Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036534.01.T01 | KYP58465.1 | 100 | 136 | 0 | 0 | 1 | 136 | 5 | 140 | 1.76E-92 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036534.01.T01 | P68427 | 100 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 5.13E-95 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036534.01.T01 | A0A452Z7H5 | 100.000 | 136 | 0 | 0 | 1 | 136 | 100 | 235 | 3.73e-93 | 278 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0780036534.01 | 0.848588 | 5.570642e-60 | 1.027252e-56 |
| MsG0080048258.01 | MsG0780036534.01 | 0.829566 | 4.792081e-55 | 4.922707e-52 |
| MsG0080048775.01 | MsG0780036534.01 | 0.870540 | 1.351266e-66 | 5.275955e-63 |
| MsG0080048781.01 | MsG0780036534.01 | 0.821152 | 4.699613e-53 | 3.793205e-50 |
| MsG0180001293.01 | MsG0780036534.01 | 0.879724 | 9.866244e-70 | 5.407491e-66 |
| MsG0180001719.01 | MsG0780036534.01 | 0.826399 | 2.771353e-54 | 2.596193e-51 |
| MsG0180002134.01 | MsG0780036534.01 | 0.835394 | 1.721216e-56 | 2.102153e-53 |
| MsG0180002217.01 | MsG0780036534.01 | 0.826022 | 3.407414e-54 | 3.157962e-51 |
| MsG0180002218.01 | MsG0780036534.01 | 0.869690 | 2.563547e-66 | 9.707239e-63 |
| MsG0180002397.01 | MsG0780036534.01 | 0.879500 | 1.184323e-69 | 6.435833e-66 |
| MsG0180002428.01 | MsG0780036534.01 | 0.804094 | 2.547211e-49 | 1.301836e-46 |
| MsG0180002583.01 | MsG0780036534.01 | 0.828639 | 8.040472e-55 | 8.038622e-52 |
| MsG0180003485.01 | MsG0780036534.01 | 0.801254 | 9.817688e-49 | 4.666981e-46 |
| MsG0180003658.01 | MsG0780036534.01 | 0.834628 | 2.685804e-56 | 3.205368e-53 |
| MsG0180003698.01 | MsG0780036534.01 | 0.828826 | 7.244373e-55 | 7.281995e-52 |
| MsG0180003857.01 | MsG0780036534.01 | 0.877598 | 5.529046e-69 | 2.795892e-65 |
| MsG0180004120.01 | MsG0780036534.01 | 0.884173 | 2.403283e-71 | 1.569500e-67 |
| MsG0180004185.01 | MsG0780036534.01 | 0.857156 | 1.977194e-62 | 4.834485e-59 |
| MsG0180004299.01 | MsG0780036534.01 | 0.862513 | 4.804705e-64 | 1.410880e-60 |
| MsG0180004471.01 | MsG0780036534.01 | 0.806979 | 6.323760e-50 | 3.480422e-47 |
| MsG0180004538.01 | MsG0780036534.01 | 0.877964 | 4.115869e-69 | 2.110899e-65 |
| MsG0180004583.01 | MsG0780036534.01 | 0.887614 | 1.222661e-72 | 9.156794e-69 |
| MsG0180004835.01 | MsG0780036534.01 | 0.809091 | 2.245972e-50 | 1.306526e-47 |
| MsG0180004994.01 | MsG0780036534.01 | 0.808930 | 2.430988e-50 | 1.407989e-47 |
| MsG0180004995.01 | MsG0780036534.01 | 0.874674 | 5.614661e-68 | 2.549392e-64 |
| MsG0180005048.01 | MsG0780036534.01 | 0.892351 | 1.719537e-74 | 1.565960e-70 |
| MsG0180005655.01 | MsG0780036534.01 | 0.843083 | 1.742498e-58 | 2.695563e-55 |
| MsG0180006062.01 | MsG0780036534.01 | 0.820403 | 6.985198e-53 | 5.521990e-50 |
| MsG0180006133.01 | MsG0780036534.01 | 0.871929 | 4.699045e-67 | 1.929152e-63 |
| MsG0280010579.01 | MsG0780036534.01 | 0.835016 | 2.144017e-56 | 2.588749e-53 |
| MsG0280011083.01 | MsG0780036534.01 | 0.827984 | 1.156869e-54 | 1.134830e-51 |
