AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042044.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042044.01.T01 MTR_8g010130 91.562 320 12 1 1 305 1 320 0.0 570
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042044.01.T01 AT3G25470 61.111 288 86 5 18 289 15 292 2.71e-119 345

Find 83 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCACCTACATACATATT+TGG 0.107632 8:-3064262 None:intergenic
GGTAAAGTGGCTCTTGATTC+TGG 0.114453 8:+3064423 MsG0880042044.01.T01:CDS
CAACTGAGAATGTTGAATTT+TGG 0.150498 8:+3067679 MsG0880042044.01.T01:three_prime_UTR
AACCTGTTCCTGGGAGTTTA+AGG 0.152022 8:-3062029 None:intergenic
TTCAGAGAAGATTGTCCTTT+TGG 0.250871 8:+3067384 MsG0880042044.01.T01:three_prime_UTR
AGCACCTTTGTTATGGATTC+TGG 0.252241 8:-3067305 None:intergenic
TATGGTGCATCACATGTTTA+TGG 0.255448 8:+3064483 MsG0880042044.01.T01:CDS
TAAGATTCATTATTCACTTA+TGG 0.289736 8:+3067557 MsG0880042044.01.T01:three_prime_UTR
GACTTTCAGCACCTTTGTTA+TGG 0.297128 8:-3067312 None:intergenic
AGAGAGACAGAACCTGTTCC+TGG 0.318383 8:-3062039 None:intergenic
CTTGATTCTGGGCTGTCAAC+TGG 0.325101 8:+3064435 MsG0880042044.01.T01:CDS
ACTGACTGCTTACTTCAGTA+TGG 0.336135 8:+3064465 MsG0880042044.01.T01:CDS
TCTCCCACAAAATGTTGATT+TGG 0.339694 8:+3066085 MsG0880042044.01.T01:CDS
ATGAAAGCTTACTTCTTGAT+TGG 0.353202 8:-3062318 None:intergenic
CTTCACCTACATACATATTT+GGG 0.353556 8:-3064261 None:intergenic
ACAAAAGGAGTAGAGAGTTT+TGG 0.357615 8:+3067208 MsG0880042044.01.T01:CDS
CGCTTTGTAAACCTCGTAAC+TGG 0.364745 8:-3061972 None:intergenic
TGATAAACATTATATCAAAA+AGG 0.372148 8:-3067658 None:intergenic
AATTTACCATTACCATTCAA+TGG 0.377143 8:-3067460 None:intergenic
TTCACTTATGGTTTCACCTA+TGG 0.377370 8:+3067569 MsG0880042044.01.T01:three_prime_UTR
ATGGTGCATCACATGTTTAT+GGG 0.384692 8:+3064484 MsG0880042044.01.T01:CDS
TGTATTGCTGATATTGTTCA+AGG 0.392466 8:-3063354 None:intergenic
TATGGGGTTGATGTAGGTTA+TGG 0.393906 8:+3064501 MsG0880042044.01.T01:CDS
GTAAAGTGGCTCTTGATTCT+GGG 0.401399 8:+3064424 MsG0880042044.01.T01:CDS
CCTGTATAGTAATGAGTTGT+TGG 0.401963 8:+3067435 MsG0880042044.01.T01:three_prime_UTR
CTAAAGGCACCTCTTCTAAC+TGG 0.413791 8:-3062261 None:intergenic
CATGTTTATGGGGTTGATGT+AGG 0.440941 8:+3064495 MsG0880042044.01.T01:CDS
GCAGGAAAAGTATATGTGAA+TGG 0.441623 8:+3064171 MsG0880042044.01.T01:intron
AACCTTAAACTCCCAGGAAC+AGG 0.443983 8:+3062027 MsG0880042044.01.T01:CDS
TGCAGTAGCATAGCTTCTAA+AGG 0.444449 8:-3062277 None:intergenic
TTCATAACATTTACCACAGC+AGG 0.450854 8:-3066489 None:intergenic
CCAACAACTCATTACTATAC+AGG 0.452142 8:-3067435 None:intergenic
CAGGAAAAGTATATGTGAAT+GGG 0.464845 8:+3064172 MsG0880042044.01.T01:intron
AGAGATGAATGAGAGGTCTA+AGG 0.476778 8:-3066111 None:intergenic
GATCTCCGAGCTTCAAATTG+TGG 0.489076 8:-3066543 None:intergenic
TAACAAGGAAAAGAAAGTTA+AGG 0.492483 8:-3062001 None:intergenic
AGCAAAATCAAATTCTATGA+AGG 0.493499 8:-3067628 None:intergenic
AAGCAGTGAGTAATATTAGC+TGG 0.495700 8:+3067527 MsG0880042044.01.T01:three_prime_UTR
ACACAGAGCTGGACATAAGT+TGG 0.499964 8:+3064365 MsG0880042044.01.T01:intron
AAGGAATTCTGTATTACCTT+CGG 0.502449 8:-3067272 None:intergenic
TTGGTTTCTGCAGCAAAGGT+TGG 0.516227 8:+3067227 MsG0880042044.01.T01:CDS
GAGAGACAGAACCTGTTCCT+GGG 0.520253 8:-3062038 None:intergenic
CAAAATCCATGACTGGATGA+TGG 0.526890 8:-3063383 None:intergenic
CTCATTCATCTCTATTCTAA+CGG 0.526964 8:+3066121 MsG0880042044.01.T01:CDS
TTTGTCAGACACAGGTGTAC+CGG 0.528102 8:-3064211 None:intergenic
TTGGTGCCATTGAATGGTAA+TGG 0.528635 8:+3067454 MsG0880042044.01.T01:three_prime_UTR
GTTCTCGAGAAGATTACAAA+AGG 0.529217 8:+3067193 MsG0880042044.01.T01:CDS
TTAAACCACAATTTGAAGCT+CGG 0.529956 8:+3066538 MsG0880042044.01.T01:CDS
AAAAGGACAATCTTCTCTGA+AGG 0.530050 8:-3067382 None:intergenic
CAGCTCGGTGTTGATGTTGC+TGG 0.536492 8:+3064402 MsG0880042044.01.T01:CDS
TTTCATTTGACTATAGCCAT+AGG 0.541883 8:-3067585 None:intergenic
GAGTTGTTGGTGCCATTGAA+TGG 0.542619 8:+3067448 MsG0880042044.01.T01:three_prime_UTR
AGATGCTGCATTAGTGACCT+TGG 0.544485 8:+3066515 MsG0880042044.01.T01:CDS
GATTCTGGGCTGTCAACTGG+AGG 0.546126 8:+3064438 MsG0880042044.01.T01:CDS
TTCAAATTGTGGTTTAACCA+AGG 0.550670 8:-3066532 None:intergenic
CACCTGCTACATCTTCCAAA+AGG 0.552630 8:-3067399 None:intergenic
TACCTTGCAAAATCCATGAC+TGG 0.558053 8:-3063390 None:intergenic
GAGTTTAAGGTTTCGTAACA+AGG 0.567840 8:-3062016 None:intergenic
TGCTGTGGTAAATGTTATGA+AGG 0.570448 8:+3066491 MsG0880042044.01.T01:CDS
GGTTGATGTAGGTTATGGAC+AGG 0.571071 8:+3064506 MsG0880042044.01.T01:CDS
AAGTTCCCAAATATGTATGT+AGG 0.572052 8:+3064256 MsG0880042044.01.T01:CDS
AAGTCATGAAGAAATTAGAA+AGG 0.572080 8:+3067330 MsG0880042044.01.T01:CDS
TTAACAGGTCATGCCTGCTG+TGG 0.572262 8:+3066476 MsG0880042044.01.T01:intron
