AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032772.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032772.01.T01 MTR_6g053680 97.324 299 8 0 1 299 1 299 0.0 617
MsG0680032772.01.T01 MTR_7g061020 39.806 309 169 8 5 299 25 330 3.30e-62 209
MsG0680032772.01.T01 MTR_5g025100 28.239 301 200 7 5 295 889 1183 8.48e-29 117
MsG0680032772.01.T01 MTR_2g055910 29.699 266 177 6 38 295 106 369 2.74e-28 115
MsG0680032772.01.T01 MTR_1g067630 27.469 324 201 8 6 299 55 374 8.13e-28 114
MsG0680032772.01.T01 MTR_8g072430 30.476 315 175 11 5 295 875 1169 7.75e-27 111
MsG0680032772.01.T01 MTR_4g071210 28.990 307 193 12 6 300 90 383 4.84e-26 109
MsG0680032772.01.T01 MTR_4g071210 28.990 307 193 12 6 300 90 383 4.89e-26 109
MsG0680032772.01.T01 MTR_3g117330 28.477 302 192 11 6 295 100 389 9.73e-26 108
MsG0680032772.01.T01 MTR_3g100270 30.605 281 160 9 51 299 48 325 9.93e-26 108
MsG0680032772.01.T01 MTR_7g075060 29.927 274 165 5 48 295 95 367 1.94e-25 107
MsG0680032772.01.T01 MTR_4g087040 30.796 289 169 10 34 295 219 503 9.91e-25 105
MsG0680032772.01.T01 MTR_1g082920 28.571 301 200 9 6 295 148 444 8.16e-24 102
MsG0680032772.01.T01 MTR_5g096570 29.299 314 185 14 6 295 435 735 1.30e-23 102
MsG0680032772.01.T01 MTR_8g098230 29.221 308 193 12 6 295 484 784 2.07e-23 101
MsG0680032772.01.T01 MTR_7g105030 28.364 275 166 8 51 295 56 329 2.23e-23 101
MsG0680032772.01.T01 MTR_7g105030 28.364 275 166 8 51 295 56 329 2.23e-23 101
MsG0680032772.01.T01 MTR_2g101990 31.418 261 151 11 54 299 238 485 2.28e-23 101
MsG0680032772.01.T01 MTR_8g098230 29.206 315 192 13 6 295 484 792 2.79e-23 100
MsG0680032772.01.T01 MTR_4g112350 29.134 254 169 5 51 295 176 427 4.06e-23 100
MsG0680032772.01.T01 MTR_5g066320 31.203 266 148 9 66 299 72 334 5.66e-23 100
MsG0680032772.01.T01 MTR_3g102170 28.000 300 159 11 51 299 47 340 6.10e-23 100
MsG0680032772.01.T01 MTR_1g059730 29.434 265 152 10 66 300 75 334 7.14e-23 99.8
MsG0680032772.01.T01 MTR_5g031470 30.000 260 166 9 47 295 440 694 1.45e-22 99.0
MsG0680032772.01.T01 MTR_5g049620 28.339 307 199 11 2 295 371 669 2.04e-22 98.6
MsG0680032772.01.T01 MTR_5g049820 28.339 307 199 11 2 295 371 669 2.21e-22 98.2
MsG0680032772.01.T01 MTR_2g096010 26.838 272 169 8 54 300 99 365 2.83e-22 98.2
MsG0680032772.01.T01 MTR_6g086735 27.799 259 163 8 54 299 168 415 6.04e-22 97.1
MsG0680032772.01.T01 MTR_3g060900 28.981 314 178 14 6 295 439 731 6.70e-22 97.1
MsG0680032772.01.T01 MTR_6g086735 28.516 256 165 8 54 299 168 415 7.17e-22 96.7
MsG0680032772.01.T01 MTR_1g484960 29.508 305 187 11 4 291 2 295 1.17e-21 96.3
MsG0680032772.01.T01 MTR_7g091290 29.588 267 166 8 69 319 453 713 1.75e-21 95.9
MsG0680032772.01.T01 MTR_1g018940 30.824 279 137 12 71 299 68 340 2.07e-21 95.5
MsG0680032772.01.T01 MTR_7g093720 27.869 305 201 10 6 300 74 369 3.67e-21 94.7
MsG0680032772.01.T01 MTR_2g069950 27.393 303 202 8 6 295 341 638 5.45e-21 94.4
MsG0680032772.01.T01 MTR_7g113520 26.246 301 207 8 6 295 128 424 6.30e-21 94.0
MsG0680032772.01.T01 MTR_5g011500 28.467 274 164 7 51 295 103 373 6.65e-21 94.0
MsG0680032772.01.T01 MTR_2g087840 26.791 321 193 11 6 295 89 398 1.06e-20 93.6
MsG0680032772.01.T01 MTR_7g112420 32.627 236 144 9 70 295 466 696 1.22e-20 93.2
MsG0680032772.01.T01 MTR_2g436650 28.358 268 168 8 51 299 168 430 1.27e-20 93.2
MsG0680032772.01.T01 MTR_3g113110 27.419 310 195 11 4 295 18 315 1.29e-20 93.2
MsG0680032772.01.T01 MTR_4g094882 27.152 302 169 9 48 299 48 348 1.38e-20 93.2
MsG0680032772.01.T01 MTR_2g436650 28.358 268 168 8 51 299 248 510 1.53e-20 92.8
MsG0680032772.01.T01 MTR_4g124650 26.367 311 207 11 4 303 142 441 9.45e-20 90.5
MsG0680032772.01.T01 MTR_1g083770 29.961 257 162 8 70 310 472 726 9.52e-20 90.5
MsG0680032772.01.T01 MTR_5g021650 25.806 310 201 9 4 295 19 317 9.94e-20 90.5
MsG0680032772.01.T01 MTR_4g119980 27.778 270 165 10 51 299 256 516 1.31e-19 90.1
MsG0680032772.01.T01 MTR_7g112420 31.076 251 156 9 70 306 336 583 1.56e-19 89.7
MsG0680032772.01.T01 MTR_1g017540 28.417 278 179 7 47 306 42 317 2.40e-19 89.4
MsG0680032772.01.T01 MTR_1g081800 28.788 264 164 7 51 295 128 386 2.61e-19 89.0
MsG0680032772.01.T01 MTR_7g109130 29.885 261 154 10 70 310 240 491 4.22e-19 88.6
MsG0680032772.01.T01 MTR_7g109130 29.885 261 154 10 70 310 161 412 4.26e-19 88.6
MsG0680032772.01.T01 MTR_7g109130 29.851 268 145 10 70 310 462 713 6.79e-19 87.8
