AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021587.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021587.01.T01 MTR_1g098970 52.128 470 110 11 8 372 188 647 1.10e-133 405
MsG0480021587.01.T01 MTR_1g099000 53.333 480 107 12 5 378 699 1167 3.10e-129 405
MsG0480021587.01.T01 MTR_4g006320 49.873 395 123 9 3 338 15 393 3.71e-110 330
MsG0480021587.01.T01 MTR_4g005290 51.366 366 121 11 19 359 6 339 2.08e-98 301
MsG0480021587.01.T01 MTR_7g102950 40.426 329 118 10 52 310 38 358 5.46e-56 191
MsG0480021587.01.T01 MTR_7g101830 38.769 325 121 11 52 308 57 371 3.06e-51 178
MsG0480021587.01.T01 MTR_7g102950 38.889 288 98 10 52 269 38 317 1.50e-37 140
MsG0480021587.01.T01 MTR_4g011840 39.524 210 74 5 38 201 1 203 1.17e-33 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021587.01.T01 AT1G76720 51.064 423 104 10 49 378 624 1036 5.06e-115 364
MsG0480021587.01.T01 AT1G76720 51.064 423 104 10 49 378 657 1069 1.10e-114 364
MsG0480021587.01.T01 AT1G76810 46.581 468 137 10 14 378 665 1122 5.63e-112 358
MsG0480021587.01.T01 AT1G21160 44.573 433 128 11 48 378 492 914 5.05e-99 320
MsG0480021587.01.T01 AT2G27700 44.469 452 137 11 32 378 12 454 3.29e-98 303
MsG0480021587.01.T01 AT2G27700 44.248 452 137 11 32 378 12 453 8.81e-97 299

Find 98 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACTTGAACACGCTATTTC+TGG 0.155512 4:-60262159 MsG0480021587.01.T01:CDS
ATGTTGTGATATTGCAATTT+TGG 0.224570 4:-60264100 MsG0480021587.01.T01:intron
ATTTCTCAATCATGGTCTTT+TGG 0.236666 4:+60263088 None:intergenic
CTCAGCACCTTGTTGAATAT+TGG 0.241938 4:+60264197 None:intergenic
TAGCTCATTGGAAGCATTAC+TGG 0.256266 4:-60262004 MsG0480021587.01.T01:CDS
CACAGTTCTTACAACTTTGC+AGG 0.290865 4:-60263804 MsG0480021587.01.T01:CDS
CATTCAATAACTCCCATTCT+TGG 0.303659 4:-60264137 MsG0480021587.01.T01:CDS
TTCTGGCGCTAGTCTATATA+TGG 0.338960 4:-60262142 MsG0480021587.01.T01:CDS
TTAACACAAAGTTCCTTCAT+TGG 0.348516 4:+60262714 None:intergenic
ATTCAATAACTCCCATTCTT+GGG 0.354056 4:-60264136 MsG0480021587.01.T01:CDS
TTCATCACTGCTTCACGAAT+TGG 0.359652 4:+60263743 None:intergenic
GCTTCACGAATTGGAGCATT+AGG 0.362737 4:+60263752 None:intergenic
CGATACTGCTAAACAGGTTT+GGG 0.369110 4:-60259953 MsG0480021587.01.T01:CDS
TATTATTTAAACAAATCAAT+AGG 0.372750 4:-60263533 MsG0480021587.01.T01:CDS
AAGCACAAGCTCATGAAATT+AGG 0.377051 4:-60259831 MsG0480021587.01.T01:CDS
TGCTTTCTATCTTCAGCCAC+AGG 0.379616 4:+60264372 None:intergenic
ACGATACTGCTAAACAGGTT+TGG 0.389825 4:-60259954 MsG0480021587.01.T01:CDS
ACTCTACGATACTGCTAAAC+AGG 0.393313 4:-60259959 MsG0480021587.01.T01:CDS
GGTGAAGCCTGATGATGATT+TGG 0.394558 4:-60262121 MsG0480021587.01.T01:CDS
TATTGCTCAGTTCAAGTCTC+AGG 0.396407 4:-60263573 MsG0480021587.01.T01:CDS
GCTCGAATTGTGGTAACAAT+TGG 0.397760 4:+60262753 None:intergenic
TTACCTAGCATGTAGCAAAT+TGG 0.398483 4:+60264264 None:intergenic
CTAACAGGAATATTCACTTC+TGG 0.399897 4:+60261967 None:intergenic
ACAGGAGTATGCTACTATAT+TGG 0.407838 4:-60261879 MsG0480021587.01.T01:intron
TTGTGCCAACAGGTGCAATA+AGG 0.411898 4:-60263496 MsG0480021587.01.T01:intron
ACATATTCCAAATCATCATC+AGG 0.412129 4:+60262114 None:intergenic
GGCATCTACACCTAGCTCAT+TGG 0.414459 4:-60262016 MsG0480021587.01.T01:CDS
AATGAAGGAACTTTGTGTTA+AGG 0.418973 4:-60262712 MsG0480021587.01.T01:intron
AATGGGAGTTATTGAATGAT+TGG 0.434627 4:+60264142 None:intergenic
CTGCAAGTTGGCTAGCTTCA+AGG 0.434845 4:+60261838 None:intergenic
GTCCTCAACCACAACAACTT+TGG 0.446904 4:+60264347 None:intergenic
TCATCATCACTCCGCTTAGA+TGG 0.450592 4:+60264294 None:intergenic
GGCCAAAGTTGTTGTGGTTG+AGG 0.453355 4:-60264349 MsG0480021587.01.T01:CDS
TATAAGTAATTTCTCAATCA+TGG 0.461480 4:+60263080 None:intergenic
GACAACAGAAATAACATGTC+CGG 0.469634 4:+60263120 None:intergenic
TTGCAAGTCAAGGTTATTGA+AGG 0.478444 4:-60262932 MsG0480021587.01.T01:CDS
AAGTATTATAGTGAAGAAGT+TGG 0.483324 4:-60259916 MsG0480021587.01.T01:CDS
ACATTCAGCATTGTGCCAAC+AGG 0.483959 4:-60263506 MsG0480021587.01.T01:CDS
GTTAATGGTGTTCTACATGA+AGG 0.485509 4:-60262881 MsG0480021587.01.T01:CDS
GTCAAGGTTATTGAAGGCTA+TGG 0.489864 4:-60262926 MsG0480021587.01.T01:CDS
ATGAGCTAGGTGTAGATGCC+TGG 0.492758 4:+60262019 None:intergenic
ATTTGATATTTCAGTGGTGA+AGG 0.501007 4:-60263147 MsG0480021587.01.T01:intron
TGGTGATGGCGTTTATGTCC+AGG 0.505358 4:-60262037 MsG0480021587.01.T01:CDS
TAGCCAACTTGCAGATGACC+TGG 0.507809 4:-60261829 MsG0480021587.01.T01:CDS
TACTTATAGTGAAGACATGC+AGG 0.511296 4:-60263065 MsG0480021587.01.T01:intron
TTCAATAACTCCCATTCTTG+GGG 0.516062 4:-60264135 MsG0480021587.01.T01:CDS
TAGAGCTGAACCCCAAGAAT+GGG 0.517077 4:+60264125 None:intergenic
CAAAGTTCCTTCATTGGATG+AGG 0.519140 4:+60262720 None:intergenic
TCGAATACGATCTAGAAGCT+TGG 0.522606 4:+60264224 None:intergenic
ATTGACACCTCATCCAATGA+AGG 0.523422 4:-60262727 MsG0480021587.01.T01:CDS
