AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006706.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006706.01.T01 MTR_2g013250 91.768 328 27 0 1 328 1 328 0.0 627
MsG0280006706.01.T01 MTR_2g013230 87.805 328 40 0 1 328 2 329 0.0 595
MsG0280006706.01.T01 MTR_2g013260 85.671 328 47 0 1 328 2 329 0.0 556
MsG0280006706.01.T01 MTR_2g013260 86.441 295 40 0 1 295 2 296 2.42e-178 506
MsG0280006706.01.T01 MTR_2g013300 94.253 261 15 0 326 586 179 439 4.23e-157 457
MsG0280006706.01.T01 MTR_2g013230 83.475 236 39 0 93 328 4 239 7.80e-139 403
MsG0280006706.01.T01 MTR_7g117190 59.819 331 128 4 1 328 1 329 3.31e-135 397
MsG0280006706.01.T01 MTR_2g013260 80.851 235 45 0 94 328 24 258 4.46e-124 367
MsG0280006706.01.T01 MTR_7g117190 58.940 302 119 4 1 299 1 300 1.46e-119 356
MsG0280006706.01.T01 MTR_7g067510 56.693 254 110 0 328 581 190 443 2.81e-106 327
MsG0280006706.01.T01 MTR_7g117190 56.164 219 91 4 113 328 3 219 1.36e-76 243
MsG0280006706.01.T01 MTR_1g022445 34.688 320 188 8 7 323 8 309 1.51e-51 180
MsG0280006706.01.T01 MTR_1g022440 35.312 320 186 8 7 323 8 309 3.73e-51 179
MsG0280006706.01.T01 MTR_4g092080 31.737 334 214 7 6 336 13 335 7.98e-50 176
MsG0280006706.01.T01 MTR_7g074730 33.433 335 195 9 2 328 3 317 8.01e-48 170
MsG0280006706.01.T01 MTR_7g074880 34.132 334 192 9 2 328 3 315 8.87e-48 170
MsG0280006706.01.T01 MTR_7g074850 34.139 331 199 8 2 328 3 318 9.78e-48 170
MsG0280006706.01.T01 MTR_7g074820 34.328 335 185 10 6 328 7 318 9.19e-47 167
MsG0280006706.01.T01 MTR_7g074710 32.733 333 198 9 2 328 3 315 4.59e-44 160
MsG0280006706.01.T01 MTR_4g081440 29.552 335 209 7 4 326 17 336 1.40e-39 148
MsG0280006706.01.T01 MTR_4g081440 29.167 336 210 8 4 326 21 341 1.10e-38 146
MsG0280006706.01.T01 MTR_4g023730 31.804 327 200 10 7 327 8 317 6.35e-36 137
MsG0280006706.01.T01 MTR_5g072620 31.532 333 197 10 7 332 5 313 3.49e-34 132
MsG0280006706.01.T01 MTR_7g074870 31.271 291 173 8 44 328 8 277 1.02e-33 130
MsG0280006706.01.T01 MTR_3g005210 31.834 289 178 5 7 295 6 275 1.34e-33 130
MsG0280006706.01.T01 MTR_2g101330 29.483 329 212 7 6 333 4 313 1.00e-32 128
MsG0280006706.01.T01 MTR_3g031650 30.240 334 200 9 7 332 5 313 1.71e-32 127
MsG0280006706.01.T01 MTR_3g005170 31.058 293 175 7 7 295 10 279 1.64e-31 124
MsG0280006706.01.T01 MTR_5g056600 28.144 334 209 9 8 334 5 314 2.72e-31 124
MsG0280006706.01.T01 MTR_3g005170 31.058 293 175 7 7 295 10 279 8.21e-31 123
MsG0280006706.01.T01 MTR_3g031650 30.822 292 171 8 7 292 5 271 1.86e-30 120
MsG0280006706.01.T01 MTR_4g077130 31.399 293 174 7 7 295 9 278 2.42e-29 119
MsG0280006706.01.T01 MTR_4g084060 29.658 263 160 6 329 581 323 570 2.08e-28 120
MsG0280006706.01.T01 MTR_4g077100 30.690 290 180 9 7 295 11 280 1.70e-27 112
MsG0280006706.01.T01 MTR_2g104960 29.730 333 198 10 7 332 20 323 3.26e-27 113
MsG0280006706.01.T01 MTR_4g077100 30.690 290 180 9 7 295 11 280 4.36e-27 112
MsG0280006706.01.T01 MTR_8g062440 28.616 318 199 7 7 320 8 301 2.04e-26 110
MsG0280006706.01.T01 MTR_4g009040 29.305 331 203 12 6 331 12 316 2.37e-26 110
MsG0280006706.01.T01 MTR_8g062440 29.470 302 185 7 7 304 8 285 2.44e-26 110
MsG0280006706.01.T01 MTR_4g009040 28.955 335 203 12 6 331 12 320 5.40e-26 109
MsG0280006706.01.T01 MTR_4g006940 27.660 329 210 10 7 332 17 320 1.13e-25 108
MsG0280006706.01.T01 MTR_8g062110 29.630 297 183 7 7 300 9 282 3.42e-25 106
MsG0280006706.01.T01 MTR_8g062110 29.452 292 180 7 7 295 9 277 5.08e-25 105
MsG0280006706.01.T01 MTR_4g009690 29.394 330 203 11 6 331 12 315 8.52e-25 105
MsG0280006706.01.T01 MTR_8g062440 28.527 319 199 8 7 320 8 302 9.66e-25 105
MsG0280006706.01.T01 MTR_8g062110 30.137 292 178 8 7 295 9 277 1.01e-24 105
MsG0280006706.01.T01 MTR_8g062110 30.137 292 178 8 7 295 18 286 1.03e-24 105
MsG0280006706.01.T01 MTR_4g009690 29.607 331 202 12 6 331 12 316 1.92e-24 104
MsG0280006706.01.T01 MTR_2g028620 30.448 335 202 12 7 333 10 321 3.30e-23 101
MsG0280006706.01.T01 MTR_4g006940 28.028 289 183 9 7 295 17 280 1.41e-22 98.6
MsG0280006706.01.T01 MTR_4g006940 28.028 289 183 9 7 295 17 280 1.41e-22 98.6
MsG0280006706.01.T01 MTR_2g028620 31.724 290 168 11 7 288 10 277 1.74e-21 95.9
MsG0280006706.01.T01 MTR_0164s0070 34.965 143 91 2 6 146 4 146 7.34e-18 82.8
MsG0280006706.01.T01 MTR_3g101500 26.523 279 161 13 6 279 3 242 1.53e-12 69.3
MsG0280006706.01.T01 MTR_3g101500 26.523 279 161 13 6 279 3 242 2.67e-12 68.2
MsG0280006706.01.T01 MTR_5g029990 24.623 199 135 6 4 202 9 192 4.41e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006706.01.T01 AT1G61050 61.390 259 97 2 329 585 172 429 2.30e-105 325
MsG0280006706.01.T01 AT1G61050 61.390 259 97 2 329 585 173 430 2.45e-105 325
MsG0280006706.01.T01 AT3G09020 54.150 253 116 0 329 581 150 402 2.60e-101 313
MsG0280006706.01.T01 AT5G01250 54.150 253 116 0 329 581 146 398 3.42e-98 305
MsG0280006706.01.T01 AT2G38152 51.969 254 121 1 329 581 120 373 2.99e-91 286
MsG0280006706.01.T01 AT2G38150 47.826 253 131 1 329 580 142 394 7.55e-88 278
MsG0280006706.01.T01 AT1G61720 32.733 333 214 6 4 335 10 333 4.71e-48 171
MsG0280006706.01.T01 AT5G42800 32.827 329 199 8 7 331 8 318 2.55e-47 170
MsG0280006706.01.T01 AT4G27250 32.326 331 203 8 8 327 14 334 3.18e-44 161
MsG0280006706.01.T01 AT2G45400 33.639 327 195 9 7 326 40 351 6.09e-43 158
MsG0280006706.01.T01 AT4G27250 32.628 331 192 10 8 327 14 324 2.46e-42 155
MsG0280006706.01.T01 AT2G45400 34.256 289 174 7 7 292 40 315 1.03e-40 150
MsG0280006706.01.T01 AT1G09510 35.034 294 162 9 7 295 8 277 9.08e-37 140
MsG0280006706.01.T01 AT4G35420 29.483 329 214 6 6 334 7 317 9.95e-35 134
MsG0280006706.01.T01 AT1G66800 32.464 345 192 10 7 343 8 319 1.05e-34 134
MsG0280006706.01.T01 AT1G09500 33.784 296 164 9 7 295 8 278 4.79e-34 131
MsG0280006706.01.T01 AT1G09500 33.784 296 164 9 7 295 8 278 1.13e-33 131
MsG0280006706.01.T01 AT5G58490 31.138 334 197 11 7 332 9 317 1.53e-33 130
MsG0280006706.01.T01 AT2G45400 35.616 219 132 4 7 222 40 252 2.89e-33 128
MsG0280006706.01.T01 AT2G45400 32.343 303 182 9 29 326 10 294 3.95e-32 126
MsG0280006706.01.T01 AT1G51410 30.201 298 189 6 2 299 4 282 5.94e-32 126
MsG0280006706.01.T01 AT5G19440 30.120 332 203 9 7 332 10 318 2.14e-31 125
MsG0280006706.01.T01 AT1G68540 30.183 328 198 9 9 328 6 310 2.66e-31 124
MsG0280006706.01.T01 AT1G09480 30.769 299 166 7 7 294 8 276 3.83e-30 121
MsG0280006706.01.T01 AT1G09490 31.833 311 168 10 7 304 8 287 6.04e-30 120
MsG0280006706.01.T01 AT1G09480 31.186 295 162 7 7 290 55 319 8.18e-30 121
MsG0280006706.01.T01 AT1G80820 30.060 336 193 11 7 332 8 311 1.30e-28 117
MsG0280006706.01.T01 AT4G19900 30.153 262 160 7 329 581 391 638 1.71e-27 117
MsG0280006706.01.T01 AT1G15950 28.997 369 215 12 7 367 13 342 3.85e-27 113
MsG0280006706.01.T01 AT1G15950 28.997 369 215 12 7 367 13 342 3.85e-27 113
