Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041142.01.T01 | XP_003625856.1 | 94.186 | 86 | 5 | 0 | 8 | 93 | 585 | 670 | 2.68E-44 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041142.01.T01 | O23826 | 56.471 | 85 | 37 | 0 | 8 | 92 | 584 | 668 | 2.73E-23 | 95.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041142.01.T01 | Q2HTE3 | 94.186 | 86 | 5 | 0 | 8 | 93 | 585 | 670 | 1.28e-44 | 163 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0780041142.01 | 0.809623 | 1.726628e-50 | 1.018838e-47 |
| MsG0080048258.01 | MsG0780041142.01 | 0.811608 | 6.430455e-51 | 3.998193e-48 |
| MsG0080048775.01 | MsG0780041142.01 | 0.849431 | 3.247504e-60 | 6.154742e-57 |
| MsG0080048781.01 | MsG0780041142.01 | 0.821214 | 4.546988e-53 | 3.676534e-50 |
| MsG0180001293.01 | MsG0780041142.01 | 0.833112 | 6.428627e-56 | 7.332298e-53 |
| MsG0180002134.01 | MsG0780041142.01 | 0.800969 | 1.122963e-48 | 5.300040e-46 |
| MsG0180002218.01 | MsG0780041142.01 | 0.843109 | 1.715289e-58 | 2.655788e-55 |
| MsG0180002397.01 | MsG0780041142.01 | 0.883065 | 6.150216e-71 | 3.840404e-67 |
| MsG0180002583.01 | MsG0780041142.01 | 0.841899 | 3.590729e-58 | 5.352345e-55 |
| MsG0180003485.01 | MsG0780041142.01 | 0.816020 | 6.858327e-52 | 4.804560e-49 |
| MsG0180003658.01 | MsG0780041142.01 | 0.862107 | 6.405248e-64 | 1.854092e-60 |
| MsG0180003698.01 | MsG0780041142.01 | 0.825190 | 5.365948e-54 | 4.856840e-51 |
| MsG0180003796.01 | MsG0780041142.01 | 0.837699 | 4.454343e-57 | 5.833585e-54 |
| MsG0180003857.01 | MsG0780041142.01 | 0.856962 | 2.256478e-62 | 5.480134e-59 |
| MsG0180004120.01 | MsG0780041142.01 | 0.807367 | 5.231898e-50 | 2.908708e-47 |
| MsG0180004126.01 | MsG0780041142.01 | 0.860344 | 2.204699e-63 | 6.006962e-60 |
| MsG0180004185.01 | MsG0780041142.01 | 0.819367 | 1.205740e-52 | 9.259353e-50 |
| MsG0180004299.01 | MsG0780041142.01 | 0.869499 | 2.957679e-66 | 1.112605e-62 |
| MsG0180004538.01 | MsG0780041142.01 | 0.835062 | 2.087377e-56 | 2.523723e-53 |
| MsG0180004583.01 | MsG0780041142.01 | 0.832791 | 7.728947e-56 | 8.729883e-53 |
| MsG0180004806.01 | MsG0780041142.01 | 0.810869 | 9.299628e-51 | 5.670872e-48 |
| MsG0180004995.01 | MsG0780041142.01 | 0.834486 | 2.914843e-56 | 3.464282e-53 |
| MsG0180005048.01 | MsG0780041142.01 | 0.850150 | 2.045543e-60 | 3.969164e-57 |
| MsG0180005835.01 | MsG0780041142.01 | 0.807557 | 4.768970e-50 | 2.664370e-47 |
| MsG0180006133.01 | MsG0780041142.01 | 0.850102 | 2.110125e-60 | 4.088120e-57 |
| MsG0780040364.01 | MsG0780041142.01 | 0.853313 | 2.594481e-61 | 5.582367e-58 |
| MsG0780040533.01 | MsG0780041142.01 | 0.803758 | 2.992135e-49 | 1.516063e-46 |
| MsG0780040620.01 | MsG0780041142.01 | 0.837728 | 4.380706e-57 | 5.741993e-54 |
| MsG0780040641.01 | MsG0780041142.01 | 0.859450 | 4.102876e-63 | 1.084046e-59 |