MsG0680032772.01.T01 MTR_7g109130 30.627 271 142 12 70 310 462 716 1.55e-18 87.0
MsG0680032772.01.T01 MTR_1g087880 27.937 315 185 14 6 295 397 694 1.62e-18 87.0
MsG0680032772.01.T01 MTR_7g091290 27.059 255 147 5 69 319 450 669 5.03e-18 85.5
MsG0680032772.01.T01 MTR_4g092140 24.843 318 206 9 6 295 318 630 5.16e-18 85.1
MsG0680032772.01.T01 MTR_8g471180 28.731 268 172 9 35 294 176 432 1.50e-17 84.0
MsG0680032772.01.T01 MTR_4g071900 24.601 313 207 11 4 299 23 323 2.53e-17 83.2
MsG0680032772.01.T01 MTR_8g076190 24.116 311 205 10 4 295 18 316 3.74e-17 82.8
MsG0680032772.01.T01 MTR_2g010760 29.104 268 168 11 46 295 474 737 6.01e-17 82.0
MsG0680032772.01.T01 MTR_8g076190 24.679 312 202 11 4 295 18 316 6.09e-17 82.0
MsG0680032772.01.T01 MTR_3g084790 28.571 259 150 11 73 299 158 413 1.73e-16 80.9
MsG0680032772.01.T01 MTR_2g082570 26.693 251 158 5 70 295 464 713 2.75e-16 80.1
MsG0680032772.01.T01 MTR_8g076190 23.438 320 207 10 2 295 16 323 2.75e-16 80.1
MsG0680032772.01.T01 MTR_8g080910 30.469 256 142 10 73 295 113 365 3.10e-16 80.1
MsG0680032772.01.T01 MTR_6g082470 26.045 311 203 11 5 299 30 329 3.55e-16 79.7
MsG0680032772.01.T01 MTR_4g081390 27.200 250 157 5 70 295 497 745 3.82e-16 79.7
MsG0680032772.01.T01 MTR_4g123730 26.374 273 173 9 49 295 189 459 6.67e-15 76.3
MsG0680032772.01.T01 MTR_8g104200 29.644 253 138 8 70 295 578 817 2.63e-14 74.3
MsG0680032772.01.T01 MTR_4g081390 26.360 239 151 5 70 284 499 736 1.27e-13 72.0
MsG0680032772.01.T01 MTR_5g094310 24.910 277 171 10 50 293 108 380 2.76e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032772.01.T01 AT5G23910 52.574 272 118 6 35 302 36 300 2.61e-80 258
MsG0680032772.01.T01 AT5G23910 52.574 272 118 6 35 302 40 304 2.76e-80 258
MsG0680032772.01.T01 AT5G02370 42.951 305 157 7 6 299 21 319 1.17e-66 219
MsG0680032772.01.T01 AT5G65930 28.094 299 203 6 5 295 887 1181 1.26e-27 114
MsG0680032772.01.T01 AT5G65930 28.094 299 203 6 5 295 888 1182 1.31e-27 114
MsG0680032772.01.T01 AT5G65930 28.094 299 203 6 5 295 894 1188 1.33e-27 114
MsG0680032772.01.T01 AT1G18550 31.225 253 164 6 51 295 204 454 1.70e-27 113
MsG0680032772.01.T01 AT2G22610 29.236 301 196 10 6 295 418 712 1.08e-25 108
MsG0680032772.01.T01 AT2G22610 29.236 301 196 10 6 295 419 713 1.14e-25 108
MsG0680032772.01.T01 AT2G22610 29.236 301 196 10 6 295 418 712 1.24e-25 108
MsG0680032772.01.T01 AT1G12430 29.670 273 161 6 51 295 116 385 1.84e-24 104
MsG0680032772.01.T01 AT1G12430 29.670 273 161 6 51 295 116 385 1.84e-24 104
MsG0680032772.01.T01 AT2G37420 29.562 274 167 7 51 299 95 367 2.83e-24 103
MsG0680032772.01.T01 AT2G37420 29.562 274 167 7 51 299 95 367 2.83e-24 103
MsG0680032772.01.T01 AT4G39050 28.523 298 197 10 6 295 99 388 3.01e-24 103
MsG0680032772.01.T01 AT5G60930 29.912 341 182 14 6 299 7 337 1.07e-23 102
MsG0680032772.01.T01 AT5G60930 29.912 341 182 14 6 299 7 337 1.10e-23 102
MsG0680032772.01.T01 AT5G60930 29.912 341 182 14 6 299 7 337 1.85e-23 101
MsG0680032772.01.T01 AT5G47820 29.861 288 142 11 66 299 66 347 2.86e-23 100
MsG0680032772.01.T01 AT5G47820 29.861 288 142 11 66 299 66 347 2.86e-23 100
MsG0680032772.01.T01 AT3G44730 28.981 314 186 15 6 295 423 723 8.00e-23 99.8
MsG0680032772.01.T01 AT3G44730 28.981 314 186 15 6 295 423 723 8.00e-23 99.8
MsG0680032772.01.T01 AT3G44730 29.524 315 183 16 6 295 378 678 8.53e-23 99.8
MsG0680032772.01.T01 AT3G44730 29.524 315 183 16 6 295 378 678 8.53e-23 99.8
MsG0680032772.01.T01 AT2G36200 29.615 260 152 7 66 295 74 332 1.10e-22 99.4
MsG0680032772.01.T01 AT2G36200 29.615 260 152 7 66 295 74 332 1.52e-22 99.0
MsG0680032772.01.T01 AT1G55550 26.103 272 189 5 35 295 114 384 1.82e-22 98.6
MsG0680032772.01.T01 AT1G01950 29.044 272 164 6 51 295 106 375 1.84e-22 98.6
MsG0680032772.01.T01 AT5G06670 25.974 308 211 7 2 300 63 362 1.91e-22 98.6
MsG0680032772.01.T01 AT5G06670 25.974 308 211 7 2 300 63 362 1.91e-22 98.6
MsG0680032772.01.T01 AT5G06670 25.974 308 211 7 2 300 63 362 1.91e-22 98.6
MsG0680032772.01.T01 AT1G01950 29.927 274 159 8 51 295 106 375 2.08e-22 98.6
MsG0680032772.01.T01 AT5G06670 26.316 304 207 7 6 300 67 362 2.28e-22 98.2
MsG0680032772.01.T01 AT1G01950 29.927 274 159 8 51 295 106 375 2.71e-22 98.2
MsG0680032772.01.T01 AT5G27950 27.547 265 174 5 47 295 115 377 3.36e-22 97.4
MsG0680032772.01.T01 AT3G45850 26.277 274 176 8 51 299 102 374 3.78e-22 97.8
MsG0680032772.01.T01 AT3G45850 26.277 274 176 8 51 299 102 374 3.78e-22 97.8
