AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030795.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030795.01.T01 MTR_6g012800 92.405 316 8 1 1 300 1 316 0.0 609
MsG0680030795.01.T01 MTR_7g011530 75.000 316 63 1 1 300 1 316 0.0 508
MsG0680030795.01.T01 MTR_6g088810 42.574 303 145 7 1 280 76 372 3.25e-75 235
MsG0680030795.01.T01 MTR_8g102380 40.767 287 148 4 14 280 88 372 2.73e-74 233
MsG0680030795.01.T01 MTR_1g086540 39.456 294 155 6 6 280 50 339 1.15e-64 207
MsG0680030795.01.T01 MTR_8g102380 42.449 245 119 4 14 238 88 330 4.55e-63 202
MsG0680030795.01.T01 MTR_7g092780 39.145 304 145 5 6 280 90 382 2.08e-62 202
MsG0680030795.01.T01 MTR_7g102600 39.145 304 150 4 2 280 95 388 9.66e-62 201
MsG0680030795.01.T01 MTR_5g095490 38.966 290 152 7 12 280 67 352 1.79e-58 191
MsG0680030795.01.T01 MTR_6g024165 35.256 312 165 9 3 290 38 336 2.69e-58 190
MsG0680030795.01.T01 MTR_5g012600 35.621 306 169 7 5 289 62 360 3.15e-57 188
MsG0680030795.01.T01 MTR_8g023310 33.882 304 161 5 6 279 279 572 7.46e-55 187
MsG0680030795.01.T01 MTR_5g093970 33.119 311 174 7 5 296 42 337 2.78e-53 177
MsG0680030795.01.T01 MTR_4g124740 34.641 306 150 9 5 282 53 336 1.06e-52 176
MsG0680030795.01.T01 MTR_8g036225 35.161 310 154 8 2 282 28 319 1.78e-52 175
MsG0680030795.01.T01 MTR_4g035980 35.088 285 146 6 6 261 227 501 9.91e-52 178
MsG0680030795.01.T01 MTR_2g073390 33.000 300 168 5 2 279 67 355 3.80e-51 172
MsG0680030795.01.T01 MTR_4g124520 34.641 306 159 5 5 279 209 504 9.57e-51 175
MsG0680030795.01.T01 MTR_4g074290 32.323 297 168 5 5 279 70 355 1.38e-50 171
MsG0680030795.01.T01 MTR_3g008700 32.827 329 169 10 6 300 215 525 1.84e-50 174
MsG0680030795.01.T01 MTR_3g008720 33.333 318 163 9 6 289 215 517 4.85e-50 173
MsG0680030795.01.T01 MTR_7g112580 35.034 294 160 5 8 280 243 526 5.31e-50 174
MsG0680030795.01.T01 MTR_3g033690 32.024 331 173 10 4 300 212 524 1.64e-49 172
MsG0680030795.01.T01 MTR_3g008640 32.219 329 171 10 6 300 215 525 3.84e-49 171
MsG0680030795.01.T01 MTR_2g033970 34.091 308 165 6 6 288 56 350 4.13e-49 167
MsG0680030795.01.T01 MTR_7g053360 32.468 308 162 7 6 279 215 510 4.58e-49 171
MsG0680030795.01.T01 MTR_7g108905 34.641 306 160 6 4 279 244 539 4.75e-49 171
MsG0680030795.01.T01 MTR_0009s0350 30.976 297 172 4 5 279 70 355 1.54e-48 166
MsG0680030795.01.T01 MTR_0009s0340 30.976 297 172 4 5 279 70 355 1.54e-48 166
MsG0680030795.01.T01 MTR_1g083510 33.028 327 170 10 6 300 272 581 6.29e-48 169
MsG0680030795.01.T01 MTR_5g088300 32.886 298 160 7 5 282 36 313 1.79e-47 162
MsG0680030795.01.T01 MTR_4g025670 33.226 310 164 8 6 282 176 475 2.28e-47 166
