AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007754.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007754.01.T01 MTR_1g110980 46.086 792 365 10 48 787 142 923 0.0 728
MsG0280007754.01.T01 MTR_1g111000 46.221 807 358 12 48 787 139 936 0.0 718
MsG0280007754.01.T01 MTR_5g057990 45.019 793 376 9 48 787 140 925 0.0 707
MsG0280007754.01.T01 MTR_3g096870 32.671 554 331 13 180 724 339 859 4.33e-82 281
MsG0280007754.01.T01 MTR_5g026610 30.103 681 366 23 73 709 69 683 4.44e-80 276
MsG0280007754.01.T01 MTR_5g026610 29.883 686 371 23 73 714 132 751 4.83e-80 277
MsG0280007754.01.T01 MTR_5g026610 30.103 681 366 23 73 709 69 683 8.62e-80 276
MsG0280007754.01.T01 MTR_5g026610 29.883 686 371 23 73 714 132 751 1.07e-79 277
MsG0280007754.01.T01 MTR_5g026610 30.103 681 366 23 73 709 172 786 3.66e-79 276
MsG0280007754.01.T01 MTR_5g026610 32.064 499 266 16 231 709 2 447 5.26e-67 237
MsG0280007754.01.T01 MTR_6g014900 82.456 57 10 0 502 558 77 133 1.25e-24 100
MsG0280007754.01.T01 MTR_7g089780 27.178 287 169 12 382 635 578 857 5.51e-16 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007754.01.T01 AT5G11720 64.062 768 241 7 47 787 142 901 0.0 1013
MsG0280007754.01.T01 AT1G68560 46.776 791 356 10 48 787 136 912 0.0 735
MsG0280007754.01.T01 AT3G45940 46.104 770 341 10 48 787 127 852 0.0 699
MsG0280007754.01.T01 AT5G63840 31.633 686 364 23 98 724 226 865 2.92e-88 298
MsG0280007754.01.T01 AT5G63840 31.633 686 364 23 98 724 253 892 8.30e-88 298
MsG0280007754.01.T01 AT3G23640 30.909 660 343 22 93 706 83 675 5.20e-83 285
MsG0280007754.01.T01 AT3G23640 30.909 660 343 22 93 706 83 675 5.20e-83 285
MsG0280007754.01.T01 AT3G23640 30.909 660 343 22 93 706 152 744 5.46e-83 286

Find 166 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTAATAGTCAAGAATTT+TGG 0.071894 2:-20076179 MsG0280007754.01.T01:CDS
TGAAACATTTCTAGTCTTTA+AGG 0.082654 2:-20078076 MsG0280007754.01.T01:CDS
CCTAATTATGGTAGGTTAAA+TGG 0.142786 2:-20074671 MsG0280007754.01.T01:CDS
TAAGGCCTTGTTGGTTGTTT+TGG 0.171983 2:+20075912 None:intergenic
CAAACCAAACTTTCACTCTT+TGG 0.188927 2:-20077960 MsG0280007754.01.T01:CDS
TTAAAGACTAGAAATGTTTC+AGG 0.191590 2:+20078078 None:intergenic
CCTATGCCTTATTGGTCTTT+TGG 0.203546 2:-20077665 MsG0280007754.01.T01:intron
CATACTTTCCTAAAGGAAAT+TGG 0.207731 2:-20075078 MsG0280007754.01.T01:CDS
CCATTTAACCTACCATAATT+AGG 0.210385 2:+20074671 None:intergenic
ATATTGAACTTTGGAATCTT+TGG 0.211841 2:-20075760 MsG0280007754.01.T01:CDS
GGCCTGCTCCTATGCCTTAT+TGG 0.219189 2:-20077673 MsG0280007754.01.T01:CDS
TCAAATTTAAAACAGCTTAT+AGG 0.237471 2:-20074536 MsG0280007754.01.T01:CDS
CCAGCAACATCTTTACATTA+TGG 0.237583 2:-20075982 MsG0280007754.01.T01:CDS
GCCCAAAATTCTTGACTATT+AGG 0.243019 2:+20076177 None:intergenic
AATGTTGATGTGAATCTTTA+TGG 0.246990 2:-20077916 MsG0280007754.01.T01:CDS
AGAGCTTCTCTGTATGGTTT+TGG 0.249948 2:-20078015 MsG0280007754.01.T01:CDS
TAGTTATGGACAAGTTTATT+TGG 0.260726 2:-20074861 MsG0280007754.01.T01:CDS
TTTCTCACATCCAAATAAAA+TGG 0.270492 2:+20077886 None:intergenic
TTTGACATATTTGCCTGATT+TGG 0.275973 2:+20075021 None:intergenic
ACTATGTCGGCGCTGGATTC+AGG 0.280579 2:-20075683 MsG0280007754.01.T01:intron
ATCTCTTGCAAAGGGGTAAA+AGG 0.281980 2:+20075372 None:intergenic
TGTTGGCGAAGGTAACATTT+TGG 0.289442 2:-20074966 MsG0280007754.01.T01:CDS
CATTCCAAAGAGTGAAAGTT+TGG 0.290677 2:+20077956 None:intergenic
AGAAATGTTTCAGGGTTTAA+AGG 0.291288 2:+20078087 None:intergenic
CATAGAAAAGGTTACATTCT+TGG 0.292151 2:-20074699 MsG0280007754.01.T01:CDS
AGATCAAACCAATTTCCTTT+AGG 0.302482 2:+20075070 None:intergenic
TACATTAGTGTGTAGAAATA+TGG 0.304092 2:+20075253 None:intergenic
ACTCTTGGAATCACTTCTTC+TGG 0.305872 2:+20078287 None:intergenic
ATAGAAAAGGTTACATTCTT+GGG 0.313160 2:-20074698 MsG0280007754.01.T01:CDS
TCAGGGTTTAAAGGGTCTTC+TGG 0.316372 2:+20078096 None:intergenic
GTTACTTCTAATGTTACTAA+TGG 0.318927 2:-20074749 MsG0280007754.01.T01:CDS
TTATCTTGCGGAAAATTAAC+AGG 0.322577 2:+20076704 None:intergenic
CGGTGATCGTCTTACTTATA+AGG 0.324376 2:-20077779 MsG0280007754.01.T01:intron
TGTCATTGCTTCACCTTGTA+AGG 0.328657 2:+20074943 None:intergenic
ACGTATGCAACCTATGTTAG+AGG 0.330544 2:-20076291 MsG0280007754.01.T01:CDS
GTTAAAGAGTATATCTTTGT+TGG 0.331859 2:+20078125 None:intergenic
ACTCTTTGGAATGAAGATAT+TGG 0.343085 2:-20077946 MsG0280007754.01.T01:CDS
GAAGACTAAAATAAGGTAGA+AGG 0.349390 2:-20074498 MsG0280007754.01.T01:exon
CAGGCAAGAGCTTTACCTTT+GGG 0.354744 2:-20075329 MsG0280007754.01.T01:CDS
TTCTTGGGGATACCTAATTA+TGG 0.360897 2:-20074683 MsG0280007754.01.T01:CDS
AGTGGAAATGGAAATAGTTA+TGG 0.365565 2:-20074875 MsG0280007754.01.T01:CDS
TTGAACTGAAGACTAAAATA+AGG 0.365980 2:-20074505 MsG0280007754.01.T01:CDS
CCCTTGTTTCACCTTAGTTA+AGG 0.368401 2:-20074408 MsG0280007754.01.T01:three_prime_UTR
ATCCCTTCAATATTGAACTT+TGG 0.371152 2:-20075769 MsG0280007754.01.T01:CDS
ATAAACTCACAGTTTCTATT+AGG 0.376587 2:-20075154 MsG0280007754.01.T01:CDS
CTATTAGGATTAAGAAAATC+AGG 0.379714 2:+20076192 None:intergenic
TAGTGGAAATAACTGGTAAA+AGG 0.379991 2:-20075891 MsG0280007754.01.T01:CDS
GATCAGTATACTCAGTTCAT+TGG 0.382985 2:-20077698 MsG0280007754.01.T01:intron
TACTAATGGAAAATTTGCTT+TGG 0.383338 2:-20074735 MsG0280007754.01.T01:CDS
GAAATGTTTCAGGGTTTAAA+GGG 0.385560 2:+20078088 None:intergenic