ATAGAGCTGAACCCCAAGAA+TGG 0.530896 4:+60264124 None:intergenic
AGACTTAGCTGTTATTCCAC+TGG 0.531590 4:-60262974 MsG0480021587.01.T01:intron
TGTTATTTCTGTTGTCTCAG+TGG 0.536508 4:-60263113 MsG0480021587.01.T01:CDS
ATGGCCCAGCAGACATGAGT+TGG 0.541272 4:+60264313 None:intergenic
TTACCAATTTGCTACATGCT+AGG 0.543273 4:-60264267 MsG0480021587.01.T01:CDS
ATTTACCTTATTGCACCTGT+TGG 0.546120 4:+60263491 None:intergenic
GATGTGGAGTTATTCTTGAG+AGG 0.548290 4:-60262072 MsG0480021587.01.T01:CDS
GCTTTCTATCTTCAGCCACA+GGG 0.549214 4:+60264373 None:intergenic
GGGCATCAAGATCATTGCCC+AGG 0.550099 4:-60262303 MsG0480021587.01.T01:intron
AAAACCAACTCATGTCTGCT+GGG 0.552708 4:-60264317 MsG0480021587.01.T01:CDS
TTAGCTGTTATTCCACTGGC+GGG 0.553853 4:-60262970 MsG0480021587.01.T01:intron
ATGTGGAGTTATTCTTGAGA+GGG 0.554543 4:-60262071 MsG0480021587.01.T01:CDS
AAAAGCGGCCTTCGAAGATG+TGG 0.554660 4:-60262088 MsG0480021587.01.T01:CDS
ATTGCTCAGTTCAAGTCTCA+GGG 0.557151 4:-60263572 MsG0480021587.01.T01:CDS
GCTCACAAAATTGTGGCTGA+AGG 0.564251 4:-60259802 MsG0480021587.01.T01:CDS
AGTAATGCTTCCAATGAGCT+AGG 0.564410 4:+60262006 None:intergenic
TCTATCTTCAGCCACAGGGT+TGG 0.566996 4:+60264377 None:intergenic
ACAACAGAAATAACATGTCC+GGG 0.568971 4:+60263121 None:intergenic
CAAAGAAATCAAAGCTGTGA+GGG 0.570214 4:-60262324 MsG0480021587.01.T01:CDS
TTTCAGTGGTGAAGGAATCC+CGG 0.575451 4:-60263139 MsG0480021587.01.T01:intron
AGTTCTTACAACTTTGCAGG+TGG 0.575995 4:-60263801 MsG0480021587.01.T01:CDS
CACCCAGGTCATCTGCAAGT+TGG 0.579767 4:+60261826 None:intergenic
GAAGATAGCTCACAAAATTG+TGG 0.583688 4:-60259809 MsG0480021587.01.T01:CDS
AAAGCAGGCCAAAGTTGTTG+TGG 0.584453 4:-60264355 MsG0480021587.01.T01:CDS
GGGATCGACAGTAGTGGTGA+TGG 0.584966 4:-60262051 MsG0480021587.01.T01:CDS
GGGAGTTATTGAATGATTGG+TGG 0.598923 4:+60264145 None:intergenic
AGTACACTGGTCCCCGCCAG+TGG 0.600172 4:+60262958 None:intergenic
TGTGGCTGAAGATAGAAAGC+AGG 0.600172 4:-60264370 MsG0480021587.01.T01:CDS
CTTAGCTGTTATTCCACTGG+CGG 0.606468 4:-60262971 MsG0480021587.01.T01:intron
CAATATTCAACAAGGTGCTG+AGG 0.616143 4:-60264196 MsG0480021587.01.T01:CDS
CGAGAAACCAATATTCAACA+AGG 0.617328 4:-60264204 MsG0480021587.01.T01:CDS
GAATAACTCCACATCTTCGA+AGG 0.618972 4:+60262080 None:intergenic
GAGGCTCTGGTCATGACGAA+AGG 0.625185 4:-60264528 None:intergenic
TGTCAATAAAGCTCGAATTG+TGG 0.631490 4:+60262743 None:intergenic
AGAACTGTGTGACAAAATTG+AGG 0.635460 4:+60263818 None:intergenic
AGCCAACTTGCAGATGACCT+GGG 0.639297 4:-60261828 MsG0480021587.01.T01:CDS
ATGCTAGGTAATTTCTACAC+TGG 0.643265 4:-60264252 MsG0480021587.01.T01:CDS
TTGAGAGGGATCGACAGTAG+TGG 0.645635 4:-60262057 MsG0480021587.01.T01:CDS
TGACTTGCAAAACAGTACAC+TGG 0.655641 4:+60262945 None:intergenic
AATGACTGATGACAAATCTG+TGG 0.658895 4:-60259854 MsG0480021587.01.T01:CDS
AAAGAAATCAAAGCTGTGAG+GGG 0.659897 4:-60262323 MsG0480021587.01.T01:CDS
AGGTGGATATGATTCCTCGC+TGG 0.668513 4:-60263784 MsG0480021587.01.T01:CDS
TGTCTGCTGGGCCATCTAAG+CGG 0.669760 4:-60264305 MsG0480021587.01.T01:CDS
TAGCTGTTATTCCACTGGCG+GGG 0.673890 4:-60262969 MsG0480021587.01.T01:CDS
TTAGGACATGCTTTCCAGCG+AGG 0.675961 4:+60263770 None:intergenic
ACAAAGAAATCAAAGCTGTG+AGG 0.694513 4:-60262325 MsG0480021587.01.T01:CDS
TTGCTCAGTTCAAGTCTCAG+GGG 0.697871 4:-60263571 MsG0480021587.01.T01:CDS
AGGTGCTATTTCCAACCCTG+TGG 0.700696 4:-60264388 MsG0480021587.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAATAAACTTTATAATTT+AGG - Chr4:60261533-60261552 MsG0480021587.01.T01:intron 10.0%
!! ATAATTATGTTATCTTTATT+AGG - Chr4:60262831-60262850 MsG0480021587.01.T01:intron 10.0%
!! CTAATAAACTTTATAATTTA+GGG - Chr4:60261534-60261553 MsG0480021587.01.T01:intron 10.0%
!! TATTATTTAAACAAATCAAT+AGG - Chr4:60260778-60260797 MsG0480021587.01.T01:intron 10.0%
!! TTAAATATTATGTGAAAATA+AGG + Chr4:60261276-60261295 None:intergenic 10.0%
!!! GTATTGATATATATTTTTTT+AGG - Chr4:60263373-60263392 MsG0480021587.01.T01:intron 10.0%
!!! GTATTGATATATTTTATTAT+TGG - Chr4:60263399-60263418 MsG0480021587.01.T01:intron 10.0%
!! AAAATCAAGAAAAACATAAT+TGG + Chr4:60262074-60262093 None:intergenic 15.0%
!! TTTAATATTTGATATTTCAG+TGG - Chr4:60261158-60261177 MsG0480021587.01.T01:intron 15.0%
!!! AAAATATTTTAGCAAAACTT+CGG + Chr4:60263479-60263498 None:intergenic 15.0%
!!! GTATACAATCAATTATATTT+TGG - Chr4:60263544-60263563 MsG0480021587.01.T01:CDS 15.0%
!! AACTAATATTTGAGAAACTT+TGG + Chr4:60263679-60263698 None:intergenic 20.0%
!! AATAAAAGTAATATCAACCT+AGG + Chr4:60261747-60261766 None:intergenic 20.0%
!! ACTAATATTTGAGAAACTTT+GGG + Chr4:60263678-60263697 None:intergenic 20.0%
!! ATAAAAGTAATATCAACCTA+GGG + Chr4:60261746-60261765 None:intergenic 20.0%
!! ATTAAATTCATATGCATAGT+AGG + Chr4:60262892-60262911 None:intergenic 20.0%