| MsG0780040828.01 | MsG0780041142.01 | 0.804108 | 2.529958e-49 | 1.293455e-46 |
| MsG0780040899.01 | MsG0780041142.01 | 0.804843 | 1.778511e-49 | 9.266852e-47 |
| MsG0780041132.01 | MsG0780041142.01 | 0.842487 | 2.509278e-58 | 3.810685e-55 |
| MsG0780041141.01 | MsG0780041142.01 | 0.825847 | 3.749098e-54 | 3.457634e-51 |
| MsG0780041142.01 | MsG0780041143.01 | 0.870438 | 1.459470e-66 | 5.676974e-63 |
| MsG0780041142.01 | MsG0780041273.01 | 0.809688 | 1.672409e-50 | 9.884857e-48 |
| MsG0780041142.01 | MsG0780041340.01 | 0.857618 | 1.443266e-62 | 3.584033e-59 |
| MsG0780041142.01 | MsG0780041359.01 | 0.843033 | 1.796675e-58 | 2.774998e-55 |
| MsG0780041142.01 | MsG0880041930.01 | 0.838960 | 2.107328e-57 | 2.867728e-54 |
| MsG0780041142.01 | MsG0880043752.01 | 0.815267 | 1.009188e-51 | 6.925212e-49 |
| MsG0780041142.01 | MsG0880044103.01 | 0.822289 | 2.565404e-53 | 2.138206e-50 |
| MsG0780041142.01 | MsG0880044340.01 | 0.811308 | 7.469905e-51 | 4.607875e-48 |
| MsG0780041142.01 | MsG0880044437.01 | 0.802393 | 5.731221e-49 | 2.804339e-46 |
| MsG0780041142.01 | MsG0880045612.01 | 0.843882 | 1.065779e-58 | 1.691067e-55 |
| MsG0780041142.01 | MsG0880045647.01 | 0.804843 | 1.777874e-49 | 9.263704e-47 |
| MsG0780041142.01 | MsG0880046431.01 | 0.855442 | 6.291366e-62 | 1.452756e-58 |
| MsG0780041142.01 | MsG0880046646.01 | 0.803591 | 3.239826e-49 | 1.634585e-46 |
| MsG0780041142.01 | MsG0880046885.01 | 0.825931 | 3.581676e-54 | 3.310945e-51 |
| MsG0780041142.01 | MsG0880046904.01 | 0.835681 | 1.456324e-56 | 1.793973e-53 |
| MsG0780041142.01 | MsG0880046906.01 | 0.810229 | 1.278506e-50 | 7.664185e-48 |
| MsG0780041142.01 | MsG0880047222.01 | 0.810663 | 1.030574e-50 | 6.249745e-48 |
| MsG0780041142.01 | MsG0880047226.01 | 0.802832 | 4.652535e-49 | 2.302189e-46 |
| MsG0780041142.01 | MsG0880047311.01 | 0.807408 | 5.129836e-50 | 2.855099e-47 |
| MsG0780041142.01 | MsG0880047640.01 | 0.805018 | 1.634840e-49 | 8.556178e-47 |
| MsG0780041142.01 | MsG0880047649.01 | 0.854521 | 1.164965e-61 | 2.608976e-58 |
| MsG0280010579.01 | MsG0780041142.01 | 0.854048 | 1.594973e-61 | 3.517529e-58 |
| MsG0280011083.01 | MsG0780041142.01 | 0.813960 | 1.964659e-51 | 1.301262e-48 |
| MsG0280011331.01 | MsG0780041142.01 | 0.808091 | 3.671967e-50 | 2.080486e-47 |
| MsG0380012788.01 | MsG0780041142.01 | 0.808652 | 2.787630e-50 | 1.602761e-47 |
| MsG0380012808.01 | MsG0780041142.01 | 0.806624 | 7.516917e-50 | 4.099128e-47 |
| MsG0380013584.01 | MsG0780041142.01 | 0.825086 | 5.677059e-54 | 5.123338e-51 |
| MsG0380014666.01 | MsG0780041142.01 | 0.851597 | 7.999687e-61 | 1.627389e-57 |
| MsG0680031616.01 | MsG0780041142.01 | 0.815448 | 9.197980e-52 | 6.343357e-49 |
| MsG0680032772.01 | MsG0780041142.01 | 0.837556 | 4.847247e-57 | 6.319320e-54 |
| MsG0680032773.01 | MsG0780041142.01 | 0.821359 | 4.209866e-53 | 3.417407e-50 |