GAACACCTCATTCGAACTAT+TGG 0.389488 2:-20074906 MsG0280007754.01.T01:CDS
TATGATTCTCACAATTTGTA+TGG 0.393637 2:-20075946 MsG0280007754.01.T01:CDS
ACTCCACAACACAACTCATT+TGG 0.393968 2:-20078168 MsG0280007754.01.T01:CDS
ATCTTTGGAGTTCCTATGGT+TGG 0.396209 2:-20075745 MsG0280007754.01.T01:CDS
CCTTACAAAATTAACAGTTC+TGG 0.396993 2:-20076036 MsG0280007754.01.T01:CDS
TATTTCCACTAAGGCCTTGT+TGG 0.398751 2:+20075903 None:intergenic
AAGAAAAGTGGCCGCGCAAT+TGG 0.399941 2:+20075208 None:intergenic
GTGAAGATAAGGTCTGAGTT+TGG 0.402724 2:+20078191 None:intergenic
TTCATACATTCATCAACATC+TGG 0.406689 2:+20074243 None:intergenic
AAGAAAGCACATATTCTTTG+AGG 0.407259 2:+20074455 None:intergenic
ATTATCTCAAGTGCTTCTTT+CGG 0.408317 2:-20074291 MsG0280007754.01.T01:three_prime_UTR
AACAACCAACAAGGCCTTAG+TGG 0.410719 2:-20075908 MsG0280007754.01.T01:CDS
TCAACTATCTAGGTGAAGTT+TGG 0.419567 2:-20076233 MsG0280007754.01.T01:CDS
GGTGTATATATAAAGAGAAA+TGG 0.419581 2:-20076258 MsG0280007754.01.T01:CDS
TGGAATCTTTGGAGTTCCTA+TGG 0.422002 2:-20075749 MsG0280007754.01.T01:CDS
TCTTTCGGATTAAGTACAAA+TGG 0.424760 2:-20074276 MsG0280007754.01.T01:three_prime_UTR
TCAGGCAAGAGCTTTACCTT+TGG 0.428705 2:-20075330 MsG0280007754.01.T01:CDS
TCAGAAATATGTGCTTATCT+TGG 0.433264 2:-20076645 MsG0280007754.01.T01:CDS
ATTCCAAAGTTCAATATTGA+AGG 0.434787 2:+20075766 None:intergenic
TTTGGCACTCACTGAATTTG+AGG 0.436527 2:+20075039 None:intergenic
TGAGGTGTTCCGAGCTGCTT+TGG 0.436826 2:+20074919 None:intergenic
AGAAATGGAGTCAACTATCT+AGG 0.438589 2:-20076243 MsG0280007754.01.T01:CDS
AAGGCCTTAGTGGAAATAAC+TGG 0.445009 2:-20075898 MsG0280007754.01.T01:CDS
CCATAATGTAAAGATGTTGC+TGG 0.446043 2:+20075982 None:intergenic
GTCTCACCTGTGCTACAATC+TGG 0.446789 2:-20075118 MsG0280007754.01.T01:CDS
AATTCAGTGAGTGCCAAATC+AGG 0.446883 2:-20075034 MsG0280007754.01.T01:CDS
TTATCTAGTATAGTGTCAAA+AGG 0.447920 2:-20074359 MsG0280007754.01.T01:three_prime_UTR
TCTGAATGATCTCTTGCAAA+GGG 0.451001 2:+20075364 None:intergenic
ATGTACGAATCAAACACAAA+AGG 0.457037 2:-20075235 MsG0280007754.01.T01:CDS
GATGAAGATGATGAGACTCT+TGG 0.463129 2:+20078272 None:intergenic
TATCTGTCCACATAACTTCA+AGG 0.466342 2:+20076765 None:intergenic
GTTGATGCATACTTTCCTAA+AGG 0.469389 2:-20075085 MsG0280007754.01.T01:CDS
CTTTCGGATTAAGTACAAAT+GGG 0.470295 2:-20074275 MsG0280007754.01.T01:three_prime_UTR
GGTGAGGCTCTTGATCTAGA+AGG 0.473207 2:-20074833 MsG0280007754.01.T01:CDS
TTTACCAGTTATTTCCACTA+AGG 0.473476 2:+20075894 None:intergenic
TATCTAGGTGAAGTTTGGCC+TGG 0.473594 2:-20076228 MsG0280007754.01.T01:CDS
TGTACGAATCAAACACAAAA+GGG 0.487657 2:-20075234 MsG0280007754.01.T01:CDS
GGACAAGTTTATTTGGATGA+TGG 0.487865 2:-20074854 MsG0280007754.01.T01:CDS
TATGTTAGAGGTTTGCAAGC+TGG 0.488513 2:-20076279 MsG0280007754.01.T01:CDS
TAAAGACTAGAAATGTTTCA+GGG 0.489335 2:+20078079 None:intergenic
GACTTACCAAAAGACCAATA+AGG 0.490076 2:+20077659 None:intergenic
TTGGCACTCACTGAATTTGA+GGG 0.495031 2:+20075040 None:intergenic
TCAAGCCAAAGACCATCAAA+AGG 0.495965 2:+20076123 None:intergenic
TCGTATGTCGTGATATCCTC+GGG 0.500032 2:+20075178 None:intergenic
TACAAATGTCACTCCCCACT+TGG 0.500916 2:-20074218 MsG0280007754.01.T01:three_prime_UTR
CTGGCAAGTATACAGCTCAT+TGG 0.501264 2:-20075834 MsG0280007754.01.T01:CDS
ACTTCTTAATAGTAATGGAA+TGG 0.506681 2:-20077815 MsG0280007754.01.T01:CDS
CCTTAGTTAAGGTTACTACA+AGG 0.508079 2:-20074397 MsG0280007754.01.T01:three_prime_UTR
GTTGATCTACTCAAAATGAA+TGG 0.508385 2:+20075868 None:intergenic
TTCCAAAGTTCAATATTGAA+GGG 0.515791 2:+20075767 None:intergenic
TCAGGATAGTAAACTTGTCC+AGG 0.516398 2:+20076210 None:intergenic
GACCAATAAGGCATAGGAGC+AGG 0.516640 2:+20077671 None:intergenic
GTGAGAAAGGGTTCATCTGA+TGG 0.517583 2:-20077871 MsG0280007754.01.T01:CDS
CCTTGTAGTAACCTTAACTA+AGG 0.520734 2:+20074397 None:intergenic
TTCGTATGTCGTGATATCCT+CGG 0.526702 2:+20075177 None:intergenic
AAGGTAAAGCTCTTGCCTGA+TGG 0.527100 2:+20075333 None:intergenic
TATCTAGTATAGTGTCAAAA+GGG 0.534291 2:-20074358 MsG0280007754.01.T01:three_prime_UTR
CATATATCCGCTCCAACCAT+AGG 0.534754 2:+20075733 None:intergenic
CTGAAGAACTATGTCGGCGC+TGG 0.534767 2:-20075690 MsG0280007754.01.T01:CDS
GTGTGTAGAAATATGGAAGA+AGG 0.535911 2:+20075260 None:intergenic
ATCTGAATGATCTCTTGCAA+AGG 0.539186 2:+20075363 None:intergenic
ATCTGTCCACATAACTTCAA+GGG 0.541232 2:+20076766 None:intergenic
GCATACCCCTTGAAGTTATG+TGG 0.541516 2:-20076772 MsG0280007754.01.T01:CDS
TATGTGCTTATCTTGGATCC+AGG 0.542404 2:-20076638 MsG0280007754.01.T01:intron
TAGAAGGAGAGAAAGATCAA+TGG 0.544165 2:-20074817 MsG0280007754.01.T01:CDS
CAGGAGATAATGCTGCTACA+TGG 0.545216 2:-20075810 MsG0280007754.01.T01:CDS
AAGTATACAGCTCATTGGAC+AGG 0.547239 2:-20075829 MsG0280007754.01.T01:CDS
TGTTGTGGAGTGTGAAGATA+AGG 0.549530 2:+20078180 None:intergenic
GTAACCAACTATGCAAAAGC+TGG 0.550918 2:-20076794 MsG0280007754.01.T01:CDS
AGTTTATTTGGATGATGGTG+AGG 0.554211 2:-20074849 MsG0280007754.01.T01:CDS
AAACTTATCATCTTATCTTG+CGG 0.554720 2:+20076692 None:intergenic
TGGGGATACCTAATTATGGT+AGG 0.555154 2:-20074679 MsG0280007754.01.T01:CDS
GTCTTCTAAGTTTGTTACTG+TGG 0.557046 2:-20074564 MsG0280007754.01.T01:CDS
GTGGACAGATATTGATTACA+TGG 0.557543 2:-20076753 MsG0280007754.01.T01:CDS
AGTATACTCAGTTCATTGGT+AGG 0.561924 2:-20077694 MsG0280007754.01.T01:CDS