MsG0280006706.01.T01 AT1G76470 29.231 325 209 9 6 328 6 311 4.99e-27 112
MsG0280006706.01.T01 AT2G02400 29.607 331 204 11 7 332 6 312 1.18e-26 111
MsG0280006706.01.T01 AT1G15950 29.499 339 196 11 7 338 13 315 7.15e-26 109
MsG0280006706.01.T01 AT1G80820 31.081 296 165 10 7 295 8 271 1.44e-25 107
MsG0280006706.01.T01 AT1G25460 28.788 330 210 10 9 334 6 314 3.45e-25 107
MsG0280006706.01.T01 AT1G15950 30.537 298 174 9 7 300 13 281 1.56e-24 104
MsG0280006706.01.T01 AT1G15950 30.717 293 170 9 7 295 13 276 4.50e-24 102
MsG0280006706.01.T01 AT2G33590 28.060 335 211 13 6 335 8 317 1.18e-23 102
MsG0280006706.01.T01 AT1G15950 30.690 290 168 9 7 292 13 273 1.29e-23 101
MsG0280006706.01.T01 AT2G33600 27.108 332 218 10 6 335 8 317 2.80e-20 92.4
MsG0280006706.01.T01 AT1G09500 30.303 264 152 9 39 295 6 244 8.77e-20 90.5
MsG0280006706.01.T01 AT1G09490 27.957 279 157 10 39 304 9 256 4.20e-16 79.7
MsG0280006706.01.T01 AT4G33360 25.275 273 164 9 6 275 14 249 5.64e-14 73.6
MsG0280006706.01.T01 AT4G33360 24.176 273 167 7 6 275 14 249 6.65e-14 73.9
MsG0280006706.01.T01 AT4G33360 24.176 273 167 7 6 275 2 237 1.07e-13 72.8
MsG0280006706.01.T01 AT2G23910 22.615 283 191 10 4 285 8 263 2.38e-12 68.6
MsG0280006706.01.T01 AT2G23910 22.615 283 191 10 4 285 8 263 2.40e-12 68.2
MsG0280006706.01.T01 AT2G23910 22.615 283 191 10 4 285 8 263 2.69e-12 68.2
MsG0280006706.01.T01 AT4G30470 25.000 244 153 10 4 238 8 230 6.63e-12 67.4

Find 108 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTCTCTTGTATAAATT+TGG 0.143262 2:+5203204 MsG0280006706.01.T01:CDS
TTCTCTTTCAAATTGAATTC+TGG 0.212502 2:-5199941 None:intergenic
AGGGAGCTTAAGGTTGTTAA+AGG 0.218722 2:+5203654 MsG0280006706.01.T01:CDS
AAAATGGTTGGTTAAGAAAA+TGG 0.225441 2:+5203581 MsG0280006706.01.T01:CDS
AAAGTTATGCAGTGCATCTT+TGG 0.269110 2:+5203619 MsG0280006706.01.T01:CDS
ACTATAACCAAACAAGCTTT+TGG 0.279470 2:-5202979 None:intergenic
TTTGAATGAATCTCATCTTT+AGG 0.289295 2:-5203561 None:intergenic
TCAACAAAGCTCATAGATAA+AGG 0.298417 2:+5200787 MsG0280006706.01.T01:CDS
TAAGTAAATTTGAGAGGTTT+TGG 0.308769 2:-5203179 None:intergenic
TCTCCTAGTCAAGAAGCTTT+TGG 0.309271 2:+5196674 MsG0280006706.01.T01:CDS
AAGATGAGATTCATTCAAAA+TGG 0.313421 2:+5203565 MsG0280006706.01.T01:CDS
ACAGGTGGTGCTGGTTATAT+TGG 0.319946 2:+5196648 MsG0280006706.01.T01:CDS
AATTCACAGCCTTGAATTGC+TGG 0.321732 2:-5197052 None:intergenic
AGCTGCAAGGTGTGTGTTAC+AGG 0.325911 2:+5196630 MsG0280006706.01.T01:CDS
TCAAATCTAAGAAACACTAT+TGG 0.332944 2:+5203270 MsG0280006706.01.T01:CDS
ACCACTCTAGATATTAAATA+AGG 0.350357 2:-5203438 None:intergenic
CATCTTGAGATCATATTTGT+AGG 0.350926 2:-5200815 None:intergenic
AGTTATGGTAAAGATGAAAA+TGG 0.352631 2:+5199620 MsG0280006706.01.T01:CDS
AAGTCAATGGATTCTGATAA+AGG 0.359646 2:+5203006 MsG0280006706.01.T01:CDS
ACTTCATTGATGAAACTTGT+TGG 0.365623 2:+5197520 MsG0280006706.01.T01:CDS
AGAGAATTATTAACGAGTTA+TGG 0.366349 2:+5199605 MsG0280006706.01.T01:CDS
GTCACACCCAAAAGCTTGTT+TGG 0.368554 2:+5202972 MsG0280006706.01.T01:CDS
TTGAATATATAGTTGAAATC+AGG 0.370496 2:-5203084 None:intergenic
ATGCGGAATCATGGTTTAAT+CGG 0.374532 2:+5203115 MsG0280006706.01.T01:CDS
ATGCAGTGCATCTTTGGAAT+AGG 0.378565 2:+5203625 MsG0280006706.01.T01:CDS
AATCCAGGTGAAATTTCATT+AGG 0.391488 2:+5203156 MsG0280006706.01.T01:CDS
ATAATCACTGCAACACTTGC+GGG 0.395620 2:-5199713 None:intergenic
AGAATCAGTTTGATGTAGAT+AGG 0.396421 2:-5197095 None:intergenic
GGGATAAAGAGTTTGTTTAG+AGG 0.402696 2:+5203537 MsG0280006706.01.T01:CDS
GCCTCTCAGAAAGCTGACTT+TGG 0.417578 2:-5196963 None:intergenic
TCCTCTCACCGCTTTCCATA+AGG 0.418685 2:+5197566 MsG0280006706.01.T01:CDS
TTGATGTGAAAACAAAGAAA+TGG 0.428656 2:+5203304 MsG0280006706.01.T01:CDS
TCTAGAGTAAGTGGAAGAGA+AGG 0.431829 2:+5203462 MsG0280006706.01.T01:CDS
ACTCTTGGTGTTGGCCTAGT+GGG 0.433402 2:+5199665 MsG0280006706.01.T01:CDS
TCCACATGCAAATACAAGAT+TGG 0.441027 2:+5196988 MsG0280006706.01.T01:CDS
TAGGCAAAGTAGGGAGCTTA+AGG 0.444308 2:+5203644 MsG0280006706.01.T01:CDS
GGTTATAGTCTCAAAGTCAA+TGG 0.444664 2:+5202993 MsG0280006706.01.T01:CDS
AGTCAAACAGAGCAATCAAA+TGG 0.449477 2:+5200761 MsG0280006706.01.T01:CDS
CAACAAAGCTCATAGATAAA+GGG 0.450243 2:+5200788 MsG0280006706.01.T01:CDS
TTCTCTCTCTGCCAATGTCT+TGG 0.450541 2:-5199588 None:intergenic
AAAACACTCATGCGGAATCA+TGG 0.453280 2:+5203106 MsG0280006706.01.T01:CDS
TCTCTCTTGTATAAATTTGG+AGG 0.457654 2:+5203207 MsG0280006706.01.T01:CDS
TCTACATCAAACTGATTCTC+AGG 0.459043 2:+5197099 MsG0280006706.01.T01:CDS
TGAGATTCATTCAAAATGGT+TGG 0.467421 2:+5203569 MsG0280006706.01.T01:CDS
GAGGTGGTTACTCTTGGTGT+TGG 0.474061 2:+5199656 MsG0280006706.01.T01:CDS
TGAGAGGAAGGTGGAGACTC+TGG 0.474386 2:-5197551 None:intergenic
GCTTCTCCACTGAAGGATGA+TGG 0.480245 2:+5197483 MsG0280006706.01.T01:CDS
GGATAAAGAGTTTGTTTAGA+GGG 0.480661 2:+5203538 MsG0280006706.01.T01:CDS
GGAATTGAGGTGGTTACTCT+TGG 0.482358 2:+5199650 MsG0280006706.01.T01:CDS
TGGTTTAATCGGTTAATACA+AGG 0.486564 2:+5203126 MsG0280006706.01.T01:CDS
AGAGTGGTTTCTAGAGTAAG+TGG 0.486825 2:+5203453 MsG0280006706.01.T01:CDS
AAGTTCTTAGAAGATATAGA+TGG 0.488977 2:+5199776 MsG0280006706.01.T01:CDS
GGTAAAGATGAAAATGGAAA+TGG 0.489339 2:+5199626 MsG0280006706.01.T01:CDS
ATAGAGGAAGCAGCAGTAGC+AGG 0.492362 2:+5197384 MsG0280006706.01.T01:CDS
ATCTTTGGAATAGGCAAAGT+AGG 0.496073 2:+5203634 MsG0280006706.01.T01:CDS
AAAGTCTAAGTAAATTTGAG+AGG 0.506190 2:-5203185 None:intergenic
AGTTAGATTATTATCAGTGA+TGG 0.510789 2:+5196602 MsG0280006706.01.T01:exon
TTTCCAAAAGCTTCTTGACT+AGG 0.510906 2:-5196677 None:intergenic
TGGCCTAATGAAATTTCACC+TGG 0.511792 2:-5203159 None:intergenic
GTGTGTGTTACAGGTGGTGC+TGG 0.512366 2:+5196639 MsG0280006706.01.T01:CDS
CTTCTCCACTGAAGGATGAT+GGG 0.521350 2:+5197484 MsG0280006706.01.T01:CDS
GGAAAGCGGTGAGAGGAAGG+TGG 0.525033 2:-5197560 None:intergenic
TACTCTTGGTGTTGGCCTAG+TGG 0.540652 2:+5199664 MsG0280006706.01.T01:CDS
CTAGAGTAAGTGGAAGAGAA+GGG 0.542639 2:+5203463 MsG0280006706.01.T01:CDS
GTCAAACAGAGCAATCAAAT+GGG 0.548805 2:+5200762 MsG0280006706.01.T01:CDS
TTTATCCTGTGGATTGGAGA+GGG 0.554596 2:+5203517 MsG0280006706.01.T01:CDS
AAAGATGAAAATGGAAATGG+TGG 0.554971 2:+5199629 MsG0280006706.01.T01:CDS
TGTTTATTCACTATTGTGTG+TGG 0.555177 2:+5196545 None:intergenic
TCAATAAACTTCAAAAGCAA+AGG 0.556080 2:-5203369 None:intergenic
GAATCAGTTTGATGTAGATA+GGG 0.556532 2:-5197094 None:intergenic
GATTATTATCAGTGATGGAA+AGG 0.557631 2:+5196607 MsG0280006706.01.T01:exon
GGTTGCTGCTTCTCCACTGA+AGG 0.558373 2:+5197476 MsG0280006706.01.T01:CDS
TAAACTTCAAAAGCAAAGGA+TGG 0.562582 2:-5203365 None:intergenic
TATGGAAAGCGGTGAGAGGA+AGG 0.562621 2:-5197563 None:intergenic
ACATCATCAATGTGGACTAG+TGG 0.564824 2:-5199806 None:intergenic
ACCAATCTTGTATTTGCATG+TGG 0.567821 2:-5196989 None:intergenic
TTTATCCCTCTCCAATCCAC+AGG 0.571574 2:-5203522 None:intergenic
TCCTTATTTAATATCTAGAG+TGG 0.571899 2:+5203437 MsG0280006706.01.T01:CDS