| MsG0680033405.01 | MsG0780041142.01 | 0.814170 | 1.765333e-51 | 1.175943e-48 |
| MsG0680033696.01 | MsG0780041142.01 | 0.819522 | 1.111447e-52 | 8.573003e-50 |
| MsG0680034764.01 | MsG0780041142.01 | 0.803067 | 4.161101e-49 | 2.071090e-46 |
| MsG0680035350.01 | MsG0780041142.01 | 0.822316 | 2.529142e-53 | 2.109548e-50 |
| MsG0480018526.01 | MsG0780041142.01 | 0.863214 | 2.920032e-64 | 8.784719e-61 |
| MsG0480018785.01 | MsG0780041142.01 | 0.852636 | 4.054644e-61 | 8.526324e-58 |
| MsG0480018885.01 | MsG0780041142.01 | 0.806730 | 7.136168e-50 | 3.902439e-47 |
| MsG0480020856.01 | MsG0780041142.01 | 0.844428 | 7.609171e-59 | 1.228035e-55 |
| MsG0480021016.01 | MsG0780041142.01 | 0.821809 | 3.314929e-53 | 2.725322e-50 |
| MsG0480021301.01 | MsG0780041142.01 | 0.829726 | 4.381191e-55 | 4.522306e-52 |
| MsG0480021901.01 | MsG0780041142.01 | 0.839146 | 1.887000e-57 | 2.582440e-54 |
| MsG0480021902.01 | MsG0780041142.01 | 0.830073 | 3.606468e-55 | 3.759493e-52 |
| MsG0480022559.01 | MsG0780041142.01 | 0.812884 | 3.386171e-51 | 2.178409e-48 |
| MsG0480022784.01 | MsG0780041142.01 | 0.859151 | 5.041658e-63 | 1.318375e-59 |
| MsG0480022931.01 | MsG0780041142.01 | 0.851574 | 8.120465e-61 | 1.650827e-57 |
| MsG0480022982.01 | MsG0780041142.01 | 0.836040 | 1.181016e-56 | 1.470607e-53 |
| MsG0480022991.01 | MsG0780041142.01 | 0.849898 | 2.405723e-60 | 4.629905e-57 |
| MsG0480022992.01 | MsG0780041142.01 | 0.805717 | 1.166664e-49 | 6.217056e-47 |
| MsG0480023003.01 | MsG0780041142.01 | 0.867184 | 1.650413e-65 | 5.709557e-62 |
| MsG0480023158.01 | MsG0780041142.01 | 0.834611 | 2.711522e-56 | 3.234545e-53 |
| MsG0480023194.01 | MsG0780041142.01 | 0.868287 | 7.302163e-66 | 2.627123e-62 |
| MsG0480023262.01 | MsG0780041142.01 | 0.811888 | 5.588891e-51 | 3.500794e-48 |
| MsG0480023296.01 | MsG0780041142.01 | 0.842396 | 2.652405e-58 | 4.016783e-55 |
| MsG0480023424.01 | MsG0780041142.01 | 0.802227 | 6.199807e-49 | 3.020653e-46 |
| MsG0480023484.01 | MsG0780041142.01 | 0.812869 | 3.412494e-51 | 2.194347e-48 |
| MsG0480023672.01 | MsG0780041142.01 | 0.837773 | 4.263643e-57 | 5.596602e-54 |
| MsG0480023706.01 | MsG0780041142.01 | 0.843654 | 1.226582e-58 | 1.932361e-55 |
| MsG0480024002.01 | MsG0780041142.01 | 0.809776 | 1.600802e-50 | 9.484067e-48 |
| MsG0580024060.01 | MsG0780041142.01 | 0.800259 | 1.567144e-48 | 7.264036e-46 |
| MsG0580024657.01 | MsG0780041142.01 | 0.843062 | 1.765431e-58 | 2.729308e-55 |
| MsG0580024742.01 | MsG0780041142.01 | 0.838948 | 2.122630e-57 | 2.887506e-54 |
| MsG0580024787.01 | MsG0780041142.01 | 0.892351 | 1.719399e-74 | 1.565855e-70 |
| MsG0580024813.01 | MsG0780041142.01 | 0.849499 | 3.109559e-60 | 5.906396e-57 |
| MsG0580024954.01 | MsG0780041142.01 | 0.858368 | 8.642048e-63 | 2.200421e-59 |
| MsG0580025093.01 | MsG0780041142.01 | 0.833428 | 5.362311e-56 | 6.173669e-53 |