!! TACACACAAATTCTTATATT+GGG - Chr4:60263198-60263217 MsG0480021587.01.T01:intron 20.0%
!! TATAAGTAATTTCTCAATCA+TGG + Chr4:60261234-60261253 None:intergenic 20.0%
!! TTATAAAGTTTATTAGTTCG+AGG + Chr4:60261530-60261549 None:intergenic 20.0%
!! TTTAGTAGTGTTATATAGTA+GGG - Chr4:60263277-60263296 MsG0480021587.01.T01:intron 20.0%
!!! AAAAAACACATAATGGAATT+TGG + Chr4:60260466-60260485 None:intergenic 20.0%
!!! ATTGATGTTGTTTTAGTTAA+TGG - Chr4:60261415-60261434 MsG0480021587.01.T01:intron 20.0%
!!! ATTTTGGAATGAAATCTATT+TGG - Chr4:60263560-60263579 MsG0480021587.01.T01:CDS 20.0%
!!! ATTTTTCTTAACTACGAAAA+AGG - Chr4:60264202-60264221 MsG0480021587.01.T01:CDS 20.0%
!!! CGAATTTACAGAATATTTTT+CGG + Chr4:60263749-60263768 None:intergenic 20.0%
!!! GAACTTTATAGATTTTTTGT+TGG - Chr4:60263140-60263159 MsG0480021587.01.T01:intron 20.0%
!!! TGATATTACTTTTATTGATC+CGG - Chr4:60261751-60261770 MsG0480021587.01.T01:intron 20.0%
!!! TTGTTGTTTAACATCAATAA+TGG + Chr4:60259842-60259861 None:intergenic 20.0%
!!! TTGTTTGGTTTAATATGTAT+GGG - Chr4:60260907-60260926 MsG0480021587.01.T01:intron 20.0%
!!! TTTGGAATATGTTAAAAAAG+CGG - Chr4:60262208-60262227 MsG0480021587.01.T01:intron 20.0%
!!! TTTGTTTGGTTTAATATGTA+TGG - Chr4:60260906-60260925 MsG0480021587.01.T01:intron 20.0%
!!! TTTTAGTAGTGTTATATAGT+AGG - Chr4:60263276-60263295 MsG0480021587.01.T01:intron 20.0%
! AAATCTATAAAGTTCCCTAT+TGG + Chr4:60263135-60263154 None:intergenic 25.0%
! AAATCTGCTTAATTCTTTGA+CGG - Chr4:60261118-60261137 MsG0480021587.01.T01:intron 25.0%
! AAATGGCTTATTAAAGTCAT+CGG + Chr4:60264138-60264157 None:intergenic 25.0%
! AACCTGTAAAAAACACATAA+TGG + Chr4:60260473-60260492 None:intergenic 25.0%
! AAGTAATGTTGTCTAATTTC+AGG - Chr4:60261948-60261967 MsG0480021587.01.T01:intron 25.0%
! AAGTATTATAGTGAAGAAGT+TGG - Chr4:60264395-60264414 MsG0480021587.01.T01:intron 25.0%
! AATCTATAAAGTTCCCTATT+GGG + Chr4:60263134-60263153 None:intergenic 25.0%
! ACACACAAATTCTTATATTG+GGG - Chr4:60263199-60263218 MsG0480021587.01.T01:intron 25.0%
! AGTAAACAGAAATATTAGCA+TGG + Chr4:60260711-60260730 None:intergenic 25.0%
! AGTAATGTTGTCTAATTTCA+GGG - Chr4:60261949-60261968 MsG0480021587.01.T01:intron 25.0%
! ATAATGATTCTTACCCAATA+GGG - Chr4:60263118-60263137 MsG0480021587.01.T01:CDS 25.0%
! ATGGCAAAACTATATAATCT+TGG - Chr4:60261678-60261697 MsG0480021587.01.T01:intron 25.0%
! CTACACACAAATTCTTATAT+TGG - Chr4:60263197-60263216 MsG0480021587.01.T01:intron 25.0%
! GGTAATGCTAAATCTAAAAA+AGG - Chr4:60259804-60259823 MsG0480021587.01.T01:CDS 25.0%
! TAATTGCTATGAAACTGAAA+TGG + Chr4:60264155-60264174 None:intergenic 25.0%
! TATAATGATTCTTACCCAAT+AGG - Chr4:60263117-60263136 MsG0480021587.01.T01:CDS 25.0%
! TCATCTATTTCGTCAATTTA+AGG - Chr4:60262538-60262557 MsG0480021587.01.T01:intron 25.0%
! TGATATAAACCACTCTAATA+TGG + Chr4:60263858-60263877 None:intergenic 25.0%
! TTAGTAGTGTTATATAGTAG+GGG - Chr4:60263278-60263297 MsG0480021587.01.T01:intron 25.0%
! TTGTTTAACATCAATAATGG+AGG + Chr4:60259839-60259858 None:intergenic 25.0%
!! ATGTTGTGATATTGCAATTT+TGG - Chr4:60260211-60260230 MsG0480021587.01.T01:intron 25.0%
!! ATTTTACCTTGCACAAATTT+GGG - Chr4:60263973-60263992 MsG0480021587.01.T01:intron 25.0%
!! CAAGATTTTACGATTCAAAT+CGG + Chr4:60262665-60262684 None:intergenic 25.0%
!! TATTTTACCTTGCACAAATT+TGG - Chr4:60263972-60263991 MsG0480021587.01.T01:intron 25.0%
!! TCTTCTTTTATTCTAAGTTG+TGG - Chr4:60260662-60260681 MsG0480021587.01.T01:intron 25.0%
!!! ATCAAATAAAGTTAGTTTGC+TGG - Chr4:60260965-60260984 MsG0480021587.01.T01:intron 25.0%
!!! GAACACAATCTGAAATATTT+TGG - Chr4:60263500-60263519 MsG0480021587.01.T01:CDS 25.0%
!!! GAGTCAAAAAGTATTTTGTT+TGG - Chr4:60264417-60264436 MsG0480021587.01.T01:intron 25.0%
!!! TCAAATAAAGTTAGTTTGCT+GGG - Chr4:60260966-60260985 MsG0480021587.01.T01:intron 25.0%
!!! TTCCATTATGTGTTTTTTAC+AGG - Chr4:60260468-60260487 MsG0480021587.01.T01:intron 25.0%
!!! TTGAAAAGTACCTTCAAAAA+AGG + Chr4:60264069-60264088 None:intergenic 25.0%
AAAACTACTAAGCTAGAGTA+CGG + Chr4:60260314-60260333 None:intergenic 30.0%
AAAATGTATTTCATCCGTTG+TGG + Chr4:60263260-60263279 None:intergenic 30.0%
AAATAGATGATCGATGACAT+TGG + Chr4:60262528-60262547 None:intergenic 30.0%
AAATGTATTTCATCCGTTGT+GGG + Chr4:60263259-60263278 None:intergenic 30.0%
AAGAATCATTATAACACGCA+TGG + Chr4:60263110-60263129 None:intergenic 30.0%
AATGAAGGAACTTTGTGTTA+AGG - Chr4:60261599-60261618 MsG0480021587.01.T01:intron 30.0%
AATGGGAGTTATTGAATGAT+TGG + Chr4:60260172-60260191 None:intergenic 30.0%
AATTTCACGCAAAATTGGAA+AGG + Chr4:60263062-60263081 None:intergenic 30.0%
ACATATTCCAAATCATCATC+AGG + Chr4:60262200-60262219 None:intergenic 30.0%
ACTTCATATAAAGGTCTTTG+AGG - Chr4:60260614-60260633 MsG0480021587.01.T01:intron 30.0%
AGAATCATTATAACACGCAT+GGG + Chr4:60263109-60263128 None:intergenic 30.0%