| MsG0380012118.01 | MsG0780036534.01 | 0.805657 | 1.200658e-49 | 6.388099e-47 |
| MsG0380012956.01 | MsG0780036534.01 | 0.866503 | 2.717887e-65 | 9.181365e-62 |
| MsG0380013584.01 | MsG0780036534.01 | 0.830628 | 2.639325e-55 | 2.796101e-52 |
| MsG0380014542.01 | MsG0780036534.01 | 0.845301 | 4.422424e-59 | 7.337706e-56 |
| MsG0380014666.01 | MsG0780036534.01 | 0.899838 | 1.332662e-77 | 1.676902e-73 |
| MsG0380014751.01 | MsG0780036534.01 | 0.813447 | 2.547817e-51 | 1.664337e-48 |
| MsG0680033696.01 | MsG0780036534.01 | 0.811172 | 7.996451e-51 | 4.915121e-48 |
| MsG0680035350.01 | MsG0780036534.01 | 0.832230 | 1.064152e-55 | 1.182047e-52 |
| MsG0480018526.01 | MsG0780036534.01 | 0.811295 | 7.519686e-51 | 4.636955e-48 |
| MsG0480018785.01 | MsG0780036534.01 | 0.839795 | 1.279387e-57 | 1.786316e-54 |
| MsG0480020398.01 | MsG0780036534.01 | 0.862071 | 6.570294e-64 | 1.899408e-60 |
| MsG0480020856.01 | MsG0780036534.01 | 0.856951 | 2.273467e-62 | 5.519265e-59 |
| MsG0480020921.01 | MsG0780036534.01 | 0.877388 | 6.541669e-69 | 3.283671e-65 |
| MsG0480020926.01 | MsG0780036534.01 | 0.878607 | 2.449225e-69 | 1.287125e-65 |
| MsG0480020937.01 | MsG0780036534.01 | 0.811567 | 6.563302e-51 | 4.076575e-48 |
| MsG0480020969.01 | MsG0780036534.01 | 0.805483 | 1.305998e-49 | 6.917487e-47 |
| MsG0480020970.01 | MsG0780036534.01 | 0.827840 | 1.252376e-54 | 1.223252e-51 |
| MsG0480020971.01 | MsG0780036534.01 | 0.825915 | 3.612888e-54 | 3.338291e-51 |
| MsG0480021015.01 | MsG0780036534.01 | 0.834700 | 2.575798e-56 | 3.080343e-53 |
| MsG0480021016.01 | MsG0780036534.01 | 0.842435 | 2.590314e-58 | 3.927678e-55 |
| MsG0480021048.01 | MsG0780036534.01 | 0.823289 | 1.500950e-53 | 1.286901e-50 |
| MsG0480021100.01 | MsG0780036534.01 | 0.872886 | 2.252463e-67 | 9.579641e-64 |
| MsG0480021301.01 | MsG0780036534.01 | 0.894573 | 2.171867e-75 | 2.171252e-71 |
| MsG0480021456.01 | MsG0780036534.01 | 0.822825 | 1.924857e-53 | 1.629024e-50 |
| MsG0480021704.01 | MsG0780036534.01 | 0.830299 | 3.175746e-55 | 3.332303e-52 |
| MsG0480021773.01 | MsG0780036534.01 | 0.864851 | 9.028528e-65 | 2.875864e-61 |
| MsG0480021901.01 | MsG0780036534.01 | 0.800041 | 1.735919e-48 | 8.001710e-46 |
| MsG0480021902.01 | MsG0780036534.01 | 0.897790 | 9.991837e-77 | 1.146936e-72 |
| MsG0480022307.01 | MsG0780036534.01 | 0.884204 | 2.340605e-71 | 1.530655e-67 |
| MsG0480022378.01 | MsG0780036534.01 | 0.823275 | 1.512233e-53 | 1.296087e-50 |
| MsG0480022559.01 | MsG0780036534.01 | 0.836485 | 9.101084e-57 | 1.148530e-53 |
| MsG0480022682.01 | MsG0780036534.01 | 0.805879 | 1.078653e-49 | 5.771789e-47 |
| MsG0480022784.01 | MsG0780036534.01 | 0.883691 | 3.622318e-71 | 2.320797e-67 |
| MsG0480022991.01 | MsG0780036534.01 | 0.856452 | 3.186888e-62 | 7.610418e-59 |
| MsG0480022992.01 | MsG0780036534.01 | 0.815240 | 1.022994e-51 | 7.014407e-49 |
| MsG0480023003.01 | MsG0780036534.01 | 0.885889 | 5.509079e-72 | 3.847529e-68 |
| MsG0480023194.01 | MsG0780036534.01 | 0.805647 | 1.206505e-49 | 6.417545e-47 |