MsG0680032772.01.T01 AT2G28620 28.462 260 156 8 66 300 112 366 4.58e-22 97.4
MsG0680032772.01.T01 AT1G72250 27.723 303 202 8 6 295 501 799 4.71e-22 97.4
MsG0680032772.01.T01 AT2G28620 28.462 260 156 8 66 300 112 366 5.17e-22 97.4
MsG0680032772.01.T01 AT2G28620 28.462 260 156 8 66 300 112 366 5.17e-22 97.4
MsG0680032772.01.T01 AT1G72250 27.723 303 202 8 6 295 513 811 5.18e-22 97.4
MsG0680032772.01.T01 AT1G72250 27.723 303 202 8 6 295 512 810 5.33e-22 97.4
MsG0680032772.01.T01 AT2G21380 30.233 258 168 10 51 300 145 398 6.20e-22 97.1
MsG0680032772.01.T01 AT2G21380 30.233 258 168 10 51 300 145 398 6.20e-22 97.1
MsG0680032772.01.T01 AT1G72250 27.723 303 202 8 6 295 492 790 6.22e-22 97.1
MsG0680032772.01.T01 AT5G27550 27.243 301 204 9 6 295 133 429 9.68e-22 96.3
MsG0680032772.01.T01 AT5G27550 27.243 301 204 9 6 295 133 429 9.68e-22 96.3
MsG0680032772.01.T01 AT5G06670 26.316 304 207 7 6 300 67 362 1.15e-21 96.3
MsG0680032772.01.T01 AT5G06670 26.316 304 207 7 6 300 67 362 1.15e-21 96.3
MsG0680032772.01.T01 AT5G27000 29.503 322 203 13 6 310 395 709 4.69e-21 94.4
MsG0680032772.01.T01 AT3G49650 30.741 270 168 8 50 305 65 329 6.79e-21 94.0
MsG0680032772.01.T01 AT3G16060 30.233 258 158 10 54 299 222 469 7.28e-21 93.6
MsG0680032772.01.T01 AT1G21730 26.159 302 201 9 6 295 76 367 1.64e-20 92.8
MsG0680032772.01.T01 AT3G12020 26.797 306 203 8 6 300 70 365 1.88e-20 92.8
MsG0680032772.01.T01 AT3G12020 26.797 306 203 8 6 300 70 365 1.88e-20 92.8
MsG0680032772.01.T01 AT1G18410 30.612 245 136 7 70 295 696 925 2.11e-20 92.4
MsG0680032772.01.T01 AT3G63480 27.215 316 198 11 6 298 4 310 2.21e-20 91.7
MsG0680032772.01.T01 AT1G18410 30.612 245 136 7 70 295 543 772 2.94e-20 92.0
MsG0680032772.01.T01 AT1G18410 30.120 249 140 7 70 295 696 933 3.13e-20 92.0
MsG0680032772.01.T01 AT1G18410 30.120 249 140 7 70 295 553 790 3.63e-20 91.7
MsG0680032772.01.T01 AT1G18410 30.120 249 140 7 70 295 553 790 3.63e-20 91.7
MsG0680032772.01.T01 AT3G10310 29.368 269 166 8 69 319 424 686 4.00e-20 91.7
MsG0680032772.01.T01 AT3G10310 29.368 269 166 8 69 319 424 686 4.40e-20 91.7
MsG0680032772.01.T01 AT3G12020 26.797 306 203 8 6 300 70 365 8.35e-20 90.9
MsG0680032772.01.T01 AT3G12020 26.797 306 203 8 6 300 70 365 8.35e-20 90.9
MsG0680032772.01.T01 AT5G66310 25.163 306 208 9 4 295 17 315 1.63e-19 89.7
MsG0680032772.01.T01 AT5G66310 25.163 306 208 9 4 295 17 315 1.63e-19 89.7
MsG0680032772.01.T01 AT5G66310 25.163 306 208 9 4 295 17 315 1.63e-19 89.7
MsG0680032772.01.T01 AT3G17360 28.467 274 166 9 49 295 208 478 1.87e-19 89.7
MsG0680032772.01.T01 AT3G17360 28.467 274 166 9 49 295 208 478 1.97e-19 89.7
MsG0680032772.01.T01 AT3G17360 28.467 274 166 9 49 295 208 478 2.01e-19 89.7
MsG0680032772.01.T01 AT1G73860 30.000 250 140 7 70 295 490 728 2.24e-19 89.4
MsG0680032772.01.T01 AT3G44050 28.231 294 170 10 34 295 119 403 2.38e-19 89.4
MsG0680032772.01.T01 AT3G50240 26.000 300 165 10 51 299 64 357 3.28e-19 89.0
MsG0680032772.01.T01 AT1G73860 30.000 250 140 7 70 295 573 811 3.36e-19 89.0
MsG0680032772.01.T01 AT3G50240 26.000 300 165 10 51 299 64 357 4.27e-19 88.6
MsG0680032772.01.T01 AT3G50240 25.085 295 174 7 51 299 64 357 4.27e-19 88.6
MsG0680032772.01.T01 AT3G63480 27.187 320 197 12 6 298 4 314 4.59e-19 87.8
MsG0680032772.01.T01 AT3G54870 28.205 273 168 10 47 295 146 414 5.61e-19 88.2
MsG0680032772.01.T01 AT3G54870 28.205 273 168 10 47 295 146 414 6.08e-19 88.2
MsG0680032772.01.T01 AT3G54870 28.205 273 168 10 47 295 146 414 6.16e-19 88.2
MsG0680032772.01.T01 AT5G06670 25.559 313 207 8 6 300 67 371 6.25e-19 88.2
MsG0680032772.01.T01 AT5G06670 25.559 313 207 8 6 300 67 371 6.25e-19 88.2
MsG0680032772.01.T01 AT2G21300 24.841 314 205 11 4 299 23 323 8.12e-19 87.8
MsG0680032772.01.T01 AT2G21300 24.841 314 205 11 4 299 23 323 8.12e-19 87.8
MsG0680032772.01.T01 AT2G21300 24.841 314 205 11 4 299 23 323 8.12e-19 87.8
MsG0680032772.01.T01 AT2G21300 24.841 314 205 11 4 299 23 323 8.12e-19 87.8
MsG0680032772.01.T01 AT2G21300 24.841 314 205 11 4 299 23 323 8.12e-19 87.8
MsG0680032772.01.T01 AT2G47500 26.452 310 196 10 6 295 400 697 1.29e-18 87.0
MsG0680032772.01.T01 AT2G47500 26.452 310 196 10 6 295 400 697 1.94e-18 86.7
MsG0680032772.01.T01 AT3G10180 28.852 305 190 9 4 291 2 296 2.88e-18 86.3
MsG0680032772.01.T01 AT3G10180 28.852 305 190 9 4 291 2 296 2.99e-18 86.3