MsG0680030795.01.T01 MTR_4g087980 32.013 303 166 6 8 280 208 500 4.27e-47 165
MsG0680030795.01.T01 MTR_4g051810 33.224 304 163 7 6 290 37 319 1.26e-46 159
MsG0680030795.01.T01 MTR_6g042660 31.757 296 169 6 6 282 37 318 2.15e-46 159
MsG0680030795.01.T01 MTR_7g112590 32.209 326 173 9 6 299 271 580 2.32e-46 164
MsG0680030795.01.T01 MTR_6g042690 34.000 300 169 6 3 282 35 325 2.87e-46 159
MsG0680030795.01.T01 MTR_2g044810 32.237 304 167 4 5 279 224 517 9.89e-46 162
MsG0680030795.01.T01 MTR_1g054880 32.827 329 171 11 5 300 245 556 1.39e-45 162
MsG0680030795.01.T01 MTR_2g436050 30.247 324 180 8 8 299 252 561 2.18e-45 161
MsG0680030795.01.T01 MTR_4g025690 32.822 326 168 10 6 300 206 511 3.22e-45 160
MsG0680030795.01.T01 MTR_1g083520 32.381 315 169 6 6 286 214 518 7.92e-45 159
MsG0680030795.01.T01 MTR_7g108890 32.390 318 170 9 5 290 249 553 8.33e-45 160
MsG0680030795.01.T01 MTR_7g108875 32.390 318 170 8 5 290 251 555 2.08e-44 159
MsG0680030795.01.T01 MTR_1g088020 33.025 324 167 11 10 300 247 553 3.38e-44 158
MsG0680030795.01.T01 MTR_4g087970 31.788 302 166 6 8 279 209 500 5.96e-44 157
MsG0680030795.01.T01 MTR_3g091380 32.026 306 165 8 6 279 286 580 6.67e-44 158
MsG0680030795.01.T01 MTR_1g008140 32.468 308 163 8 5 279 295 590 1.14e-43 157
MsG0680030795.01.T01 MTR_2g436040 30.061 326 182 8 6 299 232 543 1.69e-43 157
MsG0680030795.01.T01 MTR_8g104645 31.475 305 168 7 6 279 61 355 2.45e-43 152
MsG0680030795.01.T01 MTR_3g010780 32.667 300 165 7 6 279 269 557 3.57e-43 155
MsG0680030795.01.T01 MTR_7g050950 29.836 305 173 7 6 279 242 536 5.25e-43 155
MsG0680030795.01.T01 MTR_1g083470 31.373 306 167 8 6 278 257 552 5.76e-43 155
MsG0680030795.01.T01 MTR_1g083500 31.373 306 167 8 6 278 257 552 5.76e-43 155
MsG0680030795.01.T01 MTR_4g025730 33.663 303 157 9 6 279 205 492 1.49e-42 153
MsG0680030795.01.T01 MTR_2g044880 30.820 305 171 5 6 280 215 509 2.72e-42 152
MsG0680030795.01.T01 MTR_3g010770 33.119 311 163 7 1 278 259 557 2.91e-42 153
MsG0680030795.01.T01 MTR_4g005170 31.373 306 167 8 6 278 262 557 3.30e-42 154
MsG0680030795.01.T01 MTR_8g104655 32.459 305 165 7 6 279 230 524 3.44e-42 152
MsG0680030795.01.T01 MTR_5g088280 31.494 308 162 8 6 290 39 320 7.38e-42 147
MsG0680030795.01.T01 MTR_8g042900 31.457 302 172 6 6 282 276 567 8.45e-42 152
MsG0680030795.01.T01 MTR_8g042910 33.798 287 148 5 6 261 300 575 9.51e-42 152
MsG0680030795.01.T01 MTR_1g033050 32.343 303 165 6 6 282 17 305 1.63e-41 146
MsG0680030795.01.T01 MTR_5g088290 31.525 295 167 4 6 282 48 325 1.77e-41 146
MsG0680030795.01.T01 MTR_1g088225 32.407 324 167 12 10 300 247 551 2.53e-41 150
