AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022992.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022992.01.T01 MTR_8g080910 89.538 325 12 3 1 304 1 324 0.0 588
MsG0480022992.01.T01 MTR_3g084790 65.361 332 64 7 22 304 39 368 5.81e-127 391
MsG0480022992.01.T01 MTR_4g087040 49.635 274 107 5 58 305 196 464 1.36e-74 249
MsG0480022992.01.T01 MTR_4g123730 52.137 234 87 3 91 304 191 419 2.54e-72 243
MsG0480022992.01.T01 MTR_3g055940 42.342 333 150 8 2 305 22 341 2.85e-71 238
MsG0480022992.01.T01 MTR_5g094310 43.023 344 150 11 2 305 6 343 1.07e-70 237
MsG0480022992.01.T01 MTR_2g087840 46.520 273 115 6 58 304 91 358 5.21e-70 236
MsG0480022992.01.T01 MTR_1g484960 40.672 268 124 6 58 304 6 259 1.70e-45 165
MsG0480022992.01.T01 MTR_1g059730 34.828 290 151 8 52 304 9 297 2.87e-39 147
MsG0480022992.01.T01 MTR_1g017540 35.273 275 139 5 57 304 5 267 1.22e-38 145
MsG0480022992.01.T01 MTR_7g105030 36.820 239 125 4 91 304 56 293 6.61e-38 143
MsG0480022992.01.T01 MTR_7g105030 36.820 239 125 4 91 304 56 293 6.61e-38 143
MsG0480022992.01.T01 MTR_1g067630 33.866 313 160 8 28 304 33 334 1.42e-37 142
MsG0480022992.01.T01 MTR_4g094882 35.354 297 134 8 58 304 15 303 4.81e-37 140
MsG0480022992.01.T01 MTR_2g096010 32.986 288 154 6 52 304 45 328 7.15e-37 140
MsG0480022992.01.T01 MTR_3g100270 36.179 246 110 5 90 304 51 280 1.85e-36 139
MsG0480022992.01.T01 MTR_8g072430 35.636 275 130 9 58 304 878 1133 5.43e-36 137
MsG0480022992.01.T01 MTR_5g066320 35.433 254 118 6 84 304 49 289 2.45e-35 135
MsG0480022992.01.T01 MTR_2g010760 35.870 276 134 7 58 303 438 700 3.51e-35 135
MsG0480022992.01.T01 MTR_7g109130 36.630 273 134 8 58 304 102 361 3.78e-35 134
MsG0480022992.01.T01 MTR_7g109130 36.630 273 134 8 58 304 181 440 4.32e-35 135
MsG0480022992.01.T01 MTR_7g109130 36.630 273 134 8 58 304 403 662 5.77e-35 134
MsG0480022992.01.T01 MTR_4g071210 37.838 259 141 9 58 304 92 342 5.87e-35 134
MsG0480022992.01.T01 MTR_4g071210 37.838 259 141 9 58 304 92 342 5.92e-35 134
MsG0480022992.01.T01 MTR_7g112420 36.101 277 133 9 58 304 274 536 1.22e-34 133
MsG0480022992.01.T01 MTR_5g021650 37.719 228 136 4 79 304 57 280 1.25e-34 133
MsG0480022992.01.T01 MTR_3g117330 36.861 274 152 10 43 304 88 352 1.32e-34 133
MsG0480022992.01.T01 MTR_5g025100 36.957 230 111 5 93 304 934 1147 1.39e-34 133
MsG0480022992.01.T01 MTR_2g082570 37.945 253 111 7 84 303 437 676 1.54e-34 133
MsG0480022992.01.T01 MTR_1g087880 35.294 272 139 6 58 304 399 658 2.15e-34 133
MsG0480022992.01.T01 MTR_5g096570 36.000 275 136 9 58 304 437 699 2.37e-34 133
MsG0480022992.01.T01 MTR_1g083770 37.918 269 139 9 58 304 413 675 3.82e-34 132
MsG0480022992.01.T01 MTR_4g092140 33.798 287 136 7 58 303 320 593 1.24e-33 130
MsG0480022992.01.T01 MTR_4g112350 38.627 233 115 5 86 303 171 390 1.26e-33 130
MsG0480022992.01.T01 MTR_4g081390 35.714 252 117 6 84 303 472 710 1.77e-33 130
MsG0480022992.01.T01 MTR_4g081390 35.714 252 117 6 84 303 470 708 2.43e-33 129
MsG0480022992.01.T01 MTR_7g112420 35.036 274 134 8 58 304 404 660 3.83e-33 129
MsG0480022992.01.T01 MTR_8g076190 38.158 228 135 4 79 304 56 279 4.49e-33 129
MsG0480022992.01.T01 MTR_8g076190 38.158 228 135 4 79 304 56 279 5.28e-33 129
MsG0480022992.01.T01 MTR_5g011500 30.792 341 173 10 11 304 13 337 5.49e-33 129
MsG0480022992.01.T01 MTR_8g076190 38.158 228 135 4 79 304 56 279 6.12e-33 129
MsG0480022992.01.T01 MTR_7g109130 35.507 276 136 8 58 304 403 665 6.49e-33 128
MsG0480022992.01.T01 MTR_3g060900 35.052 291 157 8 34 304 417 695 1.85e-32 127
MsG0480022992.01.T01 MTR_2g055910 32.852 277 142 7 57 303 70 332 3.43e-32 126
MsG0480022992.01.T01 MTR_1g018940 34.091 264 123 6 84 304 40 295 9.41e-32 125
MsG0480022992.01.T01 MTR_2g069950 37.946 224 123 7 91 304 385 602 1.69e-31 124
MsG0480022992.01.T01 MTR_3g102170 32.653 294 142 8 58 304 11 295 2.13e-31 124
MsG0480022992.01.T01 MTR_2g082570 37.190 242 106 7 84 292 437 665 2.98e-31 123
MsG0480022992.01.T01 MTR_8g098230 37.069 232 116 6 91 304 529 748 3.34e-31 124
MsG0480022992.01.T01 MTR_4g071900 33.969 262 152 5 57 303 26 281 7.28e-31 122
MsG0480022992.01.T01 MTR_5g031470 36.364 231 114 5 91 304 444 658 8.26e-31 122
MsG0480022992.01.T01 MTR_3g113110 38.710 217 125 5 91 304 67 278 1.83e-30 121
MsG0480022992.01.T01 MTR_7g093720 38.009 221 124 7 91 304 114 328 2.15e-30 121
MsG0480022992.01.T01 MTR_1g082920 36.742 264 145 8 58 304 150 408 2.44e-30 121
MsG0480022992.01.T01 MTR_5g049620 36.364 231 114 5 91 304 419 633 4.36e-30 120
MsG0480022992.01.T01 MTR_5g049820 35.931 231 115 5 91 304 419 633 6.90e-30 119
MsG0480022992.01.T01 MTR_7g075060 30.960 323 173 9 25 304 16 331 7.28e-30 119
MsG0480022992.01.T01 MTR_8g098230 35.833 240 116 6 91 304 529 756 1.08e-29 119
MsG0480022992.01.T01 MTR_7g091290 36.444 225 125 5 91 304 436 653 1.21e-29 119
MsG0480022992.01.T01 MTR_4g124650 30.650 323 192 7 7 304 82 397 1.24e-29 119