MsG0680032772.01.T01 AT5G65460 27.668 253 167 5 51 295 181 425 3.36e-18 85.9
MsG0680032772.01.T01 AT3G16630 26.829 328 190 15 5 299 193 503 3.67e-18 85.9
MsG0680032772.01.T01 AT3G16630 26.829 328 190 15 5 299 193 503 3.67e-18 85.9
MsG0680032772.01.T01 AT5G65460 27.668 253 167 5 51 295 181 425 4.45e-18 85.5
MsG0680032772.01.T01 AT1G09170 27.331 311 193 13 6 295 435 733 5.15e-18 85.5
MsG0680032772.01.T01 AT5G65460 27.668 253 167 5 51 295 181 425 5.16e-18 85.5
MsG0680032772.01.T01 AT1G09170 26.537 309 198 11 6 295 435 733 5.32e-18 85.1
MsG0680032772.01.T01 AT1G09170 26.537 309 198 11 6 295 435 733 5.32e-18 85.1
MsG0680032772.01.T01 AT5G65460 27.668 253 167 5 51 295 181 425 5.72e-18 85.5
MsG0680032772.01.T01 AT4G38950 25.000 312 207 10 4 299 12 312 6.06e-18 85.1
MsG0680032772.01.T01 AT4G38950 25.000 312 207 10 4 299 12 312 6.06e-18 85.1
MsG0680032772.01.T01 AT4G38950 25.000 312 207 10 4 299 12 312 6.06e-18 85.1
MsG0680032772.01.T01 AT4G38950 25.000 312 207 10 4 299 12 312 6.06e-18 85.1
MsG0680032772.01.T01 AT4G38950 25.000 312 207 10 4 299 12 312 6.06e-18 85.1
MsG0680032772.01.T01 AT1G09170 27.331 311 193 13 6 295 435 733 7.60e-18 84.7
MsG0680032772.01.T01 AT3G43210 26.394 269 183 6 38 295 57 321 9.12e-18 84.7
MsG0680032772.01.T01 AT3G43210 26.394 269 183 6 38 295 57 321 9.12e-18 84.7
MsG0680032772.01.T01 AT3G43210 26.394 269 183 6 38 295 57 321 9.12e-18 84.7
MsG0680032772.01.T01 AT3G43210 26.394 269 183 6 38 295 57 321 9.12e-18 84.7
MsG0680032772.01.T01 AT3G43210 26.394 269 183 6 38 295 57 321 9.12e-18 84.7
MsG0680032772.01.T01 AT1G63640 25.449 334 210 11 6 319 473 787 1.15e-17 84.3
MsG0680032772.01.T01 AT4G14150 28.028 289 172 12 47 303 122 406 1.28e-17 84.3
MsG0680032772.01.T01 AT3G19050 28.727 275 164 13 49 295 233 503 1.57e-17 84.3
MsG0680032772.01.T01 AT1G63640 25.519 337 213 11 6 319 463 784 1.93e-17 83.6
MsG0680032772.01.T01 AT1G63640 25.519 337 213 11 6 319 473 794 2.39e-17 83.6
MsG0680032772.01.T01 AT1G63640 25.519 337 213 11 6 319 473 794 2.43e-17 83.6
MsG0680032772.01.T01 AT1G63640 25.519 337 213 11 6 319 473 794 2.43e-17 83.6
MsG0680032772.01.T01 AT1G09170 27.331 311 193 13 6 295 435 733 2.93e-17 83.2
MsG0680032772.01.T01 AT5G41310 26.235 324 207 12 6 318 423 725 3.03e-17 83.2
MsG0680032772.01.T01 AT4G05190 28.571 252 152 5 70 295 480 729 3.47e-17 82.8
MsG0680032772.01.T01 AT4G21270 25.651 269 175 6 51 295 478 745 3.63e-17 82.8
MsG0680032772.01.T01 AT1G59540 28.947 266 171 9 47 300 40 299 4.04e-17 82.8
MsG0680032772.01.T01 AT1G09170 27.000 300 172 11 6 295 435 697 4.09e-17 82.8
MsG0680032772.01.T01 AT4G05190 28.571 252 152 5 70 295 493 742 5.01e-17 82.4
MsG0680032772.01.T01 AT3G23670 29.658 263 149 12 73 303 153 411 1.70e-16 80.9
MsG0680032772.01.T01 AT3G51150 24.516 310 213 9 4 299 16 318 1.95e-16 80.9
MsG0680032772.01.T01 AT3G51150 24.516 310 213 9 4 299 16 318 2.10e-16 80.5
MsG0680032772.01.T01 AT3G51150 24.516 310 213 9 4 299 16 318 2.10e-16 80.5
MsG0680032772.01.T01 AT3G51150 24.516 310 213 9 4 299 16 318 2.10e-16 80.5
MsG0680032772.01.T01 AT3G23670 29.658 263 149 12 73 303 153 411 2.13e-16 80.5
MsG0680032772.01.T01 AT5G65460 27.308 260 166 6 51 295 181 432 2.64e-16 80.5
MsG0680032772.01.T01 AT1G09170 27.063 303 188 13 6 287 435 725 6.63e-16 79.0
MsG0680032772.01.T01 AT1G09170 27.063 303 188 13 6 287 435 725 6.63e-16 79.0
MsG0680032772.01.T01 AT4G24170 25.890 309 202 12 2 295 3 299 1.62e-15 77.8
MsG0680032772.01.T01 AT4G24170 25.890 309 202 12 2 295 3 299 1.62e-15 77.8
MsG0680032772.01.T01 AT5G54670 29.150 247 153 7 70 295 461 706 1.96e-15 77.4
MsG0680032772.01.T01 AT5G54670 29.150 247 153 7 70 295 461 706 1.96e-15 77.4
MsG0680032772.01.T01 AT5G54670 29.150 247 153 7 70 295 401 646 2.11e-15 77.4
MsG0680032772.01.T01 AT1G18370 25.397 315 202 11 4 299 30 330 5.98e-15 76.3
MsG0680032772.01.T01 AT5G10470 26.877 253 169 9 51 295 185 429 7.82e-14 72.8
MsG0680032772.01.T01 AT5G10470 26.877 253 169 9 51 295 185 429 7.97e-14 72.8
MsG0680032772.01.T01 AT1G01950 28.992 238 136 8 87 295 1 234 1.17e-13 72.0
MsG0680032772.01.T01 AT4G27180 29.032 248 152 9 70 295 452 697 1.20e-13 72.0
MsG0680032772.01.T01 AT4G27180 29.032 248 152 9 70 295 452 697 1.20e-13 72.0
MsG0680032772.01.T01 AT5G27950 26.415 212 139 4 100 295 1 211 1.77e-11 65.1
MsG0680032772.01.T01 AT3G50240 42.169 83 43 1 222 299 173 255 3.01e-11 65.1

