AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023166.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023166.01.T01 MTR_8g088420 97.619 336 7 1 1 336 1 335 0.0 671
MsG0480023166.01.T01 MTR_8g088420 96.726 336 7 2 1 336 1 332 0.0 660
MsG0480023166.01.T01 MTR_7g108590 41.860 86 50 0 224 309 75 160 1.28e-11 65.5
MsG0480023166.01.T01 MTR_7g108590 41.860 86 50 0 224 309 75 160 1.35e-11 65.5
MsG0480023166.01.T01 MTR_7g108590 41.860 86 50 0 224 309 75 160 1.37e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023166.01.T01 AT1G55480 69.255 322 88 5 21 336 19 335 1.23e-146 417
MsG0480023166.01.T01 AT1G02910 39.535 86 52 0 224 309 82 167 2.40e-11 64.7
MsG0480023166.01.T01 AT1G02910 39.535 86 52 0 224 309 82 167 3.00e-11 64.7

Find 75 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGAAGAAGCTCTGAATTC+TGG 0.228235 4:+81670988 MsG0480023166.01.T01:CDS
TTCAATAATGGATCGAATTC+CGG 0.233768 4:-81671147 None:intergenic
AATGCCATCAAATCAATATT+TGG 0.237285 4:+81671207 MsG0480023166.01.T01:CDS
TATTCCAAATATTGATTTGA+TGG 0.245252 4:-81671211 None:intergenic
TATGGAATCAAATTTGTAAA+AGG 0.254004 4:+81667253 MsG0480023166.01.T01:CDS
AGAGAAATTTGAGTCTGTTC+TGG 0.274480 4:+81669216 MsG0480023166.01.T01:CDS
ATTTGGCCAGCTGCAGAATA+TGG 0.304170 4:+81668181 MsG0480023166.01.T01:CDS
TCAATAATGGATCGAATTCC+GGG 0.313549 4:-81671146 None:intergenic
TGAGTAACGGTCCAATTCTT+TGG 0.315025 4:-81668225 None:intergenic
ACCTCTCATCTTCTTCTTTG+TGG 0.326142 4:+81666859 MsG0480023166.01.T01:five_prime_UTR
ACTGCTGCTTCATCAGGTTC+TGG 0.337193 4:-81669247 None:intergenic
ATCCTGACCTTGCTAACTTA+AGG 0.358663 4:+81671118 MsG0480023166.01.T01:CDS
ACTGATACTAATATTATTGT+TGG 0.360066 4:-81671471 None:intergenic
ATGAAGCTTTAACCACAAAA+AGG 0.369840 4:-81667135 None:intergenic
TACACAATTCGCCAAAGAAT+TGG 0.370489 4:+81668214 MsG0480023166.01.T01:CDS
TATTGATTTGATGGCATTGA+TGG 0.383403 4:-81671202 None:intergenic
CTTGCGACTGCTGCTTCATC+AGG 0.385633 4:-81669253 None:intergenic
GTAGAGATTGATCAGCCTTA+TGG 0.398067 4:+81667235 MsG0480023166.01.T01:CDS
GAGAAGGCTTATTACTATAC+AGG 0.400934 4:+81668662 MsG0480023166.01.T01:CDS
TTTACAAATTTGATTCCATA+AGG 0.407340 4:-81667250 None:intergenic
CTTTCTTGTGTCCATACAAA+GGG 0.415256 4:-81671271 None:intergenic
GAGAAATTTGAGTCTGTTCT+GGG 0.421833 4:+81669217 MsG0480023166.01.T01:CDS
TCCTGACCTTGCTAACTTAA+GGG 0.425185 4:+81671119 MsG0480023166.01.T01:CDS
AATTCAGGAAAGATAGAAAC+TGG 0.428336 4:+81668378 MsG0480023166.01.T01:intron
GTCCTTCCATATTCTGCAGC+TGG 0.428621 4:-81668187 None:intergenic
CTCATAGAATAGAATTCAAA+AGG 0.454769 4:+81666913 MsG0480023166.01.T01:five_prime_UTR
GTTAAAGCTTCATCTGATGT+TGG 0.460277 4:+81667145 MsG0480023166.01.T01:CDS
TTGATTTGGGTGGTTCTTGT+TGG 0.460843 4:-81667019 None:intergenic
AAAGGGTGTTGGAAAATGAA+TGG 0.463371 4:-81667099 None:intergenic
TGGTGGTGATTTAACTGAAA+AGG 0.465918 4:+81668398 MsG0480023166.01.T01:CDS
TCTACCTCATACTCTTCATA+TGG 0.466016 4:-81667217 None:intergenic
ATGAGAATGCAGAAGAGATA+TGG 0.467750 4:+81668247 MsG0480023166.01.T01:CDS
ACCTGGTGGATCAGCTGATA+AGG 0.468201 4:+81667309 MsG0480023166.01.T01:CDS
GCCCTTAAGTTAGCAAGGTC+AGG 0.473310 4:-81671120 None:intergenic
AAAAGAAGTGAAAGAGGGTC+GGG 0.478878 4:+81668627 MsG0480023166.01.T01:CDS
TGAAGAAAACAACTTGGTGG+TGG 0.480727 4:-81667071 None:intergenic
CTGAAGGAATGCTAAATATG+AGG 0.486992 4:+81669186 MsG0480023166.01.T01:intron
TTAAAGCTTCATCTGATGTT+GGG 0.489304 4:+81667146 MsG0480023166.01.T01:CDS
GCTTTCTTGTGTCCATACAA+AGG 0.493676 4:-81671272 None:intergenic
TCCAAAGAAGAGAGTGAAAA+GGG 0.495005 4:+81667178 MsG0480023166.01.T01:CDS
GTGTAGTCAGTAACAAATTG+AGG 0.501089 4:+81668448 MsG0480023166.01.T01:CDS
TGCTAACTTAAGGGCATCCC+CGG 0.505200 4:+81671128 MsG0480023166.01.T01:CDS
AGAGCCATATGAAGAGTATG+AGG 0.513381 4:+81667213 MsG0480023166.01.T01:CDS
ATCCAAAGAAGAGAGTGAAA+AGG 0.523109 4:+81667177 MsG0480023166.01.T01:CDS
TTCAGATGCAAAACTACCTA+AGG 0.524675 4:+81668602 MsG0480023166.01.T01:intron
CGGGAAAATGATTTGAGAGA+AGG 0.524777 4:+81668646 MsG0480023166.01.T01:CDS
AAGGCTGGTGTCTTCACTGT+TGG 0.533258 4:+81667328 MsG0480023166.01.T01:CDS
GTTATGTTATGCTCAAAACT+TGG 0.539279 4:-81666941 None:intergenic
GAAGAAAACAACTTGGTGGT+GGG 0.541745 4:-81667070 None:intergenic
GCCTTATCAGCTGATCCACC+AGG 0.542146 4:-81667310 None:intergenic
TGTAGTCAGTAACAAATTGA+GGG 0.542149 4:+81668449 MsG0480023166.01.T01:CDS
GAAGAGAGTGAAAAGGGTGA+AGG 0.542694 4:+81667184 MsG0480023166.01.T01:CDS