| MsG0480023296.01 | MsG0780036534.01 | 0.801915 | 7.188442e-49 | 3.474623e-46 |
| MsG0480023424.01 | MsG0780036534.01 | 0.893679 | 5.020383e-75 | 4.832490e-71 |
| MsG0480023426.01 | MsG0780036534.01 | 0.897609 | 1.190669e-76 | 1.355748e-72 |
| MsG0480023428.01 | MsG0780036534.01 | 0.839027 | 2.024788e-57 | 2.761131e-54 |
| MsG0480023653.01 | MsG0780036534.01 | 0.825375 | 4.852546e-54 | 4.414866e-51 |
| MsG0480023679.01 | MsG0780036534.01 | 0.823686 | 1.212122e-53 | 1.051140e-50 |
| MsG0480023706.01 | MsG0780036534.01 | 0.866930 | 1.988500e-65 | 6.820054e-62 |
| MsG0480023842.01 | MsG0780036534.01 | 0.809126 | 2.207252e-50 | 1.285238e-47 |
| MsG0480024002.01 | MsG0780036534.01 | 0.807024 | 6.186262e-50 | 3.408754e-47 |
| MsG0580024060.01 | MsG0780036534.01 | 0.815047 | 1.129308e-51 | 7.702909e-49 |
| MsG0580024276.01 | MsG0780036534.01 | 0.859299 | 4.553431e-63 | 1.196782e-59 |
| MsG0580024657.01 | MsG0780036534.01 | 0.808748 | 2.658968e-50 | 1.532663e-47 |
| MsG0580024742.01 | MsG0780036534.01 | 0.849100 | 4.015347e-60 | 7.529869e-57 |
| MsG0580024748.01 | MsG0780036534.01 | 0.822597 | 2.175776e-53 | 1.829597e-50 |
| MsG0580024787.01 | MsG0780036534.01 | 0.885162 | 1.031602e-71 | 7.005357e-68 |
| MsG0580025177.01 | MsG0780036534.01 | 0.868311 | 7.176114e-66 | 2.583674e-62 |
| MsG0580025186.01 | MsG0780036534.01 | 0.876887 | 9.763366e-69 | 4.813446e-65 |
| MsG0580025203.01 | MsG0780036534.01 | 0.818395 | 2.004369e-52 | 1.498680e-49 |
| MsG0580025504.01 | MsG0780036534.01 | 0.888255 | 6.941691e-73 | 5.337985e-69 |
| MsG0580025506.01 | MsG0780036534.01 | 0.849629 | 2.860155e-60 | 5.456129e-57 |
| MsG0580025775.01 | MsG0780036534.01 | 0.838869 | 2.225398e-57 | 3.020150e-54 |
| MsG0380015090.01 | MsG0780036534.01 | 0.892655 | 1.299275e-74 | 1.198728e-70 |
| MsG0380015219.01 | MsG0780036534.01 | 0.832679 | 8.238530e-56 | 9.274687e-53 |
| MsG0380015340.01 | MsG0780036534.01 | 0.875067 | 4.127069e-68 | 1.901676e-64 |
| MsG0380015394.01 | MsG0780036534.01 | 0.855165 | 7.576949e-62 | 1.733323e-58 |
| MsG0380015954.01 | MsG0780036534.01 | 0.846895 | 1.629010e-59 | 2.845236e-56 |
| MsG0380016027.01 | MsG0780036534.01 | 0.862017 | 6.825207e-64 | 1.969307e-60 |
| MsG0380016091.01 | MsG0780036534.01 | 0.832958 | 7.022546e-56 | 7.972093e-53 |
| MsG0380016092.01 | MsG0780036534.01 | 0.827186 | 1.797783e-54 | 1.722951e-51 |
| MsG0380016165.01 | MsG0780036534.01 | 0.830366 | 3.058318e-55 | 3.215594e-52 |
| MsG0380016217.01 | MsG0780036534.01 | 0.825182 | 5.389528e-54 | 4.877183e-51 |
| MsG0380016225.01 | MsG0780036534.01 | 0.839759 | 1.307724e-57 | 1.823664e-54 |
| MsG0380016722.01 | MsG0780036534.01 | 0.806692 | 7.271524e-50 | 3.972368e-47 |
| MsG0380017181.01 | MsG0780036534.01 | 0.811833 | 5.745723e-51 | 3.593869e-48 |
| MsG0380017282.01 | MsG0780036534.01 | 0.838094 | 3.527051e-57 | 4.674512e-54 |
| MsG0380017332.01 | MsG0780036534.01 | 0.827920 | 1.198250e-54 | 1.173138e-51 |
| MsG0380017361.01 | MsG0780036534.01 | 0.802306 | 5.971335e-49 | 2.915439e-46 |