| MsG0580025177.01 | MsG0780041142.01 | 0.822025 | 2.953402e-53 | 2.442926e-50 |
| MsG0580025186.01 | MsG0780041142.01 | 0.838069 | 3.578585e-57 | 4.739458e-54 |
| MsG0580025506.01 | MsG0780041142.01 | 0.830035 | 3.684152e-55 | 3.836397e-52 |
| MsG0580025775.01 | MsG0780041142.01 | 0.853298 | 2.620546e-61 | 5.635472e-58 |
| MsG0380015058.01 | MsG0780041142.01 | 0.802087 | 6.624251e-49 | 3.216043e-46 |
| MsG0380015219.01 | MsG0780041142.01 | 0.867807 | 1.042211e-65 | 3.686198e-62 |
| MsG0380015394.01 | MsG0780041142.01 | 0.868125 | 8.236292e-66 | 2.946295e-62 |
| MsG0380016091.01 | MsG0780041142.01 | 0.826973 | 2.021722e-54 | 1.925487e-51 |
| MsG0380016092.01 | MsG0780041142.01 | 0.863149 | 3.059094e-64 | 9.181342e-61 |
| MsG0380016217.01 | MsG0780041142.01 | 0.863009 | 3.380262e-64 | 1.009615e-60 |
| MsG0380016225.01 | MsG0780041142.01 | 0.807053 | 6.100476e-50 | 3.363985e-47 |
| MsG0380016722.01 | MsG0780041142.01 | 0.809583 | 1.760848e-50 | 1.037910e-47 |
| MsG0380017164.01 | MsG0780041142.01 | 0.817030 | 4.072916e-52 | 2.933276e-49 |
| MsG0380017181.01 | MsG0780041142.01 | 0.818727 | 1.685746e-52 | 1.271923e-49 |
| MsG0380017282.01 | MsG0780041142.01 | 0.808429 | 3.110571e-50 | 1.778202e-47 |
| MsG0380017332.01 | MsG0780041142.01 | 0.822484 | 2.311529e-53 | 1.937314e-50 |
| MsG0380017361.01 | MsG0780041142.01 | 0.835380 | 1.735697e-56 | 2.118914e-53 |
| MsG0380017605.01 | MsG0780041142.01 | 0.850161 | 2.030956e-60 | 3.942379e-57 |
| MsG0380017632.01 | MsG0780041142.01 | 0.867060 | 1.807500e-65 | 6.226219e-62 |
| MsG0580027231.01 | MsG0780041142.01 | 0.801729 | 7.846683e-49 | 3.774871e-46 |
| MsG0580028756.01 | MsG0780041142.01 | 0.858947 | 5.805272e-63 | 1.507417e-59 |
| MsG0580028927.01 | MsG0780041142.01 | 0.818216 | 2.200169e-52 | 1.636821e-49 |
| MsG0580028955.01 | MsG0780041142.01 | 0.808344 | 3.243762e-50 | 1.850206e-47 |
| MsG0580029102.01 | MsG0780041142.01 | 0.805995 | 1.019535e-49 | 5.471917e-47 |
| MsG0580029123.01 | MsG0780041142.01 | 0.828875 | 7.047762e-55 | 7.094120e-52 |
| MsG0580029261.01 | MsG0780041142.01 | 0.802706 | 4.940634e-49 | 2.436765e-46 |
| MsG0580029591.01 | MsG0780041142.01 | 0.845059 | 5.141808e-59 | 8.465567e-56 |
| MsG0280006540.01 | MsG0780041142.01 | 0.860160 | 2.506972e-63 | 6.788479e-60 |
| MsG0280006563.01 | MsG0780041142.01 | 0.860264 | 2.331433e-63 | 6.334544e-60 |
| MsG0280007003.01 | MsG0780041142.01 | 0.817294 | 3.552229e-52 | 2.576680e-49 |
| MsG0280007359.01 | MsG0780041142.01 | 0.838540 | 2.706220e-57 | 3.636010e-54 |
| MsG0280009216.01 | MsG0780041142.01 | 0.803508 | 3.371399e-49 | 1.697324e-46 |
| MsG0280009752.01 | MsG0780041142.01 | 0.808521 | 2.973967e-50 | 1.704137e-47 |
| MsG0680035776.01 | MsG0780041142.01 | 0.853056 | 3.074845e-61 | 6.558438e-58 |
| MsG0680035878.01 | MsG0780041142.01 | 0.811641 | 6.325722e-51 | 3.936392e-48 |
| MsG0780036534.01 | MsG0780041142.01 | 0.829092 | 6.245393e-55 | 6.327376e-52 |
| MsG0780037741.01 | MsG0780041142.01 | 0.823171 | 1.598671e-53 | 1.366188e-50 |
| MsG0780038402.01 | MsG0780041142.01 | 0.838630 | 2.565653e-57 | 3.456897e-54 |
| MsG0780038445.01 | MsG0780041142.01 | 0.818542 | 1.856244e-52 | 1.393498e-49 |
| MsG0780038736.01 | MsG0780041142.01 | 0.829562 | 4.803679e-55 | 4.933972e-52 |
| MsG0780039861.01 | MsG0780041142.01 | 0.856816 | 2.491335e-62 | 6.019569e-59 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041142.01.T01 | MTR_7g105030 | 94.186 | 86 | 5 | 0 | 8 | 93 | 585 | 670 | 3.24e-48 | 163 |
| MsG0780041142.01.T01 | MTR_7g105030 | 94.186 | 86 | 5 | 0 | 8 | 93 | 585 | 670 | 3.24e-48 | 163 |
| MsG0780041142.01.T01 | MTR_1g059730 | 63.529 | 85 | 31 | 0 | 8 | 92 | 589 | 673 | 8.92e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041142.01.T01 | AT2G36200 | 52.941 | 85 | 40 | 0 | 8 | 92 | 588 | 672 | 9.86e-23 | 91.3 |
| MsG0780041142.01.T01 | AT2G36200 | 52.941 | 85 | 40 | 0 | 8 | 92 | 619 | 703 | 9.87e-23 | 91.3 |
Find 19 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATGACCGTGGGAGGATA+TGG | 0.333613 | 7:-87092710 | None:intergenic |
| CTTCTGTGGCCGCAGTTGTA+AGG | 0.441833 | 7:-87092848 | None:intergenic |
| ACAACTGCGGCCACAGAAGC+TGG | 0.453498 | 7:+87092852 | MsG0780041142.01.T01:CDS |
| AAATGTTGTGCGTTTGCATA+AGG | 0.469562 | 7:+87092651 | MsG0780041142.01.T01:CDS |
| TCAAATCGATAGCCGCCTAC+AGG | 0.494424 | 7:-87092574 | None:intergenic |
| GGCAAGCTCAGATGCATCGT+TGG | 0.542825 | 7:+87092672 | MsG0780041142.01.T01:CDS |
| TTCAATTGAATGACCGTGGG+AGG | 0.555275 | 7:-87092716 | None:intergenic |
| GAGACACATACACCGCCCTC+AGG | 0.567781 | 7:-87092612 | None:intergenic |
| AAATATTGAGCCAGCTTCTG+TGG | 0.569706 | 7:-87092862 | None:intergenic |
| TTCTTCAATTGAATGACCGT+GGG | 0.577395 | 7:-87092719 | None:intergenic |
| AAGCTCAGATGCATCGTTGG+AGG | 0.578206 | 7:+87092675 | MsG0780041142.01.T01:CDS |
| CTTCTTCAATTGAATGACCG+TGG | 0.584778 | 7:-87092720 | None:intergenic |
| TCATCTGCCATATCCTCCCA+CGG | 0.644594 | 7:+87092703 | MsG0780041142.01.T01:CDS |
| AAAGAGAAATGAAAGACCTG+AGG | 0.645617 | 7:+87092596 | MsG0780041142.01.T01:CDS |
| GGTGTATGTGTCTCATATTG+AGG | 0.648593 | 7:+87092621 | MsG0780041142.01.T01:CDS |
| AGCTGTCTTTCAACACAACA+TGG | 0.654858 | 7:+87092897 | MsG0780041142.01.T01:CDS |
| AAGAGAAATGAAAGACCTGA+GGG | 0.667452 | 7:+87092597 | MsG0780041142.01.T01:CDS |
| GAATCAGTTCCTTACAACTG+CGG | 0.678491 | 7:+87092839 | MsG0780041142.01.T01:intron |
| AGAAATGAAAGACCTGAGGG+CGG | 0.747256 | 7:+87092600 | MsG0780041142.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATACAATAAAAAGGTGT+TGG | - | Chr7:87092761-87092780 | None:intergenic | 20.0% |
| !! | TGAATTGACACTTTTTGCTA+GGG | + | Chr7:87092920-87092939 | MsG0780041142.01.T01:CDS | 30.0% |
| AAAGAGAAATGAAAGACCTG+AGG | + | Chr7:87092596-87092615 | MsG0780041142.01.T01:CDS | 35.0% | |
| AAATGTTGTGCGTTTGCATA+AGG | + | Chr7:87092651-87092670 | MsG0780041142.01.T01:CDS | 35.0% | |
| AAGAGAAATGAAAGACCTGA+GGG | + | Chr7:87092597-87092616 | MsG0780041142.01.T01:CDS | 35.0% | |
| GCGTTGAAAACAATGAAAAG+TGG | - | Chr7:87092796-87092815 | None:intergenic | 35.0% | |
| TTCTTCAATTGAATGACCGT+GGG | - | Chr7:87092722-87092741 | None:intergenic | 35.0% | |
| !! | GTGAATTGACACTTTTTGCT+AGG | + | Chr7:87092919-87092938 | MsG0780041142.01.T01:CDS | 35.0% |
| AAATATTGAGCCAGCTTCTG+TGG | - | Chr7:87092865-87092884 | None:intergenic | 40.0% | |
| AGCTGTCTTTCAACACAACA+TGG | + | Chr7:87092897-87092916 | MsG0780041142.01.T01:CDS | 40.0% | |
| CTTCTTCAATTGAATGACCG+TGG | - | Chr7:87092723-87092742 | None:intergenic | 40.0% | |
| GAATCAGTTCCTTACAACTG+CGG | + | Chr7:87092839-87092858 | MsG0780041142.01.T01:intron | 40.0% | |
| GGTGTATGTGTCTCATATTG+AGG | + | Chr7:87092621-87092640 | MsG0780041142.01.T01:CDS | 40.0% | |
| AGAAATGAAAGACCTGAGGG+CGG | + | Chr7:87092600-87092619 | MsG0780041142.01.T01:CDS | 45.0% | |
| TTCAATTGAATGACCGTGGG+AGG | - | Chr7:87092719-87092738 | None:intergenic | 45.0% | |
| !! | TAATTAATAATACAATAAAA+AGG | - | Chr7:87092767-87092786 | None:intergenic | 5.0% |
| AAGCTCAGATGCATCGTTGG+AGG | + | Chr7:87092675-87092694 | MsG0780041142.01.T01:CDS | 50.0% | |
| TCAAATCGATAGCCGCCTAC+AGG | - | Chr7:87092577-87092596 | None:intergenic | 50.0% | |
| TCATCTGCCATATCCTCCCA+CGG | + | Chr7:87092703-87092722 | MsG0780041142.01.T01:CDS | 50.0% | |
| TGAATGACCGTGGGAGGATA+TGG | - | Chr7:87092713-87092732 | None:intergenic | 50.0% | |
| CTTCTGTGGCCGCAGTTGTA+AGG | - | Chr7:87092851-87092870 | None:intergenic | 55.0% | |
| GGCAAGCTCAGATGCATCGT+TGG | + | Chr7:87092672-87092691 | MsG0780041142.01.T01:CDS | 55.0% | |
| ACAACTGCGGCCACAGAAGC+TGG | + | Chr7:87092852-87092871 | MsG0780041142.01.T01:CDS | 60.0% | |
| GAGACACATACACCGCCCTC+AGG | - | Chr7:87092615-87092634 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 87092571 | 87092965 | 87092571 | ID=MsG0780041142.01;Name=MsG0780041142.01 |
| Chr7 | mRNA | 87092571 | 87092965 | 87092571 | ID=MsG0780041142.01.T01;Parent=MsG0780041142.01;Name=MsG0780041142.01.T01;_AED=0.50;_eAED=0.53;_QI=0|1|0|1|1|1|2|0|96 |
| Chr7 | exon | 87092571 | 87092741 | 87092571 | ID=MsG0780041142.01.T01:exon:52149;Parent=MsG0780041142.01.T01 |
| Chr7 | exon | 87092846 | 87092965 | 87092846 | ID=MsG0780041142.01.T01:exon:52150;Parent=MsG0780041142.01.T01 |
| Chr7 | CDS | 87092571 | 87092741 | 87092571 | ID=MsG0780041142.01.T01:cds;Parent=MsG0780041142.01.T01 |
| Chr7 | CDS | 87092846 | 87092965 | 87092846 | ID=MsG0780041142.01.T01:cds;Parent=MsG0780041142.01.T01 |
| Gene Sequence |
| Protein sequence |