CTTGGTGTTGGCCTAGTGGG+AGG 0.579025 2:+5199668 MsG0280006706.01.T01:CDS
ATACAAGGGAATGTGAATCC+AGG 0.579887 2:+5203141 MsG0280006706.01.T01:CDS
GATAATCACTGCAACACTTG+CGG 0.586260 2:-5199714 None:intergenic
GAAGAGCATCTCCTCCCACT+AGG 0.587729 2:-5199679 None:intergenic
AATACTCAAGTTTCTGAGAG+TGG 0.592377 2:-5196718 None:intergenic
AGTTTGATGTAGATAGGGAG+TGG 0.593081 2:-5197089 None:intergenic
AAATGGAAATGGTGGAATTG+AGG 0.596604 2:+5199637 MsG0280006706.01.T01:CDS
TCTTTGGAATAGGCAAAGTA+GGG 0.597068 2:+5203635 MsG0280006706.01.T01:CDS
GTACGCTTATTCCAAGACAT+TGG 0.600674 2:+5199577 MsG0280006706.01.T01:CDS
GGTTTAATCGGTTAATACAA+GGG 0.610850 2:+5203127 MsG0280006706.01.T01:CDS
ACCTTATGGAAAGCGGTGAG+AGG 0.612095 2:-5197567 None:intergenic
CCACTGAAGGATGATGGGAG+TGG 0.616498 2:+5197489 MsG0280006706.01.T01:CDS
GGAAGGTGGAGACTCTGGAG+AGG 0.622635 2:-5197546 None:intergenic
TCCACAGGATAAAATGCAGA+AGG 0.624138 2:-5203507 None:intergenic
AGTATTTACCTTATGGAAAG+CGG 0.625900 2:-5197574 None:intergenic
AGGACAGTTTAAGAGCATAG+AGG 0.626813 2:+5197368 MsG0280006706.01.T01:intron
ACAGGATAAAATGCAGAAGG+TGG 0.629806 2:-5203504 None:intergenic
TCAAGTTTCTGAGAGTGGCA+TGG 0.630524 2:-5196713 None:intergenic
CAGTGGAGAAGCAGCAACCA+CGG 0.636125 2:-5197472 None:intergenic
TGCAAGGTGTGTGTTACAGG+TGG 0.636996 2:+5196633 MsG0280006706.01.T01:CDS
CCACTCCCATCATCCTTCAG+TGG 0.640324 2:-5197489 None:intergenic
GCGAGAAGACTGATATACAC+TGG 0.641046 2:+5197447 MsG0280006706.01.T01:CDS
GTAGATAGGGAGTGGCAACA+TGG 0.645401 2:-5197081 None:intergenic
AGTGATGGAAAGGAGCTGCA+AGG 0.651284 2:+5196617 MsG0280006706.01.T01:exon
ATATGTTAGATCATTGTGAG+TGG 0.657002 2:+5196576 MsG0280006706.01.T01:five_prime_UTR
TCCAAAGTCAGCTTTCTGAG+AGG 0.659613 2:+5196962 MsG0280006706.01.T01:CDS
TGGAAATGGTGGAATTGAGG+TGG 0.673716 2:+5199640 MsG0280006706.01.T01:CDS
CTTCACAAACATCATCAATG+TGG 0.701450 2:-5199814 None:intergenic
AGAAGGGTATAATTTCAGTG+TGG 0.735161 2:+5203479 MsG0280006706.01.T01:CDS
ACTGATATACACTGGCACCG+TGG 0.763689 2:+5197455 MsG0280006706.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGGTAAAATAAAATTTA+GGG + Chr2:5198713-5198732 MsG0280006706.01.T01:intron 10.0%
!! CAAATAATTAAAAGAATAAA+AGG - Chr2:5198225-5198244 None:intergenic 10.0%
!! CTAAAAAAAATTGAAAAAAA+TGG - Chr2:5196799-5196818 None:intergenic 10.0%
!! TAAAAAAATAAATAAGGTAA+TGG + Chr2:5201081-5201100 MsG0280006706.01.T01:intron 10.0%
!! TAAATGGTAAAATAAAATTT+AGG + Chr2:5198712-5198731 MsG0280006706.01.T01:intron 10.0%
!! TGTTAAAAAAATCATTAAAT+GGG - Chr2:5198985-5199004 None:intergenic 10.0%
!!! AAGTTTTTTTTGTTATAAAA+TGG - Chr2:5202023-5202042 None:intergenic 10.0%
!! AAAAAAAAAAACTTTAGACA+TGG - Chr2:5199227-5199246 None:intergenic 15.0%
!! AAAAAATTGAAAAAAATGGA+TGG - Chr2:5196795-5196814 None:intergenic 15.0%
!! AAAAATTTACTATGTCTAAA+TGG - Chr2:5201624-5201643 None:intergenic 15.0%
!! AAAGAGTAATAATCAATATT+TGG - Chr2:5197133-5197152 None:intergenic 15.0%
!! AAGAGTAATAATCAATATTT+GGG - Chr2:5197132-5197151 None:intergenic 15.0%
!! ATAGTCACAAAATATTAATA+GGG - Chr2:5198295-5198314 None:intergenic 15.0%
!! ATTCTATAAAAAAAAACGTT+TGG - Chr2:5197769-5197788 None:intergenic 15.0%
!! CTGTTAAAAAAATCATTAAA+TGG - Chr2:5198986-5199005 None:intergenic 15.0%
!! CTTGCATAAAAAAATAAATA+AGG + Chr2:5201075-5201094 MsG0280006706.01.T01:intron 15.0%
!! GAAAATTCAAAGTTATAATA+GGG + Chr2:5198587-5198606 MsG0280006706.01.T01:intron 15.0%
!! TAAAGTTTACAAATAGTTTA+TGG + Chr2:5200143-5200162 MsG0280006706.01.T01:intron 15.0%
!! TATAGTCACAAAATATTAAT+AGG - Chr2:5198296-5198315 None:intergenic 15.0%
!!! GTCTAAAGTTTTTTTTTTTT+TGG + Chr2:5199228-5199247 MsG0280006706.01.T01:intron 15.0%
!!! TAAAGTTTTTTTTTTTTTGG+AGG + Chr2:5199231-5199250 MsG0280006706.01.T01:intron 15.0%
!!! TTAAAGGTTAAATATGTTTT+TGG - Chr2:5197685-5197704 None:intergenic 15.0%
!!! TTTTCAACAAAATAATGATA+AGG + Chr2:5198619-5198638 MsG0280006706.01.T01:intron 15.0%
!! AAAAAGATAGAAATATCAAG+CGG - Chr2:5198020-5198039 None:intergenic 20.0%
!! AACATCTACCAAAAAAAAAA+AGG + Chr2:5197738-5197757 MsG0280006706.01.T01:intron 20.0%
!! ACATCTACCAAAAAAAAAAA+GGG + Chr2:5197739-5197758 MsG0280006706.01.T01:intron 20.0%
!! ATACTATATGTTGTATAAGT+TGG - Chr2:5199993-5200012 None:intergenic 20.0%
!! ATGGCTAATGATAAAATTAA+AGG - Chr2:5197701-5197720 None:intergenic 20.0%
!! GCAAGTTAAAAAATGTATAT+TGG + Chr2:5200919-5200938 MsG0280006706.01.T01:intron 20.0%
!! GGAAAATTCAAAGTTATAAT+AGG + Chr2:5198586-5198605 MsG0280006706.01.T01:intron 20.0%
!! GGTAATCAAAAAAAAACAAT+AGG + Chr2:5201010-5201029 MsG0280006706.01.T01:intron 20.0%
!! GTTATTCATAAGTAATTTCT+TGG + Chr2:5198892-5198911 MsG0280006706.01.T01:intron 20.0%
!! TATATGTAGTATTTACCTTA+TGG - Chr2:5197584-5197603 None:intergenic 20.0%
!! TGAAGAAAAAAAAAAGTTTG+TGG - Chr2:5197983-5198002 None:intergenic 20.0%
!! TGTGTTATACTAATTGATTA+TGG + Chr2:5201051-5201070 MsG0280006706.01.T01:intron 20.0%
!! TGTTATATATGGATGTTAAA+TGG + Chr2:5200472-5200491 MsG0280006706.01.T01:intron 20.0%
!! TTACAAGGAAAAATATGTAT+TGG - Chr2:5202116-5202135 None:intergenic 20.0%
!! TTGAATATATAGTTGAAATC+AGG - Chr2:5203087-5203106 None:intergenic 20.0%
!!! AAATATCGAATTGTAACTTT+TGG + Chr2:5199425-5199444 MsG0280006706.01.T01:intron 20.0%
!!! AATGGAGGTATAAAAATTAA+AGG + Chr2:5200490-5200509 MsG0280006706.01.T01:intron 20.0%
!!! AATTCATTTATTGATTTCAG+AGG + Chr2:5196934-5196953 MsG0280006706.01.T01:intron 20.0%
!!! AATTTTCCTATGAAATCTTT+AGG - Chr2:5198574-5198593 None:intergenic 20.0%
!!! ACACTTTTAAATAAGAGAAA+TGG + Chr2:5201986-5202005 MsG0280006706.01.T01:intron 20.0%
!!! ATTTTCCTATGAAATCTTTA+GGG - Chr2:5198573-5198592 None:intergenic 20.0%
!!! ATTTTTTTAACAGTCTAGTT+TGG + Chr2:5198993-5199012 MsG0280006706.01.T01:intron 20.0%
!!! CAATTTTCTTTCAGTTTTTT+TGG - Chr2:5201768-5201787 None:intergenic 20.0%
!!! GTGATTATTACTTGTTTTAA+GGG - Chr2:5201405-5201424 None:intergenic 20.0%
!!! TGTGATTATTACTTGTTTTA+AGG - Chr2:5201406-5201425 None:intergenic 20.0%
!!! TGTTTTTTTTTGATTACCTA+CGG - Chr2:5201008-5201027 None:intergenic 20.0%
!!! TTTTTTTTTGGTAGATGTTT+GGG - Chr2:5197737-5197756 None:intergenic 20.0%
!!! TTTTTTTTTTGGTAGATGTT+TGG - Chr2:5197738-5197757 None:intergenic 20.0%
! AAAAAAAACTTTAGACATGG+TGG - Chr2:5199224-5199243 None:intergenic 25.0%
! AAAGTCTAAGTAAATTTGAG+AGG - Chr2:5203188-5203207 None:intergenic 25.0%
! AAATCAATATGACACATCTA+TGG + Chr2:5199386-5199405 MsG0280006706.01.T01:intron 25.0%
! AAATCTTAGTATGATTCACA+AGG + Chr2:5200656-5200675 MsG0280006706.01.T01:intron 25.0%
! AAATTGAAAAAAATGGATGG+TGG - Chr2:5196792-5196811 None:intergenic 25.0%
! AAGAAAAAAAAAATGCAGAG+AGG - Chr2:5196763-5196782 None:intergenic 25.0%
! AAGATGAGATTCATTCAAAA+TGG + Chr2:5203565-5203584 MsG0280006706.01.T01:CDS 25.0%
! AAGTTCTTAGAAGATATAGA+TGG + Chr2:5199776-5199795 MsG0280006706.01.T01:CDS 25.0%