| MsG0380017440.01 | MsG0780036534.01 | 0.808299 | 3.315754e-50 | 1.888977e-47 |
| MsG0380017605.01 | MsG0780036534.01 | 0.889333 | 2.660144e-73 | 2.137180e-69 |
| MsG0380017632.01 | MsG0780036534.01 | 0.866791 | 2.201386e-65 | 7.513016e-62 |
| MsG0380017696.01 | MsG0780036534.01 | 0.807394 | 5.165385e-50 | 2.873797e-47 |
| MsG0380017932.01 | MsG0780036534.01 | 0.835844 | 1.324630e-56 | 1.639622e-53 |
| MsG0380018055.01 | MsG0780036534.01 | 0.817518 | 3.163005e-52 | 2.308589e-49 |
| MsG0480018228.01 | MsG0780036534.01 | 0.855661 | 5.431889e-62 | 1.263445e-58 |
| MsG0580026141.01 | MsG0780036534.01 | 0.809998 | 1.434363e-50 | 8.547395e-48 |
| MsG0580028756.01 | MsG0780036534.01 | 0.818652 | 1.752948e-52 | 1.319852e-49 |
| MsG0580028923.01 | MsG0780036534.01 | 0.819545 | 1.098214e-52 | 8.476289e-50 |
| MsG0580028927.01 | MsG0780036534.01 | 0.846667 | 1.880316e-59 | 3.260778e-56 |
| MsG0580028955.01 | MsG0780036534.01 | 0.894981 | 1.477574e-75 | 1.503443e-71 |
| MsG0580029102.01 | MsG0780036534.01 | 0.840847 | 6.792996e-58 | 9.799983e-55 |
| MsG0580029123.01 | MsG0780036534.01 | 0.828602 | 8.208094e-55 | 8.197525e-52 |
| MsG0580029261.01 | MsG0780036534.01 | 0.805956 | 1.039003e-49 | 5.570696e-47 |
| MsG0580029591.01 | MsG0780036534.01 | 0.868496 | 6.255683e-66 | 2.267608e-62 |
| MsG0280006540.01 | MsG0780036534.01 | 0.816847 | 4.478781e-52 | 3.209267e-49 |
| MsG0280006563.01 | MsG0780036534.01 | 0.846929 | 1.594604e-59 | 2.788216e-56 |
| MsG0280007919.01 | MsG0780036534.01 | 0.838384 | 2.968758e-57 | 3.969880e-54 |
| MsG0280009866.01 | MsG0780036534.01 | 0.800401 | 1.466164e-48 | 6.820590e-46 |
| MsG0680035776.01 | MsG0780036534.01 | 0.858417 | 8.360509e-63 | 2.132242e-59 |
| MsG0680035792.01 | MsG0780036534.01 | 0.829548 | 4.839512e-55 | 4.968780e-52 |
| MsG0780036534.01 | MsG0780037741.01 | 0.850698 | 1.435411e-60 | 2.835559e-57 |
| MsG0780036534.01 | MsG0780038402.01 | 0.829848 | 4.091477e-55 | 4.238655e-52 |
| MsG0780036534.01 | MsG0780038736.01 | 0.888550 | 5.344547e-73 | 4.159458e-69 |
| MsG0780036534.01 | MsG0780039861.01 | 0.848434 | 6.144601e-60 | 1.127502e-56 |
| MsG0780036534.01 | MsG0780040364.01 | 0.805186 | 1.507102e-49 | 7.921993e-47 |
| MsG0780036534.01 | MsG0780040474.01 | 0.818505 | 1.892968e-52 | 1.419577e-49 |
| MsG0780036534.01 | MsG0780040620.01 | 0.898756 | 3.884039e-77 | 4.656761e-73 |
| MsG0780036534.01 | MsG0780040641.01 | 0.867079 | 1.781776e-65 | 6.141823e-62 |
| MsG0780036534.01 | MsG0780040671.01 | 0.826053 | 3.350789e-54 | 3.108173e-51 |
| MsG0780036534.01 | MsG0780040899.01 | 0.844832 | 5.921649e-59 | 9.679489e-56 |
| MsG0780036534.01 | MsG0780041008.01 | 0.830647 | 2.610375e-55 | 2.767177e-52 |
| MsG0780036534.01 | MsG0780041142.01 | 0.829092 | 6.245393e-55 | 6.327376e-52 |
| MsG0780036534.01 | MsG0780041143.01 | 0.817720 | 2.849212e-52 | 2.091061e-49 |
| MsG0780036534.01 | MsG0780041273.01 | 0.876061 | 1.883074e-68 | 9.001240e-65 |
| MsG0780036534.01 | MsG0780041340.01 | 0.836606 | 8.482278e-57 | 1.074240e-53 |