ATTAGAGCTGAGAGGAACTC+TGG 0.547874 4:+81668426 MsG0480023166.01.T01:CDS
GTGATAAAGTACTTGCCACT+AGG 0.547929 4:+81667350 MsG0480023166.01.T01:CDS
TTGTGGTAAGCTATGCTCAA+AGG 0.554500 4:+81666876 MsG0480023166.01.T01:five_prime_UTR
TTGCTTAGAGTTGATTTGGG+TGG 0.560266 4:-81667029 None:intergenic
CACGGAGAAATCAAATGTGG+TGG 0.571593 4:-81671337 None:intergenic
TACATTGATGCTATTGCACC+TGG 0.576493 4:+81667292 MsG0480023166.01.T01:CDS
AGAGTAGTGACCACTGGTCG+TGG 0.578837 4:-81666984 None:intergenic
TTCTGCATTCTCATGAGTAA+CGG 0.581312 4:-81668238 None:intergenic
GGTGGATCAGCTGATAAGGC+TGG 0.589206 4:+81667313 MsG0480023166.01.T01:CDS
TTTGTAAAAGGAAGAGATGG+TGG 0.593264 4:+81667265 MsG0480023166.01.T01:CDS
AAATTTGTAAAAGGAAGAGA+TGG 0.594574 4:+81667262 MsG0480023166.01.T01:CDS
GGCCAGCTGCAGAATATGGA+AGG 0.601298 4:+81668185 MsG0480023166.01.T01:CDS
TTGTTACTCTAAGCTAAACC+AGG 0.621899 4:+81669291 MsG0480023166.01.T01:CDS
AAGTGCAGAGTAGTGACCAC+TGG 0.628468 4:-81666990 None:intergenic
GGGATGCCCTTAAGTTAGCA+AGG 0.635366 4:-81671125 None:intergenic
ATTGATGCTATTGCACCTGG+TGG 0.648922 4:+81667295 MsG0480023166.01.T01:CDS
TCTATGTCTACCACGACCAG+TGG 0.656408 4:+81666974 MsG0480023166.01.T01:CDS
ACCACAAAGAAGAAGATGAG+AGG 0.665152 4:-81666860 None:intergenic
CAATAATGGATCGAATTCCG+GGG 0.672051 4:-81671145 None:intergenic
AGGAGATCATTAGAGCTGAG+AGG 0.676541 4:+81668418 MsG0480023166.01.T01:CDS
ATACACGGAGAAATCAAATG+TGG 0.688691 4:-81671340 None:intergenic
TCAGGAAAGATAGAAACTGG+TGG 0.695306 4:+81668381 MsG0480023166.01.T01:intron
GGTAGACATAGATAATGACA+TGG 0.735400 4:-81666963 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAATATCTTATAAAAA+AGG - Chr4:81668535-81668554 None:intergenic 10.0%
!!! ATATTTTTGTAGTTAAATAT+AGG + Chr4:81671361-81671380 MsG0480023166.01.T01:three_prime_UTR 10.0%
!! ATACATACAAAAAATCATAA+GGG + Chr4:81668903-81668922 MsG0480023166.01.T01:intron 15.0%
!! TATACATACAAAAAATCATA+AGG + Chr4:81668902-81668921 MsG0480023166.01.T01:intron 15.0%
!! TTAAGATTAAGATGAAAATA+GGG + Chr4:81669560-81669579 MsG0480023166.01.T01:intron 15.0%
!! TTTAACTACAAAAATATACA+CGG - Chr4:81671358-81671377 None:intergenic 15.0%
!!! GGTTTTTTTTTTCTAATAAT+GGG - Chr4:81671253-81671272 None:intergenic 15.0%
!!! GTTTTTTTTTTCTAATAATG+GGG - Chr4:81671252-81671271 None:intergenic 15.0%
!!! TTTTTAGAGAATTATATAGA+TGG + Chr4:81667429-81667448 MsG0480023166.01.T01:intron 15.0%
!! ATTAAACAAACAAATTGAGT+TGG + Chr4:81670887-81670906 MsG0480023166.01.T01:intron 20.0%
!! CAAATGTTAAAAGGAAAAAT+GGG - Chr4:81670837-81670856 None:intergenic 20.0%
!! GTTAAGATTAAGATGAAAAT+AGG + Chr4:81669559-81669578 MsG0480023166.01.T01:intron 20.0%
!! TAAAGTAAGGAATAAAGTAT+TGG + Chr4:81668972-81668991 MsG0480023166.01.T01:intron 20.0%
!! TAAGATTAAGATGAAAATAG+GGG + Chr4:81669561-81669580 MsG0480023166.01.T01:intron 20.0%
!! TATGGAATCAAATTTGTAAA+AGG + Chr4:81667253-81667272 MsG0480023166.01.T01:CDS 20.0%
!! TCAAATGTTAAAAGGAAAAA+TGG - Chr4:81670838-81670857 None:intergenic 20.0%
!! TGATATTGCATTAAAACTAT+CGG + Chr4:81667805-81667824 MsG0480023166.01.T01:intron 20.0%
!! TTGGAATATAGTTTCTTAAA+TGG - Chr4:81669693-81669712 None:intergenic 20.0%
!! TTTACAAATTTGATTCCATA+AGG - Chr4:81667253-81667272 None:intergenic 20.0%
!!! ACTTTATTAGCATATTGATT+AGG - Chr4:81670929-81670948 None:intergenic 20.0%
!!! ATGTAATTAAAGCATCATTT+AGG + Chr4:81670728-81670747 MsG0480023166.01.T01:intron 20.0%
!!! ATTTTTTGACAGAAAGTTAT+TGG - Chr4:81669464-81669483 None:intergenic 20.0%
!!! CTAATAAGTTTTATATTGTG+TGG + Chr4:81670519-81670538 MsG0480023166.01.T01:intron 20.0%
!!! GGGTTTTTTTTTTCTAATAA+TGG - Chr4:81671254-81671273 None:intergenic 20.0%
!!! TATATATTTTGACATTAGAG+CGG + Chr4:81670699-81670718 MsG0480023166.01.T01:intron 20.0%
!!! TATTCCAAATATTGATTTGA+TGG - Chr4:81671214-81671233 None:intergenic 20.0%
!!! TCATCAAATCTTTTCAATAA+TGG - Chr4:81671162-81671181 None:intergenic 20.0%
!!! TCTTTGATCAATAATTTTTG+AGG + Chr4:81668106-81668125 MsG0480023166.01.T01:intron 20.0%
!!! TGTAATTAAAGCATCATTTA+GGG + Chr4:81670729-81670748 MsG0480023166.01.T01:intron 20.0%
!!! TTTTCTTTCTGTCTTTATTT+CGG + Chr4:81668710-81668729 MsG0480023166.01.T01:intron 20.0%
! AAAGTCATACATATTCAATG+AGG - Chr4:81667840-81667859 None:intergenic 25.0%
! AAATTGGACAAAAATATACC+TGG - Chr4:81669312-81669331 None:intergenic 25.0%
! AAATTGGTGTAATTGATTGA+TGG + Chr4:81670787-81670806 MsG0480023166.01.T01:intron 25.0%