AGAGTGGTTTATATCATATG+AGG - Chr4:60263862-60263881 MsG0480021587.01.T01:intron 30.0%
ATCGAAATTTCACGCAAAAT+TGG + Chr4:60263067-60263086 None:intergenic 30.0%
ATGAATAATCTTTGCGCTTT+GGG + Chr4:60262785-60262804 None:intergenic 30.0%
ATTCAATAACTCCCATTCTT+GGG - Chr4:60260175-60260194 MsG0480021587.01.T01:intron 30.0%
ATTGATCCGGTATTTAAGTA+TGG - Chr4:60261764-60261783 MsG0480021587.01.T01:intron 30.0%
ATTTCACGCAAAATTGGAAA+GGG + Chr4:60263061-60263080 None:intergenic 30.0%
ATTTGATATTTCAGTGGTGA+AGG - Chr4:60261164-60261183 MsG0480021587.01.T01:intron 30.0%
CAATTTAAGGATTACATGGA+CGG - Chr4:60262551-60262570 MsG0480021587.01.T01:intron 30.0%
GATTAGTGCTAAGATTGTTT+GGG - Chr4:60263021-60263040 MsG0480021587.01.T01:intron 30.0%
GTAACCTGAATTGAAAAAAG+TGG - Chr4:60263229-60263248 MsG0480021587.01.T01:intron 30.0%
TAAACCAAACAAATCCTAAG+TGG + Chr4:60260899-60260918 None:intergenic 30.0%
TCCTGTTAGTGCTAAAATAT+AGG - Chr4:60262358-60262377 MsG0480021587.01.T01:intron 30.0%
TCGTCAATTTAAGGATTACA+TGG - Chr4:60262547-60262566 MsG0480021587.01.T01:intron 30.0%
TTAACACAAAGTTCCTTCAT+TGG + Chr4:60261600-60261619 None:intergenic 30.0%
TTACCGTTATTATTCAATCC+CGG + Chr4:60264282-60264301 None:intergenic 30.0%
TTACGATATTCGTAACATGA+AGG - Chr4:60261857-60261876 MsG0480021587.01.T01:CDS 30.0%
TTGGTTGTTAACATTATGCT+TGG - Chr4:60260230-60260249 MsG0480021587.01.T01:intron 30.0%
TTTCATCATTGCCTTGAATA+AGG - Chr4:60260410-60260429 MsG0480021587.01.T01:intron 30.0%
! AATGATAGTGTTGGAAACTT+AGG - Chr4:60261828-60261847 MsG0480021587.01.T01:CDS 30.0%
! ATTTCTCAATCATGGTCTTT+TGG + Chr4:60261226-60261245 None:intergenic 30.0%
! TATTTAAGTATGGTTTGGGT+AGG - Chr4:60261774-60261793 MsG0480021587.01.T01:intron 30.0%
! TTCAAGCTGACTTCATATAA+AGG - Chr4:60260605-60260624 MsG0480021587.01.T01:intron 30.0%
! TTTCTCAATCATGGTCTTTT+GGG + Chr4:60261225-60261244 None:intergenic 30.0%
!! CTATCAAATTTGTTGCTTGA+TGG - Chr4:60261659-60261678 MsG0480021587.01.T01:intron 30.0%
!! GTGCACAATCTGAAATATTT+TGG - Chr4:60263522-60263541 MsG0480021587.01.T01:CDS 30.0%
!!! ACCTATATTTTAGCACTAAC+AGG + Chr4:60262362-60262381 None:intergenic 30.0%
!!! ACTTCCACTTTTTTCAATTC+AGG + Chr4:60263236-60263255 None:intergenic 30.0%
!!! CATGTTTTCCTTTAAAACGT+TGG + Chr4:60264231-60264250 None:intergenic 30.0%
!!! GAATTTTAACTACCATGCAT+GGG + Chr4:60262643-60262662 None:intergenic 30.0%
!!! GCAATGATTTCCTTTTTTGA+AGG - Chr4:60264056-60264075 MsG0480021587.01.T01:intron 30.0%
AAAGAAATCAAAGCTGTGAG+GGG - Chr4:60261988-60262007 MsG0480021587.01.T01:CDS 35.0%
AAGCACAAGCTCATGAAATT+AGG - Chr4:60264480-60264499 MsG0480021587.01.T01:intron 35.0%
AATGACTGATGACAAATCTG+TGG - Chr4:60264457-60264476 MsG0480021587.01.T01:intron 35.0%
ACAAAGAAATCAAAGCTGTG+AGG - Chr4:60261986-60262005 MsG0480021587.01.T01:CDS 35.0%
ACAACAGAAATAACATGTCC+GGG + Chr4:60261193-60261212 None:intergenic 35.0%
ACATACACACTAGATGGTTA+TGG + Chr4:60261705-60261724 None:intergenic 35.0%
AGAACTGTGTGACAAAATTG+AGG + Chr4:60260496-60260515 None:intergenic 35.0%
ATAACCATCTAGTGTGTATG+TGG - Chr4:60261704-60261723 MsG0480021587.01.T01:intron 35.0%
ATAAGATTTCCTGTTATCGC+AGG - Chr4:60262130-60262149 MsG0480021587.01.T01:CDS 35.0%
ATAGCAATTACTTCAAACGC+TGG - Chr4:60264165-60264184 MsG0480021587.01.T01:CDS 35.0%
ATCATTGCCTAAGAGATTAC+CGG + Chr4:60264044-60264063 None:intergenic 35.0%
ATGCTAGGTAATTTCTACAC+TGG - Chr4:60260059-60260078 MsG0480021587.01.T01:intron 35.0%
ATGTGGAGTTATTCTTGAGA+GGG - Chr4:60262240-60262259 MsG0480021587.01.T01:intron 35.0%
ATTTACCTTATTGCACCTGT+TGG + Chr4:60260823-60260842 None:intergenic 35.0%
CAAAGAAATCAAAGCTGTGA+GGG - Chr4:60261987-60262006 MsG0480021587.01.T01:CDS 35.0%
CAACCGGGATTGAATAATAA+CGG - Chr4:60264276-60264295 MsG0480021587.01.T01:CDS 35.0%
CAACTCAATATCAAGTACCT+GGG + Chr4:60262028-60262047 None:intergenic 35.0%
CATTCAATAACTCCCATTCT+TGG - Chr4:60260174-60260193 MsG0480021587.01.T01:intron 35.0%
CCCAAACCATACTTAAATAC+CGG + Chr4:60261773-60261792 None:intergenic 35.0%
CCGGTATTTAAGTATGGTTT+GGG - Chr4:60261770-60261789 MsG0480021587.01.T01:intron 35.0%
CGAGAAACCAATATTCAACA+AGG - Chr4:60260107-60260126 MsG0480021587.01.T01:intron 35.0%
CGATTAGTGCTAAGATTGTT+TGG - Chr4:60263020-60263039 MsG0480021587.01.T01:intron 35.0%
CTAACAGGAATATTCACTTC+TGG + Chr4:60262347-60262366 None:intergenic 35.0%
GAAGATAGCTCACAAAATTG+TGG - Chr4:60264502-60264521 MsG0480021587.01.T01:intron 35.0%
GAAGCAGCAAGTCATAAAAT+TGG + Chr4:60260444-60260463 None:intergenic 35.0%
GACAACAGAAATAACATGTC+CGG + Chr4:60261194-60261213 None:intergenic 35.0%
GATGAATAATCTTTGCGCTT+TGG + Chr4:60262786-60262805 None:intergenic 35.0%
GGTGATCAAATAGTTGTATC+TGG - Chr4:60261451-60261470 MsG0480021587.01.T01:intron 35.0%
GTTAATGGTGTTCTACATGA+AGG - Chr4:60261430-60261449 MsG0480021587.01.T01:intron 35.0%
