | 6.312813e-54 | 5.665562e-51 |
MsG0680034480.01 | MsG0780036620.01 | 0.821311 | 4.320256e-53 | 3.502296e-50 |
MsG0680034480.01 | MsG0780036623.01 | 0.820101 | 8.192857e-53 | 6.423221e-50 |
MsG0680034480.01 | MsG0780036881.01 | 0.818882 | 1.554001e-52 | 1.177638e-49 |
MsG0680034480.01 | MsG0780037351.01 | 0.859606 | 3.681387e-63 | 9.778191e-60 |
MsG0680034480.01 | MsG0780037808.01 | 0.839089 | 1.951504e-57 | 2.666261e-54 |
MsG0680034480.01 | MsG0780039186.01 | 0.833864 | 4.173363e-56 | 4.868324e-53 |
MsG0680034480.01 | MsG0780039339.01 | 0.831743 | 1.403871e-55 | 1.537469e-52 |
MsG0680034480.01 | MsG0780040700.01 | 0.805009 | 1.641443e-49 | 8.588840e-47 |
MsG0680034480.01 | MsG0780041074.01 | 0.837207 | 5.957597e-57 | 7.683609e-54 |
MsG0680034480.01 | MsG0780041262.01 | 0.840243 | 9.776488e-58 | 1.384239e-54 |
MsG0680034480.01 | MsG0780041468.01 | 0.835487 | 1.631151e-56 | 1.997603e-53 |
MsG0680034480.01 | MsG0880041991.01 | 0.834537 | 2.829977e-56 | 3.368614e-53 |
MsG0680034480.01 | MsG0880042086.01 | 0.816099 | 6.584681e-52 | 4.622968e-49 |
MsG0680034480.01 | MsG0880043249.01 | 0.828941 | 6.794103e-55 | 6.852226e-52 |
MsG0680034480.01 | MsG0880044043.01 | 0.834899 | 2.294610e-56 | 2.760851e-53 |
MsG0680034480.01 | MsG0880044487.01 | 0.818457 | 1.941075e-52 | 1.453843e-49 |
MsG0680034480.01 | MsG0880044619.01 | 0.802521 | 5.394650e-49 | 2.647999e-46 |
MsG0680034480.01 | MsG0880044620.01 | 0.801182 | 1.015748e-48 | 4.819705e-46 |
MsG0680034480.01 | MsG0880044625.01 | 0.803224 | 3.861291e-49 | 1.929706e-46 |
MsG0680034480.01 | MsG0880044629.01 | 0.805789 | 1.126478e-49 | 6.013930e-47 |
MsG0680034480.01 | MsG0880045402.01 | 0.830853 | 2.324249e-55 | 2.478850e-52 |
MsG0680034480.01 | MsG0880045617.01 | 0.808181 | 3.513025e-50 | 1.995239e-47 |
MsG0680034480.01 | MsG0880045624.01 | 0.858077 | 1.054799e-62 | 2.659816e-59 |
MsG0680034480.01 | MsG0880045668.01 | 0.828641 | 8.028948e-55 | 8.027773e-52 |
MsG0680034480.01 | MsG0880045722.01 | 0.808981 | 2.371004e-50 | 1.375159e-47 |
MsG0680034480.01 | MsG0880045927.01 | 0.818128 | 2.303835e-52 | 1.709816e-49 |
MsG0680034480.01 | MsG0880046024.01 | 0.803378 | 3.587751e-49 | 1.800077e-46 |
MsG0680034480.01 | MsG0880046025.01 | 0.841663 | 4.145005e-58 | 6.133004e-55 |
MsG0680034480.01 | MsG0880046200.01 | 0.849459 | 3.189621e-60 | 6.050555e-57 |
MsG0680034480.01 | MsG0880046296.01 | 0.803663 | 3.130265e-49 | 1.582124e-46 |
MsG0680034480.01 | MsG0880046533.01 | 0.802310 | 5.962011e-49 | 2.911131e-46 |
MsG0680034480.01 | MsG0880047055.01 | -0.806636 | 7.472495e-50 | 4.076186e-47 |
MsG0680034480.01 | MsG0880047394.01 | 0.828310 | 9.652917e-55 | 9.558649e-52 |
MsG0680034480.01 | MsG0880047432.01 | 0.837758 | 4.303980e-57 | 5.646923e-54 |
MsG0680034480.01 | MsG0880047657.01 | 0.805342 | 1.397963e-49 | 7.377715e-47 |
MsG0680034480.01 | MsG0880047740.01 | 0.824143 | 9.468719e-54 | 8.316833e-51 |
MsG0680034480.01 | MsG0880047770.01 | 0.840595 | 7.908948e-58 | 1.132015e-54 |
MsG0480018666.01 | MsG0680034480.01 | 0.812363 | 4.401822e-51 | 2.793215e-48 |
MsG0480018910.01 | MsG0680034480.01 | 0.805545 | 1.267828e-49 | 6.725734e-47 |
MsG0480019065.01 | MsG0680034480.01 | 0.824911 | 6.246113e-54 | 5.608745e-51 |
MsG0480019197.01 | MsG0680034480.01 | 0.805972 | 1.031320e-49 | 5.531682e-47 |
MsG0480020229.01 | MsG0680034480.01 | 0.868675 | 5.473835e-66 | 1.997157e-62 |
MsG0480020363.01 | MsG0680034480.01 | 0.818455 | 1.942963e-52 | 1.455191e-49 |
MsG0480020433.01 | MsG0680034480.01 | 0.820164 | 7.927764e-53 | 6.225691e-50 |
MsG0480021060.01 | MsG0680034480.01 | 0.813537 | 2.434276e-51 | 1.594019e-48 |
MsG0480021101.01 | MsG0680034480.01 | 0.804477 | 2.119627e-49 | 1.093968e-46 |
MsG0480021111.01 | MsG0680034480.01 | 0.804697 | 1.907851e-49 | 9.902978e-47 |
MsG0480021597.01 | MsG0680034480.01 | 0.820921 | 5.311639e-53 | 4.259800e-50 |
MsG0480023150.01 | MsG0680034480.01 | 0.845951 | 2.947563e-59 | 4.994503e-56 |
MsG0480023190.01 | MsG0680034480.01 | 0.805596 | 1.236924e-49 | 6.570466e-47 |
MsG0480023498.01 | MsG0680034480.01 | 0.808615 | 2.838698e-50 | 1.630523e-47 |
MsG0480023890.01 | MsG0680034480.01 | 0.816586 | 5.122926e-52 | 3.644713e-49 |
MsG0580024340.01 | MsG0680034480.01 | 0.821830 | 3.277267e-53 | 2.695993e-50 |
MsG0580024759.01 | MsG0680034480.01 | 0.847721 | 9.667353e-60 | 1.733889e-56 |
MsG0580025226.01 | MsG0680034480.01 | 0.820159 | 7.949272e-53 | 6.241687e-50 |
MsG0580025407.01 | MsG0680034480.01 | -0.818691 | 1.717292e-52 | 1.294440e-49 |
MsG0580025610.01 | MsG0680034480.01 | 0.834156 | 3.527376e-56 | 4.150338e-53 |
MsG0580025625.01 | MsG0680034480.01 | 0.820740 | 5.845280e-53 | 4.663872e-50 |
MsG0380015131.01 | MsG0680034480.01 | 0.807839 | 4.155225e-50 | 2.338648e-47 |
MsG0380015896.01 | MsG0680034480.01 | 0.830132 | 3.488716e-55 | 3.643276e-52 |
MsG0380015921.01 | MsG0680034480.01 | 0.800290 | 1.544735e-48 | 7.165912e-46 |
MsG0380015943.01 | MsG0680034480.01 | 0.844688 | 6.476051e-59 | 1.053747e-55 |
MsG0380016188.01 | MsG0680034480.01 | -0.827316 | 1.673146e-54 | 1.609688e-51 |
MsG0380016764.01 | MsG0680034480.01 | 0.809895 | 1.509116e-50 | 8.968081e-48 |
MsG0580026156.01 | MsG0680034480.01 | 0.800629 | 1.317484e-48 | 6.164481e-46 |
MsG0580027348.01 | MsG0680034480.01 | 0.810017 | 1.420576e-50 | 8.469595e-48 |
MsG0580027394.01 | MsG0680034480.01 | 0.806713 | 7.197236e-50 | 3.934005e-47 |
MsG0580028428.01 | MsG0680034480.01 | 0.814270 | 1.678265e-51 | 1.120996e-48 |
MsG0580028444.01 | MsG0680034480.01 | 0.807570 | 4.738153e-50 | 2.648047e-47 |
MsG0580028456.01 | MsG0680034480.01 | 0.833454 | 5.283759e-56 | 6.087943e-53 |
MsG0580028719.01 | MsG0680034480.01 | 0.828527 | 8.554599e-55 | 8.525161e-52 |
MsG0580029394.01 | MsG0680034480.01 | 0.808354 | 3.227473e-50 | 1.841446e-47 |