! AAATTTGTAAAAGGAAGAGA+TGG + Chr4:81667262-81667281 MsG0480023166.01.T01:CDS 25.0%
! AATATGAACCCAAAAAATGA+TGG - Chr4:81670367-81670386 None:intergenic 25.0%
! AATATGAACTCAAAAACTGA+TGG - Chr4:81670440-81670459 None:intergenic 25.0%
! AATGCCATCAAATCAATATT+TGG + Chr4:81671207-81671226 MsG0480023166.01.T01:CDS 25.0%
! ACAAGTTTGAGAAATGAAAA+TGG - Chr4:81668576-81668595 None:intergenic 25.0%
! ACCAATACTCAAATGTTAAA+AGG - Chr4:81670846-81670865 None:intergenic 25.0%
! AGAGCAAATTAAATTGTGTA+TGG + Chr4:81669511-81669530 MsG0480023166.01.T01:intron 25.0%
! AGCACATATAATCTGTAAAT+TGG - Chr4:81669328-81669347 None:intergenic 25.0%
! ATCAATAAAGTGTGCAATAA+TGG - Chr4:81668862-81668881 None:intergenic 25.0%
! ATTATTGCACACTTTATTGA+TGG + Chr4:81668861-81668880 MsG0480023166.01.T01:intron 25.0%
! CACCTCATTTAATATACATA+AGG - Chr4:81668030-81668049 None:intergenic 25.0%
! CTCATAGAATAGAATTCAAA+AGG + Chr4:81666913-81666932 MsG0480023166.01.T01:five_prime_UTR 25.0%
! GAAAAAAAAAACCCTTTGTA+TGG + Chr4:81671260-81671279 MsG0480023166.01.T01:three_prime_UTR 25.0%
! GAATTATATAGATGGTTGTT+TGG + Chr4:81667437-81667456 MsG0480023166.01.T01:intron 25.0%
! GAGCAAATTAAATTGTGTAT+GGG + Chr4:81669512-81669531 MsG0480023166.01.T01:intron 25.0%
! GATATTGCATTAAAACTATC+GGG + Chr4:81667806-81667825 MsG0480023166.01.T01:intron 25.0%
! GCTATTACTATTCTATCATA+TGG - Chr4:81667977-81667996 None:intergenic 25.0%
! GTTCAAGATAGTTATTTGAA+GGG + Chr4:81667491-81667510 MsG0480023166.01.T01:intron 25.0%
! TACATACTTATGAGACTTTA+TGG + Chr4:81667561-81667580 MsG0480023166.01.T01:intron 25.0%
! TAGTCACTCACATATATAAA+AGG - Chr4:81669434-81669453 None:intergenic 25.0%
! TGCCTTATGTATATTAAATG+AGG + Chr4:81668025-81668044 MsG0480023166.01.T01:intron 25.0%
! TGTTCAAGATAGTTATTTGA+AGG + Chr4:81667490-81667509 MsG0480023166.01.T01:intron 25.0%
! TTACATTAAAAATCTGCTGA+TGG + Chr4:81667908-81667927 MsG0480023166.01.T01:intron 25.0%
!! AGAAGTTGAACATTTTCATT+CGG - Chr4:81668138-81668157 None:intergenic 25.0%
!! ATAACTTGTCAAAAGTAGTT+GGG + Chr4:81669652-81669671 MsG0480023166.01.T01:intron 25.0%
!! GTAATTAAAGCATCATTTAG+GGG + Chr4:81670730-81670749 MsG0480023166.01.T01:intron 25.0%
!! TATAACTTGTCAAAAGTAGT+TGG + Chr4:81669651-81669670 MsG0480023166.01.T01:intron 25.0%
!! TCCTTTTAACATTTGAGTAT+TGG + Chr4:81670842-81670861 MsG0480023166.01.T01:intron 25.0%
!! TCTAATAAGTTTTGCATAAG+AGG + Chr4:81670667-81670686 MsG0480023166.01.T01:intron 25.0%
!!! ACTATTTTGATAAGCTATCA+TGG - Chr4:81667640-81667659 None:intergenic 25.0%
!!! ATTTTTGTCATTTGTTGGAT+TGG + Chr4:81671390-81671409 MsG0480023166.01.T01:three_prime_UTR 25.0%
!!! GTTTTTTGAAGAAAACAACT+TGG - Chr4:81667080-81667099 None:intergenic 25.0%
!!! TATGTAAACAGACCTTTTTT+GGG + Chr4:81667755-81667774 MsG0480023166.01.T01:intron 25.0%
!!! TTATGTAAACAGACCTTTTT+TGG + Chr4:81667754-81667773 MsG0480023166.01.T01:intron 25.0%
!!! TTGATTGATGGTTGTTTTAA+TGG + Chr4:81670799-81670818 MsG0480023166.01.T01:intron 25.0%
!!! TTTTGAGTTCATATTTGTAG+AGG + Chr4:81670445-81670464 MsG0480023166.01.T01:intron 25.0%
AAGGAAAAAAGAAGTGAAAG+AGG + Chr4:81668621-81668640 MsG0480023166.01.T01:CDS 30.0%
AATAAGCAGTGGAGTAATAA+AGG - Chr4:81668953-81668972 None:intergenic 30.0%
AATTCAGGAAAGATAGAAAC+TGG + Chr4:81668378-81668397 MsG0480023166.01.T01:intron 30.0%
ACTTCCATTATGAAATGTCA+AGG - Chr4:81668773-81668792 None:intergenic 30.0%
AGGAAAAAAGAAGTGAAAGA+GGG + Chr4:81668622-81668641 MsG0480023166.01.T01:CDS 30.0%
ATATATGTGAGTGACTAACT+TGG + Chr4:81669437-81669456 MsG0480023166.01.T01:intron 30.0%
CCAAAAAATGATGGTTCAAT+GGG - Chr4:81670275-81670294 None:intergenic 30.0%
CTTCCATTATGAAATGTCAA+GGG - Chr4:81668772-81668791 None:intergenic 30.0%
GTTATGTTATGCTCAAAACT+TGG - Chr4:81666944-81666963 None:intergenic 30.0%
TAAATGGTGTAGCATTAAGT+TGG - Chr4:81669712-81669731 None:intergenic 30.0%
TAGAATAGTAATAGCATCCT+AGG + Chr4:81667982-81668001 MsG0480023166.01.T01:intron 30.0%
TGATTAGGTAAATGAATGAC+AGG - Chr4:81670914-81670933 None:intergenic 30.0%
TGGTGGGAAAAAAATAAGTT+GGG - Chr4:81667057-81667076 None:intergenic 30.0%
TGTAGTCAGTAACAAATTGA+GGG + Chr4:81668449-81668468 MsG0480023166.01.T01:CDS 30.0%
TTAAAGCTTCATCTGATGTT+GGG + Chr4:81667146-81667165 MsG0480023166.01.T01:CDS 30.0%
TTATTTGTGAACTTAGCTCA+CGG + Chr4:81668335-81668354 MsG0480023166.01.T01:intron 30.0%
TTCCATATTCTAACCAATGT+GGG - Chr4:81669783-81669802 None:intergenic 30.0%
TTCCTTACTTTAATAAGCAG+TGG - Chr4:81668964-81668983 None:intergenic 30.0%