TGGATTGAGTCTCCTCTCAA+AGG 0.573018 8:+3067247 MsG0880042044.01.T01:CDS
TTACGAAACCTTAAACTCCC+AGG 0.573327 8:+3062021 MsG0880042044.01.T01:CDS
TCTCCTCTCAAAGGTGCCGA+AGG 0.575320 8:+3067256 MsG0880042044.01.T01:CDS
TTACCTTCGGCACCTTTGAG+AGG 0.576438 8:-3067259 None:intergenic
GGGAAGAGAATATTTAAAGC+CGG 0.576887 8:+3064192 MsG0880042044.01.T01:CDS
ATCAACACCGAGCTGTTCGA+TGG 0.580117 8:-3064394 None:intergenic
GGATTCTGGTGAAGTGAACA+AGG 0.600096 8:-3067291 None:intergenic
AGTCAAATGAAAACTTGATG+AGG 0.609015 8:+3067596 MsG0880042044.01.T01:three_prime_UTR
GTAGATCCATCATCCAGTCA+TGG 0.609232 8:+3063377 MsG0880042044.01.T01:CDS
TGTTGATGTTGCTGGTAAAG+TGG 0.616155 8:+3064410 MsG0880042044.01.T01:CDS
GAAGGTGCCATCGAACAGCT+CGG 0.626010 8:+3064387 MsG0880042044.01.T01:CDS
TGTGTCTGACAAATCTGTTG+TGG 0.637551 8:+3064221 MsG0880042044.01.T01:CDS
TTAGAATAGAGATGAATGAG+AGG 0.646176 8:-3066118 None:intergenic
AGAGCTGGACATAAGTTGGA+AGG 0.646595 8:+3064369 MsG0880042044.01.T01:intron
TGGTGCATCACATGTTTATG+GGG 0.650359 8:+3064485 MsG0880042044.01.T01:CDS
ACAACAGATTTGTCAGACAC+AGG 0.652858 8:-3064219 None:intergenic
GGTCAAATACCAGTTAGAAG+AGG 0.671355 8:+3062252 MsG0880042044.01.T01:CDS
GTGAAGCAGAACCAGTTACG+AGG 0.675728 8:+3061961 MsG0880042044.01.T01:CDS
TTCACCAGAATCCATAACAA+AGG 0.678336 8:+3067301 MsG0880042044.01.T01:CDS
AACGTGTATCTATTATAGAG+CGG 0.683766 8:+3066039 MsG0880042044.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATAATATTTATTGGA+GGG - Chr8:3062098-3062117 None:intergenic 10.0%
!! AGATATATTATTTAGATAAA+TGG - Chr8:3065891-3065910 None:intergenic 10.0%
!! ATTAAATACACATATAAAAT+AGG - Chr8:3065240-3065259 None:intergenic 10.0%
!! TATTGATAAAATTGATAAAA+TGG - Chr8:3062437-3062456 None:intergenic 10.0%
!! TTAAATACACATATAAAATA+GGG - Chr8:3065239-3065258 None:intergenic 10.0%
!! TTGCAAATAATAATATTTAT+TGG - Chr8:3062102-3062121 None:intergenic 10.0%
!!! TTATGGTTTTAAATTTTAAT+TGG + Chr8:3062727-3062746 MsG0880042044.01.T01:intron 10.0%
!! AAAATGAATAAGATTGTAAA+TGG - Chr8:3066280-3066299 None:intergenic 15.0%
!! ATAAGTTAGTATTACTAATT+AGG + Chr8:3065280-3065299 MsG0880042044.01.T01:intron 15.0%
!! ATCATATCATTTATATACTT+TGG + Chr8:3065861-3065880 MsG0880042044.01.T01:intron 15.0%
!! CAAATAATAATATTTATTGG+AGG - Chr8:3062099-3062118 None:intergenic 15.0%
!! TAAAAAACATATCAATAAAC+TGG - Chr8:3062957-3062976 None:intergenic 15.0%
!! TAAGTTAGTATTACTAATTA+GGG + Chr8:3065281-3065300 MsG0880042044.01.T01:intron 15.0%
!! TAATGATTGTTAACTTATAT+AGG + Chr8:3065992-3066011 MsG0880042044.01.T01:intron 15.0%
!! TGATAAACATTATATCAAAA+AGG - Chr8:3067661-3067680 None:intergenic 15.0%
!! TTAGTAATATTTACACAAAA+TGG - Chr8:3065212-3065231 None:intergenic 15.0%
!! TTTCTTAATATTTGTGAATT+TGG - Chr8:3065166-3065185 None:intergenic 15.0%
!!! ATTTTTTTTTTTTTACCTCA+GGG + Chr8:3062919-3062938 MsG0880042044.01.T01:intron 15.0%
!!! TAAACATTGCTTAATTTTTT+CGG + Chr8:3064537-3064556 MsG0880042044.01.T01:intron 15.0%
!!! TAACATATTTCATGTTTTAA+TGG + Chr8:3065675-3065694 MsG0880042044.01.T01:intron 15.0%
!!! TAATGAGTTATTTGTTTTAA+TGG - Chr8:3067496-3067515 None:intergenic 15.0%
!!! TATTCTTATATTCTTTTAAC+AGG + Chr8:3066461-3066480 MsG0880042044.01.T01:intron 15.0%
!!! TTAGTAATACTAACTTATTT+TGG - Chr8:3065278-3065297 None:intergenic 15.0%
!!! TTTACAATCTTATTCATTTT+TGG + Chr8:3066280-3066299 MsG0880042044.01.T01:intron 15.0%
!! AATAATTAATAGCCACATAA+CGG - Chr8:3065008-3065027 None:intergenic 20.0%
!! AATCTAATAAAGAAAAGCTA+AGG - Chr8:3064892-3064911 None:intergenic 20.0%
!! AATTCCAAATTTAGAAATGA+TGG - Chr8:3066774-3066793 None:intergenic 20.0%
!! ATAACACAATTCAAAATACT+AGG + Chr8:3063947-3063966 MsG0880042044.01.T01:intron 20.0%
!! ATTTAGCTGTATATTATTAC+TGG - Chr8:3066623-3066642 None:intergenic 20.0%
!! CCAATAAATAAAATCAAGAA+TGG - Chr8:3062764-3062783 None:intergenic 20.0%
!! GTTCAAATTAAATGCTTTAA+GGG + Chr8:3062989-3063008 MsG0880042044.01.T01:intron 20.0%
!! TAAATGATATGATCAATGAA+CGG - Chr8:3065854-3065873 None:intergenic 20.0%
!! TAACTTATGTGAAATAATGA+TGG - Chr8:3064631-3064650 None:intergenic 20.0%
!! TAAGATTCATTATTCACTTA+TGG + Chr8:3067557-3067576 MsG0880042044.01.T01:three_prime_UTR 20.0%
!! TACTTGAAATAATATCTCAA+CGG + Chr8:3064299-3064318 MsG0880042044.01.T01:intron 20.0%
!! TATTCTCTTAAAGGAAAAAA+AGG + Chr8:3063120-3063139 MsG0880042044.01.T01:intron 20.0%
!! TCAATATGTTATCATTGAAA+TGG + Chr8:3066655-3066674 MsG0880042044.01.T01:intron 20.0%
!! TCACAAATATTAAGAAAAGT+TGG + Chr8:3065169-3065188 MsG0880042044.01.T01:intron 20.0%
!! TCACATAAGTTATTAACAAT+TGG + Chr8:3064639-3064658 MsG0880042044.01.T01:intron 20.0%
!! TCTAATTAAGAAAAGATAAC+AGG - Chr8:3065544-3065563 None:intergenic 20.0%
!! TCTATTTGATAAAACTTACA+TGG + Chr8:3065745-3065764 MsG0880042044.01.T01:intron 20.0%