MsG0580029396.01 | MsG0680034480.01 | 0.815560 | 8.685102e-52 | 6.007985e-49 |
MsG0580029433.01 | MsG0680034480.01 | 0.816482 | 5.407117e-52 | 3.835814e-49 |
MsG0580029529.01 | MsG0680034480.01 | 0.804678 | 1.925160e-49 | 9.987850e-47 |
MsG0680030680.01 | MsG0680034480.01 | 0.815393 | 9.460228e-52 | 6.514296e-49 |
MsG0280006587.01 | MsG0680034480.01 | 0.833341 | 5.638102e-56 | 6.474873e-53 |
MsG0280006706.01 | MsG0680034480.01 | 0.812847 | 3.450959e-51 | 2.217770e-48 |
MsG0280006718.01 | MsG0680034480.01 | 0.804539 | 2.058252e-49 | 1.063971e-46 |
MsG0280007754.01 | MsG0680034480.01 | 0.851562 | 8.183955e-61 | 1.663083e-57 |
MsG0280007755.01 | MsG0680034480.01 | 0.822732 | 2.023295e-53 | 1.707830e-50 |
MsG0280008165.01 | MsG0680034480.01 | 0.827447 | 1.556844e-54 | 1.503440e-51 |
MsG0280008171.01 | MsG0680034480.01 | 0.835971 | 1.229794e-56 | 1.528091e-53 |
MsG0280008383.01 | MsG0680034480.01 | 0.821997 | 2.997378e-53 | 2.477441e-50 |
MsG0280008709.01 | MsG0680034480.01 | 0.805499 | 1.295929e-49 | 6.866851e-47 |
MsG0280009169.01 | MsG0680034480.01 | 0.835579 | 1.545496e-56 | 1.897857e-53 |
MsG0280009756.01 | MsG0680034480.01 | 0.829289 | 5.594320e-55 | 5.701856e-52 |
MsG0280009953.01 | MsG0680034480.01 | 0.837482 | 5.063598e-57 | 6.586811e-54 |
MsG0280009954.01 | MsG0680034480.01 | 0.811374 | 7.227697e-51 | 4.466500e-48 |
MsG0280009960.01 | MsG0680034480.01 | 0.804704 | 1.901314e-49 | 9.870836e-47 |
MsG0280010236.01 | MsG0680034480.01 | 0.861197 | 1.214928e-63 | 3.409162e-60 |
MsG0280010257.01 | MsG0680034480.01 | 0.821183 | 4.622598e-53 | 3.734347e-50 |
MsG0280010544.01 | MsG0680034480.01 | 0.801413 | 9.112141e-49 | 4.348798e-46 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0680034480.01 | MsG0680034601.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034480.01.T01 | MTR_6g069600 | 97.787 | 497 | 11 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1016 |
MsG0680034480.01.T01 | MTR_8g107370 | 80.040 | 496 | 96 | 2 | 1 | 496 | 1 | 493 | 0.0 | 803 |
MsG0680034480.01.T01 | MTR_8g107370 | 81.198 | 484 | 90 | 1 | 13 | 496 | 5 | 487 | 0.0 | 801 |
MsG0680034480.01.T01 | MTR_8g107370 | 79.957 | 464 | 90 | 2 | 1 | 464 | 1 | 461 | 0.0 | 749 |
MsG0680034480.01.T01 | MTR_8g107370 | 80.866 | 439 | 81 | 2 | 1 | 439 | 1 | 436 | 0.0 | 718 |
MsG0680034480.01.T01 | MTR_1g014690 | 33.019 | 106 | 69 | 1 | 290 | 393 | 75 | 180 | 8.92e-13 | 69.3 |
MsG0680034480.01.T01 | MTR_1g014690 | 33.019 | 106 | 69 | 1 | 290 | 393 | 130 | 235 | 1.12e-12 | 69.7 |
MsG0680034480.01.T01 | MTR_3g032530 | 31.034 | 116 | 78 | 1 | 280 | 393 | 86 | 201 | 8.32e-12 | 67.0 |
MsG0680034480.01.T01 | MTR_3g032530 | 31.034 | 116 | 78 | 1 | 280 | 393 | 43 | 158 | 9.29e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034480.01.T01 | AT1G73600 | 71.901 | 484 | 136 | 0 | 13 | 496 | 6 | 489 | 0.0 | 752 |
MsG0680034480.01.T01 | AT1G73600 | 71.901 | 484 | 136 | 0 | 13 | 496 | 20 | 503 | 0.0 | 751 |
MsG0680034480.01.T01 | AT1G48600 | 72.016 | 486 | 136 | 0 | 12 | 497 | 6 | 491 | 0.0 | 745 |
MsG0680034480.01.T01 | AT3G18000 | 71.020 | 490 | 142 | 0 | 7 | 496 | 1 | 490 | 0.0 | 744 |
MsG0680034480.01.T01 | AT1G48600 | 72.574 | 474 | 130 | 0 | 24 | 497 | 2 | 475 | 0.0 | 728 |
MsG0680034480.01.T01 | AT5G13710 | 29.697 | 165 | 103 | 4 | 259 | 411 | 55 | 218 | 2.67e-13 | 71.6 |
MsG0680034480.01.T01 | AT5G13710 | 29.697 | 165 | 103 | 4 | 259 | 411 | 55 | 218 | 2.67e-13 | 71.6 |
MsG0680034480.01.T01 | AT1G64970 | 29.808 | 104 | 71 | 1 | 292 | 393 | 130 | 233 | 2.59e-11 | 65.5 |
Find 89 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTACTCTATGAACATGTTTA+TGG | 0.176357 | 6:+88308510 | MsG0680034480.01.T01:CDS |
TTCACCTATTACTCTTATTA+TGG | 0.203566 | 6:+88310796 | MsG0680034480.01.T01:three_prime_UTR |
CCTTACTTTGATGTGTAATA+AGG | 0.238801 | 6:-88309157 | None:intergenic |
TGCTGTTGATCAAACCAATT+TGG | 0.240782 | 6:+88309906 | MsG0680034480.01.T01:CDS |
TTGATTTGATATTCTCAAAT+TGG | 0.248443 | 6:+88307333 | MsG0680034480.01.T01:CDS |
AGCTAGAGAAATCATGTTTA+TGG | 0.260404 | 6:-88309028 | None:intergenic |
CTTCTCCATTCTCTCATATA+TGG | 0.261877 | 6:+88304264 | MsG0680034480.01.T01:exon |
TCTCTCATATATGGCTAGTT+TGG | 0.281400 | 6:+88304273 | MsG0680034480.01.T01:exon |
TTGCAGAATGAAAATAATAA+TGG | 0.286982 | 6:+88307239 | MsG0680034480.01.T01:intron |
TCCTTTGAGCTTTCTCTTGT+GGG | 0.294619 | 6:+88308236 | MsG0680034480.01.T01:CDS |
GTGTAGCTGGTGAGCAGATA+TGG | 0.296797 | 6:+88310608 | MsG0680034480.01.T01:CDS |
CTAGATGTTGGTTGTGGTAT+TGG | 0.308873 | 6:+88308946 | MsG0680034480.01.T01:CDS |
GAAACCATAATAAGAGTAAT+AGG | 0.323222 | 6:-88310800 | None:intergenic |
ACATGAACTTGACATTCTTA+TGG | 0.327278 | 6:-88307265 | None:intergenic |
TGGAAGATTTACAGCTGAAT+TGG | 0.333381 | 6:+88306871 | MsG0680034480.01.T01:CDS |
TCATGCAGATTTGTTGGATA+TGG | 0.335290 | 6:+88308412 | MsG0680034480.01.T01:intron |
CCTTCAGAAATATGCAAGTT+TGG | 0.346855 | 6:-88307305 | None:intergenic |
AATACAATCCAACTCACTAT+AGG | 0.347505 | 6:+88307736 | MsG0680034480.01.T01:CDS |
GAATCTTGTTTCCACCAATC+TGG | 0.358429 | 6:+88307699 | MsG0680034480.01.T01:CDS |
TCTTTGTCATGCAGATTTGT+TGG | 0.362351 | 6:+88308406 | MsG0680034480.01.T01:intron |
GTTAAATCACAAGATGATAG+AGG | 0.369519 | 6:+88308441 | MsG0680034480.01.T01:CDS |
GTCTCTCTTCTTTGTCGAGA+TGG | 0.371915 | 6:-88304605 | None:intergenic |
CTCCTTTGAGCTTTCTCTTG+TGG | 0.372126 | 6:+88308235 | MsG0680034480.01.T01:CDS |
ATACAATCCAACTCACTATA+GGG | 0.384922 | 6:+88307737 | MsG0680034480.01.T01:CDS |
AGGGAAATTGTGGCAAAGTT+AGG | 0.389582 | 6:+88308901 | MsG0680034480.01.T01:CDS |
GAGTGTGTGACAAACCAAAT+TGG | 0.399779 | 6:-88309920 | None:intergenic |
TTAGAGCTTGGAGCAGGTAT+TGG | 0.405980 | 6:+88306851 | MsG0680034480.01.T01:CDS |