TTTCCCTTGACATTTCATAA+TGG + Chr4:81668766-81668785 MsG0480023166.01.T01:intron 30.0%
! ATGAAGCTTTAACCACAAAA+AGG - Chr4:81667138-81667157 None:intergenic 30.0%
! TAAATCAGCCACAATGTTTT+TGG + Chr4:81669618-81669637 MsG0480023166.01.T01:intron 30.0%
! TAACTTGTCAAAAGTAGTTG+GGG + Chr4:81669653-81669672 MsG0480023166.01.T01:intron 30.0%
! TAATACTTCGAGATTAGTCA+AGG + Chr4:81667859-81667878 MsG0480023166.01.T01:intron 30.0%
!! AATTTAATTTGCTCTGCTGT+AGG - Chr4:81669506-81669525 None:intergenic 30.0%
!! ACAGATTAGCAGTTTTAACA+TGG - Chr4:81668493-81668512 None:intergenic 30.0%
!! CGAAGCATCTATTTTAGATT+AGG + Chr4:81669100-81669119 MsG0480023166.01.T01:intron 30.0%
!! CTCTCATTTTTGTCATTTGT+TGG + Chr4:81671385-81671404 MsG0480023166.01.T01:three_prime_UTR 30.0%
!! GTTTTGCTTAGAGTTGATTT+GGG - Chr4:81667035-81667054 None:intergenic 30.0%
!! TATTGATTTGATGGCATTGA+TGG - Chr4:81671205-81671224 None:intergenic 30.0%
!! TTCAATAATGGATCGAATTC+CGG - Chr4:81671150-81671169 None:intergenic 30.0%
!! TTTTGAAGAAAACAACTTGG+TGG - Chr4:81667077-81667096 None:intergenic 30.0%
!!! AAGATATTTTTTCTCCCATG+TGG + Chr4:81668542-81668561 MsG0480023166.01.T01:intron 30.0%
!!! AGATATTTTTTCTCCCATGT+GGG + Chr4:81668543-81668562 MsG0480023166.01.T01:intron 30.0%
!!! CATCACTACCATCATTTTTT+GGG + Chr4:81670394-81670413 MsG0480023166.01.T01:intron 30.0%
!!! CCATTGAACCATCATTTTTT+GGG + Chr4:81670273-81670292 MsG0480023166.01.T01:intron 30.0%
!!! CTTTCACTTCTTTTTTCCTT+AGG - Chr4:81668621-81668640 None:intergenic 30.0%
!!! GCTTTTTTCTCTCTCAAAAT+AGG - Chr4:81669072-81669091 None:intergenic 30.0%
!!! TTTTTTGGGTTCATATTGTG+TGG + Chr4:81670370-81670389 MsG0480023166.01.T01:intron 30.0%
AAAAAGAAGTGAAAGAGGGT+CGG + Chr4:81668626-81668645 MsG0480023166.01.T01:CDS 35.0%
AAAGGTTGAGCTTATGATTG+TGG + Chr4:81667778-81667797 MsG0480023166.01.T01:intron 35.0%
AACTTAATGCTACACCATCT+TGG + Chr4:81669746-81669765 MsG0480023166.01.T01:intron 35.0%
AAGATGGTGTAGCATTAAGT+TGG - Chr4:81669747-81669766 None:intergenic 35.0%
ACCGTAAACCAAAAACATTG+TGG - Chr4:81669629-81669648 None:intergenic 35.0%
AGAGAAATTTGAGTCTGTTC+TGG + Chr4:81669216-81669235 MsG0480023166.01.T01:CDS 35.0%
ATACACGGAGAAATCAAATG+TGG - Chr4:81671343-81671362 None:intergenic 35.0%
ATCCAAAGAAGAGAGTGAAA+AGG + Chr4:81667177-81667196 MsG0480023166.01.T01:CDS 35.0%
ATGAGAATGCAGAAGAGATA+TGG + Chr4:81668247-81668266 MsG0480023166.01.T01:CDS 35.0%
CACTGTTACCCAAAAAATGA+TGG - Chr4:81670284-81670303 None:intergenic 35.0%
CCCAAAAAATGATGGTTCAA+TGG - Chr4:81670276-81670295 None:intergenic 35.0%
CTCCACTGCTTATTAAAGTA+AGG + Chr4:81668959-81668978 MsG0480023166.01.T01:intron 35.0%
CTGAAGGAATGCTAAATATG+AGG + Chr4:81669186-81669205 MsG0480023166.01.T01:intron 35.0%
CTTGTCAGACATTATAGACA+TGG + Chr4:81669005-81669024 MsG0480023166.01.T01:intron 35.0%
CTTTCTTGTGTCCATACAAA+GGG - Chr4:81671274-81671293 None:intergenic 35.0%
GAGAAATTTGAGTCTGTTCT+GGG + Chr4:81669217-81669236 MsG0480023166.01.T01:CDS 35.0%
GAGAAGGCTTATTACTATAC+AGG + Chr4:81668662-81668681 MsG0480023166.01.T01:CDS 35.0%
GCTTTAACCACAAAAAGGAA+CGG - Chr4:81667133-81667152 None:intergenic 35.0%
GGTAGACATAGATAATGACA+TGG - Chr4:81666966-81666985 None:intergenic 35.0%
GTCAAGGGAAAGAAAAATGA+AGG - Chr4:81668757-81668776 None:intergenic 35.0%
GTGTAGTCAGTAACAAATTG+AGG + Chr4:81668448-81668467 MsG0480023166.01.T01:CDS 35.0%
GTTAAAACAGCAACAGTGTT+AGG - Chr4:81671083-81671102 None:intergenic 35.0%
GTTAAAGCTTCATCTGATGT+TGG + Chr4:81667145-81667164 MsG0480023166.01.T01:CDS 35.0%
GTTCCATATTCTAACCAATG+TGG - Chr4:81669784-81669803 None:intergenic 35.0%
TACACAATTCGCCAAAGAAT+TGG + Chr4:81668214-81668233 MsG0480023166.01.T01:CDS 35.0%
TCCAAAGAAGAGAGTGAAAA+GGG + Chr4:81667178-81667197 MsG0480023166.01.T01:CDS 35.0%
TCTACCTCATACTCTTCATA+TGG - Chr4:81667220-81667239 None:intergenic 35.0%
TCTATTCAGCAAGCTATACA+AGG - Chr4:81669405-81669424 None:intergenic 35.0%
TGAACCATGGTTATCAATTC+AGG + Chr4:81668363-81668382 MsG0480023166.01.T01:intron 35.0%
TGTATGTCATGTCAGACTAT+CGG - Chr4:81667541-81667560 None:intergenic 35.0%
TTCAGATGCAAAACTACCTA+AGG + Chr4:81668602-81668621 MsG0480023166.01.T01:intron 35.0%
TTCTGCATTCTCATGAGTAA+CGG - Chr4:81668241-81668260 None:intergenic 35.0%
TTGTTACTCTAAGCTAAACC+AGG + Chr4:81669291-81669310 MsG0480023166.01.T01:CDS 35.0%
TTTGTAAAAGGAAGAGATGG+TGG + Chr4:81667265-81667284 MsG0480023166.01.T01:CDS 35.0%