!! TGTTCAAATTAAATGCTTTA+AGG + Chr8:3062988-3063007 MsG0880042044.01.T01:intron 20.0%
!! TTATTGAGAAAAAAACAGAA+TGG - Chr8:3062074-3062093 None:intergenic 20.0%
!! TTATTTAGTACAAGTAATAG+TGG - Chr8:3062527-3062546 None:intergenic 20.0%
!! TTTGTTTAGGGATTATATTT+AGG + Chr8:3065339-3065358 MsG0880042044.01.T01:intron 20.0%
!!! AACTTGTTCAAAAAATCATT+TGG + Chr8:3066894-3066913 MsG0880042044.01.T01:intron 20.0%
!!! AATATTTAGTTGATACAAAC+AGG - Chr8:3066445-3066464 None:intergenic 20.0%
!!! ATTTCATGTTTTAATGGTTA+AGG + Chr8:3065681-3065700 MsG0880042044.01.T01:intron 20.0%
!!! CAATAATGGAAAAATTACAT+AGG - Chr8:3062379-3062398 None:intergenic 20.0%
!!! CCATTCTTGATTTTATTTAT+TGG + Chr8:3062761-3062780 MsG0880042044.01.T01:intron 20.0%
!!! CTTGAGTAAATTGATTTTTA+TGG + Chr8:3063823-3063842 MsG0880042044.01.T01:intron 20.0%
!!! GATTTTTTTTTTTTTACCTC+AGG + Chr8:3062918-3062937 MsG0880042044.01.T01:intron 20.0%
!!! TGGTGTTTTTTTTTTTTTCA+TGG + Chr8:3062202-3062221 MsG0880042044.01.T01:intron 20.0%
!!! TGGTTTTAAATTTTAATTGG+TGG + Chr8:3062730-3062749 MsG0880042044.01.T01:intron 20.0%
!!! TTCAAATTAAATGCTTTAAG+GGG + Chr8:3062990-3063009 MsG0880042044.01.T01:intron 20.0%
!!! TTTCATGTTTTAATGGTTAA+GGG + Chr8:3065682-3065701 MsG0880042044.01.T01:intron 20.0%
!!! TTTCTTTTCTTACTATGAAT+AGG - Chr8:3064117-3064136 None:intergenic 20.0%
! AAGTCATGAAGAAATTAGAA+AGG + Chr8:3067330-3067349 MsG0880042044.01.T01:CDS 25.0%
! AATATTTGTGAATTTGGTCA+AGG - Chr8:3065160-3065179 None:intergenic 25.0%
! AATGCACTCGTAAAAAATTA+TGG + Chr8:3062710-3062729 MsG0880042044.01.T01:intron 25.0%
! AATTTACCATTACCATTCAA+TGG - Chr8:3067463-3067482 None:intergenic 25.0%
! ACTATACACATACATACAAA+TGG - Chr8:3064049-3064068 None:intergenic 25.0%
! ACTATCAAAGGAGAAATTTA+TGG - Chr8:3065509-3065528 None:intergenic 25.0%
! AGCAAAATCAAATTCTATGA+AGG - Chr8:3067631-3067650 None:intergenic 25.0%
! AGTATATGACTATGTTTAAC+CGG - Chr8:3066160-3066179 None:intergenic 25.0%
! AGTATCCAAAAAACTATCAA+AGG - Chr8:3065521-3065540 None:intergenic 25.0%
! ATAGTGTCTACATACTAATT+TGG - Chr8:3063437-3063456 None:intergenic 25.0%
! ATATTTGTGAATTTGGTCAA+GGG - Chr8:3065159-3065178 None:intergenic 25.0%
! ATCTTCAAAAATCAACGTTA+AGG + Chr8:3063904-3063923 MsG0880042044.01.T01:intron 25.0%
! ATGATAACATATTGACAAGT+AGG - Chr8:3066650-3066669 None:intergenic 25.0%
! CAAACCATCATTTCTAAATT+TGG + Chr8:3066767-3066786 MsG0880042044.01.T01:intron 25.0%
! CAATATTAAACAGACTCATT+AGG - Chr8:3065925-3065944 None:intergenic 25.0%
! CTATTGGCAAATAATAGTAA+TGG + Chr8:3063698-3063717 MsG0880042044.01.T01:intron 25.0%
! GATGAAAATGCATTATTGTT+TGG + Chr8:3064329-3064348 MsG0880042044.01.T01:intron 25.0%
! GATGTTTGTGAAAATTGAAT+TGG + Chr8:3066229-3066248 MsG0880042044.01.T01:intron 25.0%
! GCATTTAACTAGTACATTAA+GGG + Chr8:3063082-3063101 MsG0880042044.01.T01:intron 25.0%
! GCGTTTAAACACAAAAAAAA+AGG - Chr8:3064698-3064717 None:intergenic 25.0%
! TAACAAGGAAAAGAAAGTTA+AGG - Chr8:3062004-3062023 None:intergenic 25.0%
! TAATCCCTAAACAAATTACT+AGG - Chr8:3065334-3065353 None:intergenic 25.0%
! TAATGAATGTGTAGCTTAAT+TGG - Chr8:3064671-3064690 None:intergenic 25.0%
! TAGCTGTATGTAATCATTTA+TGG + Chr8:3064011-3064030 MsG0880042044.01.T01:intron 25.0%
! TATTTGCATTTGCAACAATA+AGG - Chr8:3065595-3065614 None:intergenic 25.0%
! TGTTAATTCAGAAACAAAAG+AGG - Chr8:3063668-3063687 None:intergenic 25.0%
! TTACTAATTAGGGTTATGTT+TGG + Chr8:3065291-3065310 MsG0880042044.01.T01:intron 25.0%
! TTGAATTGAAACATTGTTGT+TGG + Chr8:3062182-3062201 MsG0880042044.01.T01:intron 25.0%
!! AAAAAAGGAAGTTCGATTTT+AGG + Chr8:3063135-3063154 MsG0880042044.01.T01:intron 25.0%
!! AAGCATTGTTTCAACTTAAT+TGG - Chr8:3067057-3067076 None:intergenic 25.0%
!! ATCAGCAATTTTCTTTCAAA+GGG - Chr8:3063267-3063286 None:intergenic 25.0%
!! ATTTTTATGGATATGAAGTC+TGG + Chr8:3063836-3063855 MsG0880042044.01.T01:intron 25.0%
!! CAAATTCAGTGTTTTACAAT+TGG + Chr8:3066330-3066349 MsG0880042044.01.T01:intron 25.0%
!! TAATTTTACAGAGATCGTTT+TGG + Chr8:3063016-3063035 MsG0880042044.01.T01:intron 25.0%
!! TATCAGCAATTTTCTTTCAA+AGG - Chr8:3063268-3063287 None:intergenic 25.0%
!! TATTTCAAGTAAACAGAGAT+TGG - Chr8:3064290-3064309 None:intergenic 25.0%
!! TTACGTACTTTTCCTTTTAT+TGG + Chr8:3064726-3064745 MsG0880042044.01.T01:intron 25.0%
!! TTTAGTGCTTTATGAGTTTT+GGG + Chr8:3064972-3064991 MsG0880042044.01.T01:intron 25.0%
!! TTTCCTTTTATTGGCAAATA+TGG + Chr8:3064735-3064754 MsG0880042044.01.T01:intron 25.0%
!! TTTTAGTGCTTTATGAGTTT+TGG + Chr8:3064971-3064990 MsG0880042044.01.T01:intron 25.0%
!! TTTTTGCGTTATTCTCTTAA+AGG + Chr8:3063111-3063130 MsG0880042044.01.T01:intron 25.0%
!!! ACAACGTTGACTTATAATTA+GGG + Chr8:3066973-3066992 MsG0880042044.01.T01:intron 25.0%