CAAACCTTAGTGTAAAATCT+TGG | 0.408255 | 6:-88307762 | None:intergenic |
GTTCTTGAAAACTCTACAAA+TGG | 0.411827 | 6:+88310013 | MsG0680034480.01.T01:intron |
GTCAAATGGTTAAATGTTGA+TGG | 0.412539 | 6:+88307660 | MsG0680034480.01.T01:CDS |
TGACATGAAAGCATATTATC+AGG | 0.414876 | 6:+88309404 | MsG0680034480.01.T01:CDS |
GTGAAGTGCAAAGAAGTTAC+TGG | 0.416072 | 6:+88304526 | MsG0680034480.01.T01:CDS |
TCTCTCTTCTTTGTCGAGAT+GGG | 0.418673 | 6:-88304604 | None:intergenic |
TCACAGATGCTTGAGAATGC+TGG | 0.438992 | 6:+88309868 | MsG0680034480.01.T01:intron |
TTCTCTTTGAATCTCCAGAT+TGG | 0.440419 | 6:-88307713 | None:intergenic |
TGTCATATGAGTGATGATAA+TGG | 0.457058 | 6:+88308209 | MsG0680034480.01.T01:CDS |
TTTGTGAGCACAGGAGGACT+TGG | 0.457900 | 6:+88308540 | MsG0680034480.01.T01:CDS |
TGTAGCTGGTGAGCAGATAT+GGG | 0.458742 | 6:+88310609 | MsG0680034480.01.T01:CDS |
TGAAGTCCACAGCAAGCAAT+TGG | 0.460367 | 6:-88306907 | None:intergenic |
GTCATATGAGTGATGATAAT+GGG | 0.461100 | 6:+88308210 | MsG0680034480.01.T01:CDS |
TAGCTGAAAGGATGGTCAAA+TGG | 0.462289 | 6:+88307646 | MsG0680034480.01.T01:CDS |
TAAAATGATCTGAACAATGT+TGG | 0.463358 | 6:-88309270 | None:intergenic |
ATAATGAAATTGTTGAAAGA+TGG | 0.474872 | 6:+88310566 | MsG0680034480.01.T01:CDS |
TCTTTGAATCTCCAGATTGG+TGG | 0.475051 | 6:-88307710 | None:intergenic |
AAATAAGAAGAATCAAAATC+AGG | 0.476569 | 6:+88308286 | MsG0680034480.01.T01:CDS |
CTTGCATATTTCTGAAGGAT+CGG | 0.493828 | 6:+88307310 | MsG0680034480.01.T01:CDS |
GCTGAATTGGCTCAGAAAGC+TGG | 0.494705 | 6:+88306884 | MsG0680034480.01.T01:CDS |
CTTGGTTCCCTATAGTGAGT+TGG | 0.500725 | 6:-88307744 | None:intergenic |
TATGAACATGTTTATGGTCA+AGG | 0.501805 | 6:+88308516 | MsG0680034480.01.T01:CDS |
ACTAGCCATATATGAGAGAA+TGG | 0.502014 | 6:-88304269 | None:intergenic |
GTTGGTTGTGGTATTGGAGG+TGG | 0.503392 | 6:+88308952 | MsG0680034480.01.T01:CDS |
CATTTACTTCCATATAAAAG+AGG | 0.504157 | 6:-88310768 | None:intergenic |
TCTCTATTACCAGCATATGA+AGG | 0.509429 | 6:+88306818 | MsG0680034480.01.T01:CDS |
GATAATATGCTTTCATGTCA+TGG | 0.509905 | 6:-88309401 | None:intergenic |
AATCAACCTTCTTGTTCTCA+AGG | 0.512925 | 6:-88310046 | None:intergenic |
CATAGAGTAAGATATCTTTG+TGG | 0.519852 | 6:-88308497 | None:intergenic |
ACTGACTATTGCAAAAGTGT+TGG | 0.520445 | 6:+88309327 | MsG0680034480.01.T01:CDS |
CTAGCTATCGAACGTGCCAT+CGG | 0.524887 | 6:+88309045 | MsG0680034480.01.T01:CDS |
AAGCAGATGAGAGGTGTAGC+TGG | 0.525626 | 6:+88310595 | MsG0680034480.01.T01:CDS |
GATGTTGGTTGTGGTATTGG+AGG | 0.526855 | 6:+88308949 | MsG0680034480.01.T01:CDS |
CATGTATCTTTCAGATGAAG+AGG | 0.527858 | 6:+88307361 | MsG0680034480.01.T01:CDS |
CCAAACTTGCATATTTCTGA+AGG | 0.528360 | 6:+88307305 | MsG0680034480.01.T01:CDS |
GGTCAAGGCTTTGTGAGCAC+AGG | 0.534562 | 6:+88308531 | MsG0680034480.01.T01:CDS |
CATTGAGAGTGCAATAAAGA+AGG | 0.534730 | 6:+88306928 | MsG0680034480.01.T01:CDS |
GTAATTAAAAGTGTACCTCC+AGG | 0.542732 | 6:-88309306 | None:intergenic |
CAACACAATTATTAATGGAA+AGG | 0.543112 | 6:-88310717 | None:intergenic |
AGCTGGCCAATTGCTTGCTG+TGG | 0.543614 | 6:+88306901 | MsG0680034480.01.T01:CDS |
CTCTTCTTTGTCGAGATGGG+AGG | 0.545903 | 6:-88304601 | None:intergenic |
CTTGTGGGATGCAAATGCAT+TGG | 0.550546 | 6:+88308251 | MsG0680034480.01.T01:CDS |
CAAGGCTTTGTGAGCACAGG+AGG | 0.555847 | 6:+88308534 | MsG0680034480.01.T01:CDS |
TACTGAGTATTTGAGTCCGA+TGG | 0.557525 | 6:-88309061 | None:intergenic |
ATCAACCTTCTTGTTCTCAA+GGG | 0.563447 | 6:-88310045 | None:intergenic |
GAAATGAAGAAAGTAATCAA+TGG | 0.563809 | 6:-88304225 | None:intergenic |
TTAAATCACAAGATGATAGA+GGG | 0.564358 | 6:+88308442 | MsG0680034480.01.T01:CDS |
AGAAACAACAAGGGAAATTG+TGG | 0.570096 | 6:+88308891 | MsG0680034480.01.T01:intron |
ATTCTTGAGCAGAAACAACA+AGG | 0.575658 | 6:+88308881 | MsG0680034480.01.T01:intron |
AAGATGATAGAGGGTTTCAA+AGG | 0.577951 | 6:+88308451 | MsG0680034480.01.T01:CDS |
TGAAATTGTTGAAAGATGGA+AGG | 0.578969 | 6:+88310570 | MsG0680034480.01.T01:CDS |
AAATGCCCTTGAGAACAAGA+AGG | 0.581850 | 6:+88310040 | MsG0680034480.01.T01:CDS |
AAAGTACTAGATGTTGGTTG+TGG | 0.613287 | 6:+88308940 | MsG0680034480.01.T01:CDS |
GAGAAATCATGTTTATGGAG+AGG | 0.618544 | 6:-88309023 | None:intergenic |
TGGAAGGCTAAGCAGATGAG+AGG | 0.635467 | 6:+88310586 | MsG0680034480.01.T01:CDS |
TTCTTGAGCAGAAACAACAA+GGG | 0.645125 | 6:+88308882 | MsG0680034480.01.T01:intron |
AGTTTGGAAGCAATGAAACA+AGG | 0.646586 | 6:+88304289 | MsG0680034480.01.T01:CDS |
GCAAAGTTAGGACTAAAGCC+AGG | 0.647033 | 6:+88308913 | MsG0680034480.01.T01:CDS |
TCCCACAAGAGAAAGCTCAA+AGG | 0.650134 | 6:-88308237 | None:intergenic |
TATAAGTGGTTGAAGCCTGG+AGG | 0.668799 | 6:+88309291 | MsG0680034480.01.T01:CDS |
GTAGCTGGTGAGCAGATATG+GGG | 0.669642 | 6:+88310610 | MsG0680034480.01.T01:CDS |
TTTCATTGATGATTTCTCTG+AGG | 0.680525 | 6:+88310067 | MsG0680034480.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATAATAAATAATTAAT+AGG | - | Chr6:88306708-88306727 | None:intergenic | 0.0% |
!! | AAATAAGTTAAAAATATGAT+TGG | - | Chr6:88306576-88306595 | None:intergenic | 10.0% |
!! | ATATGTTTATTACATATTAT+AGG | + | Chr6:88309453-88309472 | MsG0680034480.01.T01:intron | 10.0% |
!! | TAAAATAAAATAAATAGAAG+TGG | - | Chr6:88306532-88306551 | None:intergenic | 10.0% |
!! | TTGATATAGTATATTAAAAT+AGG | - | Chr6:88306135-88306154 | None:intergenic | 10.0% |
!!! | ATTAACAAGTTAATTTTTTA+AGG | - | Chr6:88304944-88304963 | None:intergenic | 10.0% |
!!! | TTAACAAGTTAATTTTTTAA+GGG | - | Chr6:88304943-88304962 | None:intergenic | 10.0% |
!! | AAAAACAACACAATTATTAA+TGG | - | Chr6:88310725-88310744 | None:intergenic | 15.0% |
!! | AAAAAGGAAAATAATGAATT+TGG | - | Chr6:88309204-88309223 | None:intergenic | 15.0% |
!! | AAAATATTGTATGATATTCA+AGG | - | Chr6:88307220-88307239 | None:intergenic | 15.0% |
!! | AATGTTCTATGAATTTATAT+AGG | + | Chr6:88309242-88309261 | MsG0680034480.01.T01:intron | 15.0% |