! AAAACGATTTTCTGAGTCAC+TGG - Chr4:81668694-81668713 None:intergenic 35.0%
! AACTCAAAAACTGATGGTGA+TGG - Chr4:81670434-81670453 None:intergenic 35.0%
! AAGTTTTGCATAAGAGGTGA+GGG + Chr4:81670673-81670692 MsG0480023166.01.T01:intron 35.0%
! ATTAAAGCATCATTTAGGGG+AGG + Chr4:81670733-81670752 MsG0480023166.01.T01:intron 35.0%
! CCAAAAAATGATGGTAGTGA+TGG - Chr4:81670396-81670415 None:intergenic 35.0%
! CTTTCCTGAATTGATAACCA+TGG - Chr4:81668370-81668389 None:intergenic 35.0%
! GAATTGATAACCATGGTTCA+TGG - Chr4:81668363-81668382 None:intergenic 35.0%
! GTGGTGGGAAAAAAATAAGT+TGG - Chr4:81667058-81667077 None:intergenic 35.0%
! TAAGTTTTGCATAAGAGGTG+AGG + Chr4:81670672-81670691 MsG0480023166.01.T01:intron 35.0%
! TGGTGGTGATTTAACTGAAA+AGG + Chr4:81668398-81668417 MsG0480023166.01.T01:CDS 35.0%
! TTAAAGCATCATTTAGGGGA+GGG + Chr4:81670734-81670753 MsG0480023166.01.T01:intron 35.0%
!! AAAGGAACGGTTTTGACAAA+AGG - Chr4:81667120-81667139 None:intergenic 35.0%
!! AAAGGGTGTTGGAAAATGAA+TGG - Chr4:81667102-81667121 None:intergenic 35.0%
!! AAGGAACGGTTTTGACAAAA+GGG - Chr4:81667119-81667138 None:intergenic 35.0%
!! ATTTTGACATTAGAGCGGAA+GGG + Chr4:81670704-81670723 MsG0480023166.01.T01:intron 35.0%
!! GGTTTTGCTTAGAGTTGATT+TGG - Chr4:81667036-81667055 None:intergenic 35.0%
!! TCAATAATGGATCGAATTCC+GGG - Chr4:81671149-81671168 None:intergenic 35.0%
!!! AAACAGACCTTTTTTGGGAA+AGG + Chr4:81667760-81667779 MsG0480023166.01.T01:intron 35.0%
!!! ATTTTTTGGGTAACAGTGGA+GGG + Chr4:81670286-81670305 MsG0480023166.01.T01:intron 35.0%
!!! CATCATTTTTTGGGTAACAG+TGG + Chr4:81670282-81670301 MsG0480023166.01.T01:intron 35.0%
!!! CCATCACTACCATCATTTTT+TGG + Chr4:81670393-81670412 MsG0480023166.01.T01:intron 35.0%
!!! CCCATTGAACCATCATTTTT+TGG + Chr4:81670272-81670291 MsG0480023166.01.T01:intron 35.0%
!!! CTGTTTTTGGGACTGAAATT+TGG + Chr4:81668164-81668183 MsG0480023166.01.T01:CDS 35.0%
!!! GATATTTTTTCTCCCATGTG+GGG + Chr4:81668544-81668563 MsG0480023166.01.T01:intron 35.0%
!!! GCAAACATTTTAGCTGACTA+AGG + Chr4:81671293-81671312 MsG0480023166.01.T01:three_prime_UTR 35.0%
!!! GCCACAATGTTTTTGGTTTA+CGG + Chr4:81669625-81669644 MsG0480023166.01.T01:intron 35.0%
!!! TATTTTGACATTAGAGCGGA+AGG + Chr4:81670703-81670722 MsG0480023166.01.T01:intron 35.0%
!!! TTCTGGTTTTGAAGACTTCA+AGG + Chr4:81671005-81671024 MsG0480023166.01.T01:CDS 35.0%
AAAAGAAGTGAAAGAGGGTC+GGG + Chr4:81668627-81668646 MsG0480023166.01.T01:CDS 40.0%
AAAATGGTTGTAACCCCACA+TGG - Chr4:81668560-81668579 None:intergenic 40.0%
AAATGGTTGTAACCCCACAT+GGG - Chr4:81668559-81668578 None:intergenic 40.0%
ACCACAAAGAAGAAGATGAG+AGG - Chr4:81666863-81666882 None:intergenic 40.0%
ACCTCTCATCTTCTTCTTTG+TGG + Chr4:81666859-81666878 MsG0480023166.01.T01:five_prime_UTR 40.0%
AGCTCAACCTTTCCCAAAAA+AGG - Chr4:81667770-81667789 None:intergenic 40.0%
AGTGAACGGTAAGGATATCA+GGG - Chr4:81669148-81669167 None:intergenic 40.0%
AGTTCATATTTGTAGAGGCG+AGG + Chr4:81670450-81670469 MsG0480023166.01.T01:intron 40.0%
ATCCTGACCTTGCTAACTTA+AGG + Chr4:81671118-81671137 MsG0480023166.01.T01:CDS 40.0%
CGGGAAAATGATTTGAGAGA+AGG + Chr4:81668646-81668665 MsG0480023166.01.T01:CDS 40.0%
GAATCCAGGAAAAGAGTGAA+CGG - Chr4:81669162-81669181 None:intergenic 40.0%
GCAATTGAAGCTTCTTTCAG+AGG + Chr4:81670478-81670497 MsG0480023166.01.T01:intron 40.0%
GCTTTCTTGTGTCCATACAA+AGG - Chr4:81671275-81671294 None:intergenic 40.0%
GGATTCATTATGTCCCACAT+TGG + Chr4:81669767-81669786 MsG0480023166.01.T01:intron 40.0%
GGGACATAATGAATCCAAGA+TGG - Chr4:81669763-81669782 None:intergenic 40.0%
GTAGAGATTGATCAGCCTTA+TGG + Chr4:81667235-81667254 MsG0480023166.01.T01:CDS 40.0%
GTTCATATTTGTAGAGGCGA+GGG + Chr4:81670451-81670470 MsG0480023166.01.T01:intron 40.0%
TACATTGATGCTATTGCACC+TGG + Chr4:81667292-81667311 MsG0480023166.01.T01:CDS 40.0%
TCAGGAAAGATAGAAACTGG+TGG + Chr4:81668381-81668400 MsG0480023166.01.T01:intron 40.0%
TCCTGACCTTGCTAACTTAA+GGG + Chr4:81671119-81671138 MsG0480023166.01.T01:CDS 40.0%
TCTTGACAATACAGAGACCT+AGG - Chr4:81668002-81668021 None:intergenic 40.0%
TGAGTAACGGTCCAATTCTT+TGG - Chr4:81668228-81668247 None:intergenic 40.0%
TGGAACAAGTATGTGTATGC+TGG + Chr4:81669798-81669817 MsG0480023166.01.T01:intron 40.0%
TTGTGGTAAGCTATGCTCAA+AGG + Chr4:81666876-81666895 MsG0480023166.01.T01:five_prime_UTR 40.0%
TTTCCTGGATTCAATGCTGA+AGG + Chr4:81669170-81669189 MsG0480023166.01.T01:intron 40.0%
! AAGAGCACAAACAAACCTAG+TGG - Chr4:81667368-81667387 None:intergenic 40.0%