!!! AGCATATGACTTTTTTTCAA+AGG + Chr8:3065362-3065381 MsG0880042044.01.T01:intron 25.0%
!!! AGTTTGTTCAAATTTTGCTA+CGG + Chr8:3062477-3062496 MsG0880042044.01.T01:intron 25.0%
!!! CATGTTTTGAATACTTAAGA+TGG + Chr8:3064934-3064953 MsG0880042044.01.T01:intron 25.0%
!!! GAAATTGATTTTAGTGAGAT+GGG + Chr8:3062224-3062243 MsG0880042044.01.T01:intron 25.0%
!!! GATTTTATTTATTGGCTTTG+TGG + Chr8:3062769-3062788 MsG0880042044.01.T01:intron 25.0%
!!! GCATATGACTTTTTTTCAAA+GGG + Chr8:3065363-3065382 MsG0880042044.01.T01:intron 25.0%
!!! TACAACGTTGACTTATAATT+AGG + Chr8:3066972-3066991 MsG0880042044.01.T01:intron 25.0%
!!! TTCATGTTTTAATGGTTAAG+GGG + Chr8:3065683-3065702 MsG0880042044.01.T01:intron 25.0%
!!! TTCTTTTTTGACGTTAGAAA+AGG + Chr8:3063737-3063756 MsG0880042044.01.T01:intron 25.0%
!!! TTTCATTGTCGTTTAACTTT+TGG + Chr8:3063537-3063556 MsG0880042044.01.T01:intron 25.0%
!!! TTTCTCCTTTGATAGTTTTT+TGG + Chr8:3065513-3065532 MsG0880042044.01.T01:intron 25.0%
AACGTGTATCTATTATAGAG+CGG + Chr8:3066039-3066058 MsG0880042044.01.T01:CDS 30.0%
AAGGAATTCTGTATTACCTT+CGG - Chr8:3067275-3067294 None:intergenic 30.0%
AAGTTCCCAAATATGTATGT+AGG + Chr8:3064256-3064275 MsG0880042044.01.T01:CDS 30.0%
ACAAGTAATAGTGGCTATTA+CGG - Chr8:3062518-3062537 None:intergenic 30.0%
ACTTCACCTACATACATATT+TGG - Chr8:3064265-3064284 None:intergenic 30.0%
AGAAACAAAAGAGGATACAA+GGG - Chr8:3063659-3063678 None:intergenic 30.0%
AGAACACACGTATTTAACAT+GGG + Chr8:3063190-3063209 MsG0880042044.01.T01:intron 30.0%
AGAAGGAACAATTTGAATGA+TGG - Chr8:3063223-3063242 None:intergenic 30.0%
AGATACTTAATGATGAGCTT+TGG - Chr8:3062351-3062370 None:intergenic 30.0%
AGCTTATAATAAGGGACATA+GGG - Chr8:3065136-3065155 None:intergenic 30.0%
AGTCAAATGAAAACTTGATG+AGG + Chr8:3067596-3067615 MsG0880042044.01.T01:three_prime_UTR 30.0%
ATGAAAGCTTACTTCTTGAT+TGG - Chr8:3062321-3062340 None:intergenic 30.0%
ATTGACAACATATGTAATGC+AGG + Chr8:3064153-3064172 MsG0880042044.01.T01:intron 30.0%
CAACCATATTTGCCAATAAA+AGG - Chr8:3064741-3064760 None:intergenic 30.0%
CAATTTCTTTGCATATCAAC+AGG - Chr8:3063492-3063511 None:intergenic 30.0%
CAATTTGTCAAAGAGAAAGT+CGG + Chr8:3063167-3063186 MsG0880042044.01.T01:intron 30.0%
CTCATTCATCTCTATTCTAA+CGG + Chr8:3066121-3066140 MsG0880042044.01.T01:CDS 30.0%
CTGGTAAATCACTGTATATT+CGG + Chr8:3062892-3062911 MsG0880042044.01.T01:intron 30.0%
CTGTTGATATGCAAAGAAAT+TGG + Chr8:3063490-3063509 MsG0880042044.01.T01:intron 30.0%
CTTATGTGAAATAATGATGG+TGG - Chr8:3064628-3064647 None:intergenic 30.0%
CTTCACCTACATACATATTT+GGG - Chr8:3064264-3064283 None:intergenic 30.0%
GGACAATGAAACAAAAAGTA+AGG - Chr8:3064832-3064851 None:intergenic 30.0%
GGCATTTAACTAGTACATTA+AGG + Chr8:3063081-3063100 MsG0880042044.01.T01:intron 30.0%
TAAGAGAAAAAGTTGAAGAC+AGG - Chr8:3067029-3067048 None:intergenic 30.0%
TACATACAAATGGAGTGTAT+TGG - Chr8:3064039-3064058 None:intergenic 30.0%
TGTATTGCTGATATTGTTCA+AGG - Chr8:3063357-3063376 None:intergenic 30.0%
TGTTATCATTGAAATGGAGT+TGG + Chr8:3066661-3066680 MsG0880042044.01.T01:intron 30.0%
TGTTTATGTGTGGAATGATT+AGG + Chr8:3064766-3064785 MsG0880042044.01.T01:intron 30.0%
TTAGAATAGAGATGAATGAG+AGG - Chr8:3066121-3066140 None:intergenic 30.0%
TTCAAATTGTGGTTTAACCA+AGG - Chr8:3066535-3066554 None:intergenic 30.0%
TTGACAACAAACAAGAAGTT+CGG - Chr8:3066876-3066895 None:intergenic 30.0%
TTTCATTTGACTATAGCCAT+AGG - Chr8:3067588-3067607 None:intergenic 30.0%
! AAAAAAGAGAGAGTACAATC+AGG - Chr8:3063591-3063610 None:intergenic 30.0%
! ATTTGCAACAATAAGGTGTT+TGG - Chr8:3065588-3065607 None:intergenic 30.0%
! CAACTGAGAATGTTGAATTT+TGG + Chr8:3067679-3067698 MsG0880042044.01.T01:three_prime_UTR 30.0%
! CAGGAAAAGTATATGTGAAT+GGG + Chr8:3064172-3064191 MsG0880042044.01.T01:intron 30.0%
! CATAAAGCACTAAAAACCTT+GGG - Chr8:3064966-3064985 None:intergenic 30.0%
! GCAAATTGGTGCTTATTAAA+AGG - Chr8:3066948-3066967 None:intergenic 30.0%
! GTTCTGCATTTTATTGTTGA+AGG + Chr8:3062869-3062888 MsG0880042044.01.T01:intron 30.0%
! TCAAGTCTCTTTTTCCTAAA+AGG - Chr8:3063325-3063344 None:intergenic 30.0%
! TCACCAAATCAACATTTTGT+GGG - Chr8:3066091-3066110 None:intergenic 30.0%
! TCATAAAGCACTAAAAACCT+TGG - Chr8:3064967-3064986 None:intergenic 30.0%
! TGTCCTTTTATGCTTTTCTT+CGG + Chr8:3064860-3064879 MsG0880042044.01.T01:intron 30.0%
! TTAAACCACAATTTGAAGCT+CGG + Chr8:3066538-3066557 MsG0880042044.01.T01:CDS 30.0%
! TTTTTCCATTATTGCATCGT+TGG + Chr8:3062385-3062404 MsG0880042044.01.T01:intron 30.0%
!! ATGCACCTAGTAATTTGTTT+AGG + Chr8:3065326-3065345 MsG0880042044.01.T01:intron 30.0%
!! GATCGTTTTGGACATATTTA+AGG + Chr8:3063028-3063047 MsG0880042044.01.T01:intron 30.0%
!! GGAAATTGATTTTAGTGAGA+TGG + Chr8:3062223-3062242 MsG0880042044.01.T01:intron 30.0%