| MsG0780036534.01 | MsG0780041359.01 | 0.900458 | 7.182878e-78 | 9.299051e-74 |
| MsG0780036534.01 | MsG0780041546.01 | 0.838302 | 3.117362e-57 | 4.157630e-54 |
| MsG0780036534.01 | MsG0880041930.01 | 0.816359 | 5.758668e-52 | 4.071800e-49 |
| MsG0780036534.01 | MsG0880043684.01 | 0.812863 | 3.422221e-51 | 2.200235e-48 |
| MsG0780036534.01 | MsG0880043714.01 | 0.811618 | 6.397748e-51 | 3.978927e-48 |
| MsG0780036534.01 | MsG0880043752.01 | 0.855210 | 7.348262e-62 | 1.683534e-58 |
| MsG0780036534.01 | MsG0880044103.01 | 0.848919 | 4.509787e-60 | 8.406849e-57 |
| MsG0780036534.01 | MsG0880044437.01 | 0.862316 | 5.526079e-64 | 1.611432e-60 |
| MsG0780036534.01 | MsG0880045015.01 | 0.822390 | 2.430543e-53 | 2.031711e-50 |
| MsG0780036534.01 | MsG0880045439.01 | 0.810490 | 1.123042e-50 | 6.778907e-48 |
| MsG0780036534.01 | MsG0880045612.01 | 0.885067 | 1.119050e-71 | 7.570514e-68 |
| MsG0780036534.01 | MsG0880045647.01 | 0.880597 | 4.816475e-70 | 2.732515e-66 |
| MsG0780036534.01 | MsG0880045879.01 | 0.820354 | 7.169513e-53 | 5.659727e-50 |
| MsG0780036534.01 | MsG0880046431.01 | 0.800280 | 1.551906e-48 | 7.197302e-46 |
| MsG0780036534.01 | MsG0880046646.01 | 0.826427 | 2.729581e-54 | 2.559118e-51 |
| MsG0780036534.01 | MsG0880046904.01 | 0.889260 | 2.841093e-73 | 2.275296e-69 |
| MsG0780036534.01 | MsG0880046905.01 | 0.883513 | 4.210786e-71 | 2.677637e-67 |
| MsG0780036534.01 | MsG0880046906.01 | 0.823412 | 1.404476e-53 | 1.208297e-50 |
| MsG0780036534.01 | MsG0880047311.01 | 0.819507 | 1.120247e-52 | 8.637358e-50 |
| MsG0780036534.01 | MsG0880047649.01 | 0.894796 | 1.759624e-75 | 1.776710e-71 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036534.01.T01 | MTR_7g059070 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_5g029820 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_5g029770 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_4g065990 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_4g088150 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_2g035230 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_8g092720 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_8g063500 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_8g103245 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_8g092820 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
| MsG0780036534.01.T01 | MTR_7g013610 | 100.000 | 136 | 0 | 0 | 1 | 136 | 100 | 235 | 1.15e-95 | 275 |
| MsG0780036534.01.T01 | MTR_4g097175 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0780036534.01.T01 | MTR_1g023630 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0780036534.01.T01 | MTR_8g061940 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0780036534.01.T01 | MTR_8g099430 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.44e-92 | 264 |
| MsG0780036534.01.T01 | MTR_4g097170 | 96.324 | 136 | 5 | 0 | 1 | 136 | 42 | 177 | 2.38e-91 | 262 |
| MsG0780036534.01.T01 | MTR_2g082310 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.44e-86 | 248 |