! ACCCTTTTCACTCTCTTCTT+TGG - Chr4:81667182-81667201 None:intergenic 40.0%
! ACTTCGAGATTAGTCAAGGT+TGG + Chr4:81667863-81667882 MsG0480023166.01.T01:intron 40.0%
! AGAGCCATATGAAGAGTATG+AGG + Chr4:81667213-81667232 MsG0480023166.01.T01:CDS 40.0%
! ATTCCTTCAGCATTGAATCC+AGG - Chr4:81669176-81669195 None:intergenic 40.0%
! CTGTGTAGATTTTGCTGAAG+TGG - Chr4:81666838-81666857 None:intergenic 40.0%
! GAAGAAAACAACTTGGTGGT+GGG - Chr4:81667073-81667092 None:intergenic 40.0%
! GTCAAAACCGTTCCTTTTTG+TGG + Chr4:81667123-81667142 MsG0480023166.01.T01:CDS 40.0%
! GTCCCACATTGGTTAGAATA+TGG + Chr4:81669778-81669797 MsG0480023166.01.T01:intron 40.0%
! GTGATAAAGTACTTGCCACT+AGG + Chr4:81667350-81667369 MsG0480023166.01.T01:CDS 40.0%
! TAAAGCATCATTTAGGGGAG+GGG + Chr4:81670735-81670754 MsG0480023166.01.T01:intron 40.0%
! TGAAGAAAACAACTTGGTGG+TGG - Chr4:81667074-81667093 None:intergenic 40.0%
! TTTTGACATTAGAGCGGAAG+GGG + Chr4:81670705-81670724 MsG0480023166.01.T01:intron 40.0%
!! CAATAATGGATCGAATTCCG+GGG - Chr4:81671148-81671167 None:intergenic 40.0%
!! CTTGAAGAAGCTCTGAATTC+TGG + Chr4:81670988-81671007 MsG0480023166.01.T01:CDS 40.0%
!! GATTAGTCAAGGTTGGCTTA+TGG + Chr4:81667870-81667889 MsG0480023166.01.T01:intron 40.0%
!! TTGATTTGGGTGGTTCTTGT+TGG - Chr4:81667022-81667041 None:intergenic 40.0%
!! TTGCTTAGAGTTGATTTGGG+TGG - Chr4:81667032-81667051 None:intergenic 40.0%
!!! AACTTCTGCAGTGCTGTTTT+TGG + Chr4:81668151-81668170 MsG0480023166.01.T01:intron 40.0%
!!! ACTTCTGCAGTGCTGTTTTT+GGG + Chr4:81668152-81668171 MsG0480023166.01.T01:intron 40.0%
!!! CATTTTTTGGGTAACAGTGG+AGG + Chr4:81670285-81670304 MsG0480023166.01.T01:intron 40.0%
AGCGACTAGACTAGCATTTG+AGG - Chr4:81668316-81668335 None:intergenic 45.0%
AGGAGATCATTAGAGCTGAG+AGG + Chr4:81668418-81668437 MsG0480023166.01.T01:CDS 45.0%
ATTAGAGCTGAGAGGAACTC+TGG + Chr4:81668426-81668445 MsG0480023166.01.T01:CDS 45.0%
ATTGATGCTATTGCACCTGG+TGG + Chr4:81667295-81667314 MsG0480023166.01.T01:CDS 45.0%
ATTTGGCCAGCTGCAGAATA+TGG + Chr4:81668181-81668200 MsG0480023166.01.T01:CDS 45.0%
CACGGAGAAATCAAATGTGG+TGG - Chr4:81671340-81671359 None:intergenic 45.0%
CAGGAAAAGAGTGAACGGTA+AGG - Chr4:81669157-81669176 None:intergenic 45.0%
GAAGAGAGTGAAAAGGGTGA+AGG + Chr4:81667184-81667203 MsG0480023166.01.T01:CDS 45.0%
GAGTGAACGGTAAGGATATC+AGG - Chr4:81669149-81669168 None:intergenic 45.0%
GCGACTAGACTAGCATTTGA+GGG - Chr4:81668315-81668334 None:intergenic 45.0%
GCGCTTCACTACTTCAACAT+TGG + Chr4:81669348-81669367 MsG0480023166.01.T01:intron 45.0%
TGAAGCTTCTTTCAGAGGAG+CGG + Chr4:81670483-81670502 MsG0480023166.01.T01:intron 45.0%
! CTTACCGTTCACTCTTTTCC+TGG + Chr4:81669155-81669174 MsG0480023166.01.T01:intron 45.0%
!! CGGTTTTGACAAAAGGGTGT+TGG - Chr4:81667113-81667132 None:intergenic 45.0%
!! TAGTCAAGGTTGGCTTATGG+TGG + Chr4:81667873-81667892 MsG0480023166.01.T01:intron 45.0%
!! AAAAAATATCTTATAAAAAA+GGG - Chr4:81668534-81668553 None:intergenic 5.0%
!!! TTTTAGAAAATTTTAAAAAT+TGG + Chr4:81670771-81670790 MsG0480023166.01.T01:intron 5.0%
AAAGCCGTGTTCCATCACCT+TGG - Chr4:81669872-81669891 None:intergenic 50.0%
AAGGCTGGTGTCTTCACTGT+TGG + Chr4:81667328-81667347 MsG0480023166.01.T01:CDS 50.0%
AAGTGCAGAGTAGTGACCAC+TGG - Chr4:81666993-81667012 None:intergenic 50.0%
ACACCTCCTACTCCTAACAG+TGG + Chr4:81670239-81670258 MsG0480023166.01.T01:intron 50.0%
ATGCTTTCGCTCAAGTCCCA+CGG - Chr4:81669959-81669978 None:intergenic 50.0%
CAAGTTAAGAGCAGACCCGT+GGG + Chr4:81669940-81669959 MsG0480023166.01.T01:intron 50.0%
CTCCTACTCCTAACAGTGGA+GGG + Chr4:81670243-81670262 MsG0480023166.01.T01:intron 50.0%
GCCCTTAAGTTAGCAAGGTC+AGG - Chr4:81671123-81671142 None:intergenic 50.0%
GGGATGCCCTTAAGTTAGCA+AGG - Chr4:81671128-81671147 None:intergenic 50.0%
GTCCTTCCATATTCTGCAGC+TGG - Chr4:81668190-81668209 None:intergenic 50.0%
TCCTACTCCTAACAGTGGAG+GGG + Chr4:81670244-81670263 MsG0480023166.01.T01:intron 50.0%
TCTATGTCTACCACGACCAG+TGG + Chr4:81666974-81666993 MsG0480023166.01.T01:CDS 50.0%
! ACCTGGTGGATCAGCTGATA+AGG + Chr4:81667309-81667328 MsG0480023166.01.T01:CDS 50.0%
! ACGGCTTTGGCTTAACAGGT+TGG + Chr4:81669884-81669903 MsG0480023166.01.T01:intron 50.0%
! ACTGCTGCTTCATCAGGTTC+TGG - Chr4:81669250-81669269 None:intergenic 50.0%
! AGCGAAAGCATGAGTCCTGT+GGG + Chr4:81669968-81669987 MsG0480023166.01.T01:intron 50.0%
! CGGCTTTGGCTTAACAGGTT+GGG + Chr4:81669885-81669904 MsG0480023166.01.T01:intron 50.0%