MsG0480022992.01.T01 MTR_7g113520 36.842 228 123 7 89 304 170 388 5.92e-29 117
MsG0480022992.01.T01 MTR_8g104200 36.170 282 127 9 58 304 518 781 8.08e-28 114
MsG0480022992.01.T01 MTR_1g081800 33.333 240 121 5 89 304 126 350 5.29e-27 111
MsG0480022992.01.T01 MTR_6g082470 33.846 260 154 6 57 303 32 286 8.33e-27 110
MsG0480022992.01.T01 MTR_6g086735 31.343 268 151 8 58 303 118 374 8.42e-26 107
MsG0480022992.01.T01 MTR_6g086735 31.343 268 151 8 58 303 118 374 8.64e-26 107
MsG0480022992.01.T01 MTR_2g101990 30.195 308 179 11 18 303 151 444 4.49e-25 105
MsG0480022992.01.T01 MTR_7g061020 27.974 311 168 9 23 303 5 289 2.47e-23 100
MsG0480022992.01.T01 MTR_2g436650 31.441 229 144 4 86 303 163 389 1.07e-22 98.6
MsG0480022992.01.T01 MTR_2g436650 31.760 233 138 6 86 303 243 469 1.36e-22 98.6
MsG0480022992.01.T01 MTR_4g119980 29.562 274 159 8 58 303 208 475 3.72e-22 97.1
MsG0480022992.01.T01 MTR_7g091290 34.579 214 103 6 91 304 433 609 4.12e-22 97.1
MsG0480022992.01.T01 MTR_8g471180 31.399 293 150 11 37 304 131 397 5.51e-18 85.1
MsG0480022992.01.T01 MTR_3g113630 26.724 232 132 8 92 304 141 353 1.61e-17 83.6
MsG0480022992.01.T01 MTR_3g113630 26.724 232 132 8 92 304 141 353 1.71e-17 83.6
MsG0480022992.01.T01 MTR_6g084490 28.819 288 134 10 58 304 480 737 2.03e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022992.01.T01 AT3G23670 60.756 344 83 7 10 304 23 363 1.05e-119 367
MsG0480022992.01.T01 AT3G23670 60.756 344 83 7 10 304 23 363 1.78e-117 367
MsG0480022992.01.T01 AT4G14150 58.726 361 87 10 3 304 1 358 4.07e-117 366
MsG0480022992.01.T01 AT3G19050 47.445 274 113 5 58 305 196 464 1.57e-72 243
MsG0480022992.01.T01 AT3G17360 46.897 290 120 7 42 304 156 438 4.16e-72 242
MsG0480022992.01.T01 AT3G17360 46.897 290 120 7 42 304 156 438 4.45e-72 242
MsG0480022992.01.T01 AT3G17360 46.897 290 120 7 42 304 156 438 4.53e-72 242
MsG0480022992.01.T01 AT3G44050 46.520 273 115 6 58 304 96 363 3.57e-66 224
MsG0480022992.01.T01 AT3G20150 38.983 354 141 9 10 305 33 369 1.53e-64 219
MsG0480022992.01.T01 AT3G20150 38.983 354 141 9 10 305 33 369 1.79e-64 219
MsG0480022992.01.T01 AT3G10180 42.912 261 129 7 58 304 6 260 2.50e-44 162
MsG0480022992.01.T01 AT3G10180 42.912 261 129 7 58 304 6 260 2.61e-44 162
MsG0480022992.01.T01 AT3G63480 37.991 229 118 5 91 304 48 267 1.65e-42 152
MsG0480022992.01.T01 AT3G63480 37.768 233 117 7 91 304 48 271 3.43e-41 149
MsG0480022992.01.T01 AT1G59540 36.842 266 139 6 57 304 5 259 5.43e-39 146
MsG0480022992.01.T01 AT2G37420 33.968 315 163 9 30 304 18 327 6.31e-39 146
MsG0480022992.01.T01 AT2G37420 33.968 315 163 9 30 304 18 327 6.31e-39 146
MsG0480022992.01.T01 AT2G28620 34.722 288 149 7 52 304 46 329 8.65e-39 145
MsG0480022992.01.T01 AT2G28620 34.722 288 149 7 52 304 46 329 9.80e-39 145
MsG0480022992.01.T01 AT2G28620 34.722 288 149 7 52 304 46 329 9.80e-39 145
MsG0480022992.01.T01 AT2G36200 36.820 239 125 4 91 304 59 296 7.48e-38 143
MsG0480022992.01.T01 AT2G36200 36.820 239 125 4 91 304 59 296 1.02e-37 142
MsG0480022992.01.T01 AT3G45850 34.828 290 146 9 52 304 51 334 1.23e-37 142
MsG0480022992.01.T01 AT3G45850 34.828 290 146 9 52 304 51 334 1.23e-37 142
MsG0480022992.01.T01 AT5G60930 38.174 241 100 5 105 304 60 292 1.56e-37 142
MsG0480022992.01.T01 AT5G60930 38.174 241 100 5 105 304 60 292 1.60e-37 142
MsG0480022992.01.T01 AT5G60930 38.174 241 100 5 105 304 60 292 1.77e-37 142
MsG0480022992.01.T01 AT4G39050 35.254 295 153 9 30 304 75 351 5.06e-37 140
MsG0480022992.01.T01 AT5G54670 38.174 241 109 5 91 304 383 610 3.76e-36 137
MsG0480022992.01.T01 AT5G54670 38.174 241 109 5 91 304 443 670 3.86e-36 137
MsG0480022992.01.T01 AT5G54670 38.174 241 109 5 91 304 443 670 3.86e-36 137
MsG0480022992.01.T01 AT4G21270 37.500 248 111 5 87 303 474 708 5.89e-36 137
MsG0480022992.01.T01 AT4G27180 36.842 285 129 8 58 304 390 661 6.06e-36 137
MsG0480022992.01.T01 AT4G27180 36.842 285 129 8 58 304 390 661 6.06e-36 137
MsG0480022992.01.T01 AT4G05190 35.069 288 132 7 58 303 431 705 7.46e-36 137
MsG0480022992.01.T01 AT4G05190 35.069 288 132 7 58 303 418 692 7.60e-36 137
MsG0480022992.01.T01 AT5G65930 36.957 230 111 5 93 304 932 1145 8.09e-36 137
MsG0480022992.01.T01 AT5G65930 36.957 230 111 5 93 304 933 1146 8.49e-36 137
MsG0480022992.01.T01 AT5G65930 36.957 230 111 5 93 304 939 1152 8.50e-36 137
MsG0480022992.01.T01 AT5G06670 35.154 293 150 9 28 304 53 321 2.85e-35 135
MsG0480022992.01.T01 AT5G06670 35.154 293 150 9 28 304 53 321 2.85e-35 135
MsG0480022992.01.T01 AT5G06670 35.154 293 150 9 28 304 53 321 2.85e-35 135
MsG0480022992.01.T01 AT5G06670 35.154 293 150 9 28 304 53 321 3.83e-35 135
MsG0480022992.01.T01 AT2G21380 37.037 270 150 9 47 304 96 357 6.18e-35 134
MsG0480022992.01.T01 AT2G21380 37.037 270 150 9 47 304 96 357 6.18e-35 134
MsG0480022992.01.T01 AT5G06670 35.154 293 150 9 28 304 53 321 8.43e-35 134
MsG0480022992.01.T01 AT5G06670 35.154 293 150 9 28 304 53 321 8.43e-35 134