! ACACAACATGTTATTATTCT+AGG + Chr2:5198315-5198334 MsG0280006706.01.T01:intron 25.0%
! ACCACTCTAGATATTAAATA+AGG - Chr2:5203441-5203460 None:intergenic 25.0%
! ACTTTCTCACACAATAATAA+TGG + Chr2:5197610-5197629 MsG0280006706.01.T01:intron 25.0%
! AGAAAAAAAAAATGCAGAGA+GGG - Chr2:5196762-5196781 None:intergenic 25.0%
! AGAAACCAAAGTAATAGAAA+GGG - Chr2:5202090-5202109 None:intergenic 25.0%
! AGAATACGTTTATGTGAATT+GGG + Chr2:5197784-5197803 MsG0280006706.01.T01:intron 25.0%
! AGAGAATTATTAACGAGTTA+TGG + Chr2:5199605-5199624 MsG0280006706.01.T01:CDS 25.0%
! AGCTAAAATACCAAAAAGAT+AGG - Chr2:5201258-5201277 None:intergenic 25.0%
! AGTTAGATTATTATCAGTGA+TGG + Chr2:5196602-5196621 MsG0280006706.01.T01:exon 25.0%
! AGTTATGGTAAAGATGAAAA+TGG + Chr2:5199620-5199639 MsG0280006706.01.T01:CDS 25.0%
! ATTAAGGGTTAAACATACAA+AGG + Chr2:5198094-5198113 MsG0280006706.01.T01:intron 25.0%
! ATTTGTGGGAAGAAAAAAAA+TGG - Chr2:5198935-5198954 None:intergenic 25.0%
! CACATATTGGATGTAAATAT+AGG - Chr2:5199261-5199280 None:intergenic 25.0%
! CATATATAACAAAGCATGAT+TGG - Chr2:5200463-5200482 None:intergenic 25.0%
! CTATATTTACATCCAATATG+TGG + Chr2:5199259-5199278 MsG0280006706.01.T01:intron 25.0%
! CTTTCTCTCTTGTATAAATT+TGG + Chr2:5203204-5203223 MsG0280006706.01.T01:CDS 25.0%
! GTATGTTTAACCCTTAATTT+AGG - Chr2:5198092-5198111 None:intergenic 25.0%
! GTGCACAAAAGTTTATATTA+GGG + Chr2:5201310-5201329 MsG0280006706.01.T01:intron 25.0%
! GTTAACACATCCTAAATTAA+GGG + Chr2:5198079-5198098 MsG0280006706.01.T01:intron 25.0%
! TAAAAATTTGATTGTCCGTT+TGG + Chr2:5202133-5202152 MsG0280006706.01.T01:intron 25.0%
! TAGAATACGTTTATGTGAAT+TGG + Chr2:5197783-5197802 MsG0280006706.01.T01:intron 25.0%
! TAGATTCTCGTGATTATATA+TGG + Chr2:5201206-5201225 MsG0280006706.01.T01:intron 25.0%
! TATAAGAGATTTCTCTTTGT+AGG - Chr2:5200039-5200058 None:intergenic 25.0%
! TATATATGGATGTTAAATGG+AGG + Chr2:5200475-5200494 MsG0280006706.01.T01:intron 25.0%
! TATATTCAAAAACACTCATG+CGG + Chr2:5203098-5203117 MsG0280006706.01.T01:CDS 25.0%
! TATCATTAGCCATACATAAA+GGG + Chr2:5197708-5197727 MsG0280006706.01.T01:intron 25.0%
! TATGTGCTTATTTGATCTAA+GGG + Chr2:5199145-5199164 MsG0280006706.01.T01:intron 25.0%
! TCAAATCTAAGAAACACTAT+TGG + Chr2:5203270-5203289 MsG0280006706.01.T01:CDS 25.0%
! TCAATAAACTTCAAAAGCAA+AGG - Chr2:5203372-5203391 None:intergenic 25.0%
! TCTTTAACATGTGTCATAAA+AGG + Chr2:5200275-5200294 MsG0280006706.01.T01:intron 25.0%
! TGTGCACAAAAGTTTATATT+AGG + Chr2:5201309-5201328 MsG0280006706.01.T01:intron 25.0%
! TGTTAACACATCCTAAATTA+AGG + Chr2:5198078-5198097 MsG0280006706.01.T01:intron 25.0%
! TTAAGGGTTAAACATACAAA+GGG + Chr2:5198095-5198114 MsG0280006706.01.T01:intron 25.0%
! TTAGTATTACGTTGTTGATA+TGG + Chr2:5200975-5200994 MsG0280006706.01.T01:intron 25.0%
! TTATCATTAGCCATACATAA+AGG + Chr2:5197707-5197726 MsG0280006706.01.T01:intron 25.0%
! TTCTCTTTCAAATTGAATTC+TGG - Chr2:5199944-5199963 None:intergenic 25.0%
! TTGATGTGAAAACAAAGAAA+TGG + Chr2:5203304-5203323 MsG0280006706.01.T01:CDS 25.0%
! TTTGAATGAATCTCATCTTT+AGG - Chr2:5203564-5203583 None:intergenic 25.0%
! TTTGTGGGAAGAAAAAAAAT+GGG - Chr2:5198934-5198953 None:intergenic 25.0%
!! AAAATGGTTGGTTAAGAAAA+TGG + Chr2:5203581-5203600 MsG0280006706.01.T01:CDS 25.0%
!! AATATTTGCCATCTGATTTT+AGG + Chr2:5200728-5200747 MsG0280006706.01.T01:intron 25.0%
!! ATCTATCAATGACAGATTTT+TGG + Chr2:5199862-5199881 MsG0280006706.01.T01:CDS 25.0%
!! ATGTTATGTTCTGTTTGTTT+TGG - Chr2:5202283-5202302 None:intergenic 25.0%
!! ATGTTATTATTCTAGGTTGA+GGG + Chr2:5198322-5198341 MsG0280006706.01.T01:intron 25.0%
!! ATTACTCTTTTCTTTCCTTT+TGG + Chr2:5197143-5197162 MsG0280006706.01.T01:intron 25.0%
!! ATTTCAAGTACATAACCAAA+AGG - Chr2:5197161-5197180 None:intergenic 25.0%
!! CAATCATGCTTTGTTATATA+TGG + Chr2:5200461-5200480 MsG0280006706.01.T01:intron 25.0%
!! TAAGTAAATTTGAGAGGTTT+TGG - Chr2:5203182-5203201 None:intergenic 25.0%
!! TCCTTATTTAATATCTAGAG+TGG + Chr2:5203437-5203456 MsG0280006706.01.T01:CDS 25.0%
!! TCTATAAACCAGATGATTTT+TGG + Chr2:5197029-5197048 MsG0280006706.01.T01:CDS 25.0%
!! TGACTAATGACATTAGTTTA+CGG + Chr2:5198133-5198152 MsG0280006706.01.T01:intron 25.0%
!!! AAATGTCTTTTGTTGATGAT+TGG - Chr2:5202718-5202737 None:intergenic 25.0%
!!! AGTTGAGATTTTTTATGACT+TGG + Chr2:5202890-5202909 MsG0280006706.01.T01:intron 25.0%
!!! ATATAATGATGGATCATCTT+GGG + Chr2:5200886-5200905 MsG0280006706.01.T01:intron 25.0%
!!! CTAAAACCATTTTTCACAAA+GGG - Chr2:5203048-5203067 None:intergenic 25.0%
!!! CTTTTTTTTTTCTTCAGAAG+AGG + Chr2:5197987-5198006 MsG0280006706.01.T01:intron 25.0%
!!! GCAGTTTTTTTTTTTTTGGA+TGG - Chr2:5201844-5201863 None:intergenic 25.0%
!!! TATATAATGATGGATCATCT+TGG + Chr2:5200885-5200904 MsG0280006706.01.T01:intron 25.0%
!!! TCTAAAACCATTTTTCACAA+AGG - Chr2:5203049-5203068 None:intergenic 25.0%
!!! TGATTTCAAGTTTAATATCG+AGG - Chr2:5199299-5199318 None:intergenic 25.0%
!!! TGGAGCAGTTTTTTTTTTTT+TGG - Chr2:5201848-5201867 None:intergenic 25.0%
!!! TTTGCTTTTGAAGTTTATTG+AGG + Chr2:5203371-5203390 MsG0280006706.01.T01:CDS 25.0%
!!! TTTTTTTTTTGGATGGTACA+TGG - Chr2:5201837-5201856 None:intergenic 25.0%
AAAAAGAAGCTAATCATGTG+TGG + Chr2:5199104-5199123 MsG0280006706.01.T01:intron 30.0%
AAAGATGAAAATGGAAATGG+TGG + Chr2:5199629-5199648 MsG0280006706.01.T01:CDS 30.0%
AACTCTCTTGAATTTGTGAA+TGG - Chr2:5202761-5202780 None:intergenic 30.0%
AATACTAATATCCACTTGTC+CGG - Chr2:5200963-5200982 None:intergenic 30.0%
AATCCAGGTGAAATTTCATT+AGG + Chr2:5203156-5203175 MsG0280006706.01.T01:CDS 30.0%
ACAAATCACATATCTCTCTT+AGG - Chr2:5201235-5201254 None:intergenic 30.0%
ACGAAAAAACACAAACATCT+TGG - Chr2:5201115-5201134 None:intergenic 30.0%
ACTTCATTGATGAAACTTGT+TGG + Chr2:5197520-5197539 MsG0280006706.01.T01:CDS 30.0%
ACTTTCCCTTTCTATTACTT+TGG + Chr2:5202082-5202101 MsG0280006706.01.T01:intron 30.0%
AGAAATGGAAAATAGAGGAA+AGG - Chr2:5202445-5202464 None:intergenic 30.0%
AGAATCAGTTTGATGTAGAT+AGG - Chr2:5197098-5197117 None:intergenic 30.0%
AGAGTTAAAAAACACAAACG+TGG + Chr2:5202775-5202794 MsG0280006706.01.T01:intron 30.0%
AGCACTCACAACAATAAAAT+TGG - Chr2:5197190-5197209 None:intergenic 30.0%
AGTATTTACCTTATGGAAAG+CGG - Chr2:5197577-5197596 None:intergenic 30.0%
AGTTTAATATCGAGGATTAG+TGG - Chr2:5199291-5199310 None:intergenic 30.0%
AGTTTGTGAAGTAGAAGAAA+TGG - Chr2:5202460-5202479 None:intergenic 30.0%
ATAAGTAATTTCTTGGCTGA+TGG + Chr2:5198899-5198918 MsG0280006706.01.T01:intron 30.0%
ATATAAGACCCTACTAAAGA+TGG + Chr2:5200606-5200625 MsG0280006706.01.T01:intron 30.0%
ATATGTTAGATCATTGTGAG+TGG + Chr2:5196576-5196595 MsG0280006706.01.T01:five_prime_UTR 30.0%
ATATTAGTTCATATCCCCAA+AGG - Chr2:5197953-5197972 None:intergenic 30.0%
ATTCTTCTGTGGATAATTTG+TGG - Chr2:5198950-5198969 None:intergenic 30.0%
CAACAAAGCTCATAGATAAA+GGG + Chr2:5200788-5200807 MsG0280006706.01.T01:CDS 30.0%