!! | ATAACTAAATGTTACAAAAA+AGG | - | Chr6:88309220-88309239 | None:intergenic | 15.0% |
!! | ATATAATTACATTAACAACA+AGG | - | Chr6:88309437-88309456 | None:intergenic | 15.0% |
!! | CCAATTTAAATGTATATTTA+GGG | + | Chr6:88305277-88305296 | MsG0680034480.01.T01:intron | 15.0% |
!! | CCTAAATATACATTTAAATT+GGG | - | Chr6:88305279-88305298 | None:intergenic | 15.0% |
!! | GGTATTTATCAAAATAAAAT+TGG | + | Chr6:88307166-88307185 | MsG0680034480.01.T01:intron | 15.0% |
!! | TAGTATAAAACAAAGTAATA+AGG | - | Chr6:88309945-88309964 | None:intergenic | 15.0% |
!! | TATATATCATACATAGATTA+AGG | + | Chr6:88304440-88304459 | MsG0680034480.01.T01:intron | 15.0% |
!! | TATGTAAGAATTCTAATAAA+TGG | - | Chr6:88308626-88308645 | None:intergenic | 15.0% |
!! | TTTAATAAATTGTAGTTACT+TGG | + | Chr6:88305028-88305047 | MsG0680034480.01.T01:intron | 15.0% |
!! | TTTGTATTTATAAAGTAGTT+TGG | + | Chr6:88306398-88306417 | MsG0680034480.01.T01:intron | 15.0% |
!!! | ATAATTGTAATGATTTTTTC+AGG | + | Chr6:88304489-88304508 | MsG0680034480.01.T01:intron | 15.0% |
!!! | ATCTATTTTAAATTACACAT+AGG | + | Chr6:88306790-88306809 | MsG0680034480.01.T01:intron | 15.0% |
!!! | TACTAACTAAATTTTGTTTA+CGG | + | Chr6:88306479-88306498 | MsG0680034480.01.T01:intron | 15.0% |
!!! | TCTTTTATGTTGTTAATTAT+AGG | + | Chr6:88306279-88306298 | MsG0680034480.01.T01:intron | 15.0% |
!!! | TTAACATGTTATTTTCTAAT+TGG | + | Chr6:88306673-88306692 | MsG0680034480.01.T01:intron | 15.0% |
!!! | TTTTTATAAACTCTGAAAAT+TGG | + | Chr6:88310231-88310250 | MsG0680034480.01.T01:intron | 15.0% |
!!! | TTTTTGAAATCTTCATTTTT+AGG | + | Chr6:88310537-88310556 | MsG0680034480.01.T01:intron | 15.0% |
!! | AAACAATAACATGTCTAATA+GGG | - | Chr6:88307089-88307108 | None:intergenic | 20.0% |
!! | AAAGTTTGATTGATACATAT+GGG | + | Chr6:88304796-88304815 | MsG0680034480.01.T01:intron | 20.0% |
!! | AAATAAGAAGAATCAAAATC+AGG | + | Chr6:88308286-88308305 | MsG0680034480.01.T01:CDS | 20.0% |
!! | AACAACATAAAAGAAAATTG+TGG | - | Chr6:88306273-88306292 | None:intergenic | 20.0% |
!! | ACAACATAAAAGAAAATTGT+GGG | - | Chr6:88306272-88306291 | None:intergenic | 20.0% |
!! | AGATGTAATCACAATAAAAA+CGG | - | Chr6:88308734-88308753 | None:intergenic | 20.0% |
!! | ATAATGAAATTGTTGAAAGA+TGG | + | Chr6:88310566-88310585 | MsG0680034480.01.T01:CDS | 20.0% |
!! | ATTATTAAAATCGAGAGTTT+AGG | - | Chr6:88310317-88310336 | None:intergenic | 20.0% |
!! | CAATATGAATCCAATATTTA+TGG | + | Chr6:88305137-88305156 | MsG0680034480.01.T01:intron | 20.0% |
!! | CCCAATTTAAATGTATATTT+AGG | + | Chr6:88305276-88305295 | MsG0680034480.01.T01:intron | 20.0% |
!! | CCCTAAATATACATTTAAAT+TGG | - | Chr6:88305280-88305299 | None:intergenic | 20.0% |
!! | GTGCTTCATATATATTTATA+GGG | - | Chr6:88306975-88306994 | None:intergenic | 20.0% |
!! | TAAAGTTTGATTGATACATA+TGG | + | Chr6:88304795-88304814 | MsG0680034480.01.T01:intron | 20.0% |
!! | TAATTAGACACATACATTAA+GGG | - | Chr6:88307575-88307594 | None:intergenic | 20.0% |
!! | TACACCAATTTATTATTCTT+GGG | + | Chr6:88309963-88309982 | MsG0680034480.01.T01:intron | 20.0% |
!! | TACATCAAAATTTAAGAGTT+TGG | - | Chr6:88310483-88310502 | None:intergenic | 20.0% |
!! | TATAATCAAACAATTGTTGT+TGG | - | Chr6:88307818-88307837 | None:intergenic | 20.0% |
!! | TCGTTGTATATTATTAACTT+TGG | + | Chr6:88306052-88306071 | MsG0680034480.01.T01:intron | 20.0% |
!! | TGCTTCATATATATTTATAG+GGG | - | Chr6:88306974-88306993 | None:intergenic | 20.0% |
!! | TTAAATACCTACATGAAAAA+GGG | - | Chr6:88308185-88308204 | None:intergenic | 20.0% |
!! | TTGCAGAATGAAAATAATAA+TGG | + | Chr6:88307239-88307258 | MsG0680034480.01.T01:intron | 20.0% |
!! | TTTAAATACCTACATGAAAA+AGG | - | Chr6:88308186-88308205 | None:intergenic | 20.0% |
!!! | AAAGAAACATCATTTTTTCT+TGG | - | Chr6:88310647-88310666 | None:intergenic | 20.0% |
!!! | ACTAACTAAATTTTGTTTAC+GGG | + | Chr6:88306480-88306499 | MsG0680034480.01.T01:intron | 20.0% |
!!! | AGATCTACATTTTACTAATT+TGG | + | Chr6:88306236-88306255 | MsG0680034480.01.T01:intron | 20.0% |
!!! | AGTTTTTTGTTTTTCTATGA+AGG | + | Chr6:88307386-88307405 | MsG0680034480.01.T01:intron | 20.0% |
!!! | ATCTACATTTTACTAATTTG+GGG | + | Chr6:88306238-88306257 | MsG0680034480.01.T01:intron | 20.0% |
!!! | CTAATATGTATTTTAAAGAG+AGG | + | Chr6:88305651-88305670 | MsG0680034480.01.T01:intron | 20.0% |
!!! | CTTCTTTTAATTTAACTAAG+TGG | + | Chr6:88305775-88305794 | MsG0680034480.01.T01:intron | 20.0% |
!!! | GATCTACATTTTACTAATTT+GGG | + | Chr6:88306237-88306256 | MsG0680034480.01.T01:intron | 20.0% |
!!! | TACTTGGTGTTAATTATATT+TGG | + | Chr6:88305044-88305063 | MsG0680034480.01.T01:intron | 20.0% |
!!! | TTGATTTGATATTCTCAAAT+TGG | + | Chr6:88307333-88307352 | MsG0680034480.01.T01:CDS | 20.0% |
!!! | TTTAAATTGGGTTTTTTAGT+AGG | - | Chr6:88305267-88305286 | None:intergenic | 20.0% |
!!! | TTTTAACCTGAAATTAATCA+AGG | - | Chr6:88307623-88307642 | None:intergenic | 20.0% |
!!! | TTTTTGTCTTGTATTACAAT+TGG | + | Chr6:88305385-88305404 | MsG0680034480.01.T01:intron | 20.0% |
!!! | TTTTTTCCTTGATTAATTTC+AGG | + | Chr6:88307614-88307633 | MsG0680034480.01.T01:intron | 20.0% |
! | AACATAAAAGAAAATTGTGG+GGG | - | Chr6:88306270-88306289 | None:intergenic | 25.0% |
! | AAGATAAAACTCGATATATG+TGG | - | Chr6:88305804-88305823 | None:intergenic | 25.0% |
! | AATAATATGATATGACACAC+TGG | - | Chr6:88305600-88305619 | None:intergenic | 25.0% |
! | ACAACCCAAGAATAATAAAT+TGG | - | Chr6:88309970-88309989 | None:intergenic | 25.0% |
! | ACAACTTGAATTAGAGATAA+AGG | + | Chr6:88305431-88305450 | MsG0680034480.01.T01:intron | 25.0% |
! | AGGTTAAAAATTTAGCTGAA+AGG | + | Chr6:88307634-88307653 | MsG0680034480.01.T01:intron | 25.0% |
! | ATTCTAAATTTGAGTCATCA+TGG | - | Chr6:88307540-88307559 | None:intergenic | 25.0% |