!! TCAAAGGGTGCTTATAATTA+GGG + Chr8:3065378-3065397 MsG0880042044.01.T01:intron 30.0%
!! TCAATAAACTGGCTTGTTTA+AGG - Chr8:3062946-3062965 None:intergenic 30.0%
!! TGCACCTAGTAATTTGTTTA+GGG + Chr8:3065327-3065346 MsG0880042044.01.T01:intron 30.0%
!! TTCAAAGGGTGCTTATAATT+AGG + Chr8:3065377-3065396 MsG0880042044.01.T01:intron 30.0%
!!! CTTTTGGTTTTCTATTTGTG+AGG + Chr8:3063553-3063572 MsG0880042044.01.T01:intron 30.0%
!!! TCATGTTTTAATGGTTAAGG+GGG + Chr8:3065684-3065703 MsG0880042044.01.T01:intron 30.0%
AAAAGGACAATCTTCTCTGA+AGG - Chr8:3067385-3067404 None:intergenic 35.0%
AAGCAGTGAGTAATATTAGC+TGG + Chr8:3067527-3067546 MsG0880042044.01.T01:three_prime_UTR 35.0%
ACATGGTATCTTCACTAACA+CGG + Chr8:3062634-3062653 MsG0880042044.01.T01:intron 35.0%
AGATTATCCTACAAAGGGTT+TGG + Chr8:3067126-3067145 MsG0880042044.01.T01:intron 35.0%
ATACAGCTAGAAGAGAATCA+TGG - Chr8:3064000-3064019 None:intergenic 35.0%
ATCTTCAGAGTAGTAGTCTT+CGG + Chr8:3065043-3065062 MsG0880042044.01.T01:intron 35.0%
ATGGTGCATCACATGTTTAT+GGG + Chr8:3064484-3064503 MsG0880042044.01.T01:CDS 35.0%
CAACTAAGTTTAAGCCTCTA+AGG - Chr8:3064806-3064825 None:intergenic 35.0%
CAGAAACAAAAGAGGATACA+AGG - Chr8:3063660-3063679 None:intergenic 35.0%
CATTGAAATGTAATCTGCAG+AGG + Chr8:3065783-3065802 MsG0880042044.01.T01:intron 35.0%
CCAACAACTCATTACTATAC+AGG - Chr8:3067438-3067457 None:intergenic 35.0%
CCTGTATAGTAATGAGTTGT+TGG + Chr8:3067435-3067454 MsG0880042044.01.T01:three_prime_UTR 35.0%
CTCTCAGATTATCCTACAAA+GGG + Chr8:3067121-3067140 MsG0880042044.01.T01:intron 35.0%
CTGAAGATAGCTGATACAAT+GGG - Chr8:3065031-3065050 None:intergenic 35.0%
CTTAGAGGCTTAAACTTAGT+TGG + Chr8:3064804-3064823 MsG0880042044.01.T01:intron 35.0%
GAACACACGTATTTAACATG+GGG + Chr8:3063191-3063210 MsG0880042044.01.T01:intron 35.0%
GAGAACACACGTATTTAACA+TGG + Chr8:3063189-3063208 MsG0880042044.01.T01:intron 35.0%
GAGCTTATAATAAGGGACAT+AGG - Chr8:3065137-3065156 None:intergenic 35.0%
GCATAAAAGGACAGCATAAA+AGG - Chr8:3064853-3064872 None:intergenic 35.0%
GTAGTGGTAACAATATGTCA+TGG + Chr8:3062791-3062810 MsG0880042044.01.T01:intron 35.0%
GTCAAGGGAGCTTATAATAA+GGG - Chr8:3065144-3065163 None:intergenic 35.0%
GTGCTTATTAAAAGGAACAG+AGG - Chr8:3066940-3066959 None:intergenic 35.0%
GTGGATGACTAATTAGTAGA+AGG - Chr8:3063240-3063259 None:intergenic 35.0%
GTTCTCGAGAAGATTACAAA+AGG + Chr8:3067193-3067212 MsG0880042044.01.T01:CDS 35.0%
TAACGGTACGATCTTTAATC+CGG + Chr8:3066138-3066157 MsG0880042044.01.T01:intron 35.0%
TATGGTGCATCACATGTTTA+TGG + Chr8:3064483-3064502 MsG0880042044.01.T01:CDS 35.0%
TCTGAAGATAGCTGATACAA+TGG - Chr8:3065032-3065051 None:intergenic 35.0%
TGACTTATAATTAGGGACAG+AGG + Chr8:3066980-3066999 MsG0880042044.01.T01:intron 35.0%
TGCTGTGGTAAATGTTATGA+AGG + Chr8:3066491-3066510 MsG0880042044.01.T01:CDS 35.0%
TGTAGCTCAAAGACAACAAT+CGG - Chr8:3064916-3064935 None:intergenic 35.0%
TTAACAATGCTAGCTGCTAT+TGG + Chr8:3063682-3063701 MsG0880042044.01.T01:intron 35.0%
TTCACCAGAATCCATAACAA+AGG + Chr8:3067301-3067320 MsG0880042044.01.T01:CDS 35.0%
TTCACTTATGGTTTCACCTA+TGG + Chr8:3067569-3067588 MsG0880042044.01.T01:three_prime_UTR 35.0%
TTCATAACATTTACCACAGC+AGG - Chr8:3066492-3066511 None:intergenic 35.0%
TTGACAACACTACATCTACA+TGG + Chr8:3062617-3062636 MsG0880042044.01.T01:intron 35.0%
! AAGCCGAAGAAAAGCATAAA+AGG - Chr8:3064866-3064885 None:intergenic 35.0%
! AAGTTTTCCAAACCCTTTGT+AGG - Chr8:3067136-3067155 None:intergenic 35.0%
! ACAAAAGGAGTAGAGAGTTT+TGG + Chr8:3067208-3067227 MsG0880042044.01.T01:CDS 35.0%
! ACTTTCTGAAGACTTTCTTC+TGG + Chr8:3065084-3065103 MsG0880042044.01.T01:intron 35.0%
! ATATTTAAGGCCTAATGCAG+AGG + Chr8:3063041-3063060 MsG0880042044.01.T01:intron 35.0%
! ATTAATAGCCACATAACGGA+TGG - Chr8:3065004-3065023 None:intergenic 35.0%
! CAATTTTCTTTCAAAGGGAG+TGG - Chr8:3063262-3063281 None:intergenic 35.0%
! CACGGTGAAGCAAATTATTT+TGG + Chr8:3062652-3062671 MsG0880042044.01.T01:intron 35.0%
! GAGATTGATTTCTGCAATTC+AGG + Chr8:3067171-3067190 MsG0880042044.01.T01:intron 35.0%
! GAGTTTAAGGTTTCGTAACA+AGG - Chr8:3062019-3062038 None:intergenic 35.0%
! GCAGGAAAAGTATATGTGAA+TGG + Chr8:3064171-3064190 MsG0880042044.01.T01:intron 35.0%
! GGGAAGAGAATATTTAAAGC+CGG + Chr8:3064192-3064211 MsG0880042044.01.T01:CDS 35.0%
! GTCACCAAATCAACATTTTG+TGG - Chr8:3066092-3066111 None:intergenic 35.0%
! TCTCCCACAAAATGTTGATT+TGG + Chr8:3066085-3066104 MsG0880042044.01.T01:CDS 35.0%
! TGCATTTTATTGTTGAAGGC+TGG + Chr8:3062873-3062892 MsG0880042044.01.T01:intron 35.0%
! TTCAGAGAAGATTGTCCTTT+TGG + Chr8:3067384-3067403 MsG0880042044.01.T01:three_prime_UTR 35.0%
! TTTTTATATCGACACAGAGC+TGG + Chr8:3064354-3064373 MsG0880042044.01.T01:intron 35.0%