TAAGATTTCCTGTTATCGCA+GGG - Chr4:60262131-60262150 MsG0480021587.01.T01:CDS 35.0%
TAATAACGGTAAGTCTCCAA+TGG - Chr4:60264290-60264309 MsG0480021587.01.T01:CDS 35.0%
TACTTATAGTGAAGACATGC+AGG - Chr4:60261246-60261265 MsG0480021587.01.T01:intron 35.0%
TCAACTCAATATCAAGTACC+TGG + Chr4:60262029-60262048 None:intergenic 35.0%
TCAGACATATCTGAATCCAT+TGG + Chr4:60264309-60264328 None:intergenic 35.0%
TCCGGTATTTAAGTATGGTT+TGG - Chr4:60261769-60261788 MsG0480021587.01.T01:intron 35.0%
TGGTTTAATATGTATGGGAG+TGG - Chr4:60260912-60260931 MsG0480021587.01.T01:intron 35.0%
TGTAATGCTTGGAAAGAAAC+AGG - Chr4:60262414-60262433 MsG0480021587.01.T01:intron 35.0%
TGTCAATAAAGCTCGAATTG+TGG + Chr4:60261571-60261590 None:intergenic 35.0%
TTACCTAGCATGTAGCAAAT+TGG + Chr4:60260050-60260069 None:intergenic 35.0%
TTAGCAAGTAAAGTTGTTCG+TGG - Chr4:60261898-60261917 MsG0480021587.01.T01:intron 35.0%
TTATCCCCATCAGAAACAAA+TGG + Chr4:60261041-60261060 None:intergenic 35.0%
TTCAATAACTCCCATTCTTG+GGG - Chr4:60260176-60260195 MsG0480021587.01.T01:intron 35.0%
TTCCAACACTATCATTTGCA+CGG + Chr4:60261824-60261843 None:intergenic 35.0%
TTGCAAGTCAAGGTTATTGA+AGG - Chr4:60261379-60261398 MsG0480021587.01.T01:intron 35.0%
TTTAATATGTATGGGAGTGG+TGG - Chr4:60260915-60260934 MsG0480021587.01.T01:intron 35.0%
TTTCACGCAAAATTGGAAAG+GGG + Chr4:60263060-60263079 None:intergenic 35.0%
! AAAGGTTGCCAACGTTTTAA+AGG - Chr4:60264220-60264239 MsG0480021587.01.T01:CDS 35.0%
! AATAGTTGTATCTGGAATGC+AGG - Chr4:60261459-60261478 MsG0480021587.01.T01:intron 35.0%
! ACAGGAGTATGCTACTATAT+TGG - Chr4:60262432-60262451 MsG0480021587.01.T01:intron 35.0%
! ATCTCTTTTCTTTACTCCGT+CGG - Chr4:60263814-60263833 MsG0480021587.01.T01:CDS 35.0%
! TGTTTCTGATGGGGATAATT+TGG - Chr4:60261043-60261062 MsG0480021587.01.T01:intron 35.0%
!! GGAGAAGATTCTAGAATCAA+GGG - Chr4:60260936-60260955 MsG0480021587.01.T01:intron 35.0%
!! TGGAGAAGATTCTAGAATCA+AGG - Chr4:60260935-60260954 MsG0480021587.01.T01:intron 35.0%
!! TGTTATTTCTGTTGTCTCAG+TGG - Chr4:60261198-60261217 MsG0480021587.01.T01:intron 35.0%
!! TTACCAATTTGCTACATGCT+AGG - Chr4:60260044-60260063 MsG0480021587.01.T01:intron 35.0%
!!! GGAATTTTAACTACCATGCA+TGG + Chr4:60262644-60262663 None:intergenic 35.0%
AAAAACCAACTCATGTCTGC+TGG - Chr4:60259993-60260012 MsG0480021587.01.T01:intron 40.0%
AAAAAGTGGAAGTCCCACAA+CGG - Chr4:60263243-60263262 MsG0480021587.01.T01:intron 40.0%
AAAACCAACTCATGTCTGCT+GGG - Chr4:60259994-60260013 MsG0480021587.01.T01:intron 40.0%
AAACAAATGGAGCAGCTTAC+AGG + Chr4:60261028-60261047 None:intergenic 40.0%
AACAAATCCTAAGTGGATGC+AGG + Chr4:60260892-60260911 None:intergenic 40.0%
AACATTACTTAGCTCCTGGA+AGG + Chr4:60261938-60261957 None:intergenic 40.0%
AATCAACCCGGTAATCTCTT+AGG - Chr4:60264034-60264053 MsG0480021587.01.T01:intron 40.0%
AATTGTGGCTGAAGGAATGT+AGG - Chr4:60264517-60264536 MsG0480021587.01.T01:CDS 40.0%
AATTTCTTCGGTAGTGATGG+TGG + Chr4:60264100-60264119 None:intergenic 40.0%
ACACAACCCAAATTTGTGCA+AGG + Chr4:60263982-60264001 None:intergenic 40.0%
ACGATACTGCTAAACAGGTT+TGG - Chr4:60264357-60264376 MsG0480021587.01.T01:CDS 40.0%
ACTCTACGATACTGCTAAAC+AGG - Chr4:60264352-60264371 MsG0480021587.01.T01:CDS 40.0%
AGACAACATTACTTAGCTCC+TGG + Chr4:60261942-60261961 None:intergenic 40.0%
AGACTTAGCTGTTATTCCAC+TGG - Chr4:60261337-60261356 MsG0480021587.01.T01:intron 40.0%
AGTAATGCTTCCAATGAGCT+AGG + Chr4:60262308-60262327 None:intergenic 40.0%
AGTTCTTACAACTTTGCAGG+TGG - Chr4:60260510-60260529 MsG0480021587.01.T01:intron 40.0%
ATCACATCCTTCGTATGCAT+GGG + Chr4:60262385-60262404 None:intergenic 40.0%
ATTGACACCTCATCCAATGA+AGG - Chr4:60261584-60261603 MsG0480021587.01.T01:intron 40.0%
ATTGCTCAGTTCAAGTCTCA+GGG - Chr4:60260739-60260758 MsG0480021587.01.T01:intron 40.0%
CAAAGTTCCTTCATTGGATG+AGG + Chr4:60261594-60261613 None:intergenic 40.0%
CACAGTTCTTACAACTTTGC+AGG - Chr4:60260507-60260526 MsG0480021587.01.T01:intron 40.0%
CCTCATAATTACATACCCCT+TGG + Chr4:60263311-60263330 None:intergenic 40.0%
CGATACTGCTAAACAGGTTT+GGG - Chr4:60264358-60264377 MsG0480021587.01.T01:CDS 40.0%
CGTTATTATTCAATCCCGGT+TGG + Chr4:60264278-60264297 None:intergenic 40.0%
CTCAGCACCTTGTTGAATAT+TGG + Chr4:60260117-60260136 None:intergenic 40.0%
GAATAACTCCACATCTTCGA+AGG + Chr4:60262234-60262253 None:intergenic 40.0%
GACGGAGTAAAGAAAAGAGA+TGG + Chr4:60263815-60263834 None:intergenic 40.0%
GATCTGATCATGAATCAACC+CGG - Chr4:60264022-60264041 MsG0480021587.01.T01:intron 40.0%
GATGAAATGCGTAGAGATTG+CGG + Chr4:60260263-60260282 None:intergenic 40.0%
GATGTGGAGTTATTCTTGAG+AGG - Chr4:60262239-60262258 MsG0480021587.01.T01:intron 40.0%
GCTCGAATTGTGGTAACAAT+TGG + Chr4:60261561-60261580 None:intergenic 40.0%
GGGAGTTATTGAATGATTGG+TGG + Chr4:60260169-60260188 None:intergenic 40.0%