CTGATGGAAGAGTGAAAAGT+GGG 0.562079 2:-20077855 MsG0280007754.01.T01:CDS
ATAAAGATTCACATCAACAT+TGG 0.567891 2:+20077918 None:intergenic
CCAAAAGACCAATAAGGCAT+AGG 0.573302 2:+20077665 None:intergenic
AACAACCAATAGTTCGAATG+AGG 0.573769 2:+20074901 None:intergenic
GTGAAAAGTGGGGCCACACA+TGG 0.573803 2:-20077844 MsG0280007754.01.T01:CDS
AAGACTAAAATAAGGTAGAA+GGG 0.574007 2:-20074497 MsG0280007754.01.T01:exon
TGGAAGAAGGCGGTAACGAA+GGG 0.574037 2:+20075273 None:intergenic
ACTGCACCAGATTGTAGCAC+AGG 0.578361 2:+20075112 None:intergenic
TCACAGTTTCTATTAGGCAA+AGG 0.581170 2:-20075148 MsG0280007754.01.T01:CDS
CAAGCCAAAGACCATCAAAA+GGG 0.585119 2:+20076124 None:intergenic
ATAAATGTGCATGTTGGCGA+AGG 0.585403 2:-20074977 MsG0280007754.01.T01:CDS
AGCTTGCAAACCTCTAACAT+AGG 0.591202 2:+20076281 None:intergenic
GGGTTGTCATGGTTTGAATG+TGG 0.592344 2:+20076060 None:intergenic
ATGGAAGAAGGCGGTAACGA+AGG 0.592743 2:+20075272 None:intergenic
TAGAAAAGGTTACATTCTTG+GGG 0.594307 2:-20074697 MsG0280007754.01.T01:CDS
ACCTTAACTAAGGTGAAACA+AGG 0.603803 2:+20074407 None:intergenic
ACACTACTGAAGAACTATGT+CGG 0.607415 2:-20075696 MsG0280007754.01.T01:CDS
TGGAGTTCCTATGGTTGGAG+CGG 0.611312 2:-20075740 MsG0280007754.01.T01:CDS
TCGGGGAATGAAAAGAAAAG+TGG 0.613496 2:+20075196 None:intergenic
AAGAAGTAAAACACCATGTG+TGG 0.615128 2:+20077831 None:intergenic
TCTGATGGAAGAGTGAAAAG+TGG 0.615826 2:-20077856 MsG0280007754.01.T01:CDS
CTTAGTTAAGGTTACTACAA+GGG 0.619003 2:-20074396 MsG0280007754.01.T01:three_prime_UTR
CAATGACAACCAAAGCAGCT+CGG 0.624482 2:-20074928 MsG0280007754.01.T01:CDS
AAACCAAATGAGTTGTGTTG+TGG 0.625235 2:+20078165 None:intergenic
TGCACATTTATGTGATCAGA+TGG 0.629493 2:+20074989 None:intergenic
TGTAAGTGATGTCGAAGGTG+TGG 0.640371 2:-20076816 MsG0280007754.01.T01:CDS
TCTGTCCACATAACTTCAAG+GGG 0.647898 2:+20076767 None:intergenic
ATGGTTGGAGCGGATATATG+CGG 0.650160 2:-20075730 MsG0280007754.01.T01:CDS
TGTAGAAATATGGAAGAAGG+CGG 0.651249 2:+20075263 None:intergenic
AAGAATGTAAGTGATGTCGA+AGG 0.660102 2:-20076821 MsG0280007754.01.T01:CDS
ATGCTGCAACTGAATCCCAA+AGG 0.664437 2:+20075314 None:intergenic
AGTGAGTTAAATGTTGTGAG+TGG 0.666595 2:-20074632 MsG0280007754.01.T01:CDS
GATCACATAAATGTGCATGT+TGG 0.667069 2:-20074983 MsG0280007754.01.T01:CDS
CTGAATGATCTCTTGCAAAG+GGG 0.678141 2:+20075365 None:intergenic
CAAAAGGGACACCAATTGCG+CGG 0.682204 2:-20075219 MsG0280007754.01.T01:CDS
CCTTAACTAAGGTGAAACAA+GGG 0.685925 2:+20074408 None:intergenic
AGAATCCAAAACAACCAACA+AGG 0.695173 2:-20075917 MsG0280007754.01.T01:CDS
GGAATGGATGTTGAATATAG+CGG 0.714622 2:-20077799 MsG0280007754.01.T01:CDS
TGAGTGGAATGAATTCAATG+AGG 0.735898 2:-20074616 MsG0280007754.01.T01:CDS
TGATGGAAGAGTGAAAAGTG+GGG 0.741184 2:-20077854 MsG0280007754.01.T01:CDS
CGTATGTCGTGATATCCTCG+GGG 0.754542 2:+20075179 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATAAAAGCTACATA+TGG - Chr2:20076910-20076929 MsG0280007754.01.T01:intron 15.0%
!! CACAAAATTAATCCATATAA+AGG - Chr2:20075486-20075505 MsG0280007754.01.T01:intron 20.0%
!! GTCTTTATATTTAGAAATTG+TGG + Chr2:20075366-20075385 None:intergenic 20.0%
!! TGGAATTTGATATAATGAAT+CGG + Chr2:20075612-20075631 None:intergenic 20.0%
!! TTCATTATATCAAATTCCAA+TGG - Chr2:20075613-20075632 MsG0280007754.01.T01:intron 20.0%
!! TTTCATAAAGTACAATTCAA+TGG + Chr2:20075519-20075538 None:intergenic 20.0%
!! TTTGTGTATCATCTATATAT+AGG + Chr2:20075472-20075491 None:intergenic 20.0%
!!! GTTTTACTTCTTAATAGTAA+TGG - Chr2:20074695-20074714 MsG0280007754.01.T01:CDS 20.0%
!!! TATTTTATGGTGTTAGAATT+AGG + Chr2:20075905-20075924 None:intergenic 20.0%
!!! TCAAATTTAAAACAGCTTAT+AGG - Chr2:20077979-20077998 MsG0280007754.01.T01:CDS 20.0%
!!! TTAGTTTGGAAGATATTTTA+TGG + Chr2:20075918-20075937 None:intergenic 20.0%
!!! TTTTGATCACAAAATTTGAT+AGG - Chr2:20077929-20077948 MsG0280007754.01.T01:CDS 20.0%
!!! TTTTGATTTGTATTTTTTGC+TGG - Chr2:20074772-20074791 MsG0280007754.01.T01:CDS 20.0%
!!! TTTTTTCTATGACAATAACA+TGG - Chr2:20075276-20075295 MsG0280007754.01.T01:CDS 20.0%
! AAAAATTCAACAAACCATGT+TGG + Chr2:20074881-20074900 None:intergenic 25.0%
! AAACTTATCATCTTATCTTG+CGG + Chr2:20075826-20075845 None:intergenic 25.0%
! AAGACTAAAATAAGGTAGAA+GGG - Chr2:20078018-20078037 MsG0280007754.01.T01:CDS 25.0%
! AATGTTGATGTGAATCTTTA+TGG - Chr2:20074599-20074618 MsG0280007754.01.T01:CDS 25.0%
! ACTTGAAAGAATGTGTTTAT+AGG - Chr2:20075397-20075416 MsG0280007754.01.T01:intron 25.0%
! ATAAACTCACAGTTTCTATT+AGG - Chr2:20077361-20077380 MsG0280007754.01.T01:intron 25.0%
! ATAAAGATTCACATCAACAT+TGG + Chr2:20074600-20074619 None:intergenic 25.0%
! ATAGAAAAGGTTACATTCTT+GGG - Chr2:20077817-20077836 MsG0280007754.01.T01:CDS 25.0%
! ATATTGTAAACTCTTTGTGA+AGG - Chr2:20075646-20075665 MsG0280007754.01.T01:intron 25.0%
! ATTCAGATAAAAATTCCATC+AGG - Chr2:20077167-20077186 MsG0280007754.01.T01:intron 25.0%
! ATTCCAAAGTTCAATATTGA+AGG + Chr2:20076752-20076771 None:intergenic 25.0%
! CAAAGAGTTTACAATATTTG+TGG + Chr2:20075643-20075662 None:intergenic 25.0%
! CTATTAGGATTAAGAAAATC+AGG + Chr2:20076326-20076345 None:intergenic 25.0%
! GGTGTATATATAAAGAGAAA+TGG - Chr2:20076257-20076276 MsG0280007754.01.T01:CDS 25.0%
! GTTACTTCTAATGTTACTAA+TGG - Chr2:20077766-20077785 MsG0280007754.01.T01:intron 25.0%
! TAAAGACTAGAAATGTTTCA+GGG + Chr2:20074439-20074458 None:intergenic 25.0%