! | CAAACAATAACATGTCTAAT+AGG | - | Chr6:88307090-88307109 | None:intergenic | 25.0% |
! | CAACACAATTATTAATGGAA+AGG | - | Chr6:88310720-88310739 | None:intergenic | 25.0% |
! | CAACATAAAAGAAAATTGTG+GGG | - | Chr6:88306271-88306290 | None:intergenic | 25.0% |
! | CAACTTGAATTAGAGATAAA+GGG | + | Chr6:88305432-88305451 | MsG0680034480.01.T01:intron | 25.0% |
! | CAATTGTTTGATTATAGATG+AGG | + | Chr6:88307822-88307841 | MsG0680034480.01.T01:intron | 25.0% |
! | CATAGCTACATATTTATGAT+TGG | + | Chr6:88307145-88307164 | MsG0680034480.01.T01:intron | 25.0% |
! | CATTTACTTCCATATAAAAG+AGG | - | Chr6:88310771-88310790 | None:intergenic | 25.0% |
! | CCTATACAGATATTTGAAAA+CGG | - | Chr6:88310396-88310415 | None:intergenic | 25.0% |
! | CTACACCAATTTATTATTCT+TGG | + | Chr6:88309962-88309981 | MsG0680034480.01.T01:intron | 25.0% |
! | CTTATTACACATCAAAGTAA+GGG | + | Chr6:88309158-88309177 | MsG0680034480.01.T01:intron | 25.0% |
! | GAAACCATAATAAGAGTAAT+AGG | - | Chr6:88310803-88310822 | None:intergenic | 25.0% |
! | GAAATGAAGAAAGTAATCAA+TGG | - | Chr6:88304228-88304247 | None:intergenic | 25.0% |
! | GAATCCAATATTTATGGATT+TGG | + | Chr6:88305143-88305162 | MsG0680034480.01.T01:intron | 25.0% |
! | GATATTATTGTGAACTTTGA+TGG | + | Chr6:88308045-88308064 | MsG0680034480.01.T01:intron | 25.0% |
! | GGTGCTTCATATATATTTAT+AGG | - | Chr6:88306976-88306995 | None:intergenic | 25.0% |
! | GTAATTAGACACATACATTA+AGG | - | Chr6:88307576-88307595 | None:intergenic | 25.0% |
! | TAAAAATTTAGCTGAAAGGA+TGG | + | Chr6:88307638-88307657 | MsG0680034480.01.T01:CDS | 25.0% |
! | TAAAATGATCTGAACAATGT+TGG | - | Chr6:88309273-88309292 | None:intergenic | 25.0% |
! | TAAATACCTACATGAAAAAG+GGG | - | Chr6:88308184-88308203 | None:intergenic | 25.0% |
! | TAGAAAATAAAGCTTATGCA+TGG | - | Chr6:88308122-88308141 | None:intergenic | 25.0% |
! | TGATCCAAATCCATAAATAT+TGG | - | Chr6:88305150-88305169 | None:intergenic | 25.0% |
! | TGCATTTGATATGCTAAAAA+AGG | - | Chr6:88305528-88305547 | None:intergenic | 25.0% |
! | TTAAAAAATGTGCGTATTCA+AGG | + | Chr6:88304972-88304991 | MsG0680034480.01.T01:intron | 25.0% |
! | TTAAATCACAAGATGATAGA+GGG | + | Chr6:88308442-88308461 | MsG0680034480.01.T01:CDS | 25.0% |
! | TTACTCTATGAACATGTTTA+TGG | + | Chr6:88308510-88308529 | MsG0680034480.01.T01:CDS | 25.0% |
! | TTATGCAAGTTTACAATTGT+TGG | + | Chr6:88310170-88310189 | MsG0680034480.01.T01:intron | 25.0% |
! | TTCACCTATTACTCTTATTA+TGG | + | Chr6:88310796-88310815 | MsG0680034480.01.T01:three_prime_UTR | 25.0% |
!! | TATTTTCTAATTGGAGAACA+AGG | + | Chr6:88306682-88306701 | MsG0680034480.01.T01:intron | 25.0% |
!! | TGGTGTTAATTATATTTGGA+TGG | + | Chr6:88305048-88305067 | MsG0680034480.01.T01:intron | 25.0% |
!! | TGTTCAGATCATTTTATAAG+TGG | + | Chr6:88309277-88309296 | MsG0680034480.01.T01:CDS | 25.0% |
!!! | ATTGTAATGATTTTTTCAGG+TGG | + | Chr6:88304492-88304511 | MsG0680034480.01.T01:intron | 25.0% |
!!! | CCAATTTTATCGTGTTTTAA+CGG | + | Chr6:88305241-88305260 | MsG0680034480.01.T01:intron | 25.0% |
!!! | GTAAGATTTTGAGTTTAAAC+TGG | + | Chr6:88305477-88305496 | MsG0680034480.01.T01:intron | 25.0% |
!!! | TAATTGTGTTGTTTTTAGCT+TGG | + | Chr6:88310729-88310748 | MsG0680034480.01.T01:three_prime_UTR | 25.0% |
!!! | TATTTTGAACCAGTCTAAAT+GGG | + | Chr6:88305215-88305234 | MsG0680034480.01.T01:intron | 25.0% |
!!! | TGAATACGCACATTTTTTAA+TGG | - | Chr6:88304972-88304991 | None:intergenic | 25.0% |
!!! | TGTCTAATTACTTGTTGTTA+AGG | + | Chr6:88307585-88307604 | MsG0680034480.01.T01:intron | 25.0% |
!!! | TTATTTTGAACCAGTCTAAA+TGG | + | Chr6:88305214-88305233 | MsG0680034480.01.T01:intron | 25.0% |
!!! | TTTGATTTACCGTTTTGTTT+CGG | + | Chr6:88305891-88305910 | MsG0680034480.01.T01:intron | 25.0% |
AAAGACATGTTATAAGGACA+TGG | + | Chr6:88308069-88308088 | MsG0680034480.01.T01:intron | 30.0% | |
AAATTAGTAGCACATACTTC+GGG | - | Chr6:88304630-88304649 | None:intergenic | 30.0% | |
AAGAGAAAGAAGATGCATTA+GGG | - | Chr6:88305758-88305777 | None:intergenic | 30.0% | |
AAGTCAAACATGTTAATGAC+CGG | + | Chr6:88307988-88308007 | MsG0680034480.01.T01:intron | 30.0% | |
AATACAATCCAACTCACTAT+AGG | + | Chr6:88307736-88307755 | MsG0680034480.01.T01:CDS | 30.0% | |
ACATACATTAAGGGACAAAA+TGG | - | Chr6:88307566-88307585 | None:intergenic | 30.0% | |
ACATGAACTTGACATTCTTA+TGG | - | Chr6:88307268-88307287 | None:intergenic | 30.0% | |
AGAAAGATAACTTAGAGAGA+AGG | - | Chr6:88305684-88305703 | None:intergenic | 30.0% | |
AGCTAGAGAAATCATGTTTA+TGG | - | Chr6:88309031-88309050 | None:intergenic | 30.0% | |
ATAATCGACATGAAATCAGA+CGG | - | Chr6:88308767-88308786 | None:intergenic | 30.0% | |
ATACAATCCAACTCACTATA+GGG | + | Chr6:88307737-88307756 | MsG0680034480.01.T01:CDS | 30.0% | |
CAAACCTTAGTGTAAAATCT+TGG | - | Chr6:88307765-88307784 | None:intergenic | 30.0% | |
CACATCTTCAATATGAAGTT+TGG | - | Chr6:88306997-88307016 | None:intergenic | 30.0% | |
CATAGAGTAAGATATCTTTG+TGG | - | Chr6:88308500-88308519 | None:intergenic | 30.0% | |
CCGTTAAAACACGATAAAAT+TGG | - | Chr6:88305244-88305263 | None:intergenic | 30.0% | |
CCTTACTTTGATGTGTAATA+AGG | - | Chr6:88309160-88309179 | None:intergenic | 30.0% | |
CCTTATTACACATCAAAGTA+AGG | + | Chr6:88309157-88309176 | MsG0680034480.01.T01:intron | 30.0% | |
GAAATTAGTAGCACATACTT+CGG | - | Chr6:88304631-88304650 | None:intergenic | 30.0% | |
GAATAGTCAGTTAGTTGTAT+AGG | - | Chr6:88304665-88304684 | None:intergenic | 30.0% | |
GACTAGAATATTCATGTCTT+TGG | - | Chr6:88305997-88306016 | None:intergenic | 30.0% | |
GACTTCATTTAATCCAAATC+CGG | - | Chr6:88307422-88307441 | None:intergenic | 30.0% | |
GATAATATGCTTTCATGTCA+TGG | - | Chr6:88309404-88309423 | None:intergenic | 30.0% | |
GATGGTAAAGACATGTTATA+AGG | + | Chr6:88308063-88308082 | MsG0680034480.01.T01:intron | 30.0% | |
GCAGAGTATATAAAAAAGAG+AGG | + | Chr6:88309369-88309388 | MsG0680034480.01.T01:CDS | 30.0% | |