CAACATGGTTGTAGTTAAAA+AGG + Chr2:5198817-5198836 MsG0280006706.01.T01:intron 30.0%
CAATCTAACCATCTTTAGTA+GGG - Chr2:5200617-5200636 None:intergenic 30.0%
CAGAAACCAAAGTAATAGAA+AGG - Chr2:5202091-5202110 None:intergenic 30.0%
CATCTTGAGATCATATTTGT+AGG - Chr2:5200818-5200837 None:intergenic 30.0%
CATGTTATTATTCTAGGTTG+AGG + Chr2:5198321-5198340 MsG0280006706.01.T01:intron 30.0%
CGAAAAAACACAAACATCTT+GGG - Chr2:5201114-5201133 None:intergenic 30.0%
CTAACAATTGTACGTAATGA+CGG + Chr2:5197854-5197873 MsG0280006706.01.T01:intron 30.0%
CTACCAAAAAAAAAAAGGGT+CGG + Chr2:5197743-5197762 MsG0280006706.01.T01:intron 30.0%
GAATCAGTTTGATGTAGATA+GGG - Chr2:5197097-5197116 None:intergenic 30.0%
GCGATCTTAGTATATAATGA+TGG + Chr2:5200875-5200894 MsG0280006706.01.T01:intron 30.0%
GCTCGATATATAACAAATCA+CGG + Chr2:5199537-5199556 MsG0280006706.01.T01:intron 30.0%
GGTAAAGATGAAAATGGAAA+TGG + Chr2:5199626-5199645 MsG0280006706.01.T01:CDS 30.0%
GGTTTAATCGGTTAATACAA+GGG + Chr2:5203127-5203146 MsG0280006706.01.T01:CDS 30.0%
GTAGAAGAAATGGAAAATAG+AGG - Chr2:5202450-5202469 None:intergenic 30.0%
GTATGTGCTTATTTGATCTA+AGG + Chr2:5199144-5199163 MsG0280006706.01.T01:intron 30.0%
TAAACATACAAAGGGTAAGT+AGG + Chr2:5198103-5198122 MsG0280006706.01.T01:intron 30.0%
TAAACTTCAAAAGCAAAGGA+TGG - Chr2:5203368-5203387 None:intergenic 30.0%
TAGTGGTAAAAACCACATAT+TGG - Chr2:5199274-5199293 None:intergenic 30.0%
TATATTGGTCAACCTTCATT+TGG + Chr2:5200934-5200953 MsG0280006706.01.T01:intron 30.0%
TCAACAAAGCTCATAGATAA+AGG + Chr2:5200787-5200806 MsG0280006706.01.T01:CDS 30.0%
TCAATCTAACCATCTTTAGT+AGG - Chr2:5200618-5200637 None:intergenic 30.0%
TCCAAATACCTAAAATCAGA+TGG - Chr2:5200739-5200758 None:intergenic 30.0%
TCGTTGATATAAGTGAATGT+TGG + Chr2:5197344-5197363 MsG0280006706.01.T01:intron 30.0%
TCTCTCTTGTATAAATTTGG+AGG + Chr2:5203207-5203226 MsG0280006706.01.T01:CDS 30.0%
TGAGATTCATTCAAAATGGT+TGG + Chr2:5203569-5203588 MsG0280006706.01.T01:CDS 30.0%
TGATATAAGTGAATGTTGGT+AGG + Chr2:5197348-5197367 MsG0280006706.01.T01:intron 30.0%
TGGTTTAATCGGTTAATACA+AGG + Chr2:5203126-5203145 MsG0280006706.01.T01:CDS 30.0%
! AACTACCAAATCGTAACTTT+TGG + Chr2:5199361-5199380 MsG0280006706.01.T01:intron 30.0%
! AAGTCAATGGATTCTGATAA+AGG + Chr2:5203006-5203025 MsG0280006706.01.T01:CDS 30.0%
! ACTATAACCAAACAAGCTTT+TGG - Chr2:5202982-5203001 None:intergenic 30.0%
! ATAAGTACCCATCTTTTTAG+AGG - Chr2:5200350-5200369 None:intergenic 30.0%
! ATTTGTGAATGGAGATTTTG+TGG - Chr2:5202750-5202769 None:intergenic 30.0%
! CGGACAATCAAATTTTTACA+AGG - Chr2:5202131-5202150 None:intergenic 30.0%
! CTATAACCAAACAAGCTTTT+GGG - Chr2:5202981-5203000 None:intergenic 30.0%
! CTGTCATAAACTTTTTACGT+TGG + Chr2:5200320-5200339 MsG0280006706.01.T01:intron 30.0%
! GATTATTATCAGTGATGGAA+AGG + Chr2:5196607-5196626 MsG0280006706.01.T01:exon 30.0%
! GGATAAAGAGTTTGTTTAGA+GGG + Chr2:5203538-5203557 MsG0280006706.01.T01:CDS 30.0%
! TTCTTCTGTGGATAATTTGT+GGG - Chr2:5198949-5198968 None:intergenic 30.0%
! TTTTGCCAAAAGTTACGATT+TGG - Chr2:5199369-5199388 None:intergenic 30.0%
!! AAATTGTATGTGTTGCTTCA+TGG - Chr2:5201655-5201674 None:intergenic 30.0%
!! GAATTTGCACTTACTTTTGA+TGG + Chr2:5203393-5203412 MsG0280006706.01.T01:CDS 30.0%
!! TACTTTTGATGGTAACAAGT+GGG + Chr2:5203404-5203423 MsG0280006706.01.T01:CDS 30.0%
!! TGGTTTTCTAAGAATGTTTC+TGG + Chr2:5199013-5199032 MsG0280006706.01.T01:intron 30.0%
!! TGTGATTTGTCCTATCTTTT+TGG + Chr2:5201245-5201264 MsG0280006706.01.T01:intron 30.0%
!! TTACTTTTGATGGTAACAAG+TGG + Chr2:5203403-5203422 MsG0280006706.01.T01:CDS 30.0%
!! TTATATTAGGGTGCTCTTTT+TGG + Chr2:5201322-5201341 MsG0280006706.01.T01:intron 30.0%
!!! CCAAGTCTTTTTTGAAAAAG+TGG - Chr2:5202832-5202851 None:intergenic 30.0%
!!! CCACTTTTTCAAAAAAGACT+TGG + Chr2:5202829-5202848 MsG0280006706.01.T01:intron 30.0%
!!! TTTCAGTTTTTTTGGTCCAA+AGG - Chr2:5201760-5201779 None:intergenic 30.0%
!!! TTTTGAAGTTGTGAAGAAAG+TGG - Chr2:5202486-5202505 None:intergenic 30.0%
!!! TTTTTTTGGTCCAAAGGAAT+TGG - Chr2:5201754-5201773 None:intergenic 30.0%
AAAAAAATGCAGAGAGGGAA+AGG - Chr2:5196757-5196776 None:intergenic 35.0%
AAAAAATGCAGAGAGGGAAA+GGG - Chr2:5196756-5196775 None:intergenic 35.0%
AAAGTTATGCAGTGCATCTT+TGG + Chr2:5203619-5203638 MsG0280006706.01.T01:CDS 35.0%
ACACACCCTAAAGATTTCAT+AGG + Chr2:5198565-5198584 MsG0280006706.01.T01:intron 35.0%
ACCAATCTTGTATTTGCATG+TGG - Chr2:5196992-5197011 None:intergenic 35.0%
AGAACAATGAACTAAAGCAG+TGG + Chr2:5198863-5198882 MsG0280006706.01.T01:intron 35.0%
AGAAGAGCAAAAAAGGATGT+TGG - Chr2:5202538-5202557 None:intergenic 35.0%
AGCATTCATGGATATTGTTC+AGG + Chr2:5199047-5199066 MsG0280006706.01.T01:intron 35.0%
AGGAATGTGAATGCAGAAAA+CGG - Chr2:5202593-5202612 None:intergenic 35.0%
AGTCAAACAGAGCAATCAAA+TGG + Chr2:5200761-5200780 MsG0280006706.01.T01:CDS 35.0%
ATCTTCCATAAGAGAAGAGA+AGG - Chr2:5202401-5202420 None:intergenic 35.0%
ATGCGGAATCATGGTTTAAT+CGG + Chr2:5203115-5203134 MsG0280006706.01.T01:CDS 35.0%
CCATTTGTTTGACAACCAAA+CGG - Chr2:5202151-5202170 None:intergenic 35.0%
CTAAGACCCTTTGTGAAAAA+TGG + Chr2:5203039-5203058 MsG0280006706.01.T01:CDS 35.0%
CTATCACCAAATGCTTTCAA+GGG - Chr2:5202922-5202941 None:intergenic 35.0%
CTTAGTATGATTCACAAGGT+TGG + Chr2:5200660-5200679 MsG0280006706.01.T01:intron 35.0%
CTTCACAAACATCATCAATG+TGG - Chr2:5199817-5199836 None:intergenic 35.0%
GAAAACAGAAGAAGAGAGTT+TGG - Chr2:5202671-5202690 None:intergenic 35.0%
GAGAATGAGAAGAGCAAAAA+AGG - Chr2:5202545-5202564 None:intergenic 35.0%
GGTTATAGTCTCAAAGTCAA+TGG + Chr2:5202993-5203012 MsG0280006706.01.T01:CDS 35.0%
GTCAAACAGAGCAATCAAAT+GGG + Chr2:5200762-5200781 MsG0280006706.01.T01:CDS 35.0%
GTGACTTAAACAATGCTTTG+AGG + Chr2:5198793-5198812 MsG0280006706.01.T01:intron 35.0%
GTTGTGCATAGTAAAATAGC+TGG - Chr2:5198404-5198423 None:intergenic 35.0%
TAACTATCACATGTAACTGC+CGG + Chr2:5201568-5201587 MsG0280006706.01.T01:intron 35.0%
TCCACATGCAAATACAAGAT+TGG + Chr2:5196988-5197007 MsG0280006706.01.T01:CDS 35.0%
TCTATCACCAAATGCTTTCA+AGG - Chr2:5202923-5202942 None:intergenic 35.0%
TGAAGTTTGAGAGACAATGT+GGG - Chr2:5202360-5202379 None:intergenic 35.0%
TGCGAGTAAAATCAATGACA+GGG - Chr2:5198685-5198704 None:intergenic 35.0%
TTGAACCTTCTCTTCTCTTA+TGG + Chr2:5202393-5202412 MsG0280006706.01.T01:intron 35.0%
TTGAAGTTTGAGAGACAATG+TGG - Chr2:5202361-5202380 None:intergenic 35.0%
TTGCGAGTAAAATCAATGAC+AGG - Chr2:5198686-5198705 None:intergenic 35.0%
TTGTAAATGCAATTCTCCGA+CGG - Chr2:5198541-5198560 None:intergenic 35.0%
TTTCCAAAAGCTTCTTGACT+AGG - Chr2:5196680-5196699 None:intergenic 35.0%
! AAATGGAAATGGTGGAATTG+AGG + Chr2:5199637-5199656 MsG0280006706.01.T01:CDS 35.0%
! AAATTTTGTGTCAGAGTGCA+AGG - Chr2:5202809-5202828 None:intergenic 35.0%
! AATACTCAAGTTTCTGAGAG+TGG - Chr2:5196721-5196740 None:intergenic 35.0%
! ACGAGAATCTAGAATGTGAT+TGG - Chr2:5201197-5201216 None:intergenic 35.0%