! TACATTAGTGTGTAGAAATA+TGG + Chr2:20077265-20077284 None:intergenic 25.0%
! TAGTTATGGACAAGTTTATT+TGG - Chr2:20077654-20077673 MsG0280007754.01.T01:intron 25.0%
! TATCTAGTATAGTGTCAAAA+GGG - Chr2:20078157-20078176 MsG0280007754.01.T01:CDS 25.0%
! TATGATTCTCACAATTTGTA+TGG - Chr2:20076569-20076588 MsG0280007754.01.T01:intron 25.0%
! TGAGTATAGTATGTTTAGTT+TGG + Chr2:20075932-20075951 None:intergenic 25.0%
! TTAAAGACTAGAAATGTTTC+AGG + Chr2:20074440-20074459 None:intergenic 25.0%
! TTATCTAGTATAGTGTCAAA+AGG - Chr2:20078156-20078175 MsG0280007754.01.T01:CDS 25.0%
! TTCCAAAGTTCAATATTGAA+GGG + Chr2:20076751-20076770 None:intergenic 25.0%
! TTGAACTGAAGACTAAAATA+AGG - Chr2:20078010-20078029 MsG0280007754.01.T01:CDS 25.0%
! TTTCTCACATCCAAATAAAA+TGG + Chr2:20074632-20074651 None:intergenic 25.0%
!! AACTGTTAATTTTGTAAGGA+GGG + Chr2:20076478-20076497 None:intergenic 25.0%
!! ACTTCTTAATAGTAATGGAA+TGG - Chr2:20074700-20074719 MsG0280007754.01.T01:CDS 25.0%
!! ATCCTAATAGTCAAGAATTT+TGG - Chr2:20076336-20076355 MsG0280007754.01.T01:intron 25.0%
!! GTTAAAGAGTATATCTTTGT+TGG + Chr2:20074393-20074412 None:intergenic 25.0%
!! TACTAATGGAAAATTTGCTT+TGG - Chr2:20077780-20077799 MsG0280007754.01.T01:CDS 25.0%
!! TATTTTCCTGAATGTAGTTA+GGG - Chr2:20077119-20077138 MsG0280007754.01.T01:intron 25.0%
!! TCCTAATAGTCAAGAATTTT+GGG - Chr2:20076337-20076356 MsG0280007754.01.T01:intron 25.0%
!! TTATTTTCCTGAATGTAGTT+AGG - Chr2:20077118-20077137 MsG0280007754.01.T01:intron 25.0%
!! TTTTTCATTCCTTTTTATCC+TGG - Chr2:20074896-20074915 MsG0280007754.01.T01:CDS 25.0%
!!! ATATTGAACTTTGGAATCTT+TGG - Chr2:20076755-20076774 MsG0280007754.01.T01:CDS 25.0%
!!! ATTTTATTTGGATGTGAGAA+AGG - Chr2:20074631-20074650 MsG0280007754.01.T01:CDS 25.0%
!!! ATTTTGAGTTTTGCGAATTT+TGG + Chr2:20074290-20074309 None:intergenic 25.0%
!!! TGAAACATTTCTAGTCTTTA+AGG - Chr2:20074439-20074458 MsG0280007754.01.T01:three_prime_UTR 25.0%
!!! TTTTATTTGGATGTGAGAAA+GGG - Chr2:20074632-20074651 MsG0280007754.01.T01:CDS 25.0%
AAATTTCTATGCATTAGTCC+AGG - Chr2:20075536-20075555 MsG0280007754.01.T01:intron 30.0%
AATGGCTATAGACCTTTATA+TGG + Chr2:20075501-20075520 None:intergenic 30.0%
AGAAATGTTTCAGGGTTTAA+AGG + Chr2:20074431-20074450 None:intergenic 30.0%
AGATCAAACCAATTTCCTTT+AGG + Chr2:20077448-20077467 None:intergenic 30.0%
AGTGGAAATGGAAATAGTTA+TGG - Chr2:20077640-20077659 MsG0280007754.01.T01:intron 30.0%
ATCCCTTCAATATTGAACTT+TGG - Chr2:20076746-20076765 MsG0280007754.01.T01:CDS 30.0%
ATGTACGAATCAAACACAAA+AGG - Chr2:20077280-20077299 MsG0280007754.01.T01:intron 30.0%
ATTATCTCAAGTGCTTCTTT+CGG - Chr2:20078224-20078243 MsG0280007754.01.T01:CDS 30.0%
ATTGCACTAATTGTGAAACT+AGG + Chr2:20076022-20076041 None:intergenic 30.0%
CAAACATTGATCCTCAAAAT+CGG - Chr2:20076859-20076878 MsG0280007754.01.T01:intron 30.0%
CATACTTTCCTAAAGGAAAT+TGG - Chr2:20077437-20077456 MsG0280007754.01.T01:intron 30.0%
CATAGAAAAGGTTACATTCT+TGG - Chr2:20077816-20077835 MsG0280007754.01.T01:CDS 30.0%
CCAAAAATGGATCATAGAAA+AGG - Chr2:20077804-20077823 MsG0280007754.01.T01:CDS 30.0%
CCATCAGAGTCTTAAAAAAA+GGG + Chr2:20077060-20077079 None:intergenic 30.0%
CCATTTAACCTACCATAATT+AGG + Chr2:20077847-20077866 None:intergenic 30.0%
CCTAATTATGGTAGGTTAAA+TGG - Chr2:20077844-20077863 MsG0280007754.01.T01:CDS 30.0%
CCTTACAAAATTAACAGTTC+TGG - Chr2:20076479-20076498 MsG0280007754.01.T01:intron 30.0%
CTAAAACTACCAGGATAAAA+AGG + Chr2:20074908-20074927 None:intergenic 30.0%
CTATCTTCTATTTCGCATAA+CGG - Chr2:20076068-20076087 MsG0280007754.01.T01:CDS 30.0%
CTTAGTTAAGGTTACTACAA+GGG - Chr2:20078119-20078138 MsG0280007754.01.T01:CDS 30.0%
CTTTCGGATTAAGTACAAAT+GGG - Chr2:20078240-20078259 MsG0280007754.01.T01:CDS 30.0%
GAAATAGAAGATAGTATTGC+AGG + Chr2:20076062-20076081 None:intergenic 30.0%
GAAATGTTTCAGGGTTTAAA+GGG + Chr2:20074430-20074449 None:intergenic 30.0%
GAAGACTAAAATAAGGTAGA+AGG - Chr2:20078017-20078036 MsG0280007754.01.T01:CDS 30.0%
GTAAAACAACTAAAACTACC+AGG + Chr2:20074917-20074936 None:intergenic 30.0%
GTTCCAAATTGATACCAATA+AGG + Chr2:20075074-20075093 None:intergenic 30.0%
GTTGATCTACTCAAAATGAA+TGG + Chr2:20076650-20076669 None:intergenic 30.0%
TAGAAAAGGTTACATTCTTG+GGG - Chr2:20077818-20077837 MsG0280007754.01.T01:CDS 30.0%
TAGTGGAAATAACTGGTAAA+AGG - Chr2:20076624-20076643 MsG0280007754.01.T01:intron 30.0%
TCAGAAATATGTGCTTATCT+TGG - Chr2:20075870-20075889 MsG0280007754.01.T01:CDS 30.0%
TCCATCAGAGTCTTAAAAAA+AGG + Chr2:20077061-20077080 None:intergenic 30.0%
TCTATGACAATAACATGGTT+TGG - Chr2:20075281-20075300 MsG0280007754.01.T01:CDS 30.0%
TCTTTCGGATTAAGTACAAA+TGG - Chr2:20078239-20078258 MsG0280007754.01.T01:CDS 30.0%
TGACCTTATTGGTATCAATT+TGG - Chr2:20075068-20075087 MsG0280007754.01.T01:CDS 30.0%
TGTACGAATCAAACACAAAA+GGG - Chr2:20077281-20077300 MsG0280007754.01.T01:intron 30.0%
TTATCTTGCGGAAAATTAAC+AGG + Chr2:20075814-20075833 None:intergenic 30.0%
TTCATACATTCATCAACATC+TGG + Chr2:20078275-20078294 None:intergenic 30.0%
TTTGACATATTTGCCTGATT+TGG + Chr2:20077497-20077516 None:intergenic 30.0%
! AAGAAAGCACATATTCTTTG+AGG + Chr2:20078063-20078082 None:intergenic 30.0%
! AATAACATGGTTTGGAATTG+AGG - Chr2:20075289-20075308 MsG0280007754.01.T01:CDS 30.0%
! AATTTGCTTTGGACCAAAAA+TGG - Chr2:20077791-20077810 MsG0280007754.01.T01:CDS 30.0%