Find 56 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCATTCATGCTTTCATTT+TGG 0.083734 6:-49422579 None:intergenic
CCTAGAAGATTGTTCTTTAA+AGG 0.102473 6:-49420805 None:intergenic
TCCAGAACAACCACATATTT+TGG 0.199476 6:+49422287 MsG0680032772.01.T01:CDS
ATCAGAAAAGCCGCGAATTT+TGG 0.254972 6:-49420709 None:intergenic
CCTTTAAAGAACAATCTTCT+AGG 0.274890 6:+49420805 MsG0680032772.01.T01:CDS
GTTGTTCTGAAAGGGCTCTT+TGG 0.315176 6:+49422140 MsG0680032772.01.T01:intron
CCTGACTGAGTCCTTTAAAC+TGG 0.329209 6:-49422332 None:intergenic
ATGAAAGCCGTGTTCCCTTC+CGG 0.330850 6:+49422855 MsG0680032772.01.T01:CDS
CTCTTTGGAGAGTCCGGGTT+TGG 0.333423 6:+49422155 MsG0680032772.01.T01:CDS
TCTGTGAAGACTCAAGATTC+TGG 0.335886 6:+49420768 MsG0680032772.01.T01:CDS
CACGGAAGAATCCAGTTTAA+AGG 0.344771 6:+49422321 MsG0680032772.01.T01:CDS
TGAAAGCCGTGTTCCCTTCC+GGG 0.346745 6:+49422856 MsG0680032772.01.T01:CDS
TGCGTGTAAGTTTACTTTCC+CGG 0.358026 6:-49422874 None:intergenic
CGCCTTACTGAATGTTTGTC+AGG 0.366880 6:+49422820 MsG0680032772.01.T01:CDS
AAAGGGCTCTTTGGAGAGTC+CGG 0.395682 6:+49422149 MsG0680032772.01.T01:intron
TTTCTACGAGGTTGATCATC+AGG 0.400292 6:+49422242 MsG0680032772.01.T01:CDS
AACAGTACTGTTATTGCTCA+TGG 0.404603 6:+49421975 MsG0680032772.01.T01:CDS
GGAAGTGAAGCCTCTTGTTT+CGG 0.405631 6:+49421935 MsG0680032772.01.T01:CDS
ACCAAAATATGTGGTTGTTC+TGG 0.408493 6:-49422288 None:intergenic
TAAACTTACACGCATATTGC+AGG 0.409523 6:+49422883 MsG0680032772.01.T01:CDS
AAAATTCAAGAACTGTGGAT+TGG 0.411519 6:+49420742 MsG0680032772.01.T01:CDS
AACTCAGAAATGGATTTAAC+AGG 0.413773 6:-49422451 None:intergenic
TAAATTCTGGAACTCAGAAA+TGG 0.423566 6:-49422461 None:intergenic
AAATTCAAGAACTGTGGATT+GGG 0.423587 6:+49420743 MsG0680032772.01.T01:CDS
CGCTGCATGTTCTGCAAACA+AGG 0.425802 6:+49422489 MsG0680032772.01.T01:CDS
TCCCAAAATGAAAGCATGAA+TGG 0.431040 6:+49422577 MsG0680032772.01.T01:CDS
GAGTCCGGGTTTGGCAGCGC+TGG 0.448017 6:+49422164 MsG0680032772.01.T01:CDS
ATGCAGCGATGTATAAATTC+TGG 0.458838 6:-49422474 None:intergenic
CCAGTTTAAAGGACTCAGTC+AGG 0.500631 6:+49422332 MsG0680032772.01.T01:CDS
TACGTCTGAGTTTCTCTCCA+TGG 0.503109 6:+49422188 MsG0680032772.01.T01:CDS
ATAATGAAATGATCTATTCA+AGG 0.507697 6:+49421913 MsG0680032772.01.T01:CDS
CATATTGCAGGACTCCTTGA+GGG 0.518295 6:+49422895 MsG0680032772.01.T01:CDS
AAGGGCTCTTTGGAGAGTCC+GGG 0.524720 6:+49422150 MsG0680032772.01.T01:intron
CAGGTTACGAAGATGCTAGA+AGG 0.533980 6:+49422741 MsG0680032772.01.T01:intron
CGCGTCGTAGCCAAAATTCG+CGG 0.543857 6:+49420699 MsG0680032772.01.T01:CDS
GCTCATGGAGCTAGAGGCAG+TGG 0.548084 6:+49421990 MsG0680032772.01.T01:CDS
TACTTTCCCGGAAGGGAACA+CGG 0.554357 6:-49422862 None:intergenic
CGCCTGACAAACATTCAGTA+AGG 0.557288 6:-49422822 None:intergenic
GTAGCCAGCGCTGCCAAACC+CGG 0.574308 6:-49422168 None:intergenic
TGTAAGTTTACTTTCCCGGA+AGG 0.585542 6:-49422870 None:intergenic
GTTATTGCTCATGGAGCTAG+AGG 0.588227 6:+49421984 MsG0680032772.01.T01:CDS
TCTTCAAGCACCAAAATATG+TGG 0.588936 6:-49422297 None:intergenic
GTAAGTTTACTTTCCCGGAA+GGG 0.591065 6:-49422869 None:intergenic
AGGAAAAGTAGTGATGCCTC+TGG 0.592724 6:+49422761 MsG0680032772.01.T01:CDS
GCATATTGCAGGACTCCTTG+AGG 0.599869 6:+49422894 MsG0680032772.01.T01:CDS
TAATGAAATGATCTATTCAA+GGG 0.601074 6:+49421914 MsG0680032772.01.T01:CDS
TACTGAAAATTCAAGAACTG+TGG 0.614039 6:+49420737 MsG0680032772.01.T01:CDS
GTTATTCTCAACATGACCAG+AGG 0.618655 6:-49422777 None:intergenic
GCGTGCTCATAGAAGCCACA+TGG 0.618874 6:+49422534 MsG0680032772.01.T01:CDS
AACTTTGCTAGTTCCCCTCA+AGG 0.619759 6:-49422909 None:intergenic
GATTTAATAAATCGACAGCA+TGG 0.620401 6:-49422266 None:intergenic
GTGGTGCAGTCGGTATTCAG+TGG 0.621455 6:+49421866 MsG0680032772.01.T01:intron
CGTGCTCATAGAAGCCACAT+GGG 0.665446 6:+49422535 MsG0680032772.01.T01:CDS
ATATTGCAGGACTCCTTGAG+GGG 0.674017 6:+49422896 MsG0680032772.01.T01:CDS
TATAGCAGTTTCTTTCTACG+AGG 0.697044 6:+49422230 MsG0680032772.01.T01:CDS
CATGCACAATCAAACCCATG+TGG 0.760510 6:-49422549 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTAATTTTTTTTGTTG+GGG + Chr6:49422068-49422087 MsG0680032772.01.T01:intron 10.0%
!! AAAGAATACAAATAATTTCA+TGG - Chr6:49421782-49421801 None:intergenic 15.0%
!!! ATATTAATTTTTTTTGTTGG+GGG + Chr6:49422069-49422088 MsG0680032772.01.T01:intron 15.0%
!! ATAATGAAATGATCTATTCA+AGG + Chr6:49421913-49421932 MsG0680032772.01.T01:CDS 20.0%
!! GAATGAGATATTATTGTAAT+TGG + Chr6:49421454-49421473 MsG0680032772.01.T01:intron 20.0%