GGTTGTATTGTGGTTTATTA+AGG | + | Chr6:88305453-88305472 | MsG0680034480.01.T01:intron | 30.0% | |
GTCAAATGGTTAAATGTTGA+TGG | + | Chr6:88307660-88307679 | MsG0680034480.01.T01:CDS | 30.0% | |
GTTAAATCACAAGATGATAG+AGG | + | Chr6:88308441-88308460 | MsG0680034480.01.T01:CDS | 30.0% | |
GTTCTTGAAAACTCTACAAA+TGG | + | Chr6:88310013-88310032 | MsG0680034480.01.T01:intron | 30.0% | |
TATGAACATGTTTATGGTCA+AGG | + | Chr6:88308516-88308535 | MsG0680034480.01.T01:CDS | 30.0% | |
TCAGTTAGTTGTATAGGATT+AGG | - | Chr6:88304659-88304678 | None:intergenic | 30.0% | |
TGAAATTGTTGAAAGATGGA+AGG | + | Chr6:88310570-88310589 | MsG0680034480.01.T01:CDS | 30.0% | |
TTGTCTTGTATTACAATTGG+TGG | + | Chr6:88305388-88305407 | MsG0680034480.01.T01:intron | 30.0% | |
! | ATAGTTTTTCGTCATGAATG+TGG | - | Chr6:88304895-88304914 | None:intergenic | 30.0% |
! | ATCAAAAAGTACAACGTTGT+TGG | + | Chr6:88304363-88304382 | MsG0680034480.01.T01:intron | 30.0% |
! | ATTACATCGAATGTTTTCTC+AGG | - | Chr6:88309123-88309142 | None:intergenic | 30.0% |
! | CAATTATGAGCCTTTTCTTT+TGG | - | Chr6:88306636-88306655 | None:intergenic | 30.0% |
! | CCGTTTTCAAATATCTGTAT+AGG | + | Chr6:88310393-88310412 | MsG0680034480.01.T01:intron | 30.0% |
! | CTCTAAATAGCACTTTTAGT+CGG | + | Chr6:88308687-88308706 | MsG0680034480.01.T01:intron | 30.0% |
! | CTTTTCTTTTGGTAAAGAGA+CGG | - | Chr6:88306625-88306644 | None:intergenic | 30.0% |
! | GTTATGCTTCCTCTTTTATA+TGG | + | Chr6:88310759-88310778 | MsG0680034480.01.T01:three_prime_UTR | 30.0% |
! | TACATTTTACTAATTTGGGG+TGG | + | Chr6:88306241-88306260 | MsG0680034480.01.T01:intron | 30.0% |
! | TATTTAGGGTGTGTTTGATA+CGG | + | Chr6:88305291-88305310 | MsG0680034480.01.T01:intron | 30.0% |
! | TGACATGAAAGCATATTATC+AGG | + | Chr6:88309404-88309423 | MsG0680034480.01.T01:CDS | 30.0% |
! | TTTCATTGATGATTTCTCTG+AGG | + | Chr6:88310067-88310086 | MsG0680034480.01.T01:CDS | 30.0% |
! | TTTGGTTTCTATTGAAAGAC+TGG | + | Chr6:88305920-88305939 | MsG0680034480.01.T01:intron | 30.0% |
!! | ATGAAGTATTGAATCAGATG+CGG | - | Chr6:88307128-88307147 | None:intergenic | 30.0% |
!! | TCATCGACTTAATTTAGACT+CGG | + | Chr6:88307848-88307867 | MsG0680034480.01.T01:intron | 30.0% |
!!! | AGCTTTTTAGTTTCATGTAG+TGG | - | Chr6:88306339-88306358 | None:intergenic | 30.0% |
!!! | CACTTTTTAGAGTGAATAAG+TGG | + | Chr6:88306432-88306451 | MsG0680034480.01.T01:intron | 30.0% |
!!! | CTTTTTAGTTTCATGTAGTG+GGG | - | Chr6:88306337-88306356 | None:intergenic | 30.0% |
!!! | GCTTTTTAGTTTCATGTAGT+GGG | - | Chr6:88306338-88306357 | None:intergenic | 30.0% |
!!! | TTTCTCAGGATACGTTTTTT+TGG | - | Chr6:88309109-88309128 | None:intergenic | 30.0% |
AAACCAACACCGAAACAAAA+CGG | - | Chr6:88305903-88305922 | None:intergenic | 35.0% | |
AAAGCTTATGCATGGCAATT+TGG | - | Chr6:88308114-88308133 | None:intergenic | 35.0% | |
AACTTTGATTCTACTAGGGT+TGG | + | Chr6:88305573-88305592 | MsG0680034480.01.T01:intron | 35.0% | |
AAGATGATAGAGGGTTTCAA+AGG | + | Chr6:88308451-88308470 | MsG0680034480.01.T01:CDS | 35.0% | |
AATCAACCTTCTTGTTCTCA+AGG | - | Chr6:88310049-88310068 | None:intergenic | 35.0% | |
ACAAATACACACACAGACAT+CGG | + | Chr6:88309558-88309577 | MsG0680034480.01.T01:intron | 35.0% | |
ACTAGCCATATATGAGAGAA+TGG | - | Chr6:88304272-88304291 | None:intergenic | 35.0% | |
AGAAACAACAAGGGAAATTG+TGG | + | Chr6:88308891-88308910 | MsG0680034480.01.T01:intron | 35.0% | |
AGAGATAAAGGGTTGTATTG+TGG | + | Chr6:88305443-88305462 | MsG0680034480.01.T01:intron | 35.0% | |
AGTGGGGACATTATTAAAGT+GGG | - | Chr6:88306321-88306340 | None:intergenic | 35.0% | |
AGTTTGGAAGCAATGAAACA+AGG | + | Chr6:88304289-88304308 | MsG0680034480.01.T01:CDS | 35.0% | |
ATCAACCTTCTTGTTCTCAA+GGG | - | Chr6:88310048-88310067 | None:intergenic | 35.0% | |
ATCTATCGATCGTTAATCGA+TGG | - | Chr6:88308592-88308611 | None:intergenic | 35.0% | |
ATTCTTGAGCAGAAACAACA+AGG | + | Chr6:88308881-88308900 | MsG0680034480.01.T01:intron | 35.0% | |
CAAACACAAACTATGAAGCA+CGG | - | Chr6:88309738-88309757 | None:intergenic | 35.0% | |
CATGTATCTTTCAGATGAAG+AGG | + | Chr6:88307361-88307380 | MsG0680034480.01.T01:CDS | 35.0% | |
CCAAAGAGGATGAGAAATAA+TGG | - | Chr6:88306212-88306231 | None:intergenic | 35.0% | |
CCATAGTGAACCATCAATAA+CGG | - | Chr6:88308657-88308676 | None:intergenic | 35.0% | |
CCTTCAGAAATATGCAAGTT+TGG | - | Chr6:88307308-88307327 | None:intergenic | 35.0% | |
CGTCTCTTTACCAAAAGAAA+AGG | + | Chr6:88306623-88306642 | MsG0680034480.01.T01:intron | 35.0% | |
CTTCTCCATTCTCTCATATA+TGG | + | Chr6:88304264-88304283 | MsG0680034480.01.T01:exon | 35.0% | |
GAAGAGAAAGAAGATGCATT+AGG | - | Chr6:88305759-88305778 | None:intergenic | 35.0% | |
GAGAAATCATGTTTATGGAG+AGG | - | Chr6:88309026-88309045 | None:intergenic | 35.0% | |
GCGTAACTTTGATTCTACTA+GGG | + | Chr6:88305569-88305588 | MsG0680034480.01.T01:intron | 35.0% | |
GCTAAAATGAAACAATGCGA+CGG | - | Chr6:88310374-88310393 | None:intergenic | 35.0% | |
GTGTTTGATACGGTAAGTAT+TGG | + | Chr6:88305301-88305320 | MsG0680034480.01.T01:intron | 35.0% | |
TAATCGATGGTTTATCGATG+AGG | - | Chr6:88308579-88308598 | None:intergenic | 35.0% | |
TAGTGGGGACATTATTAAAG+TGG | - | Chr6:88306322-88306341 | None:intergenic | 35.0% | |
TATCTTTCTCCATCATCCAT+CGG | + | Chr6:88305695-88305714 | MsG0680034480.01.T01:intron | 35.0% | |
TCTCTATTACCAGCATATGA+AGG | + | Chr6:88306818-88306837 | MsG0680034480.01.T01:CDS | 35.0% | |
TCTTTGTCATGCAGATTTGT+TGG | + | Chr6:88308406-88308425 | MsG0680034480.01.T01:intron | 35.0% | |
TGCGTAACTTTGATTCTACT+AGG | + | Chr6:88305568-88305587 | MsG0680034480.01.T01:intron | 35.0% | |
TGCTGTTGATCAAACCAATT+TGG | + | Chr6:88309906-88309925 | MsG0680034480.01.T01:CDS | 35.0% | |
TGGAAGATTTACAGCTGAAT+TGG | + | Chr6:88306871-88306890 | MsG0680034480.01.T01:CDS | 35.0% | |
TGTCAGTGTGATTTCAAAGT+TGG | - | Chr6:88307028-88307047 | None:intergenic | 35.0% | |
TTCTCTTTGAATCTCCAGAT+TGG | - | Chr6:88307716-88307735 | None:intergenic | 35.0% | |
TTCTTGAGCAGAAACAACAA+GGG | + | Chr6:88308882-88308901 | MsG0680034480.01.T01:intron | 35.0% | |
! | AAAAGTACAACGTTGTTGGT+TGG | + | Chr6:88304367-88304386 | MsG0680034480.01.T01:intron | 35.0% |
! | AAAGTACTAGATGTTGGTTG+TGG | + | Chr6:88308940-88308959 | MsG0680034480.01.T01:CDS | 35.0% |
! | ACTGACTATTGCAAAAGTGT+TGG | + | Chr6:88309327-88309346 | MsG0680034480.01.T01:CDS | 35.0% |
! | AGATGCATTAGGGTGATTTT+AGG | - | Chr6:88305748-88305767 | None:intergenic | 35.0% |
! | CATTGAGAGTGCAATAAAGA+AGG | + | Chr6:88306928-88306947 | MsG0680034480.01.T01:CDS | 35.0% |
! | CCAAACTTGCATATTTCTGA+AGG | + | Chr6:88307305-88307324 | MsG0680034480.01.T01:CDS | 35.0% |
! | CCATTATTTCTCATCCTCTT+TGG | + | Chr6:88306209-88306228 | MsG0680034480.01.T01:intron | 35.0% |
! | CTATGAAGGCATAGAATATC+CGG | + | Chr6:88307400-88307419 | MsG0680034480.01.T01:intron | 35.0% |
! | CTTGCATATTTCTGAAGGAT+CGG | + | Chr6:88307310-88307329 | MsG0680034480.01.T01:CDS | 35.0% |
! | GGAACCAAGATTTTACACTA+AGG | + | Chr6:88307758-88307777 | MsG0680034480.01.T01:CDS | 35.0% |
! | GTAATTAAAAGTGTACCTCC+AGG | - | Chr6:88309309-88309328 | None:intergenic | 35.0% |
! | TAGTCAGCGTGAATGTATTT+TGG | + | Chr6:88306763-88306782 | MsG0680034480.01.T01:intron | 35.0% |
! | TCTCTCATATATGGCTAGTT+TGG | + | Chr6:88304273-88304292 | MsG0680034480.01.T01:exon | 35.0% |
! | TTTTATAAGTGGTTGAAGCC+TGG | + | Chr6:88309288-88309307 | MsG0680034480.01.T01:CDS | 35.0% |
! | TTTTGGTAAAGAGACGGTTA+TGG | - | Chr6:88306619-88306638 | None:intergenic | 35.0% |
!! | ACATCTAGTACTTTTTGACC+TGG | - | Chr6:88308934-88308953 | None:intergenic | 35.0% |
!! | ACTGATTTTCCTTCATATGC+TGG | - | Chr6:88306830-88306849 | None:intergenic | 35.0% |
!! | GGCTGAAAATTTTGATGTTG+AGG | + | Chr6:88308987-88309006 | MsG0680034480.01.T01:CDS | 35.0% |
!! | GGTCAAAAAGTACTAGATGT+TGG | + | Chr6:88308934-88308953 | MsG0680034480.01.T01:CDS | 35.0% |
!! | TATCTTCCCCTTTTTCATGT+AGG | + | Chr6:88308175-88308194 | MsG0680034480.01.T01:intron | 35.0% |
!! | TCATGCAGATTTGTTGGATA+TGG | + | Chr6:88308412-88308431 | MsG0680034480.01.T01:intron | 35.0% |
!!! | GGAAAATCAGTTTTAGAGCT+TGG | + | Chr6:88306839-88306858 | MsG0680034480.01.T01:CDS | 35.0% |
AAATGCCCTTGAGAACAAGA+AGG | + | Chr6:88310040-88310059 | MsG0680034480.01.T01:CDS | 40.0% | |
AATTGGAAGCCCATTTAGAC+TGG | - | Chr6:88305227-88305246 | None:intergenic | 40.0% | |
AGGCATAGAATATCCGGATT+TGG | + | Chr6:88307406-88307425 | MsG0680034480.01.T01:intron | 40.0% | |
AGGGAAATTGTGGCAAAGTT+AGG | + | Chr6:88308901-88308920 | MsG0680034480.01.T01:CDS | 40.0% | |
GAGTGTGTGACAAACCAAAT+TGG | - | Chr6:88309923-88309942 | None:intergenic | 40.0% | |
GATTCAATGTGCTCACTATG+TGG | + | Chr6:88307506-88307525 | MsG0680034480.01.T01:intron | 40.0% | |
GGTGAGCTTCTTATATGCTT+TGG | + | Chr6:88310088-88310107 | MsG0680034480.01.T01:intron | 40.0% | |
GTGAAGTGCAAAGAAGTTAC+TGG | + | Chr6:88304526-88304545 | MsG0680034480.01.T01:CDS | 40.0% | |
GTGGGGACATTATTAAAGTG+GGG | - | Chr6:88306320-88306339 | None:intergenic | 40.0% | |
TACTGAGTATTTGAGTCCGA+TGG | - | Chr6:88309064-88309083 | None:intergenic | 40.0% | |
TAGCTGAAAGGATGGTCAAA+TGG | + | Chr6:88307646-88307665 | MsG0680034480.01.T01:CDS | 40.0% | |
TATCCAACGACCGTTATTGA+TGG | + | Chr6:88308644-88308663 | MsG0680034480.01.T01:intron | 40.0% | |
TCACCTCAATCATAATCGTC+CGG | - | Chr6:88308010-88308029 | None:intergenic | 40.0% | |
TCCTTTGAGCTTTCTCTTGT+GGG | + | Chr6:88308236-88308255 | MsG0680034480.01.T01:CDS | 40.0% | |
TCTCTCTTCTTTGTCGAGAT+GGG | - | Chr6:88304607-88304626 | None:intergenic | 40.0% | |
TCTTTGAATCTCCAGATTGG+TGG | - | Chr6:88307713-88307732 | None:intergenic | 40.0% | |
! | CCGTTATTGATGGTTCACTA+TGG | + | Chr6:88308654-88308673 | MsG0680034480.01.T01:intron | 40.0% |
! | CTAGATGTTGGTTGTGGTAT+TGG | + | Chr6:88308946-88308965 | MsG0680034480.01.T01:CDS | 40.0% |
! | GAATCTTGTTTCCACCAATC+TGG | + | Chr6:88307699-88307718 | MsG0680034480.01.T01:CDS | 40.0% |
!!! | GTTTTGTTTCGGTGTTGGTT+TGG | + | Chr6:88305902-88305921 | MsG0680034480.01.T01:intron | 40.0% |
!!! | TTACCGTTTTGTTTCGGTGT+TGG | + | Chr6:88305897-88305916 | MsG0680034480.01.T01:intron | 40.0% |
ACTGAGACATGCCTAATTCG+AGG | + | Chr6:88309707-88309726 | MsG0680034480.01.T01:intron | 45.0% | |
AGAGACGGTTATGGACTTTG+AGG | - | Chr6:88306610-88306629 | None:intergenic | 45.0% | |
ATGTAGATCTGTCGCCAAAG+AGG | - | Chr6:88306226-88306245 | None:intergenic | 45.0% | |
CTCCTTTGAGCTTTCTCTTG+TGG | + | Chr6:88308235-88308254 | MsG0680034480.01.T01:CDS | 45.0% | |
CTTGGTTCCCTATAGTGAGT+TGG | - | Chr6:88307747-88307766 | None:intergenic | 45.0% | |
CTTGTGGGATGCAAATGCAT+TGG | + | Chr6:88308251-88308270 | MsG0680034480.01.T01:CDS | 45.0% | |
GAACCATCAATAACGGTCGT+TGG | - | Chr6:88308650-88308669 | None:intergenic | 45.0% | |
GCAAAGTTAGGACTAAAGCC+AGG | + | Chr6:88308913-88308932 | MsG0680034480.01.T01:CDS | 45.0% | |
GTCTCTCTTCTTTGTCGAGA+TGG | - | Chr6:88304608-88304627 | None:intergenic | 45.0% | |
TACATGTGTCAGTGTCGTGT+CGG | + | Chr6:88309648-88309667 | MsG0680034480.01.T01:intron | 45.0% | |
TATAAGTGGTTGAAGCCTGG+AGG | + | Chr6:88309291-88309310 | MsG0680034480.01.T01:CDS | 45.0% | |
TCACAGATGCTTGAGAATGC+TGG | + | Chr6:88309868-88309887 | MsG0680034480.01.T01:intron | 45.0% | |
TCCCACAAGAGAAAGCTCAA+AGG | - | Chr6:88308240-88308259 | None:intergenic | 45.0% | |
TGAAGTCCACAGCAAGCAAT+TGG | - | Chr6:88306910-88306929 | None:intergenic | 45.0% | |
TGACCGGACGATTATGATTG+AGG | + | Chr6:88308004-88308023 | MsG0680034480.01.T01:intron | 45.0% | |
TGAGGTGACGATCATGTCAA+CGG | + | Chr6:88308022-88308041 | MsG0680034480.01.T01:intron | 45.0% | |
TGTAGCTGGTGAGCAGATAT+GGG | + | Chr6:88310609-88310628 | MsG0680034480.01.T01:CDS | 45.0% | |
TTAGAGCTTGGAGCAGGTAT+TGG | + | Chr6:88306851-88306870 | MsG0680034480.01.T01:CDS | 45.0% | |
! | GATGTTGGTTGTGGTATTGG+AGG | + | Chr6:88308949-88308968 | MsG0680034480.01.T01:CDS | 45.0% |
! | TGGAGGTGGTGACTTTTACA+TGG | + | Chr6:88308966-88308985 | MsG0680034480.01.T01:CDS | 45.0% |
!!! | TCAGTTTTAGAGCTTGGAGC+AGG | + | Chr6:88306845-88306864 | MsG0680034480.01.T01:CDS | 45.0% |
!!! | AAAAAAAGTATATTTTTTAA+AGG | - | Chr6:88304749-88304768 | None:intergenic | 5.0% |
!!! | TATAATTTTATATTTGAAAT+CGG | + | Chr6:88307448-88307467 | MsG0680034480.01.T01:intron | 5.0% |
CATCATCCATCGGTGAAGGA+TGG | + | Chr6:88305705-88305724 | MsG0680034480.01.T01:intron | 50.0% | |
CATCCTTCACCGATGGATGA+TGG | - | Chr6:88305707-88305726 | None:intergenic | 50.0% | |
CCAAAACCATCCTTCACCGA+TGG | - | Chr6:88305714-88305733 | None:intergenic | 50.0% | |
CTAGCTATCGAACGTGCCAT+CGG | + | Chr6:88309045-88309064 | MsG0680034480.01.T01:CDS | 50.0% | |
CTCTTCTTTGTCGAGATGGG+AGG | - | Chr6:88304604-88304623 | None:intergenic | 50.0% | |
GAGGTGACGATCATGTCAAC+GGG | + | Chr6:88308023-88308042 | MsG0680034480.01.T01:intron | 50.0% | |
GCACGGACATTCCTCGAATT+AGG | - | Chr6:88309721-88309740 | None:intergenic | 50.0% | |
GTAGCTGGTGAGCAGATATG+GGG | + | Chr6:88310610-88310629 | MsG0680034480.01.T01:CDS | 50.0% | |
GTGTAGCTGGTGAGCAGATA+TGG | + | Chr6:88310608-88310627 | MsG0680034480.01.T01:CDS | 50.0% | |
TCTCCATCATCCATCGGTGA+AGG | + | Chr6:88305701-88305720 | MsG0680034480.01.T01:intron | 50.0% | |
TGGAAGGCTAAGCAGATGAG+AGG | + | Chr6:88310586-88310605 | MsG0680034480.01.T01:CDS | 50.0% | |
TTTGTGAGCACAGGAGGACT+TGG | + | Chr6:88308540-88308559 | MsG0680034480.01.T01:CDS | 50.0% | |
! | AAGCAGATGAGAGGTGTAGC+TGG | + | Chr6:88310595-88310614 | MsG0680034480.01.T01:CDS | 50.0% |
! | CCATCGGTGAAGGATGGTTT+TGG | + | Chr6:88305711-88305730 | MsG0680034480.01.T01:intron | 50.0% |
! | GCTGAATTGGCTCAGAAAGC+TGG | + | Chr6:88306884-88306903 | MsG0680034480.01.T01:CDS | 50.0% |
! | GTTGGTTGTGGTATTGGAGG+TGG | + | Chr6:88308952-88308971 | MsG0680034480.01.T01:CDS | 50.0% |
! | AGCTGGCCAATTGCTTGCTG+TGG | + | Chr6:88306901-88306920 | MsG0680034480.01.T01:CDS | 55.0% |
! | CAAGGCTTTGTGAGCACAGG+AGG | + | Chr6:88308534-88308553 | MsG0680034480.01.T01:CDS | 55.0% |
! | GGTCAAGGCTTTGTGAGCAC+AGG | + | Chr6:88308531-88308550 | MsG0680034480.01.T01:CDS | 55.0% |
!! | TGTCGTGTCGGTGTCGTTGT+CGG | + | Chr6:88309660-88309679 | MsG0680034480.01.T01:intron | 55.0% |
!! | GTCGGTGTCGTTGTCGGTGT+CGG | + | Chr6:88309666-88309685 | MsG0680034480.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 88304213 | 88310861 | 88304213 | ID=MsG0680034480.01;Name=MsG0680034480.01 |
Chr6 | mRNA | 88304213 | 88310861 | 88304213 | ID=MsG0680034480.01.T01;Parent=MsG0680034480.01;Name=MsG0680034480.01.T01;_AED=0.37;_eAED=0.37;_QI=70|1|1|1|0.90|0.91|12|204|497 |
Chr6 | exon | 88304213 | 88304310 | 88304213 | ID=MsG0680034480.01.T01:exon:18387;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88304511 | 88304632 | 88304511 | ID=MsG0680034480.01.T01:exon:18388;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88306812 | 88306949 | 88306812 | ID=MsG0680034480.01.T01:exon:18389;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88307245 | 88307382 | 88307245 | ID=MsG0680034480.01.T01:exon:18390;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88307636 | 88307779 | 88307636 | ID=MsG0680034480.01.T01:exon:18391;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88308197 | 88308307 | 88308197 | ID=MsG0680034480.01.T01:exon:18392;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88308420 | 88308561 | 88308420 | ID=MsG0680034480.01.T01:exon:18393;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88308893 | 88309173 | 88308893 | ID=MsG0680034480.01.T01:exon:18394;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88309264 | 88309425 | 88309264 | ID=MsG0680034480.01.T01:exon:18395;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88309874 | 88309927 | 88309874 | ID=MsG0680034480.01.T01:exon:18396;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88310014 | 88310088 | 88310014 | ID=MsG0680034480.01.T01:exon:18397;Parent=MsG0680034480.01.T01 |
Chr6 | exon | 88310559 | 88310861 | 88310559 | ID=MsG0680034480.01.T01:exon:18398;Parent=MsG0680034480.01.T01 |
Chr6 | five_prime_UTR | 88304213 | 88304282 | 88304213 | ID=MsG0680034480.01.T01:five_prime_utr;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88304283 | 88304310 | 88304283 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88304511 | 88304632 | 88304511 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88306812 | 88306949 | 88306812 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88307245 | 88307382 | 88307245 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88307636 | 88307779 | 88307636 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88308197 | 88308307 | 88308197 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88308420 | 88308561 | 88308420 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88308893 | 88309173 | 88308893 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88309264 | 88309425 | 88309264 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88309874 | 88309927 | 88309874 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88310014 | 88310088 | 88310014 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | CDS | 88310559 | 88310657 | 88310559 | ID=MsG0680034480.01.T01:cds;Parent=MsG0680034480.01.T01 |
Chr6 | three_prime_UTR | 88310658 | 88310861 | 88310658 | ID=MsG0680034480.01.T01:three_prime_utr;Parent=MsG0680034480.01.T01 |
Gene Sequence |
Protein sequence |