GGTAATTTCTTCGGTAGTGA+TGG + Chr4:60264103-60264122 None:intergenic 40.0%
GTCAAGGTTATTGAAGGCTA+TGG - Chr4:60261385-60261404 MsG0480021587.01.T01:intron 40.0%
GTCTTCGTACCATATTAGAG+TGG - Chr4:60263846-60263865 MsG0480021587.01.T01:intron 40.0%
TACTAAGCTAGAGTACGGTA+GGG + Chr4:60260309-60260328 None:intergenic 40.0%
TAGATGATCGATGACATTGG+AGG + Chr4:60262525-60262544 None:intergenic 40.0%
TATTGCTCAGTTCAAGTCTC+AGG - Chr4:60260738-60260757 MsG0480021587.01.T01:intron 40.0%
TCATTGCCTAAGAGATTACC+GGG + Chr4:60264043-60264062 None:intergenic 40.0%
TCCACACTCGGTAATTTCTT+CGG + Chr4:60264112-60264131 None:intergenic 40.0%
TCGAATACGATCTAGAAGCT+TGG + Chr4:60260090-60260109 None:intergenic 40.0%
TCTGATGGGGATAATTTGGT+AGG - Chr4:60261047-60261066 MsG0480021587.01.T01:intron 40.0%
TCTGTAAAGATCATCTCAGC+AGG + Chr4:60264333-60264352 None:intergenic 40.0%
TGGAATGCTGACCTTATTCA+AGG + Chr4:60260424-60260443 None:intergenic 40.0%
TTCATATTAGCATGCCTTCC+AGG - Chr4:60261921-60261940 MsG0480021587.01.T01:intron 40.0%
TTCATCACTGCTTCACGAAT+TGG + Chr4:60260571-60260590 None:intergenic 40.0%
! ATCCGTGCAAATGATAGTGT+TGG - Chr4:60261819-60261838 MsG0480021587.01.T01:intron 40.0%
! CAAAGTGTTCTATTCCAACC+GGG - Chr4:60264261-60264280 MsG0480021587.01.T01:CDS 40.0%
! CCAAAGTGTTCTATTCCAAC+CGG - Chr4:60264260-60264279 MsG0480021587.01.T01:CDS 40.0%
! CCAAGGGGTATGTAATTATG+AGG - Chr4:60263308-60263327 MsG0480021587.01.T01:intron 40.0%
! GCATCCACTTAGGATTTGTT+TGG - Chr4:60260892-60260911 MsG0480021587.01.T01:intron 40.0%
! GTATGGTTTGGGTAGGAAAA+AGG - Chr4:60261781-60261800 MsG0480021587.01.T01:intron 40.0%
! GTGTACTGTTTTGCAAGTCA+AGG - Chr4:60261369-60261388 MsG0480021587.01.T01:intron 40.0%
! TGACTTGCAAAACAGTACAC+TGG + Chr4:60261369-60261388 None:intergenic 40.0%
! TTACATGGACTACGTTATGG+AGG - Chr4:60262583-60262602 MsG0480021587.01.T01:intron 40.0%
! TTCTGGCGCTAGTCTATATA+TGG - Chr4:60262169-60262188 MsG0480021587.01.T01:intron 40.0%
!! AGCTAATGAGGTTTTAACCG+AGG + Chr4:60262753-60262772 None:intergenic 40.0%
!! AGGAGCGCAAATCTTTGTTT+TGG - Chr4:60261067-60261086 MsG0480021587.01.T01:intron 40.0%
!! CAATATTCAACAAGGTGCTG+AGG - Chr4:60260115-60260134 MsG0480021587.01.T01:intron 40.0%
!! CTGCTCCATTTGTTTCTGAT+GGG - Chr4:60261033-60261052 MsG0480021587.01.T01:intron 40.0%
!! GAAGATTCTAGAATCAAGGG+AGG - Chr4:60260939-60260958 MsG0480021587.01.T01:intron 40.0%
!! TAGCTCATTGGAAGCATTAC+TGG - Chr4:60262307-60262326 MsG0480021587.01.T01:CDS 40.0%
!! TGCTCCATTTGTTTCTGATG+GGG - Chr4:60261034-60261053 MsG0480021587.01.T01:intron 40.0%
!! TTTTGCTTTTCCTCCACAAC+AGG - Chr4:60259903-60259922 MsG0480021587.01.T01:CDS 40.0%
!!! GGAGCGCAAATCTTTGTTTT+GGG - Chr4:60261068-60261087 MsG0480021587.01.T01:intron 40.0%
!!! TTGAACTGAGCTGTTTTTCC+TGG - Chr4:60263934-60263953 MsG0480021587.01.T01:intron 40.0%
AAAGCAGGCCAAAGTTGTTG+TGG - Chr4:60259956-60259975 MsG0480021587.01.T01:CDS 45.0%
AACACGCATGGGAACAACTA+AGG + Chr4:60263098-60263117 None:intergenic 45.0%
ACATTCAGCATTGTGCCAAC+AGG - Chr4:60260805-60260824 MsG0480021587.01.T01:intron 45.0%
ACCGAAGAAATTACCGAGTG+TGG - Chr4:60264108-60264127 MsG0480021587.01.T01:CDS 45.0%
ACCTAGGGCAAAAGAATCAC+TGG + Chr4:60261731-60261750 None:intergenic 45.0%
ACTAAGCTAGAGTACGGTAG+GGG + Chr4:60260308-60260327 None:intergenic 45.0%
AGAGAGAGAATCTGTTGACG+AGG - Chr4:60262610-60262629 MsG0480021587.01.T01:intron 45.0%
ATAGAGCTGAACCCCAAGAA+TGG + Chr4:60260190-60260209 None:intergenic 45.0%
ATGAAGGCAGGTGTAATGCT+TGG - Chr4:60262403-60262422 MsG0480021587.01.T01:intron 45.0%
CAGGAACAAGAACAGCGAAT+AGG + Chr4:60260873-60260892 None:intergenic 45.0%
CATCACATCCTTCGTATGCA+TGG + Chr4:60262386-60262405 None:intergenic 45.0%
CCGGTTGGAATAGAACACTT+TGG + Chr4:60264263-60264282 None:intergenic 45.0%
CTACTAAGCTAGAGTACGGT+AGG + Chr4:60260310-60260329 None:intergenic 45.0%
CTTAGCTGTTATTCCACTGG+CGG - Chr4:60261340-60261359 MsG0480021587.01.T01:intron 45.0%
GAAAAAATTCGCACACACCC+AGG + Chr4:60262503-60262522 None:intergenic 45.0%
GCATACGAAGGATGTGATGA+AGG - Chr4:60262387-60262406 MsG0480021587.01.T01:intron 45.0%
GCTCACAAAATTGTGGCTGA+AGG - Chr4:60264509-60264528 MsG0480021587.01.T01:CDS 45.0%
GCTTTCTATCTTCAGCCACA+GGG + Chr4:60259941-60259960 None:intergenic 45.0%
GGATTACATGGACGGCATTA+AGG - Chr4:60262559-60262578 MsG0480021587.01.T01:intron 45.0%
GTCCTCAACCACAACAACTT+TGG + Chr4:60259967-60259986 None:intergenic 45.0%
GTTGGAAATAGCACCTGTTG+TGG + Chr4:60259919-60259938 None:intergenic 45.0%
TAGAGCTGAACCCCAAGAAT+GGG + Chr4:60260189-60260208 None:intergenic 45.0%
TATAGGTCCCATGCATACGA+AGG - Chr4:60262375-60262394 MsG0480021587.01.T01:intron 45.0%
TCATCATCACTCCGCTTAGA+TGG + Chr4:60260020-60260039 None:intergenic 45.0%
TCTTGTTCCTGCATCCACTT+AGG - Chr4:60260882-60260901 MsG0480021587.01.T01:intron 45.0%