| MsG0780036534.01.T01 | MTR_2g082340 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.44e-86 | 248 |
| MsG0780036534.01.T01 | MTR_2g082370 | 85.616 | 146 | 11 | 1 | 1 | 136 | 1 | 146 | 1.82e-82 | 238 |
| MsG0780036534.01.T01 | MTR_2g082400 | 84.559 | 136 | 19 | 2 | 1 | 135 | 1 | 135 | 6.64e-75 | 219 |
| MsG0780036534.01.T01 | MTR_7g013600 | 86.607 | 112 | 15 | 0 | 25 | 136 | 2 | 113 | 1.05e-65 | 195 |
| MsG0780036534.01.T01 | MTR_7g023830 | 67.164 | 134 | 43 | 1 | 1 | 134 | 1 | 133 | 6.74e-56 | 171 |
| MsG0780036534.01.T01 | MTR_1g023630 | 73.504 | 117 | 15 | 3 | 1 | 111 | 1 | 107 | 3.96e-52 | 160 |
| MsG0780036534.01.T01 | MTR_5g024630 | 67.241 | 116 | 35 | 2 | 1 | 116 | 1 | 113 | 1.69e-45 | 144 |
| MsG0780036534.01.T01 | MTR_7g023880 | 58.647 | 133 | 41 | 3 | 3 | 134 | 18 | 137 | 5.67e-43 | 139 |
| MsG0780036534.01.T01 | MTR_5g024530 | 68.182 | 110 | 12 | 2 | 19 | 128 | 68 | 154 | 4.74e-42 | 137 |
| MsG0780036534.01.T01 | MTR_0197s0100 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 1.50e-40 | 132 |
| MsG0780036534.01.T01 | MTR_8g027840 | 55.102 | 98 | 43 | 1 | 37 | 133 | 28 | 125 | 5.01e-30 | 105 |
| MsG0780036534.01.T01 | MTR_8g105150 | 53.846 | 91 | 10 | 1 | 37 | 127 | 11 | 69 | 1.48e-25 | 92.4 |
| MsG0780036534.01.T01 | MTR_8g092740 | 97.368 | 38 | 1 | 0 | 99 | 136 | 118 | 155 | 4.75e-20 | 80.9 |
| MsG0780036534.01.T01 | MTR_5g089120 | 76.190 | 42 | 10 | 0 | 82 | 123 | 6 | 47 | 6.26e-18 | 73.6 |
| MsG0780036534.01.T01 | MTR_5g024600 | 62.963 | 54 | 20 | 0 | 1 | 54 | 1 | 54 | 1.81e-15 | 66.2 |
| MsG0780036534.01.T01 | MTR_4g128040 | 75.676 | 37 | 9 | 0 | 79 | 115 | 20 | 56 | 3.48e-15 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036534.01.T01 | AT5G65360 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| MsG0780036534.01.T01 | AT5G10390 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| MsG0780036534.01.T01 | AT5G10400 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| MsG0780036534.01.T01 | AT3G27360 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| MsG0780036534.01.T01 | AT1G09200 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| MsG0780036534.01.T01 | AT5G10980 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| MsG0780036534.01.T01 | AT4G40040 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| MsG0780036534.01.T01 | AT4G40040 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| MsG0780036534.01.T01 | AT4G40040 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| MsG0780036534.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| MsG0780036534.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| MsG0780036534.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| MsG0780036534.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 29 | 164 | 7.04e-93 | 266 |
| MsG0780036534.01.T01 | AT5G65350 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 5.30e-91 | 260 |
| MsG0780036534.01.T01 | AT1G75600 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 1.25e-89 | 256 |