!! TAATGAAATGATCTATTCAA+GGG + Chr6:49421914-49421933 MsG0680032772.01.T01:CDS 20.0%
!! TGATTTGAATTATGTGAAAT+TGG + Chr6:49421212-49421231 MsG0680032772.01.T01:intron 20.0%
!! TTGTAATTGGAAAAAAATTG+AGG + Chr6:49421467-49421486 MsG0680032772.01.T01:intron 20.0%
!! TTGTGAAATTGGAATAAATT+GGG + Chr6:49420892-49420911 MsG0680032772.01.T01:intron 20.0%
!! TTTGTGAAATTGGAATAAAT+TGG + Chr6:49420891-49420910 MsG0680032772.01.T01:intron 20.0%
!!! CTTAAACTCTCTTTTTTTTA+TGG - Chr6:49420956-49420975 None:intergenic 20.0%
!!! GTGATTTTCATAATTAGATA+TGG + Chr6:49421143-49421162 MsG0680032772.01.T01:intron 20.0%
!!! TGTGAAAATTTTGAGTTTTA+GGG + Chr6:49421096-49421115 MsG0680032772.01.T01:intron 20.0%
!!! TTAGTGAAATTTGAGTTTTA+GGG + Chr6:49421284-49421303 MsG0680032772.01.T01:intron 20.0%
!!! TTGATTGAATTTTGTGAAAT+TGG + Chr6:49420881-49420900 MsG0680032772.01.T01:intron 20.0%
!!! TTGTGAAAATTTTGAGTTTT+AGG + Chr6:49421095-49421114 MsG0680032772.01.T01:intron 20.0%
! ATTGGAAAAAAATTGAGGAA+TGG + Chr6:49421472-49421491 MsG0680032772.01.T01:intron 25.0%
! CAGGTAAAAATTATTGTAGT+TGG + Chr6:49422351-49422370 MsG0680032772.01.T01:intron 25.0%
! GAAATTGTAGTAACGATAAT+TGG + Chr6:49421065-49421084 MsG0680032772.01.T01:intron 25.0%
!! AACAATTATGTTGTTCTGAA+AGG + Chr6:49422131-49422150 MsG0680032772.01.T01:intron 25.0%
!! AGAAAATGTTTTTCACAAGA+AGG - Chr6:49422103-49422122 None:intergenic 25.0%
!! AGTATTGCACTTTTATTATC+AGG + Chr6:49422722-49422741 MsG0680032772.01.T01:intron 25.0%
!! AGTCTTAAATTTTGTGATGT+TGG + Chr6:49421514-49421533 MsG0680032772.01.T01:intron 25.0%
!! ATTAGTTAAATTTGAGTTCC+AGG + Chr6:49420993-49421012 MsG0680032772.01.T01:intron 25.0%
!! CAAAATGAATTTTGTGGATA+TGG + Chr6:49422609-49422628 MsG0680032772.01.T01:CDS 25.0%
!! TTAGTTAAATTTGAGTTCCA+GGG + Chr6:49420994-49421013 MsG0680032772.01.T01:intron 25.0%
!! TTTGTATTCTTTTCTTCTCT+TGG + Chr6:49421790-49421809 MsG0680032772.01.T01:intron 25.0%
!!! ACAATTATGTTGTTCTGAAA+GGG + Chr6:49422132-49422151 MsG0680032772.01.T01:intron 25.0%
!!! ATTGGGAAAATTTGAGTTTT+AGG + Chr6:49420909-49420928 MsG0680032772.01.T01:intron 25.0%
!!! CGCTATTATTATTTTTTTCC+TGG + Chr6:49422668-49422687 MsG0680032772.01.T01:intron 25.0%
!!! GTTAGTGAAATTTGAGTTTT+AGG + Chr6:49421283-49421302 MsG0680032772.01.T01:intron 25.0%
!!! TGTTGTTTTAAATAGGGTTA+CGG + Chr6:49421816-49421835 MsG0680032772.01.T01:intron 25.0%
!!! TTGGGAAAATTTGAGTTTTA+GGG + Chr6:49420910-49420929 MsG0680032772.01.T01:intron 25.0%
AAAAATTGAGGAATGGTAAC+TGG + Chr6:49421479-49421498 MsG0680032772.01.T01:intron 30.0%
AAAATTCAAGAACTGTGGAT+TGG + Chr6:49420742-49420761 MsG0680032772.01.T01:CDS 30.0%
AAAGAACAATCTTCTAGGTA+TGG + Chr6:49420810-49420829 MsG0680032772.01.T01:intron 30.0%
AAATTCAAGAACTGTGGATT+GGG + Chr6:49420743-49420762 MsG0680032772.01.T01:CDS 30.0%
AGTTTAAGCTTAGTGAAGTT+GGG + Chr6:49420968-49420987 MsG0680032772.01.T01:intron 30.0%
CATAGTGAAATTGAGTTTCA+GGG + Chr6:49421368-49421387 MsG0680032772.01.T01:intron 30.0%
CCTAGAAGATTGTTCTTTAA+AGG - Chr6:49420808-49420827 None:intergenic 30.0%
GAAACATCATGATGAAAACA+TGG - Chr6:49421684-49421703 None:intergenic 30.0%
GATTTAATAAATCGACAGCA+TGG - Chr6:49422269-49422288 None:intergenic 30.0%
TAAATACTTCAACAAAAGCC+AGG - Chr6:49422689-49422708 None:intergenic 30.0%
TACTGAAAATTCAAGAACTG+TGG + Chr6:49420737-49420756 MsG0680032772.01.T01:CDS 30.0%
TGAGTTAATGTTAATCCTTG+TGG + Chr6:49421847-49421866 MsG0680032772.01.T01:intron 30.0%
TGGAAAAACTCACTTAATTC+AGG + Chr6:49422010-49422029 MsG0680032772.01.T01:CDS 30.0%
TGTTTCAGCTTAGTGAAATT+GGG + Chr6:49421258-49421277 MsG0680032772.01.T01:intron 30.0%
! AACTCAGAAATGGATTTAAC+AGG - Chr6:49422454-49422473 None:intergenic 30.0%
! ACCATTCATGCTTTCATTTT+GGG - Chr6:49422581-49422600 None:intergenic 30.0%
! CCTTTAAAGAACAATCTTCT+AGG + Chr6:49420805-49420824 MsG0680032772.01.T01:CDS 30.0%
! GTAACCCTATTTAAAACAAC+AGG - Chr6:49421817-49421836 None:intergenic 30.0%
! GTTCGAATAGTTTTCTTGTA+GGG + Chr6:49421715-49421734 MsG0680032772.01.T01:intron 30.0%
! GTTCTTGAATTTTCAGTATC+TGG - Chr6:49420735-49420754 None:intergenic 30.0%
! TGTGAGCAAAATGAATTTTG+TGG + Chr6:49422603-49422622 MsG0680032772.01.T01:CDS 30.0%
!! TAAATTCTGGAACTCAGAAA+TGG - Chr6:49422464-49422483 None:intergenic 30.0%
!!! TGGACCTGTTGTTTTAAATA+GGG + Chr6:49421810-49421829 MsG0680032772.01.T01:intron 30.0%
!!! TTAATTTTTTTTGTTGGGGG+AGG + Chr6:49422072-49422091 MsG0680032772.01.T01:intron 30.0%