TGCTTTCTATCTTCAGCCAC+AGG + Chr4:60259942-60259961 None:intergenic 45.0%
TGGTCCACATACACACTAGA+TGG + Chr4:60261711-60261730 None:intergenic 45.0%
TGTGGCTGAAGATAGAAAGC+AGG - Chr4:60259941-60259960 MsG0480021587.01.T01:CDS 45.0%
TTAGCTGTTATTCCACTGGC+GGG - Chr4:60261341-60261360 MsG0480021587.01.T01:intron 45.0%
TTGCTCAGTTCAAGTCTCAG+GGG - Chr4:60260740-60260759 MsG0480021587.01.T01:intron 45.0%
TTGTGCCAACAGGTGCAATA+AGG - Chr4:60260815-60260834 MsG0480021587.01.T01:intron 45.0%
TTTCAGTGGTGAAGGAATCC+CGG - Chr4:60261172-60261191 MsG0480021587.01.T01:intron 45.0%
! ACCAGTGATTCTTTTGCCCT+AGG - Chr4:60261727-60261746 MsG0480021587.01.T01:intron 45.0%
! GCTTCACGAATTGGAGCATT+AGG + Chr4:60260562-60260581 None:intergenic 45.0%
! GGACTTGAACACGCTATTTC+TGG - Chr4:60262152-60262171 MsG0480021587.01.T01:CDS 45.0%
! GGCTTACATGGACTACGTTA+TGG - Chr4:60262580-60262599 MsG0480021587.01.T01:intron 45.0%
! GGTGAAGCCTGATGATGATT+TGG - Chr4:60262190-60262209 MsG0480021587.01.T01:intron 45.0%
! TAGTTTTCACCACCTGTCCA+GGG - Chr4:60260327-60260346 MsG0480021587.01.T01:intron 45.0%
!! GCTGCTCCATTTGTTTCTGA+TGG - Chr4:60261032-60261051 MsG0480021587.01.T01:intron 45.0%
!!! TTTACTCCGTCGGTTTTGAG+TGG - Chr4:60263824-60263843 MsG0480021587.01.T01:CDS 45.0%
!!! TATTGATATATATTTTTTTA+GGG - Chr4:60263374-60263393 MsG0480021587.01.T01:intron 5.0%
AAAAGCGGCCTTCGAAGATG+TGG - Chr4:60262223-60262242 MsG0480021587.01.T01:intron 50.0%
ACGAAGGATGTGATGAAGGC+AGG - Chr4:60262391-60262410 MsG0480021587.01.T01:intron 50.0%
AGCCAACTTGCAGATGACCT+GGG - Chr4:60262483-60262502 MsG0480021587.01.T01:intron 50.0%
AGGTGGATATGATTCCTCGC+TGG - Chr4:60260527-60260546 MsG0480021587.01.T01:intron 50.0%
ATGAGCTAGGTGTAGATGCC+TGG + Chr4:60262295-60262314 None:intergenic 50.0%
CGAAGACCACTCAAAACCGA+CGG + Chr4:60263833-60263852 None:intergenic 50.0%
GGAAATAGCACCTGTTGTGG+AGG + Chr4:60259916-60259935 None:intergenic 50.0%
GGACGGCATTAAGGCTTACA+TGG - Chr4:60262568-60262587 MsG0480021587.01.T01:intron 50.0%
GGCATCTACACCTAGCTCAT+TGG - Chr4:60262295-60262314 MsG0480021587.01.T01:intron 50.0%
GGCCAAAGTTGTTGTGGTTG+AGG - Chr4:60259962-60259981 MsG0480021587.01.T01:CDS 50.0%
GGGCAATGACACAGCTAATG+AGG + Chr4:60262765-60262784 None:intergenic 50.0%
GTTCAAGTCCCTGCGATAAC+AGG + Chr4:60262142-60262161 None:intergenic 50.0%
TACGCATTTCATCGCTCCAC+CGG - Chr4:60260270-60260289 MsG0480021587.01.T01:intron 50.0%
TAGCCAACTTGCAGATGACC+TGG - Chr4:60262482-60262501 MsG0480021587.01.T01:intron 50.0%
TAGCTGTTATTCCACTGGCG+GGG - Chr4:60261342-60261361 MsG0480021587.01.T01:intron 50.0%
TCTATCTTCAGCCACAGGGT+TGG + Chr4:60259937-60259956 None:intergenic 50.0%
TCTCTAGCCGTCAAATCCCA+GGG + Chr4:60260358-60260377 None:intergenic 50.0%
TTAGGACATGCTTTCCAGCG+AGG + Chr4:60260544-60260563 None:intergenic 50.0%
TTGAGAGGGATCGACAGTAG+TGG - Chr4:60262254-60262273 MsG0480021587.01.T01:intron 50.0%
! AGTCATCGGCTATCCACACT+CGG + Chr4:60264124-60264143 None:intergenic 50.0%
! GTAGTTTTCACCACCTGTCC+AGG - Chr4:60260326-60260345 MsG0480021587.01.T01:intron 50.0%
!! AGGTGCTATTTCCAACCCTG+TGG - Chr4:60259923-60259942 MsG0480021587.01.T01:CDS 50.0%
!! ATAGTAGGGGTGTCTCTCCA+AGG - Chr4:60263291-60263310 MsG0480021587.01.T01:intron 50.0%
!! CTGCAAGTTGGCTAGCTTCA+AGG + Chr4:60262476-60262495 None:intergenic 50.0%
!! TAGTAGGGGTGTCTCTCCAA+GGG - Chr4:60263292-60263311 MsG0480021587.01.T01:intron 50.0%
!! TGGTGATGGCGTTTATGTCC+AGG - Chr4:60262274-60262293 MsG0480021587.01.T01:intron 50.0%
!!! TGAGCTGTTTTTCCTGGACG+CGG - Chr4:60263940-60263959 MsG0480021587.01.T01:intron 50.0%
AACCAGCAATAGACGCGCCT+CGG - Chr4:60262733-60262752 MsG0480021587.01.T01:CDS 55.0%
ATATAAATCGCGCCGCGTCC+AGG + Chr4:60263955-60263974 None:intergenic 55.0%
ATGGCCCAGCAGACATGAGT+TGG + Chr4:60260001-60260020 None:intergenic 55.0%
CACCCAGGTCATCTGCAAGT+TGG + Chr4:60262488-60262507 None:intergenic 55.0%
CGAGGAAGTCTTCCCATGCA+TGG - Chr4:60262628-60262647 MsG0480021587.01.T01:intron 55.0%
GGGATCGACAGTAGTGGTGA+TGG - Chr4:60262260-60262279 MsG0480021587.01.T01:intron 55.0%
GGGCATCAAGATCATTGCCC+AGG - Chr4:60262008-60262027 MsG0480021587.01.T01:CDS 55.0%
GGTTGAGCCCTGGGATTTGA+CGG - Chr4:60260348-60260367 MsG0480021587.01.T01:intron 55.0%
GTAGGGGCAGAGGGAATTTC+CGG + Chr4:60260292-60260311 None:intergenic 55.0%
GTCTCTAGCCGTCAAATCCC+AGG + Chr4:60260359-60260378 None:intergenic 55.0%
TAGAGTACGGTAGGGGCAGA+GGG + Chr4:60260301-60260320 None:intergenic 55.0%
TGTCTGCTGGGCCATCTAAG+CGG - Chr4:60260006-60260025 MsG0480021587.01.T01:intron 55.0%
!! AGTAGGGGTGTCTCTCCAAG+GGG - Chr4:60263293-60263312 MsG0480021587.01.T01:intron 55.0%
AACCGAGGCGCGTCTATTGC+TGG + Chr4:60262738-60262757 None:intergenic 60.0%
CAAATCCCAGGGCTCAACCC+TGG + Chr4:60260347-60260366 None:intergenic 60.0%