MsG0680030795.01.T01 MTR_1g083490 31.494 308 164 9 6 278 262 557 2.82e-41 150
MsG0680030795.01.T01 MTR_7g110560 33.882 304 162 7 5 279 239 532 7.14e-41 149
MsG0680030795.01.T01 MTR_7g108900 30.395 329 176 9 5 298 246 556 7.15e-41 149
MsG0680030795.01.T01 MTR_7g050980 30.877 285 158 6 6 261 243 517 9.69e-41 149
MsG0680030795.01.T01 MTR_6g025590 39.429 175 100 2 3 175 46 216 1.13e-40 142
MsG0680030795.01.T01 MTR_8g088610 30.435 322 179 9 8 299 67 373 1.17e-40 145
MsG0680030795.01.T01 MTR_2g436600 30.592 304 168 8 6 288 55 336 1.42e-40 144
MsG0680030795.01.T01 MTR_7g050870 30.392 306 171 8 6 279 242 537 1.99e-40 148
MsG0680030795.01.T01 MTR_4g005180 31.046 306 168 9 6 278 244 539 6.51e-40 147
MsG0680030795.01.T01 MTR_8g023150 31.935 310 168 8 8 288 276 571 7.05e-40 147
MsG0680030795.01.T01 MTR_4g120280 28.173 323 188 7 8 299 260 569 4.35e-39 144
MsG0680030795.01.T01 MTR_2g105560 29.126 309 172 6 5 286 41 329 7.76e-39 139
MsG0680030795.01.T01 MTR_5g083620 30.132 302 171 7 8 279 48 339 1.19e-38 139
MsG0680030795.01.T01 MTR_4g120290 27.523 327 189 7 6 299 258 569 4.08e-38 142
MsG0680030795.01.T01 MTR_1g086190 30.233 301 172 6 8 280 257 547 4.26e-38 142
MsG0680030795.01.T01 MTR_8g093460 29.114 316 178 4 1 279 228 534 7.42e-38 141
MsG0680030795.01.T01 MTR_7g107180 29.721 323 175 10 6 300 7 305 1.04e-37 136
MsG0680030795.01.T01 MTR_1g086210 30.982 326 177 10 8 299 255 566 1.24e-37 140
MsG0680030795.01.T01 MTR_0458s0030 33.574 277 139 9 53 300 52 312 2.03e-37 135
MsG0680030795.01.T01 MTR_1g088040 33.574 277 139 9 53 300 52 312 2.03e-37 135
MsG0680030795.01.T01 MTR_2g044660 29.236 301 177 5 6 280 327 617 4.03e-37 139
MsG0680030795.01.T01 MTR_4g124550 29.276 304 174 6 6 279 285 577 1.75e-36 137
MsG0680030795.01.T01 MTR_2g044810 34.513 226 119 3 83 279 223 448 3.65e-35 132
MsG0680030795.01.T01 MTR_3g095920 28.852 305 172 4 12 279 251 547 1.41e-34 132
MsG0680030795.01.T01 MTR_7g110440 28.115 313 183 5 8 288 261 563 5.30e-34 130
MsG0680030795.01.T01 MTR_7g110420 26.667 315 183 5 8 284 261 565 1.34e-30 121
MsG0680030795.01.T01 MTR_7g110490 28.889 315 178 9 8 288 261 563 1.43e-30 120
MsG0680030795.01.T01 MTR_7g110510 28.889 315 178 9 8 288 261 563 1.43e-30 120
MsG0680030795.01.T01 MTR_0618s0020 33.333 210 110 4 100 279 2 211 2.29e-30 114
MsG0680030795.01.T01 MTR_7g110430 27.875 287 183 6 8 288 261 529 9.30e-29 115
MsG0680030795.01.T01 MTR_8g104580 27.333 300 154 8 6 279 222 483 2.22e-26 108
MsG0680030795.01.T01 MTR_5g083590 27.941 272 150 7 6 269 7 240 3.86e-26 104
MsG0680030795.01.T01 MTR_7g111560 24.924 329 199 9 6 300 240 554 1.73e-24 103