! ATTTTCCTGAATGTAGTTAG+GGG - Chr2:20077120-20077139 MsG0280007754.01.T01:intron 30.0%
! CAATATTTGTGGATTACCAT+TGG + Chr2:20075632-20075651 None:intergenic 30.0%
! CCAGAACTGTTAATTTTGTA+AGG + Chr2:20076482-20076501 None:intergenic 30.0%
! CCTTTTCTATGATCCATTTT+TGG + Chr2:20077807-20077826 None:intergenic 30.0%
! GAACTGTTAATTTTGTAAGG+AGG + Chr2:20076479-20076498 None:intergenic 30.0%
! TTTACCAGTTATTTCCACTA+AGG + Chr2:20076624-20076643 None:intergenic 30.0%
!! ACTCTTTGGAATGAAGATAT+TGG - Chr2:20074569-20074588 MsG0280007754.01.T01:CDS 30.0%
!! ATTTCTGACCATTTTTGTGA+AGG + Chr2:20075858-20075877 None:intergenic 30.0%
!! TGTGATATGTCATTGATTTG+AGG - Chr2:20076168-20076187 MsG0280007754.01.T01:CDS 30.0%
!! TTTCTGACCATTTTTGTGAA+GGG + Chr2:20075857-20075876 None:intergenic 30.0%
!!! AGATCTGTGATTTTTTGCTA+CGG - Chr2:20076935-20076954 MsG0280007754.01.T01:intron 30.0%
!!! GAACTATTGGTTGTTTTAAG+TGG - Chr2:20077622-20077641 MsG0280007754.01.T01:intron 30.0%
!!! TATTTCGCATAACGGATTTT+TGG - Chr2:20076076-20076095 MsG0280007754.01.T01:CDS 30.0%
!!! TTGGTTGTTTTAAGTGGAAA+TGG - Chr2:20077628-20077647 MsG0280007754.01.T01:intron 30.0%
AAACCAAATGAGTTGTGTTG+TGG + Chr2:20074353-20074372 None:intergenic 35.0%
AACAACCAATAGTTCGAATG+AGG + Chr2:20077617-20077636 None:intergenic 35.0%
AAGAAGTAAAACACCATGTG+TGG + Chr2:20074687-20074706 None:intergenic 35.0%
AAGAATGTAAGTGATGTCGA+AGG - Chr2:20075694-20075713 MsG0280007754.01.T01:CDS 35.0%
ACACTACTGAAGAACTATGT+CGG - Chr2:20076819-20076838 MsG0280007754.01.T01:CDS 35.0%
ACCTTAACTAAGGTGAAACA+AGG + Chr2:20078111-20078130 None:intergenic 35.0%
ACTTCAGCAATGACTGATAT+TGG - Chr2:20074995-20075014 MsG0280007754.01.T01:CDS 35.0%
AGAAATGGAGTCAACTATCT+AGG - Chr2:20076272-20076291 MsG0280007754.01.T01:CDS 35.0%
AGAATCCAAAACAACCAACA+AGG - Chr2:20076598-20076617 MsG0280007754.01.T01:intron 35.0%
AGGCCATTCCTAACTAATTA+GGG + Chr2:20075452-20075471 None:intergenic 35.0%
AGTATACTCAGTTCATTGGT+AGG - Chr2:20074821-20074840 MsG0280007754.01.T01:CDS 35.0%
AGTGAGTTAAATGTTGTGAG+TGG - Chr2:20077883-20077902 MsG0280007754.01.T01:CDS 35.0%
ATCTGAATGATCTCTTGCAA+AGG + Chr2:20077155-20077174 None:intergenic 35.0%
ATCTGTCCACATAACTTCAA+GGG + Chr2:20075752-20075771 None:intergenic 35.0%
CAAACCAAACTTTCACTCTT+TGG - Chr2:20074555-20074574 MsG0280007754.01.T01:CDS 35.0%
CATTCCAAAGAGTGAAAGTT+TGG + Chr2:20074562-20074581 None:intergenic 35.0%
CCAGCAACATCTTTACATTA+TGG - Chr2:20076533-20076552 MsG0280007754.01.T01:intron 35.0%
CCATAATGTAAAGATGTTGC+TGG + Chr2:20076536-20076555 None:intergenic 35.0%
CCTTAACTAAGGTGAAACAA+GGG + Chr2:20078110-20078129 None:intergenic 35.0%
CCTTAGTTAAGGTTACTACA+AGG - Chr2:20078118-20078137 MsG0280007754.01.T01:CDS 35.0%
CCTTGTAGTAACCTTAACTA+AGG + Chr2:20078121-20078140 None:intergenic 35.0%
CGTCTTACTTATAAGGTGAT+TGG - Chr2:20074743-20074762 MsG0280007754.01.T01:CDS 35.0%
CTGTCAAATTGACACTGATA+AGG - Chr2:20075141-20075160 MsG0280007754.01.T01:CDS 35.0%
CTTACTTATAAGGTGATTGG+TGG - Chr2:20074746-20074765 MsG0280007754.01.T01:CDS 35.0%
GAAAGACAATTGCAATAGAC+TGG + Chr2:20075577-20075596 None:intergenic 35.0%
GACTTACCAAAAGACCAATA+AGG + Chr2:20074859-20074878 None:intergenic 35.0%
GATCACATAAATGTGCATGT+TGG - Chr2:20077532-20077551 MsG0280007754.01.T01:intron 35.0%
GATCAGTATACTCAGTTCAT+TGG - Chr2:20074817-20074836 MsG0280007754.01.T01:CDS 35.0%
GCCCAAAATTCTTGACTATT+AGG + Chr2:20076341-20076360 None:intergenic 35.0%
GCGTTATCAATGACGTATTA+CGG + Chr2:20076116-20076135 None:intergenic 35.0%
GGAATGGATGTTGAATATAG+CGG - Chr2:20074716-20074735 MsG0280007754.01.T01:CDS 35.0%
GGACAAGTTTATTTGGATGA+TGG - Chr2:20077661-20077680 MsG0280007754.01.T01:intron 35.0%
GTGTGTAGAAATATGGAAGA+AGG + Chr2:20077258-20077277 None:intergenic 35.0%
GTTGATACCCTTCACAAAAA+TGG - Chr2:20075847-20075866 MsG0280007754.01.T01:CDS 35.0%
GTTGATGCATACTTTCCTAA+AGG - Chr2:20077430-20077449 MsG0280007754.01.T01:intron 35.0%
TACTGATCCAAAACCAATTC+AGG + Chr2:20074805-20074824 None:intergenic 35.0%
TAGAAGGAGAGAAAGATCAA+TGG - Chr2:20077698-20077717 MsG0280007754.01.T01:intron 35.0%
TAGGCCATTCCTAACTAATT+AGG + Chr2:20075453-20075472 None:intergenic 35.0%
TATCTGTCCACATAACTTCA+AGG + Chr2:20075753-20075772 None:intergenic 35.0%
TCAAAAAGAGCTTCTCTGTA+TGG - Chr2:20074494-20074513 MsG0280007754.01.T01:exon 35.0%
TCAACTATCTAGGTGAAGTT+TGG - Chr2:20076282-20076301 MsG0280007754.01.T01:CDS 35.0%
TCACAGTTTCTATTAGGCAA+AGG - Chr2:20077367-20077386 MsG0280007754.01.T01:intron 35.0%
TCTGAATGATCTCTTGCAAA+GGG + Chr2:20077154-20077173 None:intergenic 35.0%
TGAGTGGAATGAATTCAATG+AGG - Chr2:20077899-20077918 MsG0280007754.01.T01:CDS 35.0%
TGCACATTTATGTGATCAGA+TGG + Chr2:20077529-20077548 None:intergenic 35.0%
TGTAGAAATATGGAAGAAGG+CGG + Chr2:20077255-20077274 None:intergenic 35.0%
TGTGAAACTAGGATAGTGTT+GGG + Chr2:20076011-20076030 None:intergenic 35.0%
TTAGTCCAGTGAAAAAGTTG+TGG + Chr2:20076892-20076911 None:intergenic 35.0%
TTCTTGGGGATACCTAATTA+TGG - Chr2:20077832-20077851 MsG0280007754.01.T01:CDS 35.0%
TTGAACAAATTCTCAGGTTC+TGG - Chr2:20075215-20075234 MsG0280007754.01.T01:CDS 35.0%
TTGTGAAACTAGGATAGTGT+TGG + Chr2:20076012-20076031 None:intergenic 35.0%
! AATGACATTCTCCCTTTTGA+TGG - Chr2:20076380-20076399 MsG0280007754.01.T01:intron 35.0%