CTAGAGTACGGTAGGGGCAG+AGG + Chr4:60260302-60260321 None:intergenic 60.0%
ACCTGTCCAGGGTTGAGCCC+TGG - Chr4:60260338-60260357 MsG0480021587.01.T01:intron 65.0%
AGGGCTCAACCCTGGACAGG+TGG + Chr4:60260339-60260358 None:intergenic 65.0%
AGTACACTGGTCCCCGCCAG+TGG + Chr4:60261356-60261375 None:intergenic 65.0%
CCTGTCCAGGGTTGAGCCCT+GGG - Chr4:60260339-60260358 MsG0480021587.01.T01:intron 65.0%
GGGGCAGAGGGAATTTCCGG+TGG + Chr4:60260289-60260308 None:intergenic 65.0%
CCCAGGGCTCAACCCTGGAC+AGG + Chr4:60260342-60260361 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 60259795 60264538 60259795 ID=MsG0480021587.01;Name=MsG0480021587.01
Chr4 mRNA 60259795 60264538 60259795 ID=MsG0480021587.01.T01;Parent=MsG0480021587.01;Name=MsG0480021587.01.T01;_AED=0.26;_eAED=0.28;_QI=0|0|0|1|1|1|11|0|444
Chr4 exon 60264508 60264538 60264508 ID=MsG0480021587.01.T01:exon:9670;Parent=MsG0480021587.01.T01
Chr4 exon 60264101 60264408 60264101 ID=MsG0480021587.01.T01:exon:9671;Parent=MsG0480021587.01.T01
Chr4 exon 60263751 60263843 60263751 ID=MsG0480021587.01.T01:exon:9672;Parent=MsG0480021587.01.T01
Chr4 exon 60263497 60263597 60263497 ID=MsG0480021587.01.T01:exon:9673;Parent=MsG0480021587.01.T01
Chr4 exon 60263066 60263155 60263066 ID=MsG0480021587.01.T01:exon:9674;Parent=MsG0480021587.01.T01
Chr4 exon 60262871 60262988 60262871 ID=MsG0480021587.01.T01:exon:9675;Parent=MsG0480021587.01.T01
Chr4 exon 60262713 60262778 60262713 ID=MsG0480021587.01.T01:exon:9676;Parent=MsG0480021587.01.T01
Chr4 exon 60262304 60262363 60262304 ID=MsG0480021587.01.T01:exon:9677;Parent=MsG0480021587.01.T01
Chr4 exon 60261972 60262181 60261972 ID=MsG0480021587.01.T01:exon:9678;Parent=MsG0480021587.01.T01
Chr4 exon 60261827 60261897 60261827 ID=MsG0480021587.01.T01:exon:9679;Parent=MsG0480021587.01.T01
Chr4 exon 60259795 60259981 60259795 ID=MsG0480021587.01.T01:exon:9680;Parent=MsG0480021587.01.T01
Chr4 CDS 60264508 60264538 60264508 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60264101 60264408 60264101 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60263751 60263843 60263751 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60263497 60263597 60263497 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60263066 60263155 60263066 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60262871 60262988 60262871 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60262713 60262778 60262713 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60262304 60262363 60262304 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60261972 60262181 60261972 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60261827 60261897 60261827 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Chr4 CDS 60259795 60259981 60259795 ID=MsG0480021587.01.T01:cds;Parent=MsG0480021587.01.T01
Gene Sequence

>MsG0480021587.01.T01

ATGACGAAAGGTAATGCTAAATCTAAAAAAGGTGCTATTTCCAACCCTGTGGCTGAAGATAGAAAGCAGGCCAAAGTTGTTGTGGTTGAGGACGAAGAGAAAAACCAACTCATGTCTGCTGGGCCATCTAAGCGGAGTGATGATGAGAACTTACCAATTTGCTACATGCTAGGTAATTTCTACACTGGCAAAACCAAGCTTCTAGATCGTATTCGAGAAACCAATATTCAACAAGGTGCTGAGGAATATTGCAGTAATATGCTGTATATTGACCACCAATCATTCAATAACTCCCATTCTTGGGGTTCAGCTCTATTATGTTGTGATATTGCAATTTTGGTTCCTCAATTTTGTCACACAGTTCTTACAACTTTGCAGGTGGATATGATTCCTCGCTGGAAAGCATGTCCTAATGCTCCAATTCGTGAAGCAATTATTGCTCAGTTCAAGTCTCAGGGGCTAAATACTGAATTGTATTATTTAAACAAATCAATAGGAGAAACATTCAGCATTGTGCCAACAGGTGCAATAAGTGGTGAAGGAATCCCGGACATGTTATTTCTGTTGTCTCAGTGGACCCAAAAGACCATGATTGAGAAATTACTTATAGTGAAGACATGCAGCTGTTATTCCACTGGCGGGGACCAGTGTACTGTTTTGCAAGTCAAGGTTATTGAAGGCTATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTACATGAAGGTGATCAAATAGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTTGTGTTAAGGGATCATTTATACATCACAAAGAAATCAAAGCTGTGAGGGGCATCAAGATCATTGCCCAGGGACTTGAACACGCTATTTCTGGCGCTAGTCTATATATGGTGAAGCCTGATGATGATTTGGAATATGTTAAAAAAGCGGCCTTCGAAGATGTGGAGTTATTCTTGAGAGGGATCGACAGTAGTGGTGATGGCGTTTATGTCCAGGCATCTACACCTAGCTCATTGGAAGCATTACTGGAGTTTCTAATAACTCCAGAAGTGAATATTCCTGAGTATGCTACTATATTGGCGTTTGATGTCAAAATCACCTTGAAGCTAGCCAACTTGCAGATGACCTGGGTACTCTACGATACTGCTAAACAGGTTTGGGATGCTCTACATAAAAAGTATTATAGTGAAGAAGTTGGAGTCAAAAAGTATTTTGTTTGGCGATACAAGAACTACAAAATGACTGATGACAAATCTGTGGAAGCACAAGCTCATGAAATTAGGAAGATAGCTCACAAAATTGTGGCTGAAGGAATGTAG
Protein sequence

>MsG0480021587.01.T01

MTKGNAKSKKGAISNPVAEDRKQAKVVVVEDEEKNQLMSAGPSKRSDDENLPICYMLGNFYTGKTKLLDRIRETNIQQGAEEYCSNMLYIDHQSFNNSHSWGSALLCCDIAILVPQFCHTVLTTLQVDMIPRWKACPNAPIREAIIAQFKSQGLNTELYYLNKSIGETFSIVPTGAISGEGIPDMLFLLSQWTQKTMIEKLLIVKTCSCYSTGGDQCTVLQVKVIEGYGTTIDVVLVNGVLHEGDQIGPIVTTIRALLTPHPMKELCVKGSFIHHKEIKAVRGIKIIAQGLEHAISGASLYMVKPDDDLEYVKKAAFEDVELFLRGIDSSGDGVYVQASTPSSLEALLEFLITPEVNIPEYATILAFDVKITLKLANLQMTWVLYDTAKQVWDALHKKYYSEEVGVKKYFVWRYKNYKMTDDKSVEAQAHEIRKIAHKIVAEGM*