Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015919.01.T01 | KEH35126.1 | 79.091 | 110 | 12 | 2 | 49 | 151 | 191 | 296 | 3.34E-48 | 167 |
MsG0380015919.01.T01 | KEH35126.1 | 57.746 | 71 | 28 | 1 | 1 | 69 | 50 | 120 | 2.95E-13 | 76.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015919.01.T01 | A0A072V090 | 79.091 | 110 | 12 | 2 | 49 | 151 | 191 | 296 | 1.59e-48 | 167 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000599.01 | MsG0380015919.01 | 0.843395 | 1.438886e-58 | 2.248479e-55 |
MsG0180000977.01 | MsG0380015919.01 | 0.816581 | 5.138110e-52 | 3.654965e-49 |
MsG0180001100.01 | MsG0380015919.01 | 0.821681 | 3.548870e-53 | 2.906974e-50 |
MsG0180002399.01 | MsG0380015919.01 | 0.804113 | 2.524000e-49 | 1.290594e-46 |
MsG0180004103.01 | MsG0380015919.01 | 0.809733 | 1.634998e-50 | 9.675550e-48 |
MsG0180004106.01 | MsG0380015919.01 | 0.817509 | 3.177788e-52 | 2.318853e-49 |
MsG0180004246.01 | MsG0380015919.01 | 0.818629 | 1.774305e-52 | 1.335092e-49 |
MsG0180004518.01 | MsG0380015919.01 | 0.805272 | 1.446100e-49 | 7.617897e-47 |
MsG0180004735.01 | MsG0380015919.01 | 0.805057 | 1.603726e-49 | 8.402142e-47 |
MsG0180004934.01 | MsG0380015919.01 | 0.808337 | 3.255033e-50 | 1.856273e-47 |
MsG0180005807.01 | MsG0380015919.01 | 0.805140 | 1.541537e-49 | 8.093435e-47 |
MsG0180006136.01 | MsG0380015919.01 | 0.812032 | 5.199259e-51 | 3.269468e-48 |
MsG0280010564.01 | MsG0380015919.01 | 0.802373 | 5.785252e-49 | 2.829363e-46 |
MsG0280010916.01 | MsG0380015919.01 | 0.807807 | 4.220737e-50 | 2.373535e-47 |
MsG0280011073.01 | MsG0380015919.01 | 0.815656 | 8.268322e-52 | 5.734934e-49 |
MsG0380012011.01 | MsG0380015919.01 | 0.819725 | 9.986038e-53 | 7.746613e-50 |
MsG0380014386.01 | MsG0380015919.01 | 0.818510 | 1.887719e-52 | 1.415854e-49 |
MsG0380014909.01 | MsG0380015919.01 | 0.810625 | 1.050116e-50 | 6.361685e-48 |
MsG0380015372.01 | MsG0380015919.01 | 0.805961 | 1.036446e-49 | 5.557717e-47 |
MsG0380015438.01 | MsG0380015919.01 | 0.801415 | 9.104207e-49 | 4.345219e-46 |
MsG0380015884.01 | MsG0380015919.01 | 0.817806 | 2.724274e-52 | 2.004141e-49 |
MsG0380015885.01 | MsG0380015919.01 | 0.800287 | 1.546968e-48 | 7.175763e-46 |
MsG0380015891.01 | MsG0380015919.01 | 0.800723 | 1.260602e-48 | 5.912208e-46 |
MsG0380015896.01 | MsG0380015919.01 | 0.816661 | 4.928657e-52 | 3.513859e-49 |
MsG0380015919.01 | MsG0380015920.01 | 0.955298 | 4.180271e-113 | 1.252474e-107 |
MsG0380015919.01 | MsG0380017338.01 | 0.815698 | 8.092544e-52 | 5.619350e-49 |
MsG0380015919.01 | MsG0380017931.01 | 0.803740 | 3.018148e-49 | 1.528517e-46 |
MsG0380015919.01 | MsG0380018037.01 | 0.810160 | 1.323063e-50 | 7.917196e-48 |
MsG0380015919.01 | MsG0480019197.01 | 0.809846 | 1.546512e-50 | 9.178675e-48 |
MsG0380015919.01 | MsG0480020024.01 | 0.814968 | 1.175459e-51 | 8.000760e-49 |