! AGATCAACTTTTGTTAGCTC+TGG - Chr2:20076662-20076681 MsG0280007754.01.T01:CDS 35.0%
! AGTTTATTTGGATGATGGTG+AGG - Chr2:20077666-20077685 MsG0280007754.01.T01:CDS 35.0%
! GAAATTGTGGTTTGCAACAA+CGG + Chr2:20075353-20075372 None:intergenic 35.0%
! GGAACAGTTTTCTCGTTAAT+TGG + Chr2:20076515-20076534 None:intergenic 35.0%
! GGTTTTCATCAATGTCGATA+TGG - Chr2:20075667-20075686 MsG0280007754.01.T01:intron 35.0%
! GTGGACAGATATTGATTACA+TGG - Chr2:20075762-20075781 MsG0280007754.01.T01:CDS 35.0%
! TACAGAGAAGCTCTTTTTGA+AGG + Chr2:20074494-20074513 None:intergenic 35.0%
! TGGACACTTGTGAGATTTTA+TGG - Chr2:20077718-20077737 MsG0280007754.01.T01:intron 35.0%
! TGGCTCTCATCCATTTTATT+TGG - Chr2:20074619-20074638 MsG0280007754.01.T01:CDS 35.0%
! TTGAGGCAAATTTTGTACAC+AGG - Chr2:20076185-20076204 MsG0280007754.01.T01:CDS 35.0%
! TTGAGTTTTGCGAATTTTGG+TGG + Chr2:20074287-20074306 None:intergenic 35.0%
! TTTTTGCTACGGGTAAAGAA+AGG - Chr2:20076946-20076965 MsG0280007754.01.T01:intron 35.0%
!! AATGACTGATATTGGTTCTC+GGG - Chr2:20075003-20075022 MsG0280007754.01.T01:CDS 35.0%
!! CAATGACTGATATTGGTTCT+CGG - Chr2:20075002-20075021 MsG0280007754.01.T01:CDS 35.0%
!! GTCTTCTAAGTTTGTTACTG+TGG - Chr2:20077951-20077970 MsG0280007754.01.T01:CDS 35.0%
!! TTCATCTCCTGAATTGGTTT+TGG - Chr2:20074795-20074814 MsG0280007754.01.T01:CDS 35.0%
!!! CCCTTTTTTTAAGACTCTGA+TGG - Chr2:20077057-20077076 MsG0280007754.01.T01:intron 35.0%
!!! GATCTGTGATTTTTTGCTAC+GGG - Chr2:20076936-20076955 MsG0280007754.01.T01:intron 35.0%
!!! TTTTAGAATCCCTTACGTTG+TGG - Chr2:20075321-20075340 MsG0280007754.01.T01:CDS 35.0%
AAGGCCTTAGTGGAAATAAC+TGG - Chr2:20076617-20076636 MsG0280007754.01.T01:intron 40.0%
AAGTATACAGCTCATTGGAC+AGG - Chr2:20076686-20076705 MsG0280007754.01.T01:CDS 40.0%
AATTCAGTGAGTGCCAAATC+AGG - Chr2:20077481-20077500 MsG0280007754.01.T01:intron 40.0%
ACGTATGCAACCTATGTTAG+AGG - Chr2:20076224-20076243 MsG0280007754.01.T01:CDS 40.0%
ACTCCACAACACAACTCATT+TGG - Chr2:20074347-20074366 MsG0280007754.01.T01:three_prime_UTR 40.0%
ACTCTTGGAATCACTTCTTC+TGG + Chr2:20074231-20074250 None:intergenic 40.0%
AGCCCCTAATTAGTTAGGAA+TGG - Chr2:20075446-20075465 MsG0280007754.01.T01:intron 40.0%
AGCTTGCAAACCTCTAACAT+AGG + Chr2:20076237-20076256 None:intergenic 40.0%
ATAAATGTGCATGTTGGCGA+AGG - Chr2:20077538-20077557 MsG0280007754.01.T01:intron 40.0%
ATCTCTTGCAAAGGGGTAAA+AGG + Chr2:20077146-20077165 None:intergenic 40.0%
CAAGCCAAAGACCATCAAAA+GGG + Chr2:20076394-20076413 None:intergenic 40.0%
CAAGTGTTTATAGTCAGTCG+TGG - Chr2:20074948-20074967 MsG0280007754.01.T01:CDS 40.0%
CAATTAGTGCAATCCTAGTC+CGG - Chr2:20076029-20076048 MsG0280007754.01.T01:CDS 40.0%
CCAAAAGACCAATAAGGCAT+AGG + Chr2:20074853-20074872 None:intergenic 40.0%
CGGTGATCGTCTTACTTATA+AGG - Chr2:20074736-20074755 MsG0280007754.01.T01:CDS 40.0%
CTATCTCAGACGTTACAACA+AGG + Chr2:20075048-20075067 None:intergenic 40.0%
CTGAATGATCTCTTGCAAAG+GGG + Chr2:20077153-20077172 None:intergenic 40.0%
CTGATGGAAGAGTGAAAAGT+GGG - Chr2:20074660-20074679 MsG0280007754.01.T01:CDS 40.0%
GAACACCTCATTCGAACTAT+TGG - Chr2:20077609-20077628 MsG0280007754.01.T01:intron 40.0%
GATGAAGATGATGAGACTCT+TGG + Chr2:20074246-20074265 None:intergenic 40.0%
GGCCATTCCTAACTAATTAG+GGG + Chr2:20075451-20075470 None:intergenic 40.0%
GTAACCAACTATGCAAAAGC+TGG - Chr2:20075721-20075740 MsG0280007754.01.T01:CDS 40.0%
GTGAAGATAAGGTCTGAGTT+TGG + Chr2:20074327-20074346 None:intergenic 40.0%
GTTTATAGTCAGTCGTGGAT+CGG - Chr2:20074953-20074972 MsG0280007754.01.T01:CDS 40.0%
TATGTGCTTATCTTGGATCC+AGG - Chr2:20075877-20075896 MsG0280007754.01.T01:CDS 40.0%
TATGTTAGAGGTTTGCAAGC+TGG - Chr2:20076236-20076255 MsG0280007754.01.T01:CDS 40.0%
TCAAGCCAAAGACCATCAAA+AGG + Chr2:20076395-20076414 None:intergenic 40.0%
TCAGGATAGTAAACTTGTCC+AGG + Chr2:20076308-20076327 None:intergenic 40.0%
TCGGGGAATGAAAAGAAAAG+TGG + Chr2:20077322-20077341 None:intergenic 40.0%
TCTGATGGAAGAGTGAAAAG+TGG - Chr2:20074659-20074678 MsG0280007754.01.T01:CDS 40.0%
TCTGTCCACATAACTTCAAG+GGG + Chr2:20075751-20075770 None:intergenic 40.0%
TGATGGAAGAGTGAAAAGTG+GGG - Chr2:20074661-20074680 MsG0280007754.01.T01:CDS 40.0%
TGGGGATACCTAATTATGGT+AGG - Chr2:20077836-20077855 MsG0280007754.01.T01:CDS 40.0%
TGTCATTGCTTCACCTTGTA+AGG + Chr2:20077575-20077594 None:intergenic 40.0%
TGTTGAAAACTCAAGTGTGG+AGG - Chr2:20075420-20075439 MsG0280007754.01.T01:intron 40.0%
TGTTGTGGAGTGTGAAGATA+AGG + Chr2:20074338-20074357 None:intergenic 40.0%
TGTTTATGCGACTGCAATTG+CGG + Chr2:20077028-20077047 None:intergenic 40.0%
TTCGTATGTCGTGATATCCT+CGG + Chr2:20077341-20077360 None:intergenic 40.0%
TTGGCACTCACTGAATTTGA+GGG + Chr2:20077478-20077497 None:intergenic 40.0%
TTTGGCACTCACTGAATTTG+AGG + Chr2:20077479-20077498 None:intergenic 40.0%
! AAAGCACCAATGACATCTGA+CGG + Chr2:20075197-20075216 None:intergenic 40.0%
! ACTTTTCTTTTCATTCCCCG+AGG - Chr2:20077321-20077340 MsG0280007754.01.T01:intron 40.0%
! AGAGCTTCTCTGTATGGTTT+TGG - Chr2:20074500-20074519 MsG0280007754.01.T01:exon 40.0%
! CCCTTGTTTCACCTTAGTTA+AGG - Chr2:20078107-20078126 MsG0280007754.01.T01:CDS 40.0%
! GGTGCTTTGAACAAATTCTC+AGG - Chr2:20075209-20075228 MsG0280007754.01.T01:CDS 40.0%
! GTCTGAGATAGTGACCTTAT+TGG - Chr2:20075057-20075076 MsG0280007754.01.T01:CDS 40.0%