| MsG0780036534.01.T01 | AT1G13370 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 5.55e-89 | 254 |
| MsG0780036534.01.T01 | AT1G19890 | 89.781 | 137 | 13 | 1 | 1 | 136 | 1 | 137 | 1.07e-83 | 241 |
| MsG0780036534.01.T01 | AT5G12910 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 9.89e-67 | 198 |
| MsG0780036534.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| MsG0780036534.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| MsG0780036534.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| MsG0780036534.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
Find 27 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATTTCACGAACCAATCTT+TGG | 0.247437 | 7:+9430566 | None:intergenic |
| TTCTTCACTCCTCCGGTTGC+AGG | 0.260302 | 7:+9430679 | None:intergenic |
| TCACGAAGCGCAACTGTTCC+TGG | 0.296792 | 7:+9430640 | None:intergenic |
| GAAACTTCCATTCCAAAGAT+TGG | 0.376853 | 7:-9430578 | MsG0780036534.01.T01:CDS |
| GGACTTTCTTGCTGTTTGTT+TGG | 0.400331 | 7:+9430759 | None:intergenic |
| GCCGCTGAAGCGTATCTTGT+TGG | 0.409289 | 7:-9430484 | MsG0780036534.01.T01:CDS |
| CCGCTGAAGCGTATCTTGTT+GGG | 0.413778 | 7:-9430483 | MsG0780036534.01.T01:CDS |
| CTTGCAAGTTGAATATCCTT+AGG | 0.413826 | 7:+9430406 | None:intergenic |
| GAGCAGAAACAGCACTGCTC+TGG | 0.422418 | 7:+9430515 | None:intergenic |
| AGAGCACTGAGCTTCTCATT+AGG | 0.445355 | 7:-9430600 | MsG0780036534.01.T01:CDS |
| AGAAAATCAGCTCCTGCAAC+CGG | 0.461012 | 7:-9430691 | MsG0780036534.01.T01:CDS |
| TGGTGGCGAGTTGTTTCCGT+GGG | 0.469293 | 7:+9430722 | None:intergenic |
| GTGTGGCTTCTTCACTCCTC+CGG | 0.469362 | 7:+9430672 | None:intergenic |
| AAGAGTTACTATTATGCCTA+AGG | 0.508627 | 7:-9430422 | MsG0780036534.01.T01:CDS |
| TCACGAACCAATCTTTGGAA+TGG | 0.535409 | 7:+9430571 | None:intergenic |
| TTGGTGGCGAGTTGTTTCCG+TGG | 0.577381 | 7:+9430721 | None:intergenic |
| CAGTGCTCTTCTGATACTTG+CGG | 0.590815 | 7:+9430614 | None:intergenic |
| CAAACAGCAAGAAAGTCCAC+CGG | 0.628037 | 7:-9430754 | MsG0780036534.01.T01:CDS |
| CCCAACAAGATACGCTTCAG+CGG | 0.629084 | 7:+9430483 | None:intergenic |
| CCACCGGAGGAAAAGCCCCA+CGG | 0.632336 | 7:-9430738 | MsG0780036534.01.T01:CDS |
| AAGCCACACAGATTCCGTCC+AGG | 0.632383 | 7:-9430658 | MsG0780036534.01.T01:CDS |
| AAATCAGCTCCTGCAACCGG+AGG | 0.655480 | 7:-9430688 | MsG0780036534.01.T01:CDS |
| CAACTTGCAAGAAGAATCAG+AGG | 0.660238 | 7:-9430394 | MsG0780036534.01.T01:CDS |
| GAAGCGCAACTGTTCCTGGA+CGG | 0.668213 | 7:+9430644 | None:intergenic |
| ACAGCAAGAAAGTCCACCGG+AGG | 0.672804 | 7:-9430751 | MsG0780036534.01.T01:CDS |
| GTTCCTGGACGGAATCTGTG+TGG | 0.689851 | 7:+9430655 | None:intergenic |
| GGTGGCGAGTTGTTTCCGTG+GGG | 0.739791 | 7:+9430723 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGAGTTACTATTATGCCTA+AGG | - | Chr7:9430728-9430747 | MsG0780036534.01.T01:CDS | 30.0% | |
| GAAACTTCCATTCCAAAGAT+TGG | - | Chr7:9430572-9430591 | MsG0780036534.01.T01:CDS | 35.0% | |
| ! | CTTGCAAGTTGAATATCCTT+AGG | + | Chr7:9430747-9430766 | None:intergenic | 35.0% |
| CAACTTGCAAGAAGAATCAG+AGG | - | Chr7:9430756-9430775 | MsG0780036534.01.T01:CDS | 40.0% | |
| CGATTTCACGAACCAATCTT+TGG | + | Chr7:9430587-9430606 | None:intergenic | 40.0% | |
| ! | TCACGAACCAATCTTTGGAA+TGG | + | Chr7:9430582-9430601 | None:intergenic | 40.0% |
| !! | GGACTTTCTTGCTGTTTGTT+TGG | + | Chr7:9430394-9430413 | None:intergenic | 40.0% |
| AGAAAATCAGCTCCTGCAAC+CGG | - | Chr7:9430459-9430478 | MsG0780036534.01.T01:CDS | 45.0% | |
| CAAACAGCAAGAAAGTCCAC+CGG | - | Chr7:9430396-9430415 | MsG0780036534.01.T01:CDS | 45.0% | |
| CAGTGCTCTTCTGATACTTG+CGG | + | Chr7:9430539-9430558 | None:intergenic | 45.0% | |
| !! | AGAGCACTGAGCTTCTCATT+AGG | - | Chr7:9430550-9430569 | MsG0780036534.01.T01:CDS | 45.0% |
| !! | AGCTGATTTTCTTGCGGCTT+TGG | + | Chr7:9430451-9430470 | None:intergenic | 45.0% |
| !! | TGATTTTCTTGCGGCTTTGG+TGG | + | Chr7:9430448-9430467 | None:intergenic | 45.0% |
| !! | TGCAGGAGCTGATTTTCTTG+CGG | + | Chr7:9430457-9430476 | None:intergenic | 45.0% |
| CCCAACAAGATACGCTTCAG+CGG | + | Chr7:9430670-9430689 | None:intergenic | 50.0% | |
| CCGCTGAAGCGTATCTTGTT+GGG | - | Chr7:9430667-9430686 | MsG0780036534.01.T01:CDS | 50.0% | |
| AAATCAGCTCCTGCAACCGG+AGG | - | Chr7:9430462-9430481 | MsG0780036534.01.T01:CDS | 55.0% | |
| AAGCCACACAGATTCCGTCC+AGG | - | Chr7:9430492-9430511 | MsG0780036534.01.T01:CDS | 55.0% | |
| ACAGCAAGAAAGTCCACCGG+AGG | - | Chr7:9430399-9430418 | MsG0780036534.01.T01:CDS | 55.0% | |
| GAAGCGCAACTGTTCCTGGA+CGG | + | Chr7:9430509-9430528 | None:intergenic | 55.0% | |
| GAGCAGAAACAGCACTGCTC+TGG | + | Chr7:9430638-9430657 | None:intergenic | 55.0% | |
| GCCGCTGAAGCGTATCTTGT+TGG | - | Chr7:9430666-9430685 | MsG0780036534.01.T01:CDS | 55.0% | |
| GTGTGGCTTCTTCACTCCTC+CGG | + | Chr7:9430481-9430500 | None:intergenic | 55.0% | |
| GTTCCTGGACGGAATCTGTG+TGG | + | Chr7:9430498-9430517 | None:intergenic | 55.0% | |
| TCACGAAGCGCAACTGTTCC+TGG | + | Chr7:9430513-9430532 | None:intergenic | 55.0% | |
| TTCTTCACTCCTCCGGTTGC+AGG | + | Chr7:9430474-9430493 | None:intergenic | 55.0% | |
| ! | TGGTGGCGAGTTGTTTCCGT+GGG | + | Chr7:9430431-9430450 | None:intergenic | 55.0% |
| ! | TTTCCGTGGGGCTTTTCCTC+CGG | + | Chr7:9430418-9430437 | None:intergenic | 55.0% |
| !! | TTGGTGGCGAGTTGTTTCCG+TGG | + | Chr7:9430432-9430451 | None:intergenic | 55.0% |
| ! | GGTGGCGAGTTGTTTCCGTG+GGG | + | Chr7:9430430-9430449 | None:intergenic | 60.0% |
| CCACCGGAGGAAAAGCCCCA+CGG | - | Chr7:9430412-9430431 | MsG0780036534.01.T01:CDS | 65.0% | |
| ! | CCGTGGGGCTTTTCCTCCGG+TGG | + | Chr7:9430415-9430434 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 9430381 | 9430791 | 9430381 | ID=MsG0780036534.01;Name=MsG0780036534.01 |
| Chr7 | mRNA | 9430381 | 9430791 | 9430381 | ID=MsG0780036534.01.T01;Parent=MsG0780036534.01;Name=MsG0780036534.01.T01;_AED=0.41;_eAED=0.41;_QI=0|-1|0|1|-1|1|1|0|136 |
| Chr7 | exon | 9430381 | 9430791 | 9430381 | ID=MsG0780036534.01.T01:exon:10317;Parent=MsG0780036534.01.T01 |
| Chr7 | CDS | 9430381 | 9430791 | 9430381 | ID=MsG0780036534.01.T01:cds;Parent=MsG0780036534.01.T01 |
| Gene Sequence |
| Protein sequence |