MsG0380015919.01 | MsG0480020229.01 | 0.806486 | 8.035499e-50 | 4.366803e-47 |
MsG0380015919.01 | MsG0480020890.01 | 0.803251 | 3.810591e-49 | 1.905730e-46 |
MsG0380015919.01 | MsG0480022537.01 | 0.816121 | 6.510972e-52 | 4.573759e-49 |
MsG0380015919.01 | MsG0480022624.01 | 0.801487 | 8.800077e-49 | 4.207772e-46 |
MsG0380015919.01 | MsG0480022918.01 | 0.811425 | 7.048274e-51 | 4.361501e-48 |
MsG0380015919.01 | MsG0580024340.01 | 0.825175 | 5.410213e-54 | 4.894839e-51 |
MsG0380015919.01 | MsG0580024759.01 | 0.816099 | 6.583675e-52 | 4.622309e-49 |
MsG0380015919.01 | MsG0580027394.01 | 0.814000 | 1.924556e-51 | 1.276118e-48 |
MsG0380015919.01 | MsG0580029912.01 | 0.801138 | 1.037090e-48 | 4.915683e-46 |
MsG0380015919.01 | MsG0680030464.01 | 0.801622 | 8.256601e-49 | 3.961189e-46 |
MsG0380015919.01 | MsG0680030515.01 | 0.800834 | 1.196655e-48 | 5.628242e-46 |
MsG0380015919.01 | MsG0680030680.01 | 0.827855 | 1.242545e-54 | 1.214245e-51 |
MsG0380015919.01 | MsG0680030858.01 | 0.810141 | 1.335823e-50 | 7.989542e-48 |
MsG0380015919.01 | MsG0680030905.01 | 0.820052 | 8.407139e-53 | 6.581913e-50 |
MsG0380015919.01 | MsG0680032006.01 | 0.814119 | 1.811782e-51 | 1.205215e-48 |
MsG0380015919.01 | MsG0680032254.01 | 0.812991 | 3.208362e-51 | 2.069937e-48 |
MsG0380015919.01 | MsG0680032413.01 | 0.804244 | 2.370877e-49 | 1.216285e-46 |
MsG0380015919.01 | MsG0680032830.01 | 0.803777 | 2.964404e-49 | 1.502721e-46 |
MsG0380015919.01 | MsG0780037701.01 | 0.801367 | 9.308702e-49 | 4.437685e-46 |
MsG0380015919.01 | MsG0780039186.01 | 0.811741 | 6.015043e-51 | 3.753251e-48 |
MsG0380015919.01 | MsG0780039438.01 | 0.823498 | 1.341395e-53 | 1.156979e-50 |
MsG0380015919.01 | MsG0780039975.01 | 0.808300 | 3.313880e-50 | 1.887965e-47 |
MsG0380015919.01 | MsG0780040278.01 | 0.844092 | 9.365974e-59 | 1.495751e-55 |
MsG0380015919.01 | MsG0880042022.01 | 0.808536 | 2.950967e-50 | 1.691634e-47 |
MsG0380015919.01 | MsG0880042044.01 | 0.803252 | 3.808853e-49 | 1.904917e-46 |
MsG0380015919.01 | MsG0880043249.01 | 0.803469 | 3.434226e-49 | 1.727166e-46 |
MsG0380015919.01 | MsG0880043278.01 | 0.802399 | 5.713913e-49 | 2.796310e-46 |
MsG0380015919.01 | MsG0880044487.01 | 0.804627 | 1.973168e-49 | 1.022298e-46 |
MsG0380015919.01 | MsG0880045668.01 | 0.801281 | 9.696138e-49 | 4.612290e-46 |
MsG0380015919.01 | MsG0880045992.01 | 0.813140 | 2.975960e-51 | 1.927600e-48 |
MsG0380015919.01 | MsG0880046200.01 | 0.806197 | 9.245418e-50 | 4.987545e-47 |
MsG0380015919.01 | MsG0880047394.01 | 0.813032 | 3.143153e-51 | 2.030061e-48 |
MsG0380015919.01 | MsG0880047770.01 | 0.801485 | 8.808016e-49 | 4.211378e-46 |
MsG0280006914.01 | MsG0380015919.01 | 0.816520 | 5.302101e-52 | 3.765304e-49 |
MsG0280006919.01 | MsG0380015919.01 | 0.823055 | 1.701486e-53 | 1.449394e-50 |
MsG0280007480.01 | MsG0380015919.01 | 0.804628 | 1.972236e-49 | 1.021844e-46 |