! ACTGCTTTAGTTCATTGTTC+TGG - Chr2:5198864-5198883 None:intergenic 35.0%
! AGAAGGGTATAATTTCAGTG+TGG + Chr2:5203479-5203498 MsG0280006706.01.T01:CDS 35.0%
! AGAATCTAGAATGTGATTGG+GGG - Chr2:5201194-5201213 None:intergenic 35.0%
! CGAGAATCTAGAATGTGATT+GGG - Chr2:5201196-5201215 None:intergenic 35.0%
! GAGAATCTAGAATGTGATTG+GGG - Chr2:5201195-5201214 None:intergenic 35.0%
! GGGATAAAGAGTTTGTTTAG+AGG + Chr2:5203537-5203556 MsG0280006706.01.T01:CDS 35.0%
! GTGAACATTTGAAGCATTCA+TGG + Chr2:5199035-5199054 MsG0280006706.01.T01:intron 35.0%
! GTTTCAGATTGATTCTTCTG+TGG - Chr2:5198961-5198980 None:intergenic 35.0%
! TCTACATCAAACTGATTCTC+AGG + Chr2:5197099-5197118 MsG0280006706.01.T01:CDS 35.0%
! TTTAGGGCTCTTCTAAATCT+TGG + Chr2:5198729-5198748 MsG0280006706.01.T01:intron 35.0%
!! ACTTTTGATGGTAACAAGTG+GGG + Chr2:5203405-5203424 MsG0280006706.01.T01:CDS 35.0%
!! AGAAGAAGAGAGTTTGGTTT+TGG - Chr2:5202665-5202684 None:intergenic 35.0%
!! AGTCAAGAAGCTTTTGGAAA+AGG + Chr2:5196680-5196699 MsG0280006706.01.T01:CDS 35.0%
!! ATCTTTGGAATAGGCAAAGT+AGG + Chr2:5203634-5203653 MsG0280006706.01.T01:CDS 35.0%
!! ATTTCACCCTTGAAAGCATT+TGG + Chr2:5202913-5202932 MsG0280006706.01.T01:intron 35.0%
!! CAGATTTGATAATGTCAAGC+CGG + Chr2:5200092-5200111 MsG0280006706.01.T01:intron 35.0%
!! GCCATCTGATTTTAGGTATT+TGG + Chr2:5200735-5200754 MsG0280006706.01.T01:intron 35.0%
!! GTCAAGAAGCTTTTGGAAAA+GGG + Chr2:5196681-5196700 MsG0280006706.01.T01:CDS 35.0%
!! TCTTTGGAATAGGCAAAGTA+GGG + Chr2:5203635-5203654 MsG0280006706.01.T01:CDS 35.0%
!! TTGGACTAGCTGTAAATATC+AGG - Chr2:5201735-5201754 None:intergenic 35.0%
!! TTTAGACATGGTGGATTCTA+GGG - Chr2:5199215-5199234 None:intergenic 35.0%
!!! AGACTTGGTGCATTTTTCAA+TGG + Chr2:5202844-5202863 MsG0280006706.01.T01:intron 35.0%
!!! GTGCTCTTTTTGGTTTACTA+GGG + Chr2:5201332-5201351 MsG0280006706.01.T01:intron 35.0%
!!! TGTCATTGATTTTACTCGCA+AGG + Chr2:5198685-5198704 MsG0280006706.01.T01:intron 35.0%
!!! TTGGTATTTTAGCTACAGCA+AGG + Chr2:5201264-5201283 MsG0280006706.01.T01:intron 35.0%
AAAACACTCATGCGGAATCA+TGG + Chr2:5203106-5203125 MsG0280006706.01.T01:CDS 40.0%
AATCAATGACAGGGACATGA+TGG - Chr2:5198676-5198695 None:intergenic 40.0%
AATTCACAGCCTTGAATTGC+TGG - Chr2:5197055-5197074 None:intergenic 40.0%
ACAGGATAAAATGCAGAAGG+TGG - Chr2:5203507-5203526 None:intergenic 40.0%
AGCAGTACTCAAGCTGAAAA+GGG + Chr2:5201957-5201976 MsG0280006706.01.T01:intron 40.0%
AGGGAGCTTAAGGTTGTTAA+AGG + Chr2:5203654-5203673 MsG0280006706.01.T01:CDS 40.0%
AGTAAAATAGCTGGATGCGT+TGG - Chr2:5198395-5198414 None:intergenic 40.0%
AGTGATCCTTGCACTAACAA+CGG + Chr2:5197889-5197908 MsG0280006706.01.T01:intron 40.0%
AGTTTGATGTAGATAGGGAG+TGG - Chr2:5197092-5197111 None:intergenic 40.0%
ATAATCACTGCAACACTTGC+GGG - Chr2:5199716-5199735 None:intergenic 40.0%
ATACAAGGGAATGTGAATCC+AGG + Chr2:5203141-5203160 MsG0280006706.01.T01:CDS 40.0%
ATAGTGTCAAATGCGGAAGA+AGG + Chr2:5200848-5200867 MsG0280006706.01.T01:intron 40.0%
ATCACGGTGAATCTCTTTGT+AGG + Chr2:5199553-5199572 MsG0280006706.01.T01:intron 40.0%
ATGTGTATCTTAGGATTCGC+GGG - Chr2:5199488-5199507 None:intergenic 40.0%
ATTGCTGGCCAAAAATCATC+TGG - Chr2:5197040-5197059 None:intergenic 40.0%
CAATGAACTAAAGCAGTGGA+AGG + Chr2:5198867-5198886 MsG0280006706.01.T01:intron 40.0%
CATGTGTATCTTAGGATTCG+CGG - Chr2:5199489-5199508 None:intergenic 40.0%
CCGTTTGGTTGTCAAACAAA+TGG + Chr2:5202148-5202167 MsG0280006706.01.T01:intron 40.0%
CGAATCCTAAGATACACATG+TGG + Chr2:5199489-5199508 MsG0280006706.01.T01:intron 40.0%
CTAGACGATAGTGTCAAATG+CGG + Chr2:5200841-5200860 MsG0280006706.01.T01:intron 40.0%
CTAGAGTAAGTGGAAGAGAA+GGG + Chr2:5203463-5203482 MsG0280006706.01.T01:CDS 40.0%
GAACACCACATGTGTATCTT+AGG - Chr2:5199497-5199516 None:intergenic 40.0%
GAGCAAAAAAGGATGTTGGT+AGG - Chr2:5202534-5202553 None:intergenic 40.0%
GATAATCACTGCAACACTTG+CGG - Chr2:5199717-5199736 None:intergenic 40.0%
GATCTAATGGTCAAGATGAG+TGG - Chr2:5198373-5198392 None:intergenic 40.0%
GTACGCTTATTCCAAGACAT+TGG + Chr2:5199577-5199596 MsG0280006706.01.T01:CDS 40.0%
TACAGCTAGTCCAATTCCTT+TGG + Chr2:5201741-5201760 MsG0280006706.01.T01:intron 40.0%
TAGCAGTACTCAAGCTGAAA+AGG + Chr2:5201956-5201975 MsG0280006706.01.T01:intron 40.0%
TCCACAGGATAAAATGCAGA+AGG - Chr2:5203510-5203529 None:intergenic 40.0%
TGGCCTAATGAAATTTCACC+TGG - Chr2:5203162-5203181 None:intergenic 40.0%
! ACCTTCTGCATTTTATCCTG+TGG + Chr2:5203506-5203525 MsG0280006706.01.T01:CDS 40.0%
! AGGACAGTTTAAGAGCATAG+AGG + Chr2:5197368-5197387 MsG0280006706.01.T01:intron 40.0%
! ATGGAGATTTTGTGGAGAAG+AGG - Chr2:5202742-5202761 None:intergenic 40.0%
! CTGCATTTTATCCTGTGGAT+TGG + Chr2:5203511-5203530 MsG0280006706.01.T01:CDS 40.0%
! GTCAACCTTCATTTGGTTTC+CGG + Chr2:5200941-5200960 MsG0280006706.01.T01:intron 40.0%
! TAGCCAATAAACTTGCTTGC+TGG - Chr2:5201891-5201910 None:intergenic 40.0%
! TCTAGAGTAAGTGGAAGAGA+AGG + Chr2:5203462-5203481 MsG0280006706.01.T01:CDS 40.0%
! TCTCCTAGTCAAGAAGCTTT+TGG + Chr2:5196674-5196693 MsG0280006706.01.T01:CDS 40.0%
! TGGAGATTTTGTGGAGAAGA+GGG - Chr2:5202741-5202760 None:intergenic 40.0%
! TGGTCTGCCTCTAAAAAGAT+GGG + Chr2:5200340-5200359 MsG0280006706.01.T01:intron 40.0%
! TGTCAGAGTGCAAGGTTTTT+AGG - Chr2:5202801-5202820 None:intergenic 40.0%
! TGTTGGTAGGTTGAAGAGAA+TGG - Chr2:5202521-5202540 None:intergenic 40.0%
! TTACTCGCAAGGTGCTTAAA+TGG + Chr2:5198696-5198715 MsG0280006706.01.T01:intron 40.0%
! TTGGTCTGCCTCTAAAAAGA+TGG + Chr2:5200339-5200358 MsG0280006706.01.T01:intron 40.0%
!! ACAATGCTTTGAGGTCAACA+TGG + Chr2:5198802-5198821 MsG0280006706.01.T01:intron 40.0%
!! ACATCATCAATGTGGACTAG+TGG - Chr2:5199809-5199828 None:intergenic 40.0%
!! AGAGTGGTTTCTAGAGTAAG+TGG + Chr2:5203453-5203472 MsG0280006706.01.T01:CDS 40.0%
!! ATGCAGTGCATCTTTGGAAT+AGG + Chr2:5203625-5203644 MsG0280006706.01.T01:CDS 40.0%
!! CTTTAGACATGGTGGATTCT+AGG - Chr2:5199216-5199235 None:intergenic 40.0%
!! CTTTTGATGGTAACAAGTGG+GGG + Chr2:5203406-5203425 MsG0280006706.01.T01:CDS 40.0%
!! TTTATCCTGTGGATTGGAGA+GGG + Chr2:5203517-5203536 MsG0280006706.01.T01:CDS 40.0%
!!! AATTCTCCGACGGACTTTTT+TGG - Chr2:5198531-5198550 None:intergenic 40.0%
!!! AGTTTGGTTTTGGTGTGTGA+TGG - Chr2:5202655-5202674 None:intergenic 40.0%
!!! GATTTTTGGCCAGCAATTCA+AGG + Chr2:5197043-5197062 MsG0280006706.01.T01:CDS 40.0%
!!! GGTGCTCTTTTTGGTTTACT+AGG + Chr2:5201331-5201350 MsG0280006706.01.T01:intron 40.0%
!!! TGGCCGACCCTTTTTTTTTT+TGG - Chr2:5197749-5197768 None:intergenic 40.0%
!!! TTTTATCCTGTGGATTGGAG+AGG + Chr2:5203516-5203535 MsG0280006706.01.T01:CDS 40.0%
AAGAAGGAGAGGTTTGTGTG+GGG - Chr2:5202626-5202645 None:intergenic 45.0%
ACACCGGTGAGGGATTTAAT+TGG - Chr2:5198349-5198368 None:intergenic 45.0%
ACACTGGTGAGGGACTTAAT+TGG + Chr2:5199182-5199201 MsG0280006706.01.T01:intron 45.0%
CACCTAATTGTCTCACTCAC+CGG - Chr2:5200114-5200133 None:intergenic 45.0%