MsG0480022992.01.T01 AT5G47820 33.003 303 144 9 52 304 9 302 2.00e-34 133
MsG0480022992.01.T01 AT5G47820 33.003 303 144 9 52 304 9 302 2.00e-34 133
MsG0480022992.01.T01 AT2G22610 38.636 220 124 4 91 304 462 676 2.29e-34 133
MsG0480022992.01.T01 AT2G22610 38.636 220 124 4 91 304 462 676 2.33e-34 133
MsG0480022992.01.T01 AT2G22610 38.636 220 124 4 91 304 463 677 2.60e-34 132
MsG0480022992.01.T01 AT1G63640 37.118 229 113 5 91 304 518 730 6.32e-34 131
MsG0480022992.01.T01 AT1G63640 38.496 226 121 6 91 304 508 727 1.31e-33 130
MsG0480022992.01.T01 AT1G63640 38.496 226 121 6 91 304 518 737 1.33e-33 130
MsG0480022992.01.T01 AT1G63640 38.496 226 121 6 91 304 518 737 1.44e-33 130
MsG0480022992.01.T01 AT1G63640 38.496 226 121 6 91 304 518 737 1.44e-33 130
MsG0480022992.01.T01 AT3G10310 39.394 231 112 9 91 304 407 626 1.59e-33 130
MsG0480022992.01.T01 AT3G10310 39.394 231 112 9 91 304 407 626 1.64e-33 130
MsG0480022992.01.T01 AT2G47500 33.824 272 143 6 58 304 402 661 2.97e-33 129
MsG0480022992.01.T01 AT2G47500 33.824 272 143 6 58 304 402 661 3.01e-33 129
MsG0480022992.01.T01 AT1G09170 36.000 275 134 8 58 304 437 697 3.17e-33 129
MsG0480022992.01.T01 AT1G21730 38.249 217 129 4 91 304 116 330 4.24e-33 129
MsG0480022992.01.T01 AT1G09170 36.000 275 134 8 58 304 437 697 5.06e-33 129
MsG0480022992.01.T01 AT1G09170 36.000 275 134 8 58 304 437 697 5.09e-33 129
MsG0480022992.01.T01 AT1G09170 36.000 275 134 8 58 304 437 697 5.88e-33 129
MsG0480022992.01.T01 AT1G09170 36.000 275 134 8 58 304 437 697 5.88e-33 129
MsG0480022992.01.T01 AT1G09170 36.000 275 134 8 58 304 437 697 5.95e-33 128
MsG0480022992.01.T01 AT1G09170 36.000 275 134 8 58 304 437 697 5.95e-33 128
MsG0480022992.01.T01 AT3G50240 35.409 257 115 7 91 304 64 312 6.42e-33 129
MsG0480022992.01.T01 AT3G50240 35.409 257 115 7 91 304 64 312 6.47e-33 129
MsG0480022992.01.T01 AT3G44730 35.842 279 139 9 54 304 376 642 7.62e-33 128
MsG0480022992.01.T01 AT3G44730 35.842 279 139 9 54 304 376 642 7.62e-33 128
MsG0480022992.01.T01 AT3G44730 35.842 279 139 9 54 304 421 687 7.92e-33 128
MsG0480022992.01.T01 AT3G44730 35.842 279 139 9 54 304 421 687 7.92e-33 128
MsG0480022992.01.T01 AT3G50240 35.409 257 115 7 91 304 64 312 8.33e-33 128
MsG0480022992.01.T01 AT1G73860 34.783 276 139 10 58 304 512 775 9.15e-33 128
MsG0480022992.01.T01 AT3G51150 39.545 220 119 7 91 304 66 277 1.44e-32 127
MsG0480022992.01.T01 AT3G51150 39.545 220 119 7 91 304 66 277 1.46e-32 127
MsG0480022992.01.T01 AT3G51150 39.545 220 119 7 91 304 66 277 1.46e-32 127
MsG0480022992.01.T01 AT3G51150 39.545 220 119 7 91 304 66 277 1.46e-32 127
MsG0480022992.01.T01 AT1G18410 37.069 232 116 7 91 304 535 754 1.67e-32 127
MsG0480022992.01.T01 AT1G18410 37.069 232 116 7 91 304 535 754 1.67e-32 127
MsG0480022992.01.T01 AT1G73860 34.783 276 139 10 58 304 429 692 1.85e-32 127
MsG0480022992.01.T01 AT1G18410 37.069 232 116 7 91 304 678 897 2.49e-32 127
MsG0480022992.01.T01 AT5G06670 34.106 302 150 10 28 304 53 330 3.29e-32 126
MsG0480022992.01.T01 AT5G06670 34.106 302 150 10 28 304 53 330 3.29e-32 126
MsG0480022992.01.T01 AT5G27000 37.229 231 116 5 91 304 440 658 3.33e-32 126
MsG0480022992.01.T01 AT5G66310 40.455 220 117 7 91 304 67 278 4.19e-32 126
MsG0480022992.01.T01 AT5G66310 40.455 220 117 7 91 304 67 278 4.19e-32 126
MsG0480022992.01.T01 AT5G66310 40.455 220 117 7 91 304 67 278 4.19e-32 126
MsG0480022992.01.T01 AT3G12020 35.271 258 151 7 58 304 72 324 6.55e-32 125
MsG0480022992.01.T01 AT3G12020 35.271 258 151 7 58 304 72 324 6.55e-32 125
MsG0480022992.01.T01 AT3G12020 35.271 258 151 7 58 304 72 324 7.73e-32 125
MsG0480022992.01.T01 AT3G12020 35.271 258 151 7 58 304 72 324 7.73e-32 125
MsG0480022992.01.T01 AT4G38950 35.249 261 152 6 57 304 15 271 1.59e-31 124
MsG0480022992.01.T01 AT4G38950 35.249 261 152 6 57 304 15 271 1.59e-31 124
MsG0480022992.01.T01 AT4G38950 35.249 261 152 6 57 304 15 271 1.59e-31 124
MsG0480022992.01.T01 AT4G38950 35.249 261 152 6 57 304 15 271 1.59e-31 124
MsG0480022992.01.T01 AT4G38950 35.249 261 152 6 57 304 15 271 1.59e-31 124
MsG0480022992.01.T01 AT1G18410 36.681 229 113 6 91 304 525 736 1.89e-31 124
MsG0480022992.01.T01 AT5G41310 35.371 229 106 5 91 304 468 669 2.64e-31 124
MsG0480022992.01.T01 AT3G54870 34.568 243 124 7 87 304 146 378 2.80e-31 124
MsG0480022992.01.T01 AT3G54870 34.568 243 124 7 87 304 146 378 2.91e-31 124
MsG0480022992.01.T01 AT1G18410 36.681 229 113 6 91 304 678 889 2.97e-31 124
MsG0480022992.01.T01 AT2G21300 33.696 276 168 6 41 304 10 282 3.13e-31 124
MsG0480022992.01.T01 AT2G21300 33.696 276 168 6 41 304 10 282 3.13e-31 124
MsG0480022992.01.T01 AT2G21300 33.696 276 168 6 41 304 10 282 3.13e-31 124
MsG0480022992.01.T01 AT2G21300 33.696 276 168 6 41 304 10 282 3.13e-31 124
MsG0480022992.01.T01 AT2G21300 33.696 276 168 6 41 304 10 282 3.13e-31 124
MsG0480022992.01.T01 AT3G54870 35.102 245 120 8 87 304 146 378 3.82e-31 123
MsG0480022992.01.T01 AT5G42490 37.850 214 130 3 91 304 56 266 1.27e-30 122
MsG0480022992.01.T01 AT5G42490 37.850 214 130 3 91 304 56 266 1.30e-30 122
MsG0480022992.01.T01 AT1G18550 37.719 228 113 6 91 303 204 417 1.88e-30 121
MsG0480022992.01.T01 AT1G01950 30.293 307 167 8 38 304 40 339 3.98e-30 120
MsG0480022992.01.T01 AT1G72250 35.018 277 134 9 58 304 503 763 5.23e-30 120
MsG0480022992.01.T01 AT1G01950 30.293 307 167 8 38 304 40 339 5.32e-30 120
MsG0480022992.01.T01 AT1G72250 35.018 277 134 9 58 304 514 774 5.39e-30 120
MsG0480022992.01.T01 AT1G72250 35.018 277 134 9 58 304 494 754 5.47e-30 120
MsG0480022992.01.T01 AT1G01950 30.293 307 167 8 38 304 40 339 5.53e-30 120
MsG0480022992.01.T01 AT1G72250 35.018 277 134 9 58 304 515 775 5.87e-30 120
MsG0480022992.01.T01 AT5G27550 36.771 223 126 6 91 304 177 393 1.41e-29 119
MsG0480022992.01.T01 AT5G27550 36.771 223 126 6 91 304 177 393 1.41e-29 119
MsG0480022992.01.T01 AT1G55550 35.319 235 115 5 91 304 130 348 1.45e-29 119
MsG0480022992.01.T01 AT4G24170 37.788 217 128 5 91 304 50 262 1.81e-29 119
MsG0480022992.01.T01 AT4G24170 37.788 217 128 5 91 304 50 262 1.81e-29 119
MsG0480022992.01.T01 AT1G12430 30.986 284 152 7 58 304 73 349 1.25e-28 116
MsG0480022992.01.T01 AT5G27950 34.298 242 120 5 87 304 115 341 1.32e-28 115
MsG0480022992.01.T01 AT1G12430 30.986 284 152 7 58 304 73 349 1.36e-28 116
MsG0480022992.01.T01 AT1G09170 34.884 258 124 8 58 304 437 661 1.21e-27 113
MsG0480022992.01.T01 AT3G49650 39.683 189 104 5 121 304 95 278 8.48e-26 107
MsG0480022992.01.T01 AT1G18370 32.443 262 155 7 57 303 33 287 1.78e-25 107
MsG0480022992.01.T01 AT1G59540 47.328 131 68 1 174 304 38 167 1.96e-25 106
MsG0480022992.01.T01 AT3G43210 36.574 216 127 3 91 303 74 282 2.92e-24 103
MsG0480022992.01.T01 AT3G43210 36.574 216 127 3 91 303 74 282 2.92e-24 103
MsG0480022992.01.T01 AT3G43210 36.574 216 127 3 91 303 74 282 2.92e-24 103
MsG0480022992.01.T01 AT3G43210 36.574 216 127 3 91 303 74 282 2.92e-24 103
MsG0480022992.01.T01 AT3G43210 36.574 216 127 3 91 303 74 282 2.92e-24 103
MsG0480022992.01.T01 AT5G02370 29.392 296 155 8 38 303 7 278 4.71e-24 102
MsG0480022992.01.T01 AT3G50240 35.185 216 90 6 131 304 3 210 2.55e-23 100
MsG0480022992.01.T01 AT3G16630 30.147 272 159 8 58 303 196 462 4.54e-23 99.8
MsG0480022992.01.T01 AT3G16630 30.147 272 159 8 58 303 196 462 4.54e-23 99.8
MsG0480022992.01.T01 AT3G16060 29.104 268 157 8 58 303 172 428 2.53e-22 97.8
MsG0480022992.01.T01 AT1G01950 33.171 205 103 5 127 304 1 198 1.81e-18 86.3
MsG0480022992.01.T01 AT5G65460 29.252 294 155 12 37 304 123 389 1.50e-15 77.8
MsG0480022992.01.T01 AT5G65460 29.252 294 155 12 37 304 123 389 1.55e-15 77.8
MsG0480022992.01.T01 AT5G65460 29.252 294 155 12 37 304 123 389 1.60e-15 77.8
MsG0480022992.01.T01 AT5G65460 29.252 294 155 12 37 304 123 389 1.78e-15 77.4
MsG0480022992.01.T01 AT3G51150 44.643 112 53 4 198 304 17 124 2.72e-15 77.0
MsG0480022992.01.T01 AT5G65460 29.592 294 161 13 37 304 123 396 3.12e-15 76.6
MsG0480022992.01.T01 AT5G27950 33.526 173 88 3 156 304 6 175 1.92e-14 73.9
MsG0480022992.01.T01 AT5G10470 28.832 274 143 10 58 304 145 393 4.34e-14 73.2
MsG0480022992.01.T01 AT5G10470 28.832 274 143 10 58 304 145 393 4.54e-14 73.2

Find 58 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGCTTATGCGTTGATTT+AGG 0.183501 4:+79491359 None:intergenic
AATTGATACCCACTTCATTT+AGG 0.269765 4:+79490623 None:intergenic
TGTGCTTATGCGTTGATTTA+GGG 0.298827 4:+79491360 None:intergenic
ATCAATCTTGTTGATTTAGC+TGG 0.306265 4:-79488429 MsG0480022992.01.T01:CDS
TTATGGTGAGAGGGAGGCTT+AGG 0.307436 4:+79491314 None:intergenic
GATTTAGGGTTTGAATTTCT+TGG 0.322901 4:+79491374 None:intergenic
AGAGAAAGTAGAGTTTGAAA+TGG 0.354988 4:+79491481 None:intergenic
CACACTACCTCCTCCGATTC+CGG 0.363080 4:-79491263 MsG0480022992.01.T01:CDS
GTTGATTGACAAAGAATTGC+TGG 0.378423 4:+79491075 None:intergenic
ATTAGAGAAGATGTTAAATC+TGG 0.380869 4:-79490230 MsG0480022992.01.T01:CDS
TATGGTGAGAGGGAGGCTTA+GGG 0.386979 4:+79491315 None:intergenic
TTCTTTGTCAATCAACGGTC+AGG 0.400841 4:-79491068 MsG0480022992.01.T01:CDS
ATGGTGAGAGGGAGGCTTAG+GGG 0.406085 4:+79491316 None:intergenic
CTAGTAGAGAATTGTTTGGC+TGG 0.411568 4:-79490883 MsG0480022992.01.T01:CDS
GCTTGCGTTTGAGAGGGTTA+TGG 0.440022 4:+79491297 None:intergenic
GTGGGGTCCTCCCAATGCTT+TGG 0.442648 4:-79490716 MsG0480022992.01.T01:CDS
AATAGATCACTTTCACAACT+TGG 0.452068 4:-79488345 MsG0480022992.01.T01:CDS
AACCACCTTGACGCCGGAAT+CGG 0.453208 4:+79491250 None:intergenic
GGATTGTTAAACAGAACAAT+AGG 0.477436 4:-79489110 MsG0480022992.01.T01:CDS
GACGGGAATCTGAACGGAAA+TGG 0.478685 4:+79491441 None:intergenic
TCAATCTTGTTGATTTAGCT+GGG 0.483692 4:-79488428 MsG0480022992.01.T01:CDS
GGGTCCTCCCAATGCTTTGG+CGG 0.489995 4:-79490713 MsG0480022992.01.T01:CDS
GCCTCTAGTAGAGAATTGTT+TGG 0.492372 4:-79490887 MsG0480022992.01.T01:CDS
TGGTGAGAGGGAGGCTTAGG+GGG 0.502186 4:+79491317 None:intergenic
CGCTCACATTGATGCTACTC+AGG 0.504941 4:-79491026 MsG0480022992.01.T01:intron
AGAGGGTTATGGTGAGAGGG+AGG 0.507922 4:+79491308 None:intergenic
TAGTAGAGAATTGTTTGGCT+GGG 0.512758 4:-79490882 MsG0480022992.01.T01:CDS
TTTGAGAGGGTTATGGTGAG+AGG 0.513271 4:+79491304 None:intergenic
TCCGAATAAAAGAAACCTAC+AGG 0.513767 4:-79490335 MsG0480022992.01.T01:intron
TTGAGAGGGTTATGGTGAGA+GGG 0.531566 4:+79491305 None:intergenic
ATAGATCACTTTCACAACTT+GGG 0.531796 4:-79488344 MsG0480022992.01.T01:CDS
CTCCTCCGATTCCGGCGTCA+AGG 0.534301 4:-79491255 MsG0480022992.01.T01:CDS
AGCAATTCTTTGTCAATCAA+CGG 0.537005 4:-79491073 MsG0480022992.01.T01:CDS
TTTGAATTTCTTGGTACAGT+CGG 0.543649 4:+79491383 None:intergenic
GGGAATCTGAACGGAAATGG+TGG 0.552376 4:+79491444 None:intergenic
GGATACCGTCTGAAGGAAGC+TGG 0.555731 4:-79488375 MsG0480022992.01.T01:CDS
TCATCGAGCTTGCGTTTGAG+AGG 0.565712 4:+79491290 None:intergenic
TGTTGCCAGCTTCCTTCAGA+CGG 0.566449 4:+79488370 None:intergenic
CACCTTGACGCCGGAATCGG+AGG 0.570107 4:+79491253 None:intergenic
CATCGAGCTTGCGTTTGAGA+GGG 0.579039 4:+79491291 None:intergenic
CTTGACGCCGGAATCGGAGG+AGG 0.588019 4:+79491256 None:intergenic
GTGGGAAGACCTACACTATG+TGG 0.588788 4:-79490735 MsG0480022992.01.T01:CDS
GCCAAACAATTCTCTACTAG+AGG 0.595772 4:+79490886 None:intergenic
AATGTGAGCGATGGAATCAA+AGG 0.596797 4:+79491039 None:intergenic
TTTATTCGGATCTAACAGAT+CGG 0.597215 4:+79490348 None:intergenic
AGTAGCATCAATGTGAGCGA+TGG 0.601308 4:+79491030 None:intergenic
TGGGAAGACCTACACTATGT+GGG 0.607786 4:-79490734 MsG0480022992.01.T01:CDS
TGCAGCAGGATACCGTCTGA+AGG 0.608836 4:-79488382 MsG0480022992.01.T01:CDS
CTCCGATTCCGGCGTCAAGG+TGG 0.609569 4:-79491252 MsG0480022992.01.T01:intron
TCGACCGCCAAAGCATTGGG+AGG 0.635581 4:+79490709 None:intergenic
TGTTGTTGAATCTCGATGCA+AGG 0.644585 4:-79489036 MsG0480022992.01.T01:intron
GGGAGGACCCCACATAGTGT+AGG 0.651236 4:+79490726 None:intergenic
GGAGCTTTCAGAATTTACAC+TGG 0.657975 4:+79489082 None:intergenic
TTTCAATACAGACTGGAAGT+GGG 0.659284 4:-79490753 MsG0480022992.01.T01:intron
AATTCATCAATTGATCAACA+AGG 0.669780 4:-79490685 MsG0480022992.01.T01:CDS
GGGAAGACCTACACTATGTG+GGG 0.672779 4:-79490733 MsG0480022992.01.T01:CDS
TCATCAATTGATCAACAAGG+AGG 0.703598 4:-79490682 MsG0480022992.01.T01:CDS
CTACGTCGAGAATCTTACAG+AGG 0.721953 4:-79490204 MsG0480022992.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTATATATATTTTTT+AGG - Chr4:79488676-79488695 MsG0480022992.01.T01:intron 0.0%
!! AAGGATAAAGTAATAAATAA+AGG - Chr4:79491095-79491114 MsG0480022992.01.T01:CDS 15.0%
!! ACAAAAATATATCAATTAAC+TGG + Chr4:79490577-79490596 None:intergenic 15.0%
!! ACAATAGTTAAATTGTATTA+TGG - Chr4:79490876-79490895 MsG0480022992.01.T01:CDS 15.0%
!! AGGATAAAGTAATAAATAAA+GGG - Chr4:79491096-79491115 MsG0480022992.01.T01:CDS 15.0%
!! ATTCAGTTAAAAAATTGATT+TGG - Chr4:79490430-79490449 MsG0480022992.01.T01:intron 15.0%
!! CAATAGTTAAATTGTATTAT+GGG - Chr4:79490877-79490896 MsG0480022992.01.T01:CDS 15.0%
!!! GAAAATATTTTCTAAAAAAC+TGG + Chr4:79490648-79490667 None:intergenic 15.0%
!!! TTTTATTTGATCAATCATAT+TGG - Chr4:79490207-79490226 MsG0480022992.01.T01:CDS 15.0%
!! AAATGTTCCTAAAACTATAA+AGG + Chr4:79490265-79490284 None:intergenic 20.0%
!! AATATCCTTCATTAATGATA+TGG - Chr4:79491047-79491066 MsG0480022992.01.T01:CDS 20.0%
!! TAACAAAAACAAAATGATGA+AGG + Chr4:79489031-79489050 None:intergenic 20.0%
!!! ATATTTTTTAGGTTATTGTG+AGG - Chr4:79488687-79488706 MsG0480022992.01.T01:intron 20.0%
!!! ATCTATATATAGTTTTTAGG+TGG - Chr4:79490170-79490189 MsG0480022992.01.T01:CDS 20.0%
!!! GAATTTGTCATCTTTAAAAT+TGG - Chr4:79490300-79490319 MsG0480022992.01.T01:intron 20.0%
!!! GTGATCTATATATAGTTTTT+AGG - Chr4:79490167-79490186 MsG0480022992.01.T01:CDS 20.0%
!!! TATAGTTTTAGGAACATTTA+AGG - Chr4:79490266-79490285 MsG0480022992.01.T01:intron 20.0%
!!! TTTCTAAAAAACTGGTTAAT+CGG + Chr4:79490640-79490659 None:intergenic 20.0%
! AATTCATCAATTGATCAACA+AGG - Chr4:79489155-79489174 MsG0480022992.01.T01:intron 25.0%
! ACTCTTCAAGAAATTTAACA+AGG + Chr4:79489902-79489921 None:intergenic 25.0%
! AGAACAGAAATTAAAGGAAT+TGG - Chr4:79491070-79491089 MsG0480022992.01.T01:CDS 25.0%
! AGTTAAATTGTATTATGGGT+CGG - Chr4:79490881-79490900 MsG0480022992.01.T01:CDS 25.0%
! ATAAATATTTGACAATCTCC+AGG + Chr4:79490851-79490870 None:intergenic 25.0%
! ATATGGAGAACAGAAATTAA+AGG - Chr4:79491064-79491083 MsG0480022992.01.T01:CDS 25.0%
! ATTAGAGAAGATGTTAAATC+TGG - Chr4:79489610-79489629 MsG0480022992.01.T01:intron 25.0%
! ATTGCTAGAATGACATAATT+TGG + Chr4:79490961-79490980 None:intergenic 25.0%
! CTCTTCAAGAAATTTAACAA+GGG + Chr4:79489901-79489920 None:intergenic 25.0%
! GAAATTAAAGGAATTGGAAA+AGG - Chr4:79491076-79491095 MsG0480022992.01.T01:CDS 25.0%
! GATTAATTGATATAACAGCA+AGG + Chr4:79489285-79489304 None:intergenic 25.0%
! GTTAAAAATTTCGGTAATTG+TGG + Chr4:79488645-79488664 None:intergenic 25.0%