MsG0280009256.01 | MsG0380015919.01 | 0.822104 | 2.831536e-53 | 2.347387e-50 |
MsG0280009507.01 | MsG0380015919.01 | 0.802154 | 6.418288e-49 | 3.121337e-46 |
MsG0280009755.01 | MsG0380015919.01 | 0.810887 | 9.218614e-51 | 5.624179e-48 |
MsG0280009756.01 | MsG0380015919.01 | 0.836091 | 1.146539e-56 | 1.429966e-53 |
MsG0280010353.01 | MsG0380015919.01 | 0.807798 | 4.239052e-50 | 2.383308e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015919.01.T01 | MTR_3g079783 | 79.091 | 110 | 12 | 2 | 49 | 151 | 191 | 296 | 4.04e-52 | 167 |
MsG0380015919.01.T01 | MTR_3g079783 | 57.746 | 71 | 28 | 1 | 1 | 69 | 50 | 120 | 3.57e-17 | 76.6 |
MsG0380015919.01.T01 | MTR_3g079820 | 68.868 | 106 | 21 | 4 | 53 | 151 | 28 | 128 | 3.31e-37 | 124 |
MsG0380015919.01.T01 | MTR_3g079780 | 47.945 | 73 | 36 | 1 | 1 | 71 | 54 | 126 | 9.12e-14 | 67.8 |
MsG0380015919.01.T01 | MTR_2g037150 | 64.583 | 48 | 17 | 0 | 1 | 48 | 54 | 101 | 1.92e-13 | 63.9 |
MsG0380015919.01.T01 | MTR_4g036080 | 64.583 | 48 | 17 | 0 | 1 | 48 | 52 | 99 | 6.27e-13 | 65.5 |
MsG0380015919.01.T01 | MTR_3g079790 | 44.828 | 87 | 41 | 2 | 1 | 85 | 114 | 195 | 1.12e-12 | 64.7 |
MsG0380015919.01.T01 | MTR_2g037140 | 64.583 | 48 | 17 | 0 | 1 | 48 | 156 | 203 | 1.36e-12 | 64.7 |
MsG0380015919.01.T01 | MTR_3g079787 | 84.211 | 38 | 6 | 0 | 1 | 38 | 54 | 91 | 1.44e-12 | 60.1 |
MsG0380015919.01.T01 | MTR_0570s0040 | 70.000 | 40 | 12 | 0 | 1 | 40 | 51 | 90 | 4.48e-12 | 60.8 |
MsG0380015919.01.T01 | MTR_6g015775 | 34.444 | 90 | 57 | 1 | 1 | 88 | 52 | 141 | 6.38e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015919.01.T01 | AT5G20935 | 60.000 | 85 | 27 | 3 | 67 | 149 | 38 | 117 | 3.24e-24 | 91.3 |
Find 6 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGAAGGTTATAACATTTA+TGG | 0.184412 | 3:-76641305 | MsG0380015919.01.T01:exon |
AAGACTATGCTTCTTCAAAA+TGG | 0.305839 | 3:-76641192 | MsG0380015919.01.T01:intron |
GACGACAGTGATCTTGAAAA+AGG | 0.350587 | 3:-76641283 | MsG0380015919.01.T01:exon |
ATCACTAAACAAAGCCATTG+AGG | 0.543331 | 3:-76641245 | MsG0380015919.01.T01:exon |
AGATGTGTATGACTCCTCAA+TGG | 0.569825 | 3:+76641231 | None:intergenic |
CTACGATGCTCTGAGCAAGA+AGG | 0.590455 | 3:-76641320 | MsG0380015920.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGTAATCAAATAAAATTTA+TGG | + | Chr3:76640421-76640440 | None:intergenic | 10.0% |
!! | TTGTCTAAAGATTAATTAAT+TGG | + | Chr3:76641004-76641023 | None:intergenic | 15.0% |
!! | ATGACATGAATATATACATT+GGG | + | Chr3:76640316-76640335 | None:intergenic | 20.0% |
!! | ATTGGAACTTATATTATTGA+TGG | - | Chr3:76641160-76641179 | MsG0380015919.01.T01:intron | 20.0% |
! | CAAGAAGGTTATAACATTTA+TGG | - | Chr3:76639845-76639864 | MsG0380015919.01.T01:exon | 25.0% |
! | CAATGTATATATTCATGTCA+TGG | - | Chr3:76640315-76640334 | MsG0380015919.01.T01:CDS | 25.0% |
! | CATGACATGAATATATACAT+TGG | + | Chr3:76640317-76640336 | None:intergenic | 25.0% |
! | GAATAACCATACATAAATTG+TGG | - | Chr3:76641231-76641250 | MsG0380015919.01.T01:exon | 25.0% |
! | GATAAAGTTATAAACAGTGT+AGG | - | Chr3:76640608-76640627 | MsG0380015919.01.T01:intron | 25.0% |
! | TGATGAAAAATTAAGAGATG+AGG | + | Chr3:76640909-76640928 | None:intergenic | 25.0% |
!! | CATTATCTTCACTATGTTTT+TGG | - | Chr3:76640343-76640362 | MsG0380015919.01.T01:CDS | 25.0% |
AAAAAAGCAAGAAGATGTGT+GGG | - | Chr3:76641123-76641142 | MsG0380015919.01.T01:intron | 30.0% | |
AAACGTTCAAAGTTGGATAA+AGG | - | Chr3:76640773-76640792 | MsG0380015919.01.T01:intron | 30.0% | |
AACGTTCAAAGTTGGATAAA+GGG | - | Chr3:76640774-76640793 | MsG0380015919.01.T01:intron | 30.0% | |
AAGACTATGCTTCTTCAAAA+TGG | - | Chr3:76639958-76639977 | MsG0380015919.01.T01:CDS | 30.0% | |
AATCCTATCATATGAATGAG+GGG | + | Chr3:76640474-76640493 | None:intergenic | 30.0% | |
AGCAAATCAACTGGAATATT+TGG | + | Chr3:76640722-76640741 | None:intergenic | 30.0% | |
ATATTTCAAGCCCTTAGATA+TGG | - | Chr3:76641186-76641205 | MsG0380015919.01.T01:intron | 30.0% | |
ATCTGATATTTCACTTCTGA+TGG | + | Chr3:76640065-76640084 | None:intergenic | 30.0% | |
CAAAGTCCACAATTTATGTA+TGG | + | Chr3:76641240-76641259 | None:intergenic | 30.0% | |
CAATCCTATCATATGAATGA+GGG | + | Chr3:76640475-76640494 | None:intergenic | 30.0% | |
CAGAAGTGAAATATCAGATT+GGG | - | Chr3:76640066-76640085 | MsG0380015919.01.T01:intron | 30.0% | |
CTAGAATGCAAAAAAGAGTT+GGG | - | Chr3:76640005-76640024 | MsG0380015919.01.T01:CDS | 30.0% | |
GGAGCTTCAATGATAATAAT+GGG | + | Chr3:76640803-76640822 | None:intergenic | 30.0% | |
GTAAAGACAAGTTGCAAAAA+TGG | - | Chr3:76640213-76640232 | MsG0380015919.01.T01:intron | 30.0% | |
TAGAATGCAAAAAAGAGTTG+GGG | - | Chr3:76640006-76640025 | MsG0380015919.01.T01:CDS | 30.0% | |
TCAATCCTATCATATGAATG+AGG | + | Chr3:76640476-76640495 | None:intergenic | 30.0% | |
TCAGAAGTGAAATATCAGAT+TGG | - | Chr3:76640065-76640084 | MsG0380015919.01.T01:intron | 30.0% | |
TGGAGCTTCAATGATAATAA+TGG | + | Chr3:76640804-76640823 | None:intergenic | 30.0% | |
! | AAATATCAGATTGGGAGTTT+TGG | - | Chr3:76640074-76640093 | MsG0380015919.01.T01:intron | 30.0% |
! | AATATCAGATTGGGAGTTTT+GGG | - | Chr3:76640075-76640094 | MsG0380015919.01.T01:intron | 30.0% |
! | ATTGTGATACCTGTTTTCTA+CGG | - | Chr3:76640032-76640051 | MsG0380015919.01.T01:CDS | 30.0% |
! | CTGGGCAAGATTTTATAAAA+CGG | - | Chr3:76640171-76640190 | MsG0380015919.01.T01:intron | 30.0% |
! | TCTAGAATGCAAAAAAGAGT+TGG | - | Chr3:76640004-76640023 | MsG0380015919.01.T01:CDS | 30.0% |
! | TGGGCAAGATTTTATAAAAC+GGG | - | Chr3:76640172-76640191 | MsG0380015919.01.T01:intron | 30.0% |
AAAAGGAAAGATGCTCTAAC+TGG | - | Chr3:76640152-76640171 | MsG0380015919.01.T01:intron | 35.0% | |