CATGGATATTGTTCAGGCTG+TGG + Chr2:5199053-5199072 MsG0280006706.01.T01:intron 45.0%
CCATTACCTCCCATGATTTC+CGG + Chr2:5201865-5201884 MsG0280006706.01.T01:intron 45.0%
CTTCTCCACTGAAGGATGAT+GGG + Chr2:5197484-5197503 MsG0280006706.01.T01:CDS 45.0%
CTTGTCCGGAAACCAAATGA+AGG - Chr2:5200949-5200968 None:intergenic 45.0%
GAAGAAGGAGAGGTTTGTGT+GGG - Chr2:5202627-5202646 None:intergenic 45.0%
GACAATGTGGGAGAGAATAG+TGG - Chr2:5202348-5202367 None:intergenic 45.0%
GATCTAAGGGTCAAGATGAG+TGG + Chr2:5199158-5199177 MsG0280006706.01.T01:intron 45.0%
GCGAGAAGACTGATATACAC+TGG + Chr2:5197447-5197466 MsG0280006706.01.T01:CDS 45.0%
GGAATTGAGGTGGTTACTCT+TGG + Chr2:5199650-5199669 MsG0280006706.01.T01:CDS 45.0%
GGTCCAATTAAATCCCTCAC+CGG + Chr2:5198343-5198362 MsG0280006706.01.T01:intron 45.0%
GTGATCCTTGCACTAACAAC+GGG + Chr2:5197890-5197909 MsG0280006706.01.T01:intron 45.0%
TAGAATGTGATTGGGGGTTG+AGG - Chr2:5201188-5201207 None:intergenic 45.0%
TAGGCAAAGTAGGGAGCTTA+AGG + Chr2:5203644-5203663 MsG0280006706.01.T01:CDS 45.0%
TCCAAAGTCAGCTTTCTGAG+AGG + Chr2:5196962-5196981 MsG0280006706.01.T01:CDS 45.0%
TGATCCTTGCACTAACAACG+GGG + Chr2:5197891-5197910 MsG0280006706.01.T01:intron 45.0%
TGTCAAATGCGGAAGAAGGA+CGG + Chr2:5200852-5200871 MsG0280006706.01.T01:intron 45.0%
TGTGTATCTTAGGATTCGCG+GGG - Chr2:5199487-5199506 None:intergenic 45.0%
TTCATATCCCCAAAGGACGT+GGG - Chr2:5197946-5197965 None:intergenic 45.0%
TTCTCTCTCTGCCAATGTCT+TGG - Chr2:5199591-5199610 None:intergenic 45.0%
TTGATATGGAGACACTCCGT+AGG + Chr2:5200989-5201008 MsG0280006706.01.T01:intron 45.0%
TTTATCCCTCTCCAATCCAC+AGG - Chr2:5203525-5203544 None:intergenic 45.0%
TTTGGGCGACCCTTTATGTA+TGG - Chr2:5197720-5197739 None:intergenic 45.0%
! CAATAAACTTGCTTGCTGGC+CGG - Chr2:5201887-5201906 None:intergenic 45.0%
! CACTGGATAGTGGTGCATTT+GGG - Chr2:5198475-5198494 None:intergenic 45.0%
! GTCACACCCAAAAGCTTGTT+TGG + Chr2:5202972-5202991 MsG0280006706.01.T01:CDS 45.0%
! TCAAGTTTCTGAGAGTGGCA+TGG - Chr2:5196716-5196735 None:intergenic 45.0%
! TCACTGGATAGTGGTGCATT+TGG - Chr2:5198476-5198495 None:intergenic 45.0%
! TCATTTGGTTTCCGGACAAG+TGG + Chr2:5200949-5200968 MsG0280006706.01.T01:intron 45.0%
! TGGAAATGGTGGAATTGAGG+TGG + Chr2:5199640-5199659 MsG0280006706.01.T01:CDS 45.0%
! TTCTGTTTTCTTCGCTCGCA+AGG + Chr2:5202681-5202700 MsG0280006706.01.T01:intron 45.0%
!! ACAGGTGGTGCTGGTTATAT+TGG + Chr2:5196648-5196667 MsG0280006706.01.T01:CDS 45.0%
!!! CTTTTTTGGTGGCAGTGTCA+TGG - Chr2:5198517-5198536 None:intergenic 45.0%
!!! TTGGTTTTGGTGTGTGATGG+AGG - Chr2:5202652-5202671 None:intergenic 45.0%
!! ATATTTAATTAAAAAATGAA+CGG - Chr2:5196864-5196883 None:intergenic 5.0%
AACACCCAATCCGATCCACA+TGG + Chr2:5200394-5200413 MsG0280006706.01.T01:intron 50.0%
ACATGTAACTGCCGGTGGTT+GGG + Chr2:5201576-5201595 MsG0280006706.01.T01:intron 50.0%
ACCTTATGGAAAGCGGTGAG+AGG - Chr2:5197570-5197589 None:intergenic 50.0%
ACTGATATACACTGGCACCG+TGG + Chr2:5197455-5197474 MsG0280006706.01.T01:CDS 50.0%
AGATGAGTGGTACACTGGTG+AGG + Chr2:5199171-5199190 MsG0280006706.01.T01:intron 50.0%
AGCCGGTGAGTGAGACAATT+AGG + Chr2:5200109-5200128 MsG0280006706.01.T01:intron 50.0%
AGCTGCAAGGTGTGTGTTAC+AGG + Chr2:5196630-5196649 MsG0280006706.01.T01:CDS 50.0%
ATAGAGGAAGCAGCAGTAGC+AGG + Chr2:5197384-5197403 MsG0280006706.01.T01:CDS 50.0%
CCGGAAATCATGGGAGGTAA+TGG - Chr2:5201868-5201887 None:intergenic 50.0%
CGGCCAGCAAGCAAGTTTAT+TGG + Chr2:5201885-5201904 MsG0280006706.01.T01:intron 50.0%
CTATCACATGTAACTGCCGG+TGG + Chr2:5201571-5201590 MsG0280006706.01.T01:intron 50.0%
CTCATGTGTGCCATGTGGAT+CGG - Chr2:5200407-5200426 None:intergenic 50.0%
CTGCCACCAAAAAAGTCCGT+CGG + Chr2:5198522-5198541 MsG0280006706.01.T01:intron 50.0%
CTTACCTCATGTGTGCCATG+TGG - Chr2:5200412-5200431 None:intergenic 50.0%
CTTAGGATTCGCGGGGAATT+TGG - Chr2:5199480-5199499 None:intergenic 50.0%
GATCCTTGCACTAACAACGG+GGG + Chr2:5197892-5197911 MsG0280006706.01.T01:intron 50.0%
GATGAGTGGTACACTGGTGA+GGG + Chr2:5199172-5199191 MsG0280006706.01.T01:intron 50.0%
GCTGGATGCGTTGGATCTAA+TGG - Chr2:5198386-5198405 None:intergenic 50.0%
GCTTCTCCACTGAAGGATGA+TGG + Chr2:5197483-5197502 MsG0280006706.01.T01:CDS 50.0%
GGAAGAAGGAGAGGTTTGTG+TGG - Chr2:5202628-5202647 None:intergenic 50.0%
GGTCAAGATGAGTGGTACAC+CGG - Chr2:5199185-5199166 None:intergenic 50.0%
GGTCAAGATGAGTGGTACAC+TGG + Chr2:5199166-5199185 MsG0280006706.01.T01:intron 50.0%
GGTGGTAGTTCACTGGATAG+TGG - Chr2:5198485-5198504 None:intergenic 50.0%
GTAGATAGGGAGTGGCAACA+TGG - Chr2:5197084-5197103 None:intergenic 50.0%
GTCAAATGCGGAAGAAGGAC+GGG + Chr2:5200853-5200872 MsG0280006706.01.T01:intron 50.0%
GTTCATATCCCCAAAGGACG+TGG - Chr2:5197947-5197966 None:intergenic 50.0%
TATGGAAAGCGGTGAGAGGA+AGG - Chr2:5197566-5197585 None:intergenic 50.0%
TCCTCTCACCGCTTTCCATA+AGG + Chr2:5197566-5197585 MsG0280006706.01.T01:CDS 50.0%
TGCAAGGTGTGTGTTACAGG+TGG + Chr2:5196633-5196652 MsG0280006706.01.T01:CDS 50.0%
TGGGACTTGGGGTTGTATGT+GGG + Chr2:5201595-5201614 MsG0280006706.01.T01:intron 50.0%
TGGTTGAACCCACGTCCTTT+GGG + Chr2:5197935-5197954 MsG0280006706.01.T01:intron 50.0%
TGTGCCATGTGGATCGGATT+GGG - Chr2:5200401-5200420 None:intergenic 50.0%
TTGGGACTTGGGGTTGTATG+TGG + Chr2:5201594-5201613 MsG0280006706.01.T01:intron 50.0%
! AGTGATGGAAAGGAGCTGCA+AGG + Chr2:5196617-5196636 MsG0280006706.01.T01:exon 50.0%
! GAGGTGGTTACTCTTGGTGT+TGG + Chr2:5199656-5199675 MsG0280006706.01.T01:CDS 50.0%
! GATAGTGGTGCATTTGGGTG+AGG - Chr2:5198470-5198489 None:intergenic 50.0%
! GCAGTGTCATGGATAGTGGT+TGG - Chr2:5198506-5198525 None:intergenic 50.0%
! GCCTCTCAGAAAGCTGACTT+TGG - Chr2:5196966-5196985 None:intergenic 50.0%
! GGGAGAGAATAGTGGAGAGT+GGG - Chr2:5202340-5202359 None:intergenic 50.0%
! GGTAACAAGTGGGGGCATAA+TGG + Chr2:5203414-5203433 MsG0280006706.01.T01:CDS 50.0%
! GTGTCATGGATAGTGGTTGG+TGG - Chr2:5198503-5198522 None:intergenic 50.0%
! TGGGAGAGAATAGTGGAGAG+TGG - Chr2:5202341-5202360 None:intergenic 50.0%
! TGTGTGATGGAGGTGGAAGA+AGG - Chr2:5202642-5202661 None:intergenic 50.0%
! TTGTGTGGGGAGTGATAACG+AGG - Chr2:5202613-5202632 None:intergenic 50.0%
!! ACATGGTGGATTCTAGGGTG+AGG - Chr2:5199210-5199229 None:intergenic 50.0%
!! ACTCTTGGTGTTGGCCTAGT+GGG + Chr2:5199665-5199684 MsG0280006706.01.T01:CDS 50.0%
!! AGTGGTTGGTGGTAGTTCAC+TGG - Chr2:5198492-5198511 None:intergenic 50.0%
!! CATGGTGGATTCTAGGGTGA+GGG - Chr2:5199209-5199228 None:intergenic 50.0%
!! GTGTTGTTTCGCTATCCGCT+CGG + Chr2:5201912-5201931 MsG0280006706.01.T01:intron 50.0%
!! GTTTTGGTGTGTGATGGAGG+TGG - Chr2:5202649-5202668 None:intergenic 50.0%
!! TACTCTTGGTGTTGGCCTAG+TGG + Chr2:5199664-5199683 MsG0280006706.01.T01:CDS 50.0%
!! TGTTGTTTCGCTATCCGCTC+GGG + Chr2:5201913-5201932 MsG0280006706.01.T01:intron 50.0%
!!! TCTCCGACGGACTTTTTTGG+TGG - Chr2:5198528-5198547 None:intergenic 50.0%