! TTTTTGTGCATTCGCCTTTT+AGG + Chr8:3063308-3063327 MsG0880042044.01.T01:intron 35.0%
!! ATGTGAAATAATGATGGTGG+AGG - Chr8:3064625-3064644 None:intergenic 35.0%
!! ATTTATTGGCTTTGTGGTAG+TGG + Chr8:3062775-3062794 MsG0880042044.01.T01:intron 35.0%
!! TATTCTATTTCTGTGCAAGC+AGG + Chr8:3066695-3066714 MsG0880042044.01.T01:intron 35.0%
!! TGGACTAGTCCTGTTTAAAT+TGG - Chr8:3066260-3066279 None:intergenic 35.0%
!!! CTTAATTTTTTCGGCTACTC+TGG + Chr8:3064546-3064565 MsG0880042044.01.T01:intron 35.0%
!!! TGCTTTTGGTGTTTTAAGCA+AGG + Chr8:3067098-3067117 MsG0880042044.01.T01:intron 35.0%
AAAGCAGAAACCCTCATACA+AGG - Chr8:3067084-3067103 None:intergenic 40.0%
AACCAGAGAACGTTAATGAG+AGG + Chr8:3066383-3066402 MsG0880042044.01.T01:intron 40.0%
AAGGAGGGACAAAGGTTATT+TGG + Chr8:3064587-3064606 MsG0880042044.01.T01:intron 40.0%
AATATAACCAAAGCGAGCTC+AGG - Chr8:3063460-3063479 None:intergenic 40.0%
AATGCTTCACACCTTGTATG+AGG + Chr8:3067070-3067089 MsG0880042044.01.T01:intron 40.0%
ACAACAGATTTGTCAGACAC+AGG - Chr8:3064222-3064241 None:intergenic 40.0%
ACGTTAAGGCTATAAGCTTG+AGG + Chr8:3063918-3063937 MsG0880042044.01.T01:intron 40.0%
ACTGACTGCTTACTTCAGTA+TGG + Chr8:3064465-3064484 MsG0880042044.01.T01:CDS 40.0%
AGAGATGAATGAGAGGTCTA+AGG - Chr8:3066114-3066133 None:intergenic 40.0%
AGGAGGGACAAAGGTTATTT+GGG + Chr8:3064588-3064607 MsG0880042044.01.T01:intron 40.0%
ATCTGTTAAAGGAGGGACAA+AGG + Chr8:3064579-3064598 MsG0880042044.01.T01:intron 40.0%
ATGCTTCACACCTTGTATGA+GGG + Chr8:3067071-3067090 MsG0880042044.01.T01:intron 40.0%
CAAAATCCATGACTGGATGA+TGG - Chr8:3063386-3063405 None:intergenic 40.0%
CAGTGTAATTCCTCTGCATT+AGG - Chr8:3063054-3063073 None:intergenic 40.0%
CTAGTCCTGTTTAAATTGGC+AGG - Chr8:3066256-3066275 None:intergenic 40.0%
CTTAAGATGGATGTTTCCCA+AGG + Chr8:3064947-3064966 MsG0880042044.01.T01:intron 40.0%
GAATAGGCATAAGAAGAGTC+TGG - Chr8:3064101-3064120 None:intergenic 40.0%
GACTTTCAGCACCTTTGTTA+TGG - Chr8:3067315-3067334 None:intergenic 40.0%
GATGTGCAAGCATCTGTTAA+AGG + Chr8:3064568-3064587 MsG0880042044.01.T01:intron 40.0%
GCTCTCAGATTATCCTACAA+AGG + Chr8:3067120-3067139 MsG0880042044.01.T01:intron 40.0%
GGTCAAATACCAGTTAGAAG+AGG + Chr8:3062252-3062271 MsG0880042044.01.T01:CDS 40.0%
GGTCAAGGGAGCTTATAATA+AGG - Chr8:3065145-3065164 None:intergenic 40.0%
GTAAAGTGGCTCTTGATTCT+GGG + Chr8:3064424-3064443 MsG0880042044.01.T01:CDS 40.0%
GTATTGTTAATCCTGCGAGT+AGG + Chr8:3065414-3065433 MsG0880042044.01.T01:intron 40.0%
GTCGAATCAGAATGACATGA+TGG + Chr8:3062407-3062426 MsG0880042044.01.T01:intron 40.0%
GTTCTCTGGTTGCTTAAGAA+GGG - Chr8:3066374-3066393 None:intergenic 40.0%
TACCTTGCAAAATCCATGAC+TGG - Chr8:3063393-3063412 None:intergenic 40.0%
TCATGTGTTATGCACAGATC+AGG - Chr8:3066207-3066226 None:intergenic 40.0%
TGCAAGCATCTGTTAAAGGA+GGG + Chr8:3064572-3064591 MsG0880042044.01.T01:intron 40.0%
TGCAGTAGCATAGCTTCTAA+AGG - Chr8:3062280-3062299 None:intergenic 40.0%
TGCTTATAATTAGGGACGGA+GGG + Chr8:3065386-3065405 MsG0880042044.01.T01:intron 40.0%
TGGTGCATCACATGTTTATG+GGG + Chr8:3064485-3064504 MsG0880042044.01.T01:CDS 40.0%
TGTGTCTGACAAATCTGTTG+TGG + Chr8:3064221-3064240 MsG0880042044.01.T01:CDS 40.0%
TGTTGATGTTGCTGGTAAAG+TGG + Chr8:3064410-3064429 MsG0880042044.01.T01:CDS 40.0%
TTACGAAACCTTAAACTCCC+AGG + Chr8:3062021-3062040 MsG0880042044.01.T01:CDS 40.0%
TTCCTCTCATTAACGTTCTC+TGG - Chr8:3066388-3066407 None:intergenic 40.0%
TTCGACCAACGATGCAATAA+TGG - Chr8:3062393-3062412 None:intergenic 40.0%
TTGGACCTGCCAATTTAAAC+AGG + Chr8:3066248-3066267 MsG0880042044.01.T01:intron 40.0%
! AGCACCTTTGTTATGGATTC+TGG - Chr8:3067308-3067327 None:intergenic 40.0%
! AGGGTGCTTATAATTAGGGA+CGG + Chr8:3065382-3065401 MsG0880042044.01.T01:intron 40.0%
! AGTAGTCTTCGGCTTGATTT+GGG + Chr8:3065054-3065073 MsG0880042044.01.T01:intron 40.0%
! ATCCAGTCATGGATTTTGCA+AGG + Chr8:3063388-3063407 MsG0880042044.01.T01:CDS 40.0%
! GACAAAGGTTATTTGGGGTA+GGG + Chr8:3064594-3064613 MsG0880042044.01.T01:intron 40.0%
! TAGTAGTCTTCGGCTTGATT+TGG + Chr8:3065053-3065072 MsG0880042044.01.T01:intron 40.0%
! TGTATGAGGGTTTCTGCTTT+TGG + Chr8:3067084-3067103 MsG0880042044.01.T01:intron 40.0%
! TGTCATGGTAGTAGTGCTTT+TGG + Chr8:3062806-3062825 MsG0880042044.01.T01:intron 40.0%
! TTTTCTTTCAAAGGGAGTGG+TGG - Chr8:3063259-3063278 None:intergenic 40.0%
!! ATAGACCATATCGATTCAGC+AGG - Chr8:3065730-3065749 None:intergenic 40.0%
!! ATTTTAGTGAGATGGGTGAG+TGG + Chr8:3062231-3062250 MsG0880042044.01.T01:intron 40.0%
!! CATGTTTATGGGGTTGATGT+AGG + Chr8:3064495-3064514 MsG0880042044.01.T01:CDS 40.0%
!! GATGGTTTGTTTCCAGCAAA+CGG - Chr8:3066756-3066775 None:intergenic 40.0%
!! GGTTGCTTGTTGTTTATGTG+TGG + Chr8:3064756-3064775 MsG0880042044.01.T01:intron 40.0%
!! TATGGGGTTGATGTAGGTTA+TGG + Chr8:3064501-3064520 MsG0880042044.01.T01:CDS 40.0%