! GAACACGGCTTTGGCTTAAC+AGG + Chr4:81669880-81669899 MsG0480023166.01.T01:intron 50.0%
! GGTCTGCTCTTAACTTGGAG+CGG - Chr4:81669937-81669956 None:intergenic 50.0%
! GTCTGCTCTTAACTTGGAGC+GGG - Chr4:81669936-81669955 None:intergenic 50.0%
! TTTGGCTTAACAGGTTGGGC+TGG + Chr4:81669889-81669908 MsG0480023166.01.T01:intron 50.0%
!! AAGGTGATGGAACACGGCTT+TGG + Chr4:81669871-81669890 MsG0480023166.01.T01:intron 50.0%
!! TCAAGGTTGGCTTATGGTGG+TGG + Chr4:81667876-81667895 MsG0480023166.01.T01:intron 50.0%
!! TGCTAACTTAAGGGCATCCC+CGG + Chr4:81671128-81671147 MsG0480023166.01.T01:CDS 50.0%
!! TTCAATGGGCTAGACTCACC+AGG - Chr4:81670344-81670363 None:intergenic 50.0%
ACCCCTCCACTGTTAGGAGT+AGG - Chr4:81670248-81670267 None:intergenic 55.0%
AGAGTAGTGACCACTGGTCG+TGG - Chr4:81666987-81667006 None:intergenic 55.0%
AGGCTTAAGAGCAGACCCGT+GGG + Chr4:81670015-81670034 MsG0480023166.01.T01:intron 55.0%
ATGCCTTCGCTCAAGTCCCA+CGG - Chr4:81670034-81670053 None:intergenic 55.0%
CCAAGTTAAGAGCAGACCCG+TGG + Chr4:81669939-81669958 MsG0480023166.01.T01:intron 55.0%
CCACGGGTCTGCTCTTAACT+TGG - Chr4:81669942-81669961 None:intergenic 55.0%
CCTCCACTGTTAGGAGTAGG+AGG - Chr4:81670245-81670264 None:intergenic 55.0%
CCTCCTACTCCTAACAGTGG+AGG + Chr4:81670242-81670261 MsG0480023166.01.T01:intron 55.0%
CCTGTGGGTCTTAGACAGGA+GGG + Chr4:81669983-81670002 MsG0480023166.01.T01:intron 55.0%
GAGTCCTGTGGGTCTTAGAC+AGG + Chr4:81669979-81669998 MsG0480023166.01.T01:intron 55.0%
GCCTTATCAGCTGATCCACC+AGG - Chr4:81667313-81667332 None:intergenic 55.0%
GCTCACGGATCCATGAACCA+TGG + Chr4:81668350-81668369 MsG0480023166.01.T01:intron 55.0%
GCTGGTATTGTTGCCGAGCT+GGG + Chr4:81669816-81669835 MsG0480023166.01.T01:intron 55.0%
GGCCAGCTGCAGAATATGGA+AGG + Chr4:81668185-81668204 MsG0480023166.01.T01:CDS 55.0%
GGGTCTTAGACAGGAGGGTA+TGG + Chr4:81669988-81670007 MsG0480023166.01.T01:intron 55.0%
GGTAACAGTGGAGGGATCAC+AGG + Chr4:81670294-81670313 MsG0480023166.01.T01:intron 55.0%
GGTGGATCAGCTGATAAGGC+TGG + Chr4:81667313-81667332 MsG0480023166.01.T01:CDS 55.0%
TCCTGTGGGTCTTAGACAGG+AGG + Chr4:81669982-81670001 MsG0480023166.01.T01:intron 55.0%
TGCTGGTATTGTTGCCGAGC+TGG + Chr4:81669815-81669834 MsG0480023166.01.T01:intron 55.0%
TGCTTTCGCTCAAGTCCCAC+GGG - Chr4:81669958-81669977 None:intergenic 55.0%
! ACTCACCAGGTGTTGTGGAC+TGG - Chr4:81670331-81670350 None:intergenic 55.0%
! AGCGAAGGCATGAGTCCTGT+GGG + Chr4:81670043-81670062 MsG0480023166.01.T01:intron 55.0%
! CTCTTAACTTGGAGCGGGCT+TGG - Chr4:81670132-81670151 None:intergenic 55.0%
! CTTGCGACTGCTGCTTCATC+AGG - Chr4:81669256-81669275 None:intergenic 55.0%
! GAGCGAAAGCATGAGTCCTG+TGG + Chr4:81669967-81669986 MsG0480023166.01.T01:intron 55.0%
! GCTAGACTCACCAGGTGTTG+TGG - Chr4:81670336-81670355 None:intergenic 55.0%
!! GGCACCAAGGTGATGGAACA+CGG + Chr4:81669865-81669884 MsG0480023166.01.T01:intron 55.0%
CACCACCAGTCCACAACACC+TGG + Chr4:81670323-81670342 MsG0480023166.01.T01:intron 60.0%
GAGGCTTAAGAGCAGACCCG+TGG + Chr4:81670014-81670033 MsG0480023166.01.T01:intron 60.0%
GGCTAGACCCCTCCACTGTT+AGG - Chr4:81670254-81670273 None:intergenic 60.0%
GTTTCGTGGCTGCACCATGC+TGG + Chr4:81670096-81670115 MsG0480023166.01.T01:intron 60.0%
TGCCTTCGCTCAAGTCCCAC+GGG - Chr4:81670033-81670052 None:intergenic 60.0%
! AACTTGGAGCGGGCTTGGAG+CGG - Chr4:81670127-81670146 None:intergenic 60.0%
! AGACAGGAGGGTATGGCGTG+AGG + Chr4:81669995-81670014 MsG0480023166.01.T01:intron 60.0%
! CCCTCCTGTCTAAGACCCAC+AGG - Chr4:81669986-81670005 None:intergenic 60.0%
! GAGCGAAGGCATGAGTCCTG+TGG + Chr4:81670042-81670061 MsG0480023166.01.T01:intron 60.0%
! GCTCTTAACTTGGAGCGGGC+AGG - Chr4:81669932-81669951 None:intergenic 60.0%
! GGCTTAACAGGTTGGGCTGG+TGG + Chr4:81669892-81669911 MsG0480023166.01.T01:intron 60.0%
!! AAGTGGGGGCACCAAGGTGA+TGG + Chr4:81669858-81669877 MsG0480023166.01.T01:intron 60.0%
!! ATCACCTTGGTGCCCCCACT+TGG - Chr4:81669859-81669878 None:intergenic 60.0%
!! ATGGCGTGAGGCTGGTTTCG+TGG + Chr4:81670082-81670101 MsG0480023166.01.T01:intron 60.0%
!! CACCAGGTGTTGTGGACTGG+TGG - Chr4:81670328-81670347 None:intergenic 60.0%
!! GGTGTTGTGGACTGGTGGTG+TGG - Chr4:81670323-81670342 None:intergenic 60.0%
!! GTTGTGGACTGGTGGTGTGG+TGG - Chr4:81670320-81670339 None:intergenic 60.0%
!! TCACCTTGGTGCCCCCACTT+GGG - Chr4:81669858-81669877 None:intergenic 60.0%
CAAGCCGGCGTTACCCAGCT+CGG - Chr4:81669832-81669851 None:intergenic 65.0%