! GTCTTTTGGTAAGTCCAACA+TGG - Chr2:20074864-20074883 MsG0280007754.01.T01:CDS 40.0%
! TATGCCAGCTTTTGCATAGT+TGG + Chr2:20075728-20075747 None:intergenic 40.0%
! TATTTCCACTAAGGCCTTGT+TGG + Chr2:20076615-20076634 None:intergenic 40.0%
! TGGTGTTAGAATTAGGTACC+TGG + Chr2:20075898-20075917 None:intergenic 40.0%
! TGGTGTTAGATTTGAATGCC+TGG + Chr2:20075557-20075576 None:intergenic 40.0%
! TGTTGGCGAAGGTAACATTT+TGG - Chr2:20077549-20077568 MsG0280007754.01.T01:intron 40.0%
! TTTTGTAAGGAGGGTTGTCA+TGG + Chr2:20076469-20076488 None:intergenic 40.0%
!! AGGTGTTGAAAACTCAAGTG+TGG - Chr2:20075417-20075436 MsG0280007754.01.T01:intron 40.0%
!! ATCTTTGGAGTTCCTATGGT+TGG - Chr2:20076770-20076789 MsG0280007754.01.T01:CDS 40.0%
!! TGGAATCTTTGGAGTTCCTA+TGG - Chr2:20076766-20076785 MsG0280007754.01.T01:CDS 40.0%
!! TTCTCCCTTTTGATGGTCTT+TGG - Chr2:20076387-20076406 MsG0280007754.01.T01:intron 40.0%
!!! AGCATCCACAACTTTTTCAC+TGG - Chr2:20076884-20076903 MsG0280007754.01.T01:intron 40.0%
!!! CCTATGCCTTATTGGTCTTT+TGG - Chr2:20074850-20074869 MsG0280007754.01.T01:CDS 40.0%
!!! GGTAACATTTTGGCCTTACA+AGG - Chr2:20077559-20077578 MsG0280007754.01.T01:intron 40.0%
!!! TAAGGCCTTGTTGGTTGTTT+TGG + Chr2:20076606-20076625 None:intergenic 40.0%
AAAGGCCCCTAACTACATTC+AGG + Chr2:20077128-20077147 None:intergenic 45.0%
AACAACCAACAAGGCCTTAG+TGG - Chr2:20076607-20076626 MsG0280007754.01.T01:intron 45.0%
AAGCACCAATGACATCTGAC+GGG + Chr2:20075196-20075215 None:intergenic 45.0%
AAGGTAAAGCTCTTGCCTGA+TGG + Chr2:20077185-20077204 None:intergenic 45.0%
ATGCTGCAACTGAATCCCAA+AGG + Chr2:20077204-20077223 None:intergenic 45.0%
ATGGTTGGAGCGGATATATG+CGG - Chr2:20076785-20076804 MsG0280007754.01.T01:CDS 45.0%
CAATGACAACCAAAGCAGCT+CGG - Chr2:20077587-20077606 MsG0280007754.01.T01:intron 45.0%
CACTGATAAGGTCACCTACT+CGG - Chr2:20075153-20075172 MsG0280007754.01.T01:CDS 45.0%
CAGGAGATAATGCTGCTACA+TGG - Chr2:20076705-20076724 MsG0280007754.01.T01:CDS 45.0%
CAGGCAAGAGCTTTACCTTT+GGG - Chr2:20077186-20077205 MsG0280007754.01.T01:intron 45.0%
CAGTAGACCACCTTGATAGA+AGG + Chr2:20075252-20075271 None:intergenic 45.0%
CATATATCCGCTCCAACCAT+AGG + Chr2:20076785-20076804 None:intergenic 45.0%
CTGGCAAGTATACAGCTCAT+TGG - Chr2:20076681-20076700 MsG0280007754.01.T01:CDS 45.0%
GCATACCCCTTGAAGTTATG+TGG - Chr2:20075743-20075762 MsG0280007754.01.T01:CDS 45.0%
GGACAAGCCCCTAATTAGTT+AGG - Chr2:20075441-20075460 MsG0280007754.01.T01:intron 45.0%
GGGTTGTCATGGTTTGAATG+TGG + Chr2:20076458-20076477 None:intergenic 45.0%
GTAGTAGCAGAGCTACAACA+TGG - Chr2:20075969-20075988 MsG0280007754.01.T01:CDS 45.0%
GTGAGAAAGGGTTCATCTGA+TGG - Chr2:20074644-20074663 MsG0280007754.01.T01:CDS 45.0%
TACAAATGTCACTCCCCACT+TGG - Chr2:20078297-20078316 MsG0280007754.01.T01:CDS 45.0%
TAGTATTGCAGGCACATTGC+CGG + Chr2:20076051-20076070 None:intergenic 45.0%
TATCTAGGTGAAGTTTGGCC+TGG - Chr2:20076287-20076306 MsG0280007754.01.T01:CDS 45.0%
TCAGGCAAGAGCTTTACCTT+TGG - Chr2:20077185-20077204 MsG0280007754.01.T01:intron 45.0%
TCAGGGTTTAAAGGGTCTTC+TGG + Chr2:20074422-20074441 None:intergenic 45.0%
TCGTATGTCGTGATATCCTC+GGG + Chr2:20077340-20077359 None:intergenic 45.0%
TCTCAGACGTTACAACAAGG+AGG + Chr2:20075045-20075064 None:intergenic 45.0%
TGTAAGTGATGTCGAAGGTG+TGG - Chr2:20075699-20075718 MsG0280007754.01.T01:CDS 45.0%
! GTGGATGCTATCCGATTTTG+AGG + Chr2:20076873-20076892 None:intergenic 45.0%
! GTGGTTTGCAACAACGGTTA+CGG + Chr2:20075347-20075366 None:intergenic 45.0%
!! AGCTCTTTTTGAAGGCAGAG+AGG + Chr2:20074486-20074505 None:intergenic 45.0%
!! TGCTGGTTCATCTCCTGAAT+TGG - Chr2:20074789-20074808 MsG0280007754.01.T01:CDS 45.0%
AAGAAAAGTGGCCGCGCAAT+TGG + Chr2:20077310-20077329 None:intergenic 50.0%
ACTGCACCAGATTGTAGCAC+AGG + Chr2:20077406-20077425 None:intergenic 50.0%
ATGGAAGAAGGCGGTAACGA+AGG + Chr2:20077246-20077265 None:intergenic 50.0%
CAAAAGGGACACCAATTGCG+CGG - Chr2:20077296-20077315 MsG0280007754.01.T01:intron 50.0%
CAGTCGACCTTCTATCAAGG+TGG - Chr2:20075242-20075261 MsG0280007754.01.T01:CDS 50.0%
CCACAGTCGACCTTCTATCA+AGG - Chr2:20075239-20075258 MsG0280007754.01.T01:CDS 50.0%
CCTTGATAGAAGGTCGACTG+TGG + Chr2:20075242-20075261 None:intergenic 50.0%
CGTATGTCGTGATATCCTCG+GGG + Chr2:20077339-20077358 None:intergenic 50.0%
GACCAATAAGGCATAGGAGC+AGG + Chr2:20074847-20074866 None:intergenic 50.0%
GGTGAGGCTCTTGATCTAGA+AGG - Chr2:20077682-20077701 MsG0280007754.01.T01:CDS 50.0%
GTAGCAGAGCTACAACATGG+CGG - Chr2:20075972-20075991 MsG0280007754.01.T01:CDS 50.0%
GTCTCACCTGTGCTACAATC+TGG - Chr2:20077397-20077416 MsG0280007754.01.T01:intron 50.0%
TGAGTCCCGTCAGATGTCAT+TGG - Chr2:20075188-20075207 MsG0280007754.01.T01:CDS 50.0%
TGGAAGAAGGCGGTAACGAA+GGG + Chr2:20077245-20077264 None:intergenic 50.0%
TGGAGTTCCTATGGTTGGAG+CGG - Chr2:20076775-20076794 MsG0280007754.01.T01:CDS 50.0%
ACGGTTACGGCCACAACGTA+AGG + Chr2:20075334-20075353 None:intergenic 55.0%
CGGTTACGGCCACAACGTAA+GGG + Chr2:20075333-20075352 None:intergenic 55.0%
CTGAAGAACTATGTCGGCGC+TGG - Chr2:20076825-20076844 MsG0280007754.01.T01:CDS 55.0%
GGCCTGCTCCTATGCCTTAT+TGG - Chr2:20074842-20074861 MsG0280007754.01.T01:CDS 55.0%
GTGAAAAGTGGGGCCACACA+TGG - Chr2:20074671-20074690 MsG0280007754.01.T01:CDS 55.0%
! ACTATGTCGGCGCTGGATTC+AGG - Chr2:20076832-20076851 MsG0280007754.01.T01:CDS 55.0%