!! TTGGTGCCATTGAATGGTAA+TGG + Chr8:3067454-3067473 MsG0880042044.01.T01:three_prime_UTR 40.0%
!!! AGTTTTGGTTTCTGCAGCAA+AGG + Chr8:3067223-3067242 MsG0880042044.01.T01:CDS 40.0%
AACCTGTTCCTGGGAGTTTA+AGG - Chr8:3062032-3062051 None:intergenic 45.0%
AACCTTAAACTCCCAGGAAC+AGG + Chr8:3062027-3062046 MsG0880042044.01.T01:CDS 45.0%
AAGCTCGGAGATCTCAAGTA+AGG + Chr8:3066553-3066572 MsG0880042044.01.T01:intron 45.0%
ACACAGAGCTGGACATAAGT+TGG + Chr8:3064365-3064384 MsG0880042044.01.T01:intron 45.0%
ACCTACAGGAGCTAGAGTAT+TGG + Chr8:3063797-3063816 MsG0880042044.01.T01:intron 45.0%
AGAGATCATGATCTAGCCTG+TGG + Chr8:3063762-3063781 MsG0880042044.01.T01:intron 45.0%
AGATGCTGCATTAGTGACCT+TGG + Chr8:3066515-3066534 MsG0880042044.01.T01:CDS 45.0%
AGGCATAAGAAGAGTCTGGA+AGG - Chr8:3064097-3064116 None:intergenic 45.0%
ATCATTTCACCTCCGTTTGC+TGG + Chr8:3066741-3066760 MsG0880042044.01.T01:intron 45.0%
ATTCCATTGTCTGTGCAGGT+AGG + Chr8:3066791-3066810 MsG0880042044.01.T01:intron 45.0%
ATTGTCTGTGCAGGTAGGAA+AGG + Chr8:3066796-3066815 MsG0880042044.01.T01:intron 45.0%
CAACGTTGTAGAGCGCAAAT+TGG - Chr8:3066962-3066981 None:intergenic 45.0%
CACCTGCTACATCTTCCAAA+AGG - Chr8:3067402-3067421 None:intergenic 45.0%
CGCTTTGTAAACCTCGTAAC+TGG - Chr8:3061975-3061994 None:intergenic 45.0%
CGTTCTCTGGTTGCTTAAGA+AGG - Chr8:3066375-3066394 None:intergenic 45.0%
GACTTCCTGCTGAATCGATA+TGG + Chr8:3065722-3065741 MsG0880042044.01.T01:intron 45.0%
GAGGAATTACACTGTGTAGC+AGG + Chr8:3063060-3063079 MsG0880042044.01.T01:intron 45.0%
GATCTCCGAGCTTCAAATTG+TGG - Chr8:3066546-3066565 None:intergenic 45.0%
GGAGGGACAAAGGTTATTTG+GGG + Chr8:3064589-3064608 MsG0880042044.01.T01:intron 45.0%
GGATTCTGGTGAAGTGAACA+AGG - Chr8:3067294-3067313 None:intergenic 45.0%
GGTAAAGTGGCTCTTGATTC+TGG + Chr8:3064423-3064442 MsG0880042044.01.T01:CDS 45.0%
GTAAGAGTTCAGCTACGCAA+TGG + Chr8:3062571-3062590 MsG0880042044.01.T01:intron 45.0%
GTAGATCCATCATCCAGTCA+TGG + Chr8:3063377-3063396 MsG0880042044.01.T01:CDS 45.0%
GTGCAAGCATCTGTTAAAGG+AGG + Chr8:3064571-3064590 MsG0880042044.01.T01:intron 45.0%
GTGCTTATAATTAGGGACGG+AGG + Chr8:3065385-3065404 MsG0880042044.01.T01:intron 45.0%
TGGAATTCCATTGTCTGTGC+AGG + Chr8:3066787-3066806 MsG0880042044.01.T01:intron 45.0%
TGGATTGAGTCTCCTCTCAA+AGG + Chr8:3067247-3067266 MsG0880042044.01.T01:CDS 45.0%
TTGGTTTCTGCAGCAAAGGT+TGG + Chr8:3067227-3067246 MsG0880042044.01.T01:CDS 45.0%
TTGTCTGTGCAGGTAGGAAA+GGG + Chr8:3066797-3066816 MsG0880042044.01.T01:intron 45.0%
TTTCCTACCTGCACAGACAA+TGG - Chr8:3066797-3066816 None:intergenic 45.0%
TTTGTCAGACACAGGTGTAC+CGG - Chr8:3064214-3064233 None:intergenic 45.0%
! AGAGCTGGACATAAGTTGGA+AGG + Chr8:3064369-3064388 MsG0880042044.01.T01:intron 45.0%
! CCTACAGGAGCTAGAGTATT+GGG + Chr8:3063798-3063817 MsG0880042044.01.T01:intron 45.0%
! CTCTAGCTCCTGTAGGTAAA+AGG - Chr8:3063794-3063813 None:intergenic 45.0%
! GGACAAAGGTTATTTGGGGT+AGG + Chr8:3064593-3064612 MsG0880042044.01.T01:intron 45.0%
! GGTTGATGTAGGTTATGGAC+AGG + Chr8:3064506-3064525 MsG0880042044.01.T01:CDS 45.0%
! TGGTAGTAGTGCTTTTGGTG+AGG + Chr8:3062811-3062830 MsG0880042044.01.T01:intron 45.0%
!! AATAGCCACATAACGGATGG+CGG - Chr8:3065001-3065020 None:intergenic 45.0%
!! CTAAAGGCACCTCTTCTAAC+TGG - Chr8:3062264-3062283 None:intergenic 45.0%
!! CTACAGGAGCTAGAGTATTG+GGG + Chr8:3063799-3063818 MsG0880042044.01.T01:intron 45.0%
!! GAGTTGTTGGTGCCATTGAA+TGG + Chr8:3067448-3067467 MsG0880042044.01.T01:three_prime_UTR 45.0%
!! GTCCTTTTGGAAGATGTAGC+AGG + Chr8:3067397-3067416 MsG0880042044.01.T01:three_prime_UTR 45.0%
AAAAACCACCCACCTCCTGA+TGG - Chr8:3066847-3066866 None:intergenic 50.0%
ACACTATCCTGAGCTCGCTT+TGG + Chr8:3063450-3063469 MsG0880042044.01.T01:intron 50.0%
AGAGAGACAGAACCTGTTCC+TGG - Chr8:3062042-3062061 None:intergenic 50.0%
AGGTAAAAGGATGCCTCCAC+AGG - Chr8:3063781-3063800 None:intergenic 50.0%
ATCAACACCGAGCTGTTCGA+TGG - Chr8:3064397-3064416 None:intergenic 50.0%
CACGTGCAGTTATGCCTTAG+AGG + Chr8:3064789-3064808 MsG0880042044.01.T01:intron 50.0%
CTCTGGTTGCTTAAGAAGGG+TGG - Chr8:3066371-3066390 None:intergenic 50.0%
CTTGATTCTGGGCTGTCAAC+TGG + Chr8:3064435-3064454 MsG0880042044.01.T01:CDS 50.0%
GAAAGATCCTGCTGTCCATC+AGG + Chr8:3066829-3066848 MsG0880042044.01.T01:intron 50.0%
GAGAGACAGAACCTGTTCCT+GGG - Chr8:3062041-3062060 None:intergenic 50.0%
GATCATGATCTAGCCTGTGG+AGG + Chr8:3063765-3063784 MsG0880042044.01.T01:intron 50.0%
GTGAAGCAGAACCAGTTACG+AGG + Chr8:3061961-3061980 MsG0880042044.01.T01:CDS 50.0%
GTTAATCCTGCGAGTAGGAC+TGG + Chr8:3065419-3065438 MsG0880042044.01.T01:intron 50.0%
TTAACAGGTCATGCCTGCTG+TGG + Chr8:3066476-3066495 MsG0880042044.01.T01:intron 50.0%