AGATGAGTGGTACACCGGTG+AGG - Chr2:5198360-5198379 None:intergenic 55.0%
CAACCCCCGTTGTTAGTGCA+AGG - Chr2:5197898-5197917 None:intergenic 55.0%
CACATGTAACTGCCGGTGGT+TGG + Chr2:5201575-5201594 MsG0280006706.01.T01:intron 55.0%
CAGTGGAGAAGCAGCAACCA+CGG - Chr2:5197475-5197494 None:intergenic 55.0%
CCACTCCCATCATCCTTCAG+TGG - Chr2:5197492-5197511 None:intergenic 55.0%
CCGAAAGAATGTGTCCCGAG+CGG - Chr2:5201930-5201949 None:intergenic 55.0%
CCGCTCGGGACACATTCTTT+CGG + Chr2:5201927-5201946 MsG0280006706.01.T01:intron 55.0%
CGATCCACATGGCACACATG+AGG + Chr2:5200405-5200424 MsG0280006706.01.T01:intron 55.0%
CGCTCGGGACACATTCTTTC+GGG + Chr2:5201928-5201947 MsG0280006706.01.T01:intron 55.0%
GATGAGTGGTACACCGGTGA+GGG - Chr2:5198359-5198378 None:intergenic 55.0%
GATGGAGGTGGAAGAAGGAG+AGG - Chr2:5202637-5202656 None:intergenic 55.0%
GGTGGCAGTGTCATGGATAG+TGG - Chr2:5198510-5198529 None:intergenic 55.0%
GGTTGAACCCACGTCCTTTG+GGG + Chr2:5197936-5197955 MsG0280006706.01.T01:intron 55.0%
GTGATTGGGGGTTGAGGCAA+GGG - Chr2:5201182-5201201 None:intergenic 55.0%
GTGGTTGAACCCACGTCCTT+TGG + Chr2:5197934-5197953 MsG0280006706.01.T01:intron 55.0%
GTGTGCCATGTGGATCGGAT+TGG - Chr2:5200402-5200421 None:intergenic 55.0%
GTGTGTGTTACAGGTGGTGC+TGG + Chr2:5196639-5196658 MsG0280006706.01.T01:CDS 55.0%
TGAGAGGAAGGTGGAGACTC+TGG - Chr2:5197554-5197573 None:intergenic 55.0%
TGTGATTGGGGGTTGAGGCA+AGG - Chr2:5201183-5201202 None:intergenic 55.0%
TTCAACCACCACACGAGCGT+GGG - Chr2:5197923-5197942 None:intergenic 55.0%
! GCTTGCTGGCCGGAAATCAT+GGG - Chr2:5201877-5201896 None:intergenic 55.0%
! GGTTGCTGCTTCTCCACTGA+AGG + Chr2:5197476-5197495 MsG0280006706.01.T01:CDS 55.0%
! TGCTTGCTGGCCGGAAATCA+TGG - Chr2:5201878-5201897 None:intergenic 55.0%
!! CCACTGAAGGATGATGGGAG+TGG + Chr2:5197489-5197508 MsG0280006706.01.T01:CDS 55.0%
!! GAAGAGCATCTCCTCCCACT+AGG - Chr2:5199682-5199701 None:intergenic 55.0%
AACTGCCGGTGGTTGGGACT+TGG + Chr2:5201582-5201601 MsG0280006706.01.T01:intron 60.0%
ACTGCCGGTGGTTGGGACTT+GGG + Chr2:5201583-5201602 MsG0280006706.01.T01:intron 60.0%
CAACCCCAAGTCCCAACCAC+CGG - Chr2:5201590-5201609 None:intergenic 60.0%
GGAAAGCGGTGAGAGGAAGG+TGG - Chr2:5197563-5197582 None:intergenic 60.0%
GTTCAACCACCACACGAGCG+TGG - Chr2:5197924-5197943 None:intergenic 60.0%
TGCTGGCCGGAAATCATGGG+AGG - Chr2:5201874-5201893 None:intergenic 60.0%
TTGAACCCACGCTCGTGTGG+TGG + Chr2:5197915-5197934 MsG0280006706.01.T01:intron 60.0%
! GGAAGGTGGAGACTCTGGAG+AGG - Chr2:5197549-5197568 None:intergenic 60.0%
!! CTTGGTGTTGGCCTAGTGGG+AGG + Chr2:5199668-5199687 MsG0280006706.01.T01:CDS 60.0%
CTGCCGGTGGTTGGGACTTG+GGG + Chr2:5201584-5201603 MsG0280006706.01.T01:intron 65.0%
GGGTTGAACCCACGCTCGTG+TGG + Chr2:5197912-5197931 MsG0280006706.01.T01:intron 65.0%
GGGGGTTGAGGCAAGGGCAG+AGG - Chr2:5201176-5201195 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 5196560 5203731 5196560 ID=MsG0280006706.01;Name=MsG0280006706.01
Chr2 mRNA 5196560 5203731 5196560 ID=MsG0280006706.01.T01;Parent=MsG0280006706.01;Name=MsG0280006706.01.T01;_AED=0.36;_eAED=0.36;_QI=61|0.8|0.66|1|1|1|6|0|586
Chr2 exon 5196560 5196735 5196560 ID=MsG0280006706.01.T01:exon:2050;Parent=MsG0280006706.01.T01
Chr2 exon 5196954 5197120 5196954 ID=MsG0280006706.01.T01:exon:2051;Parent=MsG0280006706.01.T01
Chr2 exon 5197375 5197587 5197375 ID=MsG0280006706.01.T01:exon:2052;Parent=MsG0280006706.01.T01
Chr2 exon 5199575 5199963 5199575 ID=MsG0280006706.01.T01:exon:2053;Parent=MsG0280006706.01.T01
Chr2 exon 5200750 5200850 5200750 ID=MsG0280006706.01.T01:exon:2054;Parent=MsG0280006706.01.T01
Chr2 exon 5202956 5203731 5202956 ID=MsG0280006706.01.T01:exon:2055;Parent=MsG0280006706.01.T01
Chr2 five_prime_UTR 5196560 5196620 5196560 ID=MsG0280006706.01.T01:five_prime_utr;Parent=MsG0280006706.01.T01
Chr2 CDS 5196621 5196735 5196621 ID=MsG0280006706.01.T01:cds;Parent=MsG0280006706.01.T01
Chr2 CDS 5196954 5197120 5196954 ID=MsG0280006706.01.T01:cds;Parent=MsG0280006706.01.T01
Chr2 CDS 5197375 5197587 5197375 ID=MsG0280006706.01.T01:cds;Parent=MsG0280006706.01.T01
Chr2 CDS 5199575 5199963 5199575 ID=MsG0280006706.01.T01:cds;Parent=MsG0280006706.01.T01
Chr2 CDS 5200750 5200850 5200750 ID=MsG0280006706.01.T01:cds;Parent=MsG0280006706.01.T01
Chr2 CDS 5202956 5203731 5202956 ID=MsG0280006706.01.T01:cds;Parent=MsG0280006706.01.T01
Gene Sequence

>MsG0280006706.01.T01

ATGGAAAGGAGCTGCAAGGTGTGTGTTACAGGTGGTGCTGGTTATATTGGCTCTCTCCTAGTCAAGAAGCTTTTGGAAAAGGGATACACTGTCCATGCCACTCTCAGAAACTTGAAGGACGAGTCCAAAGTCAGCTTTCTGAGAGGCTTTCCACATGCAAATACAAGATTGGTGTTATTTGAAGCTGACATCTATAAACCAGATGATTTTTGGCCAGCAATTCAAGGCTGTGAATTTGTCTTCCATGTTGCCACTCCCTATCTACATCAAACTGATTCTCAGTTTAAGAGCATAGAGGAAGCAGCAGTAGCAGGTGTAAAAAGCATAGCTGAGACTTGTATTAAATCAAAAACAGCGAGAAGACTGATATACACTGGCACCGTGGTTGCTGCTTCTCCACTGAAGGATGATGGGAGTGGTTACAAAGACTTCATTGATGAAACTTGTTGGACTCCTCTCCAGAGTCTCCACCTTCCTCTCACCGCTTTCCATAAGGAGTACGCTTATTCCAAGACATTGGCAGAGAGAGAATTATTAACGAGTTATGGTAAAGATGAAAATGGAAATGGTGGAATTGAGGTGGTTACTCTTGGTGTTGGCCTAGTGGGAGGAGATGCTCTTCTCAGTTACTTACCCGCAAGTGTTGCAGTGATTATCTCTCAGCTTCAAGACAATGAAGTTGCATATCAGTCTATGAAGTTCTTAGAAGATATAGATGGAAAAATTCCACTAGTCCACATTGATGATGTTTGTGAAGCTCATATCTTTTGTGCTGAAGATTCATCTATCAATGACAGATTTTTGGTTGCAAGCTCATATGCATCATCAGCAGAGATAGCAAATTATTATCTTCAAAACTATCCAGAATTCAATTTGAAAGAGAAGTATTTGGAAGAGTCAAACAGAGCAATCAAATGGGCATCAACAAAGCTCATAGATAAAGGGTTTTCCTACAAATATGATCTCAAGATGATACTAGACGATATCGAAAGCTTGTTCAAGTCACACCCAAAAGCTTGTTTGGTTATAGTCTCAAAGTCAATGGATTCTGATAAAGGAACTCAAATTCTAAGACCCTTTGTGAAAAATGGTTTTAGAGTGACTGCTATTGAACCTGATTTCAACTATATATTCAAAAACACTCATGCGGAATCATGGTTTAATCGGTTAATACAAGGGAATGTGAATCCAGGTGAAATTTCATTAGGCCAAAACCTCTCAAATTTACTTAGACTTTCTCTCTTGTATAAATTTGGAGGCATTTACATAGATGCTGATATAATAATCTTGAAAAGTTTTTCAAATCTAAGAAACACTATTGGAGCACAAAACATTGATGTGAAAACAAAGAAATGGAGTCGTTTGAACAATGCTGTGTTGATATTTGATAAAAACCATCCTTTGCTTTTGAAGTTTATTGAGGAATTTGCACTTACTTTTGATGGTAACAAGTGGGGGCATAATGGTCCTTATTTAATATCTAGAGTGGTTTCTAGAGTAAGTGGAAGAGAAGGGTATAATTTCAGTGTGGTTCCACCTTCTGCATTTTATCCTGTGGATTGGAGAGGGATAAAGAGTTTGTTTAGAGGGCCTAAAGATGAGATTCATTCAAAATGGTTGGTTAAGAAAATGGAGCAAATTAGAGAAGAAAGTTATGCAGTGCATCTTTGGAATAGGCAAAGTAGGGAGCTTAAGGTTGTTAAAGGAAGTATTATTGATAGTATCATATCTAGTTGTTGCATTTTTCGCAACACTTATTAG

Protein sequence

>MsG0280006706.01.T01

MERSCKVCVTGGAGYIGSLLVKKLLEKGYTVHATLRNLKDESKVSFLRGFPHANTRLVLFEADIYKPDDFWPAIQGCEFVFHVATPYLHQTDSQFKSIEEAAVAGVKSIAETCIKSKTARRLIYTGTVVAASPLKDDGSGYKDFIDETCWTPLQSLHLPLTAFHKEYAYSKTLAERELLTSYGKDENGNGGIEVVTLGVGLVGGDALLSYLPASVAVIISQLQDNEVAYQSMKFLEDIDGKIPLVHIDDVCEAHIFCAEDSSINDRFLVASSYASSAEIANYYLQNYPEFNLKEKYLEESNRAIKWASTKLIDKGFSYKYDLKMILDDIESLFKSHPKACLVIVSKSMDSDKGTQILRPFVKNGFRVTAIEPDFNYIFKNTHAESWFNRLIQGNVNPGEISLGQNLSNLLRLSLLYKFGGIYIDADIIILKSFSNLRNTIGAQNIDVKTKKWSRLNNAVLIFDKNHPLLLKFIEEFALTFDGNKWGHNGPYLISRVVSRVSGREGYNFSVVPPSAFYPVDWRGIKSLFRGPKDEIHSKWLVKKMEQIREESYAVHLWNRQSRELKVVKGSIIDSIISSCCIFRNTY*