CCCCCACTTGGGTCACAAGC+CGG - Chr4:81669847-81669866 None:intergenic 65.0%
GACCCGTGGGACTTGAGCGA+AGG + Chr4:81669953-81669972 MsG0480023166.01.T01:intron 65.0%
GTTGCCGAGCTGGGTAACGC+CGG + Chr4:81669825-81669844 MsG0480023166.01.T01:intron 65.0%
! ACTTGGAGCGGGCTTGGAGC+GGG - Chr4:81670126-81670145 None:intergenic 65.0%
! AGGAGGGTATGGCGTGAGGC+TGG + Chr4:81669999-81670018 MsG0480023166.01.T01:intron 65.0%
! CCGGCTTGTGACCCAAGTGG+GGG + Chr4:81669844-81669863 MsG0480023166.01.T01:intron 65.0%
!! ACGCCGGCTTGTGACCCAAG+TGG + Chr4:81669841-81669860 MsG0480023166.01.T01:intron 65.0%
!! CGCCGGCTTGTGACCCAAGT+GGG + Chr4:81669842-81669861 MsG0480023166.01.T01:intron 65.0%
!! GCCGGCTTGTGACCCAAGTG+GGG + Chr4:81669843-81669862 MsG0480023166.01.T01:intron 65.0%
!! TGACCCAAGTGGGGGCACCA+AGG + Chr4:81669852-81669871 MsG0480023166.01.T01:intron 65.0%
GGCTGGTGGCTGCACCATGC+TGG + Chr4:81669906-81669925 MsG0480023166.01.T01:intron 70.0%
TTGGAGCGGGCAGGCCAGCA+TGG - Chr4:81669923-81669942 None:intergenic 70.0%
!! GGAGCGGGCTTGGAGCGGGC+AGG - Chr4:81670122-81670141 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 81666831 81671482 81666831 ID=MsG0480023166.01;Name=MsG0480023166.01
Chr4 mRNA 81666831 81671482 81666831 ID=MsG0480023166.01.T01;Parent=MsG0480023166.01;Name=MsG0480023166.01.T01;_AED=0.42;_eAED=0.42;_QI=134|1|1|1|1|1|7|234|336
Chr4 exon 81666831 81667371 81666831 ID=MsG0480023166.01.T01:exon:708;Parent=MsG0480023166.01.T01
Chr4 exon 81668162 81668268 81668162 ID=MsG0480023166.01.T01:exon:709;Parent=MsG0480023166.01.T01
Chr4 exon 81668385 81668479 81668385 ID=MsG0480023166.01.T01:exon:710;Parent=MsG0480023166.01.T01
Chr4 exon 81668607 81668683 81668607 ID=MsG0480023166.01.T01:exon:711;Parent=MsG0480023166.01.T01
Chr4 exon 81669192 81669312 81669192 ID=MsG0480023166.01.T01:exon:712;Parent=MsG0480023166.01.T01
Chr4 exon 81670967 81671026 81670967 ID=MsG0480023166.01.T01:exon:713;Parent=MsG0480023166.01.T01
Chr4 exon 81671105 81671482 81671105 ID=MsG0480023166.01.T01:exon:714;Parent=MsG0480023166.01.T01
Chr4 five_prime_UTR 81666831 81666964 81666831 ID=MsG0480023166.01.T01:five_prime_utr;Parent=MsG0480023166.01.T01
Chr4 CDS 81666965 81667371 81666965 ID=MsG0480023166.01.T01:cds;Parent=MsG0480023166.01.T01
Chr4 CDS 81668162 81668268 81668162 ID=MsG0480023166.01.T01:cds;Parent=MsG0480023166.01.T01
Chr4 CDS 81668385 81668479 81668385 ID=MsG0480023166.01.T01:cds;Parent=MsG0480023166.01.T01
Chr4 CDS 81668607 81668683 81668607 ID=MsG0480023166.01.T01:cds;Parent=MsG0480023166.01.T01
Chr4 CDS 81669192 81669312 81669192 ID=MsG0480023166.01.T01:cds;Parent=MsG0480023166.01.T01
Chr4 CDS 81670967 81671026 81670967 ID=MsG0480023166.01.T01:cds;Parent=MsG0480023166.01.T01
Chr4 CDS 81671105 81671248 81671105 ID=MsG0480023166.01.T01:cds;Parent=MsG0480023166.01.T01
Chr4 three_prime_UTR 81671249 81671482 81671249 ID=MsG0480023166.01.T01:three_prime_utr;Parent=MsG0480023166.01.T01
Gene Sequence

>MsG0480023166.01.T01

ATGTCATTATCTATGTCTACCACGACCAGTGGTCACTACTCTGCACTTTCATTGCCAACAAGAACCACCCAAATCAACTCTAAGCAAAACCCAACTTATTTTTTTCCCACCACCAAGTTGTTTTCTTCAAAAAACCATTCATTTTCCAACACCCTTTTGTCAAAACCGTTCCTTTTTGTGGTTAAAGCTTCATCTGATGTTGGGTCAGATGCATCCAAAGAAGAGAGTGAAAAGGGTGAAGGAGAAAAAGAGCCATATGAAGAGTATGAGGTAGAGATTGATCAGCCTTATGGAATCAAATTTGTAAAAGGAAGAGATGGTGGAACTTACATTGATGCTATTGCACCTGGTGGATCAGCTGATAAGGCTGGTGTCTTCACTGTTGGTGATAAAGTACTTGCCACTAGTGCTGTTTTTGGGACTGAAATTTGGCCAGCTGCAGAATATGGAAGGACAATGTACACAATTCGCCAAAGAATTGGACCGTTACTCATGAGAATGCAGAAGAGATATGGAAAGATAGAAACTGGTGGTGATTTAACTGAAAAGGAGATCATTAGAGCTGAGAGGAACTCTGGTGTAGTCAGTAACAAATTGAGGGAAATTCAAATGCAAAACTACCTAAGGAAAAAAGAAGTGAAAGAGGGTCGGGAAAATGATTTGAGAGAAGGCTTATTACTATACAGGAATGCTAAATATGAGGAAGCACTAGAGAAATTTGAGTCTGTTCTGGGATCAAAGCCAGAACCTGATGAAGCAGCAGTCGCAAGCTATAACGTTGCTTGTTGTTACTCTAAGCTAAACCAGATTCAAGCTGCACTTTCGACACTTGAAGAAGCTCTGAATTCTGGTTTTGAAGACTTCAAGAGAATCAGAACTGATCCTGACCTTGCTAACTTAAGGGCATCCCCGGAATTCGATCCATTATTGAAAAGATTTGATGAATCATTTATCAATGAGAGCGCCATCAATGCCATCAAATCAATATTTGGAATATTTGATAAGAAATAA

Protein sequence

>MsG0480023166.01.T01

MSLSMSTTTSGHYSALSLPTRTTQINSKQNPTYFFPTTKLFSSKNHSFSNTLLSKPFLFVVKASSDVGSDASKEESEKGEGEKEPYEEYEVEIDQPYGIKFVKGRDGGTYIDAIAPGGSADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKIETGGDLTEKEIIRAERNSGVVSNKLREIQMQNYLRKKEVKEGRENDLREGLLLYRNAKYEEALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIQAALSTLEEALNSGFEDFKRIRTDPDLANLRASPEFDPLLKRFDESFINESAINAIKSIFGIFDKK*