TTACCTTCGGCACCTTTGAG+AGG - Chr8:3067262-3067281 None:intergenic 50.0%
! CCCAATACTCTAGCTCCTGT+AGG - Chr8:3063801-3063820 None:intergenic 50.0%
! GGTTTGTTTCCAGCAAACGG+AGG - Chr8:3066753-3066772 None:intergenic 50.0%
!! ATAGCCACATAACGGATGGC+GGG - Chr8:3065000-3065019 None:intergenic 50.0%
!! TGGCTTGTTTAAGGACCCTG+AGG - Chr8:3062937-3062956 None:intergenic 50.0%
!!! GGAGGCATCCTTTTACCTAC+AGG + Chr8:3063783-3063802 MsG0880042044.01.T01:intron 50.0%
AGACAACCAGTCCTACTCGC+AGG - Chr8:3065428-3065447 None:intergenic 55.0%
AGATCCTGCTGTCCATCAGG+AGG + Chr8:3066832-3066851 MsG0880042044.01.T01:intron 55.0%
CTGTGCAGGTAGGAAAGGGA+GGG + Chr8:3066801-3066820 MsG0880042044.01.T01:intron 55.0%
GATTCTGGGCTGTCAACTGG+AGG + Chr8:3064438-3064457 MsG0880042044.01.T01:CDS 55.0%
TCTGTGCAGGTAGGAAAGGG+AGG + Chr8:3066800-3066819 MsG0880042044.01.T01:intron 55.0%
!! CAGCTCGGTGTTGATGTTGC+TGG + Chr8:3064402-3064421 MsG0880042044.01.T01:CDS 55.0%
!! GAAGGTGCCATCGAACAGCT+CGG + Chr8:3064387-3064406 MsG0880042044.01.T01:CDS 55.0%
!! TCTCCTCTCAAAGGTGCCGA+AGG + Chr8:3067256-3067275 MsG0880042044.01.T01:CDS 55.0%
CCTGCTGTCCATCAGGAGGT+GGG + Chr8:3066836-3066855 MsG0880042044.01.T01:intron 60.0%
TCCTGCTGTCCATCAGGAGG+TGG + Chr8:3066835-3066854 MsG0880042044.01.T01:intron 60.0%
GCTGTCCATCAGGAGGTGGG+TGG + Chr8:3066839-3066858 MsG0880042044.01.T01:intron 65.0%
GGCACCCGCCATCCGTTATG+TGG + Chr8:3064993-3065012 MsG0880042044.01.T01:intron 65.0%
! CCCACCTCCTGATGGACAGC+AGG - Chr8:3066839-3066858 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3061946 3067737 3061946 ID=MsG0880042044.01;Name=MsG0880042044.01
Chr8 mRNA 3061946 3067737 3061946 ID=MsG0880042044.01.T01;Parent=MsG0880042044.01;Name=MsG0880042044.01.T01;_AED=0.39;_eAED=0.42;_QI=0|0.14|0.25|1|1|1|8|377|305
Chr8 exon 3061946 3062048 3061946 ID=MsG0880042044.01.T01:exon:1474;Parent=MsG0880042044.01.T01
Chr8 exon 3062238 3062328 3062238 ID=MsG0880042044.01.T01:exon:1475;Parent=MsG0880042044.01.T01
Chr8 exon 3063330 3063409 3063330 ID=MsG0880042044.01.T01:exon:1476;Parent=MsG0880042044.01.T01
Chr8 exon 3064175 3064277 3064175 ID=MsG0880042044.01.T01:exon:1477;Parent=MsG0880042044.01.T01
Chr8 exon 3064371 3064527 3064371 ID=MsG0880042044.01.T01:exon:1478;Parent=MsG0880042044.01.T01
Chr8 exon 3066014 3066142 3066014 ID=MsG0880042044.01.T01:exon:1479;Parent=MsG0880042044.01.T01
Chr8 exon 3066483 3066569 3066483 ID=MsG0880042044.01.T01:exon:1480;Parent=MsG0880042044.01.T01
Chr8 exon 3067193 3067737 3067193 ID=MsG0880042044.01.T01:exon:1481;Parent=MsG0880042044.01.T01
Chr8 CDS 3061946 3062048 3061946 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 CDS 3062238 3062328 3062238 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 CDS 3063330 3063409 3063330 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 CDS 3064175 3064277 3064175 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 CDS 3064371 3064527 3064371 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 CDS 3066014 3066142 3066014 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 CDS 3066483 3066569 3066483 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 CDS 3067193 3067360 3067193 ID=MsG0880042044.01.T01:cds;Parent=MsG0880042044.01.T01
Chr8 three_prime_UTR 3067361 3067737 3067361 ID=MsG0880042044.01.T01:three_prime_utr;Parent=MsG0880042044.01.T01
Gene Sequence

>MsG0880042044.01.T01

ATGGCGTTACAGTTTGTGAAGCAGAACCAGTTACGAGGTTTACAAAGCGAGACAACCTTAACTTTCTTTTCCTTGTTACGAAACCTTAAACTCCCAGGAACAGTGAGATGGGTGAGTGGTCAAATACCAGTTAGAAGAGGTGCCTTTAGAAGCTATGCTACTGCAAAATCAGAAAAGATTATACCAATCAAGAAGAAAAAGAGACTTGATGAAGTATGCCTTGAACAATATCAGCAATACAGTAGATCCATCATCCAGTCATGGATTTTGCAAGGAAAAGTATATGTGAATGGGAAGAGAATATTTAAAGCCGGTACACCTGTGTCTGACAAATCTGTTGTGGAGATAAAAGCTGAAGTTCCCAAATATGTATGTAGAGCTGGACATAAGTTGGAAGGTGCCATCGAACAGCTCGGTGTTGATGTTGCTGGTAAAGTGGCTCTTGATTCTGGGCTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGTGCATCACATGTTTATGGGGTTGATGTAGGTTATGGACAGGTAGCAGACAAAATTCAAAGAGATGAACGTGTATCTATTATAGAGCGGACAAATTTAAGATATCTCAAAGATCTCCCACAAAATGTTGATTTGGTGACCTTAGACCTCTCATTCATCTCTATTCTAACGGTCATGCCTGCTGTGGTAAATGTTATGAAGGAAGATGCTGCATTAGTGACCTTGGTTAAACCACAATTTGAAGCTCGGAGATCTCAAGTTCTCGAGAAGATTACAAAAGGAGTAGAGAGTTTTGGTTTCTGCAGCAAAGGTTGGATTGAGTCTCCTCTCAAAGGTGCCGAAGGTAATACAGAATTCCTTGTTCACTTCACCAGAATCCATAACAAAGGTGCTGAAAGTCATGAAGAAATTAGAAAGGAAATTTAG

Protein sequence

>MsG0880042044.01.T01

MALQFVKQNQLRGLQSETTLTFFSLLRNLKLPGTVRWVSGQIPVRRGAFRSYATAKSEKIIPIKKKKRLDEVCLEQYQQYSRSIIQSWILQGKVYVNGKRIFKAGTPVSDKSVVEIKAEVPKYVCRAGHKLEGAIEQLGVDVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVADKIQRDERVSIIERTNLRYLKDLPQNVDLVTLDLSFISILTVMPAVVNVMKEDAALVTLVKPQFEARRSQVLEKITKGVESFGFCSKGWIESPLKGAEGNTEFLVHFTRIHNKGAESHEEIRKEI*