! TAGAATGACATAATTTGGAA+GGG + Chr4:79490956-79490975 None:intergenic 25.0%
! TAGATAATTGTATACGCATA+AGG - Chr4:79490034-79490053 MsG0480022992.01.T01:intron 25.0%
! TATTCTACTTGTGTTTATAC+TGG - Chr4:79489561-79489580 MsG0480022992.01.T01:intron 25.0%
! TGTTAGAATGACACATAATT+TGG - Chr4:79491190-79491209 MsG0480022992.01.T01:intron 25.0%
!! TAATAAATAAAGGGCATAGT+AGG - Chr4:79491105-79491124 MsG0480022992.01.T01:CDS 25.0%
!! TTAGCGTTGTTTCAATAATA+AGG - Chr4:79489956-79489975 MsG0480022992.01.T01:intron 25.0%
!! TTCTAAAAAACTGGTTAATC+GGG + Chr4:79490639-79490658 None:intergenic 25.0%
!!! AATAGTTCTGTTTTTGCTTA+TGG - Chr4:79488984-79489003 MsG0480022992.01.T01:intron 25.0%
!!! ATAGTTCTGTTTTTGCTTAT+GGG - Chr4:79488985-79489004 MsG0480022992.01.T01:intron 25.0%
!!! CTTGATATTTTTGAGCTTAT+TGG - Chr4:79488927-79488946 MsG0480022992.01.T01:intron 25.0%
!!! TTTGTTTTTTCAATACAGAC+TGG - Chr4:79489080-79489099 MsG0480022992.01.T01:CDS 25.0%
!!! TTTTAACTGAATCTGCTTAA+TGG + Chr4:79490422-79490441 None:intergenic 25.0%
AAGTAAAAACAGTGTGTGAA+CGG + Chr4:79490783-79490802 None:intergenic 30.0%
AATAGATCACTTTCACAACT+TGG - Chr4:79491495-79491514 MsG0480022992.01.T01:five_prime_UTR 30.0%
AATTGATACCCACTTCATTT+AGG + Chr4:79489220-79489239 None:intergenic 30.0%
AGAGAAAGTAGAGTTTGAAA+TGG + Chr4:79488362-79488381 None:intergenic 30.0%
AGCAACATGCTTTCATTATT+TGG + Chr4:79490065-79490084 None:intergenic 30.0%
AGCAATTCTTTGTCAATCAA+CGG - Chr4:79488767-79488786 MsG0480022992.01.T01:intron 30.0%
ATAGATCACTTTCACAACTT+GGG - Chr4:79491496-79491515 MsG0480022992.01.T01:five_prime_UTR 30.0%
ATATTTATCTGGTGTATGGT+TGG - Chr4:79489808-79489827 MsG0480022992.01.T01:intron 30.0%
ATTCCTTGTTGAATCATTTG+AGG - Chr4:79489249-79489268 MsG0480022992.01.T01:intron 30.0%
CTAGAATGACATAATTTGGA+AGG + Chr4:79490957-79490976 None:intergenic 30.0%
CTGAATATTTATCTGGTGTA+TGG - Chr4:79489804-79489823 MsG0480022992.01.T01:intron 30.0%
GAATGACACATAATTTGGAA+CGG - Chr4:79491195-79491214 MsG0480022992.01.T01:intron 30.0%
GATAGATGTGTAAACACATA+AGG - Chr4:79490097-79490116 MsG0480022992.01.T01:intron 30.0%
GGATTGTTAAACAGAACAAT+AGG - Chr4:79490730-79490749 MsG0480022992.01.T01:CDS 30.0%
GTTAAATTGTATTATGGGTC+GGG - Chr4:79490882-79490901 MsG0480022992.01.T01:CDS 30.0%
GTTCTCCATATCATTAATGA+AGG + Chr4:79491055-79491074 None:intergenic 30.0%
TCAGAACGACAAAAATTAAC+AGG - Chr4:79491435-79491454 MsG0480022992.01.T01:five_prime_UTR 30.0%
TGAAATGCTCAATTGCTTAA+AGG - Chr4:79490466-79490485 MsG0480022992.01.T01:intron 30.0%
TTTATTCGGATCTAACAGAT+CGG + Chr4:79489495-79489514 None:intergenic 30.0%
TTTGAATTTCTTGGTACAGT+CGG + Chr4:79488460-79488479 None:intergenic 30.0%
! ACCTGTAGGTTTCTTTTATT+CGG + Chr4:79489509-79489528 None:intergenic 30.0%
! CGACAAACCTTTATAGTTTT+AGG - Chr4:79490255-79490274 MsG0480022992.01.T01:intron 30.0%
! GATTTAGGGTTTGAATTTCT+TGG + Chr4:79488469-79488488 None:intergenic 30.0%
! GCTGGAAATTTTCTTAACAA+TGG + Chr4:79488750-79488769 None:intergenic 30.0%
! TGTAAATCAGCTTTTGATGA+AGG - Chr4:79489681-79489700 MsG0480022992.01.T01:intron 30.0%
!! ATCAATCTTGTTGATTTAGC+TGG - Chr4:79491411-79491430 MsG0480022992.01.T01:exon 30.0%
!! TCAATCTTGTTGATTTAGCT+GGG - Chr4:79491412-79491431 MsG0480022992.01.T01:exon 30.0%
AATTTCGGTAATTGTGGATG+AGG + Chr4:79488639-79488658 None:intergenic 35.0%
ACAAGACAAAGCAAATGTTG+AGG + Chr4:79491257-79491276 None:intergenic 35.0%
ACACAAGTAGAATATGCACA+AGG + Chr4:79489555-79489574 None:intergenic 35.0%
ACTATAAAGGTTTGTCGCAA+TGG + Chr4:79490252-79490271 None:intergenic 35.0%
ACTTGTGTTTATACTGGAAC+TGG - Chr4:79489567-79489586 MsG0480022992.01.T01:intron 35.0%
AGACCTCAAATGATTCAACA+AGG + Chr4:79489255-79489274 None:intergenic 35.0%
AGCATTTCATACGAATTCCT+AGG + Chr4:79489932-79489951 None:intergenic 35.0%
AGTAAAAACAGTGTGTGAAC+GGG + Chr4:79490782-79490801 None:intergenic 35.0%
ATAATGAATGCACATCACTG+TGG - Chr4:79490129-79490148 MsG0480022992.01.T01:intron 35.0%
ATCGGGATTTAGAAGAGAAA+TGG + Chr4:79490622-79490641 None:intergenic 35.0%
ATGTCACTGTTCATTTCTTG+AGG - Chr4:79489361-79489380 MsG0480022992.01.T01:intron 35.0%
CACAAGTAGAATATGCACAA+GGG + Chr4:79489554-79489573 None:intergenic 35.0%
CTCAACGCTGAATATTTATC+TGG - Chr4:79489797-79489816 MsG0480022992.01.T01:intron 35.0%
CTTGAAGAGTAATTATCCCT+AGG - Chr4:79489912-79489931 MsG0480022992.01.T01:intron 35.0%
GCATTTCATACGAATTCCTA+GGG + Chr4:79489931-79489950 None:intergenic 35.0%
GTTAAAGATCGCTAACTGTT+AGG + Chr4:79490925-79490944 None:intergenic 35.0%
GTTGATTGACAAAGAATTGC+TGG + Chr4:79488768-79488787 None:intergenic 35.0%
TAATGAATGCACATCACTGT+GGG - Chr4:79490130-79490149 MsG0480022992.01.T01:intron 35.0%
TAGTAGAGAATTGTTTGGCT+GGG - Chr4:79488958-79488977 MsG0480022992.01.T01:intron 35.0%
TAGTTACTAGCATGAAAGCA+AGG + Chr4:79490532-79490551 None:intergenic 35.0%
TATTTACCTTTCACTGTGCA+GGG - Chr4:79490709-79490728 MsG0480022992.01.T01:CDS 35.0%
TCATCAATTGATCAACAAGG+AGG - Chr4:79489158-79489177 MsG0480022992.01.T01:intron 35.0%