!!! TTGGACCTGTTGTTTTAAAT+AGG + Chr6:49421809-49421828 MsG0680032772.01.T01:intron 30.0%
AACAGTACTGTTATTGCTCA+TGG + Chr6:49421975-49421994 MsG0680032772.01.T01:CDS 35.0%
ACCAAAATATGTGGTTGTTC+TGG - Chr6:49422291-49422310 None:intergenic 35.0%
ATGCAGCGATGTATAAATTC+TGG - Chr6:49422477-49422496 None:intergenic 35.0%
CATGATGTTTCAGATCTTTC+AGG + Chr6:49421693-49421712 MsG0680032772.01.T01:intron 35.0%
GAGTTTAAGCTTAGTGAAGT+TGG + Chr6:49420967-49420986 MsG0680032772.01.T01:intron 35.0%
GCATAGTGAAATTGAGTTTC+AGG + Chr6:49421367-49421386 MsG0680032772.01.T01:intron 35.0%
GTGTTTCAGCTTAGTGAAAT+TGG + Chr6:49421257-49421276 MsG0680032772.01.T01:intron 35.0%
TAAACTTACACGCATATTGC+AGG + Chr6:49422883-49422902 MsG0680032772.01.T01:CDS 35.0%
TAGCGATAACTTGACATCTT+CGG - Chr6:49422653-49422672 None:intergenic 35.0%
TATAGCAGTTTCTTTCTACG+AGG + Chr6:49422230-49422249 MsG0680032772.01.T01:CDS 35.0%
TCTTCAAGCACCAAAATATG+TGG - Chr6:49422300-49422319 None:intergenic 35.0%
! ATGAATTTTGTGGATATGGC+AGG + Chr6:49422613-49422632 MsG0680032772.01.T01:CDS 35.0%
! GACCATTCATGCTTTCATTT+TGG - Chr6:49422582-49422601 None:intergenic 35.0%
! GGTTCGAATAGTTTTCTTGT+AGG + Chr6:49421714-49421733 MsG0680032772.01.T01:intron 35.0%
! TCCAGAACAACCACATATTT+TGG + Chr6:49422287-49422306 MsG0680032772.01.T01:CDS 35.0%
! TCCCAAAATGAAAGCATGAA+TGG + Chr6:49422577-49422596 MsG0680032772.01.T01:CDS 35.0%
!! TTTTCCATTTTTCTCAGCCA+TGG - Chr6:49422208-49422227 None:intergenic 35.0%
!!! ATTTTGGTGCTTGAAGATCA+CGG + Chr6:49422303-49422322 MsG0680032772.01.T01:CDS 35.0%
!!! GAGTTTCAGGGTTTTGAATT+AGG + Chr6:49421380-49421399 MsG0680032772.01.T01:intron 35.0%
ACTGCATAATTCACAAACCC+TGG - Chr6:49421014-49421033 None:intergenic 40.0%
AGGAATGGTAACTGGAAAGA+GGG + Chr6:49421487-49421506 MsG0680032772.01.T01:intron 40.0%
CACGGAAGAATCCAGTTTAA+AGG + Chr6:49422321-49422340 MsG0680032772.01.T01:CDS 40.0%
GTAAGTTTACTTTCCCGGAA+GGG - Chr6:49422872-49422891 None:intergenic 40.0%
GTTATTCTCAACATGACCAG+AGG - Chr6:49422780-49422799 None:intergenic 40.0%
TCAAAAACTGCCGAAACAAG+AGG - Chr6:49421948-49421967 None:intergenic 40.0%
TCTGTGAAGACTCAAGATTC+TGG + Chr6:49420768-49420787 MsG0680032772.01.T01:CDS 40.0%
TGCGTGTAAGTTTACTTTCC+CGG - Chr6:49422877-49422896 None:intergenic 40.0%
TGTAAGTTTACTTTCCCGGA+AGG - Chr6:49422873-49422892 None:intergenic 40.0%
! ATCAGAAAAGCCGCGAATTT+TGG - Chr6:49420712-49420731 None:intergenic 40.0%
! CTTGTTTCGGCAGTTTTTGA+AGG + Chr6:49421948-49421967 MsG0680032772.01.T01:CDS 40.0%
! TTTCTACGAGGTTGATCATC+AGG + Chr6:49422242-49422261 MsG0680032772.01.T01:CDS 40.0%
!! GGGAACTAGCAAAGTTTTGT+TGG + Chr6:49422916-49422935 MsG0680032772.01.T01:CDS 40.0%
!!! AGTTTTGTTGGCTTCATGCT+TGG + Chr6:49422928-49422947 MsG0680032772.01.T01:CDS 40.0%
AACAAGGCTGCACCCAAAAA+AGG + Chr6:49422505-49422524 MsG0680032772.01.T01:CDS 45.0%
AACTTTGCTAGTTCCCCTCA+AGG - Chr6:49422912-49422931 None:intergenic 45.0%
AGGAAAAGTAGTGATGCCTC+TGG + Chr6:49422761-49422780 MsG0680032772.01.T01:CDS 45.0%
ATATTGCAGGACTCCTTGAG+GGG + Chr6:49422896-49422915 MsG0680032772.01.T01:CDS 45.0%
CAGGTTACGAAGATGCTAGA+AGG + Chr6:49422741-49422760 MsG0680032772.01.T01:intron 45.0%
CATATTGCAGGACTCCTTGA+GGG + Chr6:49422895-49422914 MsG0680032772.01.T01:CDS 45.0%
CATGCACAATCAAACCCATG+TGG - Chr6:49422552-49422571 None:intergenic 45.0%
CCAGTTTAAAGGACTCAGTC+AGG + Chr6:49422332-49422351 MsG0680032772.01.T01:CDS 45.0%
CCTGACTGAGTCCTTTAAAC+TGG - Chr6:49422335-49422354 None:intergenic 45.0%
CGCCTGACAAACATTCAGTA+AGG - Chr6:49422825-49422844 None:intergenic 45.0%
CGCCTTACTGAATGTTTGTC+AGG + Chr6:49422820-49422839 MsG0680032772.01.T01:CDS 45.0%
CTCTCCATGGCTGAGAAAAA+TGG + Chr6:49422201-49422220 MsG0680032772.01.T01:CDS 45.0%
GAGGAATGGTAACTGGAAAG+AGG + Chr6:49421486-49421505 MsG0680032772.01.T01:intron 45.0%
GTTAATCCTTGTGGTGCAGT+CGG + Chr6:49421856-49421875 MsG0680032772.01.T01:intron 45.0%
GTTATTGCTCATGGAGCTAG+AGG + Chr6:49421984-49422003 MsG0680032772.01.T01:CDS 45.0%
TACGTCTGAGTTTCTCTCCA+TGG + Chr6:49422188-49422207 MsG0680032772.01.T01:CDS 45.0%
TTCTAAGCACAGTGTCTGTG+AGG + Chr6:49421580-49421599 MsG0680032772.01.T01:intron 45.0%
! GGAAGTGAAGCCTCTTGTTT+CGG + Chr6:49421935-49421954 MsG0680032772.01.T01:CDS 45.0%
! GTCGTTGCATTTTTGCTTGC+AGG + Chr6:49422426-49422445 MsG0680032772.01.T01:intron 45.0%
!! GTTGTTCTGAAAGGGCTCTT+TGG + Chr6:49422140-49422159 MsG0680032772.01.T01:intron 45.0%