AAAGGAAAGATGCTCTAACT+GGG | - | Chr3:76640153-76640172 | MsG0380015919.01.T01:intron | 35.0% | |
ACGTTTGTACAAGCCAAAAT+TGG | + | Chr3:76640864-76640883 | None:intergenic | 35.0% | |
ATAGTAGAGCAAGAAGAACA+AGG | + | Chr3:76640393-76640412 | None:intergenic | 35.0% | |
ATCACTAAACAAAGCCATTG+AGG | - | Chr3:76639905-76639924 | MsG0380015919.01.T01:exon | 35.0% | |
ATCCTATCATATGAATGAGG+GGG | + | Chr3:76640473-76640492 | None:intergenic | 35.0% | |
ATTGTTTGCCAACAACTAGA+TGG | - | Chr3:76641264-76641283 | MsG0380015919.01.T01:exon | 35.0% | |
CAAAAAAGCAAGAAGATGTG+TGG | - | Chr3:76641122-76641141 | MsG0380015919.01.T01:intron | 35.0% | |
CGTTTGTACAAGCCAAAATT+GGG | + | Chr3:76640863-76640882 | None:intergenic | 35.0% | |
CTATACTCAGCCATATCTAA+GGG | + | Chr3:76641199-76641218 | None:intergenic | 35.0% | |
GACAAGTTGCAAAAATGGAA+AGG | - | Chr3:76640218-76640237 | MsG0380015919.01.T01:intron | 35.0% | |
GCAAGAAAAACGTTCAAAGT+TGG | - | Chr3:76640766-76640785 | MsG0380015919.01.T01:intron | 35.0% | |
GCAGTAGCAACTAATTGATT+TGG | - | Chr3:76640960-76640979 | MsG0380015919.01.T01:intron | 35.0% | |
GGAATATTTGGTATCTGTTG+TGG | + | Chr3:76640710-76640729 | None:intergenic | 35.0% | |
GGATTTATTCCGTAGAAAAC+AGG | + | Chr3:76640044-76640063 | None:intergenic | 35.0% | |
GTTTGTACAAGCCAAAATTG+GGG | + | Chr3:76640862-76640881 | None:intergenic | 35.0% | |
TATCATTGAAGCTCCAAAGA+TGG | - | Chr3:76640808-76640827 | MsG0380015919.01.T01:intron | 35.0% | |
! | ATATCAGATTGGGAGTTTTG+GGG | - | Chr3:76640076-76640095 | MsG0380015919.01.T01:intron | 35.0% |
! | CGTTTTTCTTGCAACTCTTT+TGG | + | Chr3:76640758-76640777 | None:intergenic | 35.0% |
!! | ATATTCCAGTTGATTTGCTG+AGG | - | Chr3:76640723-76640742 | MsG0380015919.01.T01:intron | 35.0% |
!!! | AATTTTGGCTTGTACAAACG+TGG | - | Chr3:76640863-76640882 | MsG0380015919.01.T01:intron | 35.0% |
!!! | CTGTTGTGGAACATTGATTT+TGG | + | Chr3:76640696-76640715 | None:intergenic | 35.0% |
AATACGTGCCATCTAGTTGT+TGG | + | Chr3:76641275-76641294 | None:intergenic | 40.0% | |
ACCAAGCCATATTTGAAGGT+CGG | - | Chr3:76640668-76640687 | MsG0380015919.01.T01:intron | 40.0% | |
AGATGTGTATGACTCCTCAA+TGG | + | Chr3:76639922-76639941 | None:intergenic | 40.0% | |
ATATGAATGAGGGGGAAAGA+AGG | + | Chr3:76640465-76640484 | None:intergenic | 40.0% | |
GACGACAGTGATCTTGAAAA+AGG | - | Chr3:76639867-76639886 | MsG0380015919.01.T01:exon | 40.0% | |
GCTATACTCAGCCATATCTA+AGG | + | Chr3:76641200-76641219 | None:intergenic | 40.0% | |
GGTCAAAACTGCAGCTAATT+CGG | - | Chr3:76640829-76640848 | MsG0380015919.01.T01:intron | 40.0% | |
GTAGAAGCAACTTGCACAAA+AGG | - | Chr3:76640135-76640154 | MsG0380015919.01.T01:intron | 40.0% | |
TACCACCAAGCCATATTTGA+AGG | - | Chr3:76640664-76640683 | MsG0380015919.01.T01:intron | 40.0% | |
TGAAGAGAAATCGTCACTGA+AGG | - | Chr3:76640574-76640593 | MsG0380015919.01.T01:intron | 40.0% | |