TCCGAATAAAAGAAACCTAC+AGG - Chr4:79489505-79489524 MsG0480022992.01.T01:intron 35.0%
TCGGGATTTAGAAGAGAAAT+GGG + Chr4:79490621-79490640 None:intergenic 35.0%
TTATTTACCTTTCACTGTGC+AGG - Chr4:79490708-79490727 MsG0480022992.01.T01:CDS 35.0%
TTTCAATACAGACTGGAAGT+GGG - Chr4:79489087-79489106 MsG0480022992.01.T01:CDS 35.0%
! AATGGTTTGGATTAACCTGT+AGG + Chr4:79489523-79489542 None:intergenic 35.0%
! ATAATGAAAGCATGTTGCTG+TGG - Chr4:79490066-79490085 MsG0480022992.01.T01:intron 35.0%
! ATTTTGCGTGAAATGCTTGT+TGG - Chr4:79490361-79490380 MsG0480022992.01.T01:CDS 35.0%
! TTGATACTTGAGTTGCTTGT+CGG + Chr4:79489342-79489361 None:intergenic 35.0%
! TTTTCAATACAGACTGGAAG+TGG - Chr4:79489086-79489105 MsG0480022992.01.T01:CDS 35.0%
!! TGTGCTTATGCGTTGATTTA+GGG + Chr4:79488483-79488502 None:intergenic 35.0%
!! TTGTGCTTATGCGTTGATTT+AGG + Chr4:79488484-79488503 None:intergenic 35.0%
!! TTTTAGGTGGTGCTTCTATT+AGG - Chr4:79490183-79490202 MsG0480022992.01.T01:CDS 35.0%
AAGGGAAGACTACAATGGTT+TGG + Chr4:79489536-79489555 None:intergenic 40.0%
AATGTGAGCGATGGAATCAA+AGG + Chr4:79488804-79488823 None:intergenic 40.0%
ATTGTGGATGAGGAAAAGAG+TGG + Chr4:79488629-79488648 None:intergenic 40.0%
CAAAAATTAACAGGTGCAGC+AGG - Chr4:79491444-79491463 MsG0480022992.01.T01:five_prime_UTR 40.0%
CGGGATTTAGAAGAGAAATG+GGG + Chr4:79490620-79490639 None:intergenic 40.0%
CTAGTAGAGAATTGTTTGGC+TGG - Chr4:79488957-79488976 MsG0480022992.01.T01:intron 40.0%
CTCTGCAAATTGAAGATACG+AGG + Chr4:79491354-79491373 None:intergenic 40.0%
GCCAAACAATTCTCTACTAG+AGG + Chr4:79488957-79488976 None:intergenic 40.0%
GCCTCTAGTAGAGAATTGTT+TGG - Chr4:79488953-79488972 MsG0480022992.01.T01:intron 40.0%
GGAGCTTTCAGAATTTACAC+TGG + Chr4:79490761-79490780 None:intergenic 40.0%
GTTTACACATCTATCCCACA+GGG + Chr4:79490092-79490111 None:intergenic 40.0%
TATACTGTTATCTCGTGTCC+TGG - Chr4:79490830-79490849 MsG0480022992.01.T01:intron 40.0%
TGTTGTTGAATCTCGATGCA+AGG - Chr4:79490804-79490823 MsG0480022992.01.T01:intron 40.0%
TGTTTACACATCTATCCCAC+AGG + Chr4:79490093-79490112 None:intergenic 40.0%
TTCTTTGTCAATCAACGGTC+AGG - Chr4:79488772-79488791 MsG0480022992.01.T01:intron 40.0%
TTTGCACGCCTAAATGAAGT+GGG - Chr4:79489209-79489228 MsG0480022992.01.T01:intron 40.0%
! GTCTAAGACTAGTTCGACAA+TGG + Chr4:79489731-79489750 None:intergenic 40.0%
!! GGAGCATGTTTTTACTGTGA+AGG - Chr4:79489657-79489676 MsG0480022992.01.T01:intron 40.0%
!!! TTCTGTTTTTGCTTATGGGC+AGG - Chr4:79488989-79489008 MsG0480022992.01.T01:intron 40.0%
AACAATCCCTGCACAGTGAA+AGG + Chr4:79490718-79490737 None:intergenic 45.0%
AAGAAAAACCACCTTGACGC+CGG + Chr4:79488599-79488618 None:intergenic 45.0%
AAGAGTCGCTCAAAAACACG+AGG + Chr4:79489191-79489210 None:intergenic 45.0%
AAGGTTTGTCGCAATGGTGA+TGG + Chr4:79490246-79490265 None:intergenic 45.0%
AATCGTTGTGTCTCATGCGT+AGG - Chr4:79489301-79489320 MsG0480022992.01.T01:intron 45.0%
AGAGTCGCTCAAAAACACGA+GGG + Chr4:79489190-79489209 None:intergenic 45.0%
AGTAGCATCAATGTGAGCGA+TGG + Chr4:79488813-79488832 None:intergenic 45.0%
CTACGTCGAGAATCTTACAG+AGG - Chr4:79489636-79489655 MsG0480022992.01.T01:intron 45.0%
CTTTGCACGCCTAAATGAAG+TGG - Chr4:79489208-79489227 MsG0480022992.01.T01:intron 45.0%
TGCACAAGGGAAGACTACAA+TGG + Chr4:79489541-79489560 None:intergenic 45.0%
TGGGAAGACCTACACTATGT+GGG - Chr4:79489106-79489125 MsG0480022992.01.T01:CDS 45.0%
TTGAGAGGGTTATGGTGAGA+GGG + Chr4:79488538-79488557 None:intergenic 45.0%
TTTGAGAGGGTTATGGTGAG+AGG + Chr4:79488539-79488558 None:intergenic 45.0%
! ATTTTCGACCGCCAAAGCAT+TGG + Chr4:79489138-79489157 None:intergenic 45.0%
! TCGTTGCAAGCTTTTTGCGA+CGG + Chr4:79488420-79488439 None:intergenic 45.0%
! TTTTGCGACGGGAATCTGAA+CGG + Chr4:79488408-79488427 None:intergenic 45.0%
!! TCGTCTTTTTCACTGCTCAC+TGG + Chr4:79488719-79488738 None:intergenic 45.0%
!! TTGTCGCAATGGTGATGGAA+AGG + Chr4:79490241-79490260 None:intergenic 45.0%
!! TTTTCGACCGCCAAAGCATT+GGG + Chr4:79489137-79489156 None:intergenic 45.0%
!! TAAAAATTAGTTAAAAATTT+CGG + Chr4:79488654-79488673 None:intergenic 5.0%
!!! TTGTTTATTTTAATAATTTT+TGG - Chr4:79490593-79490612 MsG0480022992.01.T01:intron 5.0%
CATCGAGCTTGCGTTTGAGA+GGG + Chr4:79488552-79488571 None:intergenic 50.0%
CGCTCACATTGATGCTACTC+AGG - Chr4:79488814-79488833 MsG0480022992.01.T01:intron 50.0%
GACGGGAATCTGAACGGAAA+TGG + Chr4:79488402-79488421 None:intergenic 50.0%
GAGTCGCTCAAAAACACGAG+GGG + Chr4:79489189-79489208 None:intergenic 50.0%
GCTTGCGTTTGAGAGGGTTA+TGG + Chr4:79488546-79488565 None:intergenic 50.0%
GGGAAGACCTACACTATGTG+GGG - Chr4:79489107-79489126 MsG0480022992.01.T01:CDS 50.0%
GGGAATCTGAACGGAAATGG+TGG + Chr4:79488399-79488418 None:intergenic 50.0%
GTGGGAAGACCTACACTATG+TGG - Chr4:79489105-79489124 MsG0480022992.01.T01:CDS 50.0%
TATGGTGAGAGGGAGGCTTA+GGG + Chr4:79488528-79488547 None:intergenic 50.0%
TCATCGAGCTTGCGTTTGAG+AGG + Chr4:79488553-79488572 None:intergenic 50.0%