!!! AGCACGCTCAATGCCTTTTT+TGG - Chr6:49422521-49422540 None:intergenic 45.0%
!!! GCACGCTCAATGCCTTTTTT+GGG - Chr6:49422520-49422539 None:intergenic 45.0%
!!! ATTATATTAATTTTTTTTGT+TGG + Chr6:49422066-49422085 MsG0680032772.01.T01:intron 5.0%
!!! TTATATTAATTTTTTTTGTT+GGG + Chr6:49422067-49422086 MsG0680032772.01.T01:intron 5.0%
ATGAAAGCCGTGTTCCCTTC+CGG + Chr6:49422855-49422874 MsG0680032772.01.T01:CDS 50.0%
CGCTGCATGTTCTGCAAACA+AGG + Chr6:49422489-49422508 MsG0680032772.01.T01:CDS 50.0%
CGTGCTCATAGAAGCCACAT+GGG + Chr6:49422535-49422554 MsG0680032772.01.T01:CDS 50.0%
CTTGACATCTTCGGTTGAGC+AGG - Chr6:49422644-49422663 None:intergenic 50.0%
GCATATTGCAGGACTCCTTG+AGG + Chr6:49422894-49422913 MsG0680032772.01.T01:CDS 50.0%
TACTTTCCCGGAAGGGAACA+CGG - Chr6:49422865-49422884 None:intergenic 50.0%
! AAAGGGCTCTTTGGAGAGTC+CGG + Chr6:49422149-49422168 MsG0680032772.01.T01:intron 50.0%
! TGAATACCGACTGCACCACA+AGG - Chr6:49421865-49421884 None:intergenic 50.0%
CGCGTCGTAGCCAAAATTCG+CGG + Chr6:49420699-49420718 MsG0680032772.01.T01:CDS 55.0%
GCGTGCTCATAGAAGCCACA+TGG + Chr6:49422534-49422553 MsG0680032772.01.T01:CDS 55.0%
GTGGTGCAGTCGGTATTCAG+TGG + Chr6:49421866-49421885 MsG0680032772.01.T01:intron 55.0%
TGAAAGCCGTGTTCCCTTCC+GGG + Chr6:49422856-49422875 MsG0680032772.01.T01:CDS 55.0%
! AAGGGCTCTTTGGAGAGTCC+GGG + Chr6:49422150-49422169 MsG0680032772.01.T01:intron 55.0%
! CTCTTTGGAGAGTCCGGGTT+TGG + Chr6:49422155-49422174 MsG0680032772.01.T01:CDS 55.0%
GCTCATGGAGCTAGAGGCAG+TGG + Chr6:49421990-49422009 MsG0680032772.01.T01:CDS 60.0%
GTAGCCAGCGCTGCCAAACC+CGG - Chr6:49422171-49422190 None:intergenic 65.0%
GAGTCCGGGTTTGGCAGCGC+TGG + Chr6:49422164-49422183 MsG0680032772.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 49420681 49423021 49420681 ID=MsG0680032772.01;Name=MsG0680032772.01
Chr6 mRNA 49420681 49423021 49420681 ID=MsG0680032772.01.T01;Parent=MsG0680032772.01;Name=MsG0680032772.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.5|0.2|1|1|1|5|0|322
Chr6 exon 49420681 49420826 49420681 ID=MsG0680032772.01.T01:exon:13966;Parent=MsG0680032772.01.T01
Chr6 exon 49421875 49422031 49421875 ID=MsG0680032772.01.T01:exon:13965;Parent=MsG0680032772.01.T01
Chr6 exon 49422153 49422353 49422153 ID=MsG0680032772.01.T01:exon:13964;Parent=MsG0680032772.01.T01
Chr6 exon 49422448 49422634 49422448 ID=MsG0680032772.01.T01:exon:13963;Parent=MsG0680032772.01.T01
Chr6 exon 49422744 49423021 49422744 ID=MsG0680032772.01.T01:exon:13962;Parent=MsG0680032772.01.T01
Chr6 CDS 49420681 49420826 49420681 ID=MsG0680032772.01.T01:cds;Parent=MsG0680032772.01.T01
Chr6 CDS 49421875 49422031 49421875 ID=MsG0680032772.01.T01:cds;Parent=MsG0680032772.01.T01
Chr6 CDS 49422153 49422353 49422153 ID=MsG0680032772.01.T01:cds;Parent=MsG0680032772.01.T01
Chr6 CDS 49422448 49422634 49422448 ID=MsG0680032772.01.T01:cds;Parent=MsG0680032772.01.T01
Chr6 CDS 49422744 49423021 49422744 ID=MsG0680032772.01.T01:cds;Parent=MsG0680032772.01.T01
Gene Sequence

>MsG0680032772.01.T01

ATGGCATCAAAGAAGGTTCGCGTCGTAGCCAAAATTCGCGGCTTTTCTGATCCAGATACTGAAAATTCAAGAACTGTGGATTGGGTTTCTGTGAAGACTCAAGATTCTGGAGATGTTACTATCTCCTTTAAAGAACAATCTTCTAGTCGGTATTCAGTGGACTATTGCTATAACGAACATGATGATAATGAAATGATCTATTCAAGGGAAGTGAAGCCTCTTGTTTCGGCAGTTTTTGAAGGTTTTAACAGTACTGTTATTGCTCATGGAGCTAGAGGCAGTGGAAAAACTCACTTAATTCAGGGCTCTTTGGAGAGTCCGGGTTTGGCAGCGCTGGCTACGTCTGAGTTTCTCTCCATGGCTGAGAAAAATGGAAAATCTATAGCAGTTTCTTTCTACGAGGTTGATCATCAGGACCATGCTGTCGATTTATTAAATCCAGAACAACCACATATTTTGGTGCTTGAAGATCACGGAAGAATCCAGTTTAAAGGACTCAGTCAGGCTCCTGTTAAATCCATTTCTGAGTTCCAGAATTTATACATCGCTGCATGTTCTGCAAACAAGGCTGCACCCAAAAAAGGCATTGAGCGTGCTCATAGAAGCCACATGGGTTTGATTGTGCATGTCTTTTCCCAAAATGAAAGCATGAATGGTCTTGTGAGCAAAATGAATTTTGTGGATATGGCAGGTTACGAAGATGCTAGAAGGAAAAGTAGTGATGCCTCTGGTCATGTTGAGAATAACAAACTTAACAAGTCAATTTACGCCTTACTGAATGTTTGTCAGGCGTTGAGTACAAATGAAAGCCGTGTTCCCTTCCGGGAAAGTAAACTTACACGCATATTGCAGGACTCCTTGAGGGGAACTAGCAAAGTTTTGTTGGCTTCATGCTTGGTACGTGACTCTGATTTCTTGTTCAAATATATATTTTATATCTTCATTTTGCAATTCGTTATTAAATTTTAA

Protein sequence

>MsG0680032772.01.T01

MASKKVRVVAKIRGFSDPDTENSRTVDWVSVKTQDSGDVTISFKEQSSSRYSVDYCYNEHDDNEMIYSREVKPLVSAVFEGFNSTVIAHGARGSGKTHLIQGSLESPGLAALATSEFLSMAEKNGKSIAVSFYEVDHQDHAVDLLNPEQPHILVLEDHGRIQFKGLSQAPVKSISEFQNLYIAACSANKAAPKKGIERAHRSHMGLIVHVFSQNESMNGLVSKMNFVDMAGYEDARRKSSDASGHVENNKLNKSIYALLNVCQALSTNESRVPFRESKLTRILQDSLRGTSKVLLASCLVRDSDFLFKYIFYIFILQFVIKF*