! TGAGGTGTTCCGAGCTGCTT+TGG + Chr2:20077599-20077618 None:intergenic 55.0%
AAGGTCACCTACTCGGCCGT+GGG - Chr2:20075160-20075179 MsG0280007754.01.T01:CDS 60.0%
GACGGGACTCATCATCCCCA+CGG + Chr2:20075179-20075198 None:intergenic 60.0%
TAAGGTCACCTACTCGGCCG+TGG - Chr2:20075159-20075178 MsG0280007754.01.T01:CDS 60.0%
TGCAGGCACATTGCCGGACT+AGG + Chr2:20076045-20076064 None:intergenic 60.0%
AGGTCACCTACTCGGCCGTG+GGG - Chr2:20075161-20075180 MsG0280007754.01.T01:CDS 65.0%
CATCATCCCCACGGCCGAGT+AGG + Chr2:20075170-20075189 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 20074218 20078319 20074218 ID=MsG0280007754.01;Name=MsG0280007754.01
Chr2 mRNA 20074218 20078319 20074218 ID=MsG0280007754.01.T01;Parent=MsG0280007754.01;Name=MsG0280007754.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0.75|0.6|1|1|1|5|284|788
Chr2 exon 20074218 20075401 20074218 ID=MsG0280007754.01.T01:exon:4741;Parent=MsG0280007754.01.T01
Chr2 exon 20075684 20076330 20075684 ID=MsG0280007754.01.T01:exon:4740;Parent=MsG0280007754.01.T01
Chr2 exon 20076639 20076869 20076639 ID=MsG0280007754.01.T01:exon:4739;Parent=MsG0280007754.01.T01
Chr2 exon 20077666 20077714 20077666 ID=MsG0280007754.01.T01:exon:4738;Parent=MsG0280007754.01.T01
Chr2 exon 20077780 20078319 20077780 ID=MsG0280007754.01.T01:exon:4737;Parent=MsG0280007754.01.T01
Chr2 CDS 20077780 20078319 20077780 ID=MsG0280007754.01.T01:cds;Parent=MsG0280007754.01.T01
Chr2 CDS 20077666 20077714 20077666 ID=MsG0280007754.01.T01:cds;Parent=MsG0280007754.01.T01
Chr2 CDS 20076639 20076869 20076639 ID=MsG0280007754.01.T01:cds;Parent=MsG0280007754.01.T01
Chr2 CDS 20075684 20076330 20075684 ID=MsG0280007754.01.T01:cds;Parent=MsG0280007754.01.T01
Chr2 CDS 20074502 20075401 20074502 ID=MsG0280007754.01.T01:cds;Parent=MsG0280007754.01.T01
Chr2 three_prime_UTR 20074218 20074501 20074218 ID=MsG0280007754.01.T01:three_prime_utr;Parent=MsG0280007754.01.T01
Gene Sequence

>MsG0280007754.01.T01

ATGGGAAATTCCAGAAGAAGTGATTCCAAGAGTCTCATCATCTTCATCTCTATCTCATCATTTTCGCCACCAAAATTCGCAAAACTCAAAATACATAATTACACATCCAAACTCAGACCTTATCTTCACACTCCACAACACAACTCATTTGGTTTCACTATCACGCGTAAATCCAACAAAGATATACTCTTTAACACTTTACCAGAAGACCCTTTAAACCCTGAAACATTTCTAGTCTTTAAGGAACAGTACTTGCAGCTTTCTTCCTCTCTGCCTTCAAAAAGAGCTTCTCTGTATGGTTTTGGAGAGCATACAAAGAGTTCATTCAAGTTGCAAGCAAACCAAACTTTCACTCTTTGGAATGAAGATATTGGTAGTTCCAATGTTGATGTGAATCTTTATGGCTCTCATCCATTTTATTTGGATGTGAGAAAGGGTTCATCTGATGGAAGAGTGAAAAGTGGGGCCACACATGGTGTTTTACTTCTTAATAGTAATGGAATGGATGTTGAATATAGCGGTGATCGTCTTACTTATAAGTATACTCAGTTCATTGGTAGGCCTGCTCCTATGCCTTATTGGTCTTTTGGTTTTCATCAATGTCGATATGGCTACAAGAATGTAAGTGATGTCGAAGGTGTGGTAACCAACTATGCAAAAGCTGGCATACCCCTTGAAGTTATGTGGACAGATATTGATTACATGGATGCATATAAAGATTTCACACTAGATCCTGTTAATTTTCCGCAAGATAAGATGATAAGTTTTGTTGATACCCTTCACAAAAATGGTCAGAAATATGTGCTTATCTTGGATCCAGGTATCAGTATAAATACTACGTATGCAACCTATGTTAGAGGTTTGCAAGCTGGTGTATATATAAAGAGAAATGGAGTCAACTATCTAGGTGAAGTTTGGCCTGGACAAGTTTACTATCCTGATTTTCTTAATCCTAATAGTCAAGAATTTTGGGCTGAAGAAATCAAATTATTTAATGACATTCTCCCTTTTGATGGTCTTTGGCTTGACATGAATGAGTTATCTAATTTCATAACTTCAAATGACACTCCACATTCAAACCATGACAACCCTCCTTACAAAATTAACAGTTCTGGCGTTCAACGACCAATTAACGAGAAAACTGTTCCAGCAACATCTTTACATTATGGTAATATCACTGAGTATGATTCTCACAATTTGTATGGTCTCTTAGAATCCAAAACAACCAACAAGGCCTTAGTGGAAATAACTGGTAAAAGGCCATTCATTTTGAGTAGATCAACTTTTGTTAGCTCTGGCAAGTATACAGCTCATTGGACAGGAGATAATGCTGCTACATGGAATGATTTAGCATACTCAATCCCTTCAATATTGAACTTTGGAATCTTTGGAGTTCCTATGGTTGGAGCGGATATATGCGGCTTCTCAGCAGACACTACTGAAGAACTATGTCGGCGCTGGATTCAGTTAGGGGCCTTTTACCCCTTTGCAAGAGATCATTCAGATAAAAATTCCATCAGGCAAGAGCTTTACCTTTGGGATTCAGTTGCAGCATCAGCTCGAAAAGTGCTTGCCCTTCGTTACCGCCTTCTTCCATATTTCTACACACTAATGTACGAATCAAACACAAAAGGGACACCAATTGCGCGGCCACTTTTCTTTTCATTCCCCGAGGATATCACGACATACGAAATAAACTCACAGTTTCTATTAGGCAAAGGTGTTCTAGTCTCACCTGTGCTACAATCTGGTGCAGTTACTGTTGATGCATACTTTCCTAAAGGAAATTGGTTTGATCTCTTTAATCCCTCAAATTCAGTGAGTGCCAAATCAGGCAAATATGTCAAACTTGATGCACCATCTGATCACATAAATGTGCATGTTGGCGAAGGTAACATTTTGGCCTTACAAGGTGAAGCAATGACAACCAAAGCAGCTCGGAACACCTCATTCGAACTATTGGTTGTTTTAAGTGGAAATGGAAATAGTTATGGACAAGTTTATTTGGATGATGGTGAGGCTCTTGATCTAGAAGGAGAGAAAGATCAATGGACACTTGTGAGATTTTATGGTACACTGTATAATGATAGTGTTTCTGTTACTTCTAATGTTACTAATGGAAAATTTGCTTTGGACCAAAAATGGATCATAGAAAAGGTTACATTCTTGGGGATACCTAATTATGGTAGGTTAAATGGAAATGATTTGTCTGAGAGTGAGTTAAATGTTGTGAGTGGAATGAATTCAATGAGGAAAAGAGTTTTGATCACAAAATTTGATAGGTCTTCTAAGTTTGTTACTGTGGAAGTTTCAAATTTAAAACAGCTTATAGGAGAGCAGTTTGAACTGAAGACTAAAATAAGGTAG

Protein sequence

>MsG0280007754.01.T01

MGNSRRSDSKSLIIFISISSFSPPKFAKLKIHNYTSKLRPYLHTPQHNSFGFTITRKSNKDILFNTLPEDPLNPETFLVFKEQYLQLSSSLPSKRASLYGFGEHTKSSFKLQANQTFTLWNEDIGSSNVDVNLYGSHPFYLDVRKGSSDGRVKSGATHGVLLLNSNGMDVEYSGDRLTYKYTQFIGRPAPMPYWSFGFHQCRYGYKNVSDVEGVVTNYAKAGIPLEVMWTDIDYMDAYKDFTLDPVNFPQDKMISFVDTLHKNGQKYVLILDPGISINTTYATYVRGLQAGVYIKRNGVNYLGEVWPGQVYYPDFLNPNSQEFWAEEIKLFNDILPFDGLWLDMNELSNFITSNDTPHSNHDNPPYKINSSGVQRPINEKTVPATSLHYGNITEYDSHNLYGLLESKTTNKALVEITGKRPFILSRSTFVSSGKYTAHWTGDNAATWNDLAYSIPSILNFGIFGVPMVGADICGFSADTTEELCRRWIQLGAFYPFARDHSDKNSIRQELYLWDSVAASARKVLALRYRLLPYFYTLMYESNTKGTPIARPLFFSFPEDITTYEINSQFLLGKGVLVSPVLQSGAVTVDAYFPKGNWFDLFNPSNSVSAKSGKYVKLDAPSDHINVHVGEGNILALQGEAMTTKAARNTSFELLVVLSGNGNSYGQVYLDDGEALDLEGEKDQWTLVRFYGTLYNDSVSVTSNVTNGKFALDQKWIIEKVTFLGIPNYGRLNGNDLSESELNVVSGMNSMRKRVLITKFDRSSKFVTVEVSNLKQLIGEQFELKTKIR*