TGTTGCCAGCTTCCTTCAGA+CGG + Chr4:79491473-79491492 None:intergenic 50.0%
TTATGGTGAGAGGGAGGCTT+AGG + Chr4:79488529-79488548 None:intergenic 50.0%
! CGTTGCAAGCTTTTTGCGAC+GGG + Chr4:79488419-79488438 None:intergenic 50.0%
! TGCGTGAAATGCTTGTTGGC+AGG - Chr4:79490365-79490384 MsG0480022992.01.T01:CDS 50.0%
AACCACCTTGACGCCGGAAT+CGG + Chr4:79488593-79488612 None:intergenic 55.0%
AGAGGGTTATGGTGAGAGGG+AGG + Chr4:79488535-79488554 None:intergenic 55.0%
ATGGTGAGAGGGAGGCTTAG+GGG + Chr4:79488527-79488546 None:intergenic 55.0%
CACACTACCTCCTCCGATTC+CGG - Chr4:79488577-79488596 MsG0480022992.01.T01:intron 55.0%
GGATACCGTCTGAAGGAAGC+TGG - Chr4:79491465-79491484 MsG0480022992.01.T01:five_prime_UTR 55.0%
TGCAGCAGGATACCGTCTGA+AGG - Chr4:79491458-79491477 MsG0480022992.01.T01:five_prime_UTR 55.0%
AGCATGTTGCTGTGGCCCTG+TGG - Chr4:79490074-79490093 MsG0480022992.01.T01:intron 60.0%
GCATGTTGCTGTGGCCCTGT+GGG - Chr4:79490075-79490094 MsG0480022992.01.T01:intron 60.0%
GGGAGGACCCCACATAGTGT+AGG + Chr4:79489117-79489136 None:intergenic 60.0%
GGGTCCTCCCAATGCTTTGG+CGG - Chr4:79489127-79489146 MsG0480022992.01.T01:intron 60.0%
GTGGGGTCCTCCCAATGCTT+TGG - Chr4:79489124-79489143 MsG0480022992.01.T01:intron 60.0%
TGGTGAGAGGGAGGCTTAGG+GGG + Chr4:79488526-79488545 None:intergenic 60.0%
!! TCGACCGCCAAAGCATTGGG+AGG + Chr4:79489134-79489153 None:intergenic 60.0%
CACCTTGACGCCGGAATCGG+AGG + Chr4:79488590-79488609 None:intergenic 65.0%
CTCCGATTCCGGCGTCAAGG+TGG - Chr4:79488588-79488607 MsG0480022992.01.T01:intron 65.0%
CTCCTCCGATTCCGGCGTCA+AGG - Chr4:79488585-79488604 MsG0480022992.01.T01:intron 65.0%
CTTGACGCCGGAATCGGAGG+AGG + Chr4:79488587-79488606 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 79488335 79491527 79488335 ID=MsG0480022992.01;Name=MsG0480022992.01
Chr4 mRNA 79488335 79491527 79488335 ID=MsG0480022992.01.T01;Parent=MsG0480022992.01;Name=MsG0480022992.01.T01;_AED=0.50;_eAED=0.50;_QI=104|0.71|0.75|1|1|1|8|0|306
Chr4 exon 79488335 79488490 79488335 ID=MsG0480022992.01.T01:exon:3941;Parent=MsG0480022992.01.T01
Chr4 exon 79489037 79489132 79489037 ID=MsG0480022992.01.T01:exon:3940;Parent=MsG0480022992.01.T01
Chr4 exon 79490160 79490252 79490160 ID=MsG0480022992.01.T01:exon:3939;Parent=MsG0480022992.01.T01
Chr4 exon 79490336 79490389 79490336 ID=MsG0480022992.01.T01:exon:3938;Parent=MsG0480022992.01.T01
Chr4 exon 79490636 79490764 79490636 ID=MsG0480022992.01.T01:exon:3937;Parent=MsG0480022992.01.T01
Chr4 exon 79490852 79490935 79490852 ID=MsG0480022992.01.T01:exon:3936;Parent=MsG0480022992.01.T01
Chr4 exon 79491027 79491164 79491027 ID=MsG0480022992.01.T01:exon:3935;Parent=MsG0480022992.01.T01
Chr4 exon 79491253 79491527 79491253 ID=MsG0480022992.01.T01:exon:3934;Parent=MsG0480022992.01.T01
Chr4 five_prime_UTR 79491424 79491527 79491424 ID=MsG0480022992.01.T01:five_prime_utr;Parent=MsG0480022992.01.T01
Chr4 CDS 79491253 79491423 79491253 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Chr4 CDS 79491027 79491164 79491027 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Chr4 CDS 79490852 79490935 79490852 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Chr4 CDS 79490636 79490764 79490636 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Chr4 CDS 79490336 79490389 79490336 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Chr4 CDS 79490160 79490252 79490160 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Chr4 CDS 79489037 79489132 79489037 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Chr4 CDS 79488335 79488490 79488335 ID=MsG0480022992.01.T01:cds;Parent=MsG0480022992.01.T01
Gene Sequence

>MsG0480022992.01.T01

ATGACAATGAAGAATTTGCCGACTGTACCAAGAAATTCAAACCCTAAATCAACGCATAAGCACAAATTCAACAAAGAGAATAAACCCCCTAAGCCTCCCTCTCACCATAACCCTCTCAAACGCAAGCTCGATGATACTCACACTACCTCCTCCGATTCCGGCGTCAAGGTGGTTATTGTGAGGATGAAACCAGTGAGCAGTGAAAAAGACGAAGCAGATTCCATTGTTAAGAAAATTTCCAGCAATTCTTTGTCAATCAACGGTCAGGATTTCACCTTTGATTCCATCGCTCACATTGATGCTACTCAGCTTGATATTTTTGAGCTTATTGGTATGCCTCTAGTAGAGAATTGTTTGGCTGGGTTCAATAGTTCTGTTTTTGCTTATGGGCAGACTGGAAGTGGGAAGACCTACACTATGTGGGGTCCTCCCAATGCTTTGGCGGTCGAAAATTCATCAATTGATCAACAAGGAGGTCTCGCCCCTCGTGTTTTTGAGCGACTCTTTGCACGCCTAAATGAAATATACAATGAGCACATAACCGATCTGTTAGATCCGAATAAAAGAAACCTACAGATTAGAGAAGATGTTAAATCTGGAATCTACGTCGAGAATCTTACAGAGGAGCATGTTTTTACTGTGAAGGATGTAAATCAGCTTTTGATGAAGGGATTGTTAAACAGAACAATAGGTGCAACCAGTGTAAATTCTGAAAGCTCCCGTTCACACACTGTTTTTACTTGTGTTGTTGAATCTCGATGCAAGAGTATTGAAGATCGTAAAAGCAGATTTAAAACAAGTAAAATCAATCTTGTTGATTTAGCTGGGTCAGAACGACAAAAATTAACAGGTGCAGCAGGATACCGTCTGAAGGAAGCTGGCAACATTAATAGATCACTTTCACAACTTGGGTATGATTGA

Protein sequence

>MsG0480022992.01.T01

MTMKNLPTVPRNSNPKSTHKHKFNKENKPPKPPSHHNPLKRKLDDTHTTSSDSGVKVVIVRMKPVSSEKDEADSIVKKISSNSLSINGQDFTFDSIAHIDATQLDIFELIGMPLVENCLAGFNSSVFAYGQTGSGKTYTMWGPPNALAVENSSIDQQGGLAPRVFERLFARLNEIYNEHITDLLDPNKRNLQIREDVKSGIYVENLTEEHVFTVKDVNQLLMKGLLNRTIGATSVNSESSRSHTVFTCVVESRCKSIEDRKSRFKTSKINLVDLAGSERQKLTGAAGYRLKEAGNINRSLSQLGYD*