TTCCCCCTCATTCATATGAT+AGG | - | Chr3:76640468-76640487 | MsG0380015919.01.T01:intron | 40.0% | |
! | TCGGTTTATTGCCCCAATTT+TGG | - | Chr3:76640848-76640867 | MsG0380015919.01.T01:intron | 40.0% |
! | TTGTACAAACGTGGTGATGT+TGG | - | Chr3:76640872-76640891 | MsG0380015919.01.T01:intron | 40.0% |
ATAGTCCCAACCAGCTAAGT+TGG | + | Chr3:76640261-76640280 | None:intergenic | 45.0% | |
GTTGGGACTATCGAAATTGC+AGG | - | Chr3:76640270-76640289 | MsG0380015919.01.T01:intron | 45.0% | |
! | ACAAACGTGGTGATGTTGGA+AGG | - | Chr3:76640876-76640895 | MsG0380015919.01.T01:intron | 45.0% |
! | CTTGGTGGTAGAGCAAGAAA+TGG | + | Chr3:76640654-76640673 | None:intergenic | 45.0% |
! | GACCTTCAAATATGGCTTGG+TGG | + | Chr3:76640669-76640688 | None:intergenic | 45.0% |
!! | GCTGCAGTTTTGACCATCTT+TGG | + | Chr3:76640824-76640843 | None:intergenic | 45.0% |
!! | TTGGTGCCGACCTTCAAATA+TGG | + | Chr3:76640677-76640696 | None:intergenic | 45.0% |
AAGAAGATGTGTGGGCAGTG+CGG | - | Chr3:76641131-76641150 | MsG0380015919.01.T01:intron | 50.0% | |
AAGCAGCCAACTTAGCTGGT+TGG | - | Chr3:76640252-76640271 | MsG0380015919.01.T01:intron | 50.0% | |
AGCAGCCAACTTAGCTGGTT+GGG | - | Chr3:76640253-76640272 | MsG0380015919.01.T01:intron | 50.0% | |
CGTGACCTCAGCAAATCAAC+TGG | + | Chr3:76640731-76640750 | None:intergenic | 50.0% | |
GCCGACCTTCAAATATGGCT+TGG | + | Chr3:76640672-76640691 | None:intergenic | 50.0% | |
TGTGAAGCAGCCAACTTAGC+TGG | - | Chr3:76640248-76640267 | MsG0380015919.01.T01:intron | 50.0% | |
TGGGCAGTGCGGCGCAGCAT+TGG | - | Chr3:76641142-76641161 | MsG0380015919.01.T01:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 76639839 | 76641333 | 76639839 | ID=MsG0380015919.01; |
Chr3 | mRNA | 76639839 | 76641333 | 76639839 | ID=MsG0380015919.01.T01;Parent=MsG0380015919.01 |
Chr3 | exon | 76639839 | 76640058 | 76639839 | ID=MsG0380015919.01.T01.exon;Parent=MsG0380015919.01.T01 |
Chr3 | CDS | 76639950 | 76640058 | 76639950 | ID=MsG0380015919.01.T01.cds;Parent=MsG0380015919.01.T01 |
Chr3 | CDS | 76640141 | 76640152 | 76640141 | ID=MsG0380015919.01.T01.cds;Parent=MsG0380015919.01.T01 |
Chr3 | exon | 76640141 | 76640152 | 76640141 | ID=MsG0380015919.01.T01.exon;Parent=MsG0380015919.01.T01 |
Chr3 | CDS | 76640275 | 76640456 | 76640275 | ID=MsG0380015919.01.T01.cds;Parent=MsG0380015919.01.T01 |
Chr3 | exon | 76640275 | 76640456 | 76640275 | ID=MsG0380015919.01.T01.exon;Parent=MsG0380015919.01.T01 |
Chr3 | CDS | 76640646 | 76640682 | 76640646 | ID=MsG0380015919.01.T01.cds;Parent=MsG0380015919.01.T01 |
Chr3 | exon | 76640646 | 76640682 | 76640646 | ID=MsG0380015919.01.T01.exon;Parent=MsG0380015919.01.T01 |
Chr3 | CDS | 76641193 | 76641308 | 76641193 | ID=MsG0380015919.01.T01.cds;Parent=MsG0380015919.01.T01 |
Chr3 | exon | 76641193 | 76641333 | 76641193 | ID=MsG0380015919.01.T01.exon;Parent=MsG0380015919.01.T01 |
Gene Sequence |
Protein sequence |