MsG0680030795.01.T01 MTR_0458s0010 28.188 298 179 12 10 300 247 516 3.52e-17 82.0
MsG0680030795.01.T01 MTR_0408s0030 37.168 113 57 2 184 282 33 145 8.42e-17 76.3
MsG0680030795.01.T01 MTR_4g130790 28.436 211 123 7 4 199 20 217 2.29e-16 77.8
MsG0680030795.01.T01 MTR_6g024200 33.884 121 64 3 175 279 150 270 6.46e-16 76.6
MsG0680030795.01.T01 MTR_7g102580 45.349 86 37 2 89 169 72 152 2.64e-15 72.4
MsG0680030795.01.T01 MTR_2g039530 29.655 145 89 3 3 145 49 182 9.06e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030795.01.T01 AT3G29090 71.795 312 72 1 5 300 6 317 1.42e-172 480
MsG0680030795.01.T01 AT5G19730 43.289 298 144 5 4 280 83 376 5.89e-76 237
MsG0680030795.01.T01 AT2G36700 39.088 307 152 5 4 288 40 333 3.93e-66 210
MsG0680030795.01.T01 AT2G36710 38.387 310 153 6 4 288 89 385 3.79e-65 210
MsG0680030795.01.T01 AT5G47500 36.306 314 164 7 5 293 60 362 3.73e-63 203
MsG0680030795.01.T01 AT2G21610 35.548 301 159 6 5 288 55 337 8.45e-62 200
MsG0680030795.01.T01 AT2G21610 35.548 301 159 6 5 288 50 332 9.45e-62 199
MsG0680030795.01.T01 AT1G05310 36.393 305 156 4 6 282 91 385 2.55e-58 192
MsG0680030795.01.T01 AT5G07430 35.254 295 160 4 5 279 66 349 6.61e-58 190
MsG0680030795.01.T01 AT3G17060 35.048 311 164 7 6 291 46 343 2.03e-56 186
MsG0680030795.01.T01 AT5G07420 34.915 295 161 4 5 279 66 349 4.12e-56 185
MsG0680030795.01.T01 AT5G55590 37.162 296 161 5 5 279 81 372 4.92e-56 186
MsG0680030795.01.T01 AT5G61680 33.893 298 165 4 3 279 66 352 8.90e-56 184
MsG0680030795.01.T01 AT3G05620 36.519 293 156 4 8 280 243 525 1.81e-54 186
MsG0680030795.01.T01 AT1G69940 33.110 299 167 5 2 279 63 349 2.42e-54 181
MsG0680030795.01.T01 AT1G23200 36.455 299 155 7 6 280 251 538 1.42e-52 181
MsG0680030795.01.T01 AT5G07410 33.110 299 167 5 2 279 63 349 1.49e-52 176
MsG0680030795.01.T01 AT4G00190 34.211 304 161 6 6 280 165 458 5.62e-51 175
MsG0680030795.01.T01 AT3G06830 34.056 323 167 8 8 300 260 566 2.59e-50 175
MsG0680030795.01.T01 AT5G55590 37.500 256 135 5 5 239 81 332 9.87e-50 168
MsG0680030795.01.T01 AT5G49180 34.426 305 158 8 6 279 260 553 1.27e-49 173
MsG0680030795.01.T01 AT3G05610 33.784 296 158 5 6 274 256 540 2.10e-49 174
MsG0680030795.01.T01 AT4G03930 32.817 323 173 8 6 300 216 522 3.22e-48 168
MsG0680030795.01.T01 AT5G27870 31.399 293 164 3 6 271 253 535 4.52e-48 171
MsG0680030795.01.T01 AT1G11580 34.098 305 159 9 6 279 247 540 4.98e-48 169
MsG0680030795.01.T01 AT3G27980 32.198 323 175 8 6 300 189 495 5.01e-48 167
MsG0680030795.01.T01 AT1G11580 34.098 305 159 9 6 279 268 561 8.24e-48 168
MsG0680030795.01.T01 AT3G43270 34.437 302 158 5 8 279 217 508 2.92e-47 166
MsG0680030795.01.T01 AT4G33230 34.091 308 159 8 7 282 298 593 5.15e-47 167
MsG0680030795.01.T01 AT1G11590 31.889 323 176 7 6 300 216 522 1.07e-46 164
MsG0680030795.01.T01 AT3G14310 33.003 303 163 5 7 279 283 575 2.06e-46 165
MsG0680030795.01.T01 AT5G18990 31.270 307 168 6 3 280 26 318 7.19e-46 158
MsG0680030795.01.T01 AT3G24130 32.450 302 161 8 8 280 36 323 8.83e-46 158
MsG0680030795.01.T01 AT2G45220 33.993 303 153 8 8 279 209 495 2.10e-45 160
MsG0680030795.01.T01 AT5G04960 33.333 321 172 8 6 300 258 562 2.12e-45 162
MsG0680030795.01.T01 AT4G02330 30.945 307 170 7 5 279 258 554 2.59e-45 161
MsG0680030795.01.T01 AT1G53830 32.673 303 164 5 7 279 278 570 7.56e-45 160
MsG0680030795.01.T01 AT4G02320 31.173 324 177 6 6 299 208 515 1.35e-44 159
MsG0680030795.01.T01 AT2G47550 31.447 318 173 6 5 290 245 549 1.27e-43 157
MsG0680030795.01.T01 AT4G02300 32.459 305 166 4 6 280 222 516 2.06e-43 155
MsG0680030795.01.T01 AT2G47280 31.529 314 171 8 4 290 33 329 2.08e-43 151
MsG0680030795.01.T01 AT2G26450 31.429 315 168 9 7 289 303 601 2.14e-43 157
MsG0680030795.01.T01 AT3G47400 32.573 307 164 8 6 279 281 577 2.76e-43 156
MsG0680030795.01.T01 AT3G10710 33.667 300 164 6 6 280 256 545 3.47e-43 155
MsG0680030795.01.T01 AT5G26810 32.051 312 175 6 6 290 34 335 3.51e-43 151
MsG0680030795.01.T01 AT2G47030 31.353 303 171 5 8 281 279 573 4.85e-43 155
MsG0680030795.01.T01 AT2G47040 31.068 309 174 6 2 281 282 580 4.88e-43 155
MsG0680030795.01.T01 AT3G62170 32.237 304 167 6 8 281 279 573 5.94e-43 155
MsG0680030795.01.T01 AT5G51490 33.117 308 162 7 6 279 222 519 6.57e-43 154
MsG0680030795.01.T01 AT3G49220 33.007 306 162 8 6 279 285 579 6.69e-43 155
MsG0680030795.01.T01 AT4G15980 31.707 328 172 9 6 300 402 710 8.29e-43 156
MsG0680030795.01.T01 AT4G15980 31.707 328 172 9 6 300 392 700 9.22e-43 156
MsG0680030795.01.T01 AT3G49220 33.007 306 162 8 6 279 330 624 9.78e-43 155
MsG0680030795.01.T01 AT1G11370 32.937 252 132 4 6 230 46 287 1.64e-42 148
MsG0680030795.01.T01 AT3G10720 32.476 311 163 8 13 290 310 606 2.05e-42 154
MsG0680030795.01.T01 AT5G53370 31.699 306 166 7 6 279 274 568 2.43e-42 154
MsG0680030795.01.T01 AT1G02810 31.579 304 164 7 5 275 264 556 2.54e-42 153
MsG0680030795.01.T01 AT3G60730 32.831 332 172 11 2 300 204 517 2.92e-42 152
MsG0680030795.01.T01 AT5G53370 31.699 306 166 7 6 279 310 604 4.52e-42 153
MsG0680030795.01.T01 AT5G09760 30.671 313 172 4 6 282 241 544 5.17e-42 152
MsG0680030795.01.T01 AT5G09760 30.671 313 172 4 6 282 267 570 9.01e-42 152
MsG0680030795.01.T01 AT5G64640 32.278 316 166 6 6 282 289 595 1.00e-41 152
MsG0680030795.01.T01 AT5G04970 30.284 317 176 6 6 290 308 611 1.42e-41 152
MsG0680030795.01.T01 AT2G26440 31.803 305 165 5 6 279 238 530 6.09e-41 149
MsG0680030795.01.T01 AT5G51500 32.143 308 165 7 6 279 226 523 2.28e-40 147
MsG0680030795.01.T01 AT4G33220 30.719 306 172 6 4 279 90 385 3.14e-40 145
MsG0680030795.01.T01 AT2G43050 31.864 295 169 5 8 280 216 500 8.88e-40 145
MsG0680030795.01.T01 AT2G19150 31.511 311 179 6 6 295 41 338 8.93e-40 142
MsG0680030795.01.T01 AT3G10720 34.468 235 122 4 85 290 19 250 2.13e-39 139
MsG0680030795.01.T01 AT4G33220 30.719 306 172 6 4 279 211 506 2.55e-39 144
MsG0680030795.01.T01 AT3G59010 30.435 299 177 6 8 286 231 518 4.02e-39 144
MsG0680030795.01.T01 AT1G53840 29.667 300 175 7 6 279 281 570 3.85e-38 142
MsG0680030795.01.T01 AT5G20860 28.339 307 174 7 6 280 230 522 1.50e-35 134
MsG0680030795.01.T01 AT3G14300 29.900 301 174 7 6 279 661 951 1.66e-34 133
MsG0680030795.01.T01 AT2G19150 31.048 248 141 4 6 232 41 279 1.27e-30 117
MsG0680030795.01.T01 AT5G20860 26.224 286 139 5 6 261 230 473 1.04e-26 109
MsG0680030795.01.T01 AT1G44980 30.460 174 111 2 6 179 78 241 1.79e-21 91.3

Find 68 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCTGCAGGTTGGAATAAT+TGG 0.131021 6:+9480563 MsG0680030795.01.T01:CDS
GGTCTTTGCATTTACTTATA+TGG 0.186939 6:+9480528 MsG0680030795.01.T01:CDS
CATAATTTCTAAGCAGAATA+TGG 0.223122 6:-9480936 None:intergenic
CACAGGCAATGGGGACCTTT+TGG 0.233917 6:+9480499 MsG0680030795.01.T01:intron
GTGATAGGGAATGGGACTTT+TGG 0.298313 6:+9479250 MsG0680030795.01.T01:CDS
GTATTGACAGTGTCACAAAA+TGG 0.320111 6:+9478722 MsG0680030795.01.T01:CDS
GTCCCTCGAAACGGGTGAAA+TGG 0.336495 6:+9480808 MsG0680030795.01.T01:CDS
GACACACTTTATTTACATTC+TGG 0.338397 6:+9479983 MsG0680030795.01.T01:CDS
CATATCCACTGCAAGTCTGC+TGG 0.341379 6:+9480088 MsG0680030795.01.T01:CDS
TTTATAAATTACAGGTGTTT+CGG 0.349713 6:+9480774 MsG0680030795.01.T01:intron
TGGCAATAGCACTGCACTCT+TGG 0.360428 6:+9480057 MsG0680030795.01.T01:CDS
TTTACAATTGCAGGTTCCTT+GGG 0.365614 6:+9479861 MsG0680030795.01.T01:CDS
GCCTGCAGGTTGGAATAATT+GGG 0.378288 6:+9480564 MsG0680030795.01.T01:CDS
TTGCAGAGTTCTAAGGTGAT+AGG 0.379724 6:+9479235 MsG0680030795.01.T01:intron
TTAAGAGATTGTTATATTGA+AGG 0.418821 6:+9480016 MsG0680030795.01.T01:CDS
GTTGTTGTTGCAGAGTTCTA+AGG 0.419372 6:+9479228 MsG0680030795.01.T01:intron
AGCAGAATATGGAATCCTTA+TGG 0.423601 6:-9480925 None:intergenic
TTCATAATGTTACTCATGCT+TGG 0.424047 6:-9481049 None:intergenic
AGTGGTTGCCGGTAGATTCC+CGG 0.425692 6:-9478827 None:intergenic
TTGCAGGTTCCTTGGGTGGC+AGG 0.427351 6:+9479868 MsG0680030795.01.T01:CDS
TCCCTCGAAACGGGTGAAAT+GGG 0.435014 6:+9480809 MsG0680030795.01.T01:CDS
ACACACGCCGGACGATCATA+AGG 0.440043 6:+9478798 MsG0680030795.01.T01:CDS
TTGCCACGTAAAGTGGTTGC+CGG 0.440601 6:-9478838 None:intergenic
TCTGCTTAGAAATTATGTTA+AGG 0.443185 6:+9480942 MsG0680030795.01.T01:exon
GGCCCATTTCACCCGTTTCG+AGG 0.443339 6:-9480811 None:intergenic
TTAGTCTTTGCCACGTAAAG+TGG 0.451757 6:-9478845 None:intergenic
TGGAAGTACGATTGTGGAAG+GGG 0.453802 6:+9479276 MsG0680030795.01.T01:CDS
TGTGACACTGTCAATACAAA+AGG 0.455866 6:-9478716 None:intergenic
TTCTTTATTCTTCAACACTC+TGG 0.457533 6:-9480832 None:intergenic
AAATTACAGGTGTTTCGGAC+CGG 0.462981 6:+9480779 MsG0680030795.01.T01:intron
CCCCAATTATTCCAACCTGC+AGG 0.464703 6:-9480565 None:intergenic
GATGTGCTATCACAGGCAAT+GGG 0.470835 6:+9480489 MsG0680030795.01.T01:intron
ACAGTGTCACAAAATGGAAC+AGG 0.476089 6:+9478728 MsG0680030795.01.T01:CDS
AAGAATTTCATCACTTTCGT+TGG 0.476706 6:+9478866 MsG0680030795.01.T01:CDS
CATGTGAGAATAGTATCTTC+AGG 0.482520 6:-9478896 None:intergenic
ATATCCACTGCAAGTCTGCT+GGG 0.487721 6:+9480089 MsG0680030795.01.T01:CDS
AGTTCTAAGGTGATAGGGAA+TGG 0.497376 6:+9479241 MsG0680030795.01.T01:CDS
AATTACAGGTGTTTCGGACC+GGG 0.506848 6:+9480780 MsG0680030795.01.T01:intron
ACCTTGGCTTGCTCAAAGAA+TGG 0.514250 6:+9480902 MsG0680030795.01.T01:CDS
GCCCATTTCACCCGTTTCGA+GGG 0.515455 6:-9480810 None:intergenic
TGCAGAGTTCTAAGGTGATA+GGG 0.520871 6:+9479236 MsG0680030795.01.T01:intron
TTGCTCAAAGAATGGCCATA+AGG 0.522742 6:+9480910 MsG0680030795.01.T01:CDS
GTTGAAGAATAAAGAAGCTG+AGG 0.523702 6:+9480839 MsG0680030795.01.T01:CDS
GTGATATCCTTATGATCGTC+CGG 0.527904 6:-9478805 None:intergenic
ACAATTGCAGGTTCCTTGGG+TGG 0.537665 6:+9479864 MsG0680030795.01.T01:CDS
GTTCTAAGGTGATAGGGAAT+GGG 0.539964 6:+9479242 MsG0680030795.01.T01:CDS
GCAAAGACCACTCTTCCAAA+AGG 0.543612 6:-9480514 None:intergenic
TTGTTATATTGAAGGAAGTG+TGG 0.550354 6:+9480024 MsG0680030795.01.T01:CDS
GGATATCACCGGGAATCTAC+CGG 0.553717 6:+9478819 MsG0680030795.01.T01:CDS
GACGATCATAAGGATATCAC+CGG 0.559355 6:+9478808 MsG0680030795.01.T01:CDS
TGTGGAAGTACGATTGTGGA+AGG 0.564913 6:+9479274 MsG0680030795.01.T01:CDS
GCCATTCTTTGAGCAAGCCA+AGG 0.565342 6:-9480903 None:intergenic
GATCATTGTATAAAGCCTGC+AGG 0.567045 6:+9480550 MsG0680030795.01.T01:CDS
AAATCTCCACATGAAAAGAC+TGG 0.568295 6:+9480133 MsG0680030795.01.T01:CDS
GTGGAAGTACGATTGTGGAA+GGG 0.576938 6:+9479275 MsG0680030795.01.T01:CDS
GTCCGGCGTGTGTTGCGAAG+TGG 0.578401 6:-9478788 None:intergenic
ATTGTATAAAGCCTGCAGGT+TGG 0.579551 6:+9480554 MsG0680030795.01.T01:CDS
TGTTAAGGACACTTGAAACA+TGG 0.586212 6:+9480957 MsG0680030795.01.T01:three_prime_UTR
TGAACCCAGCAGACTTGCAG+TGG 0.598635 6:-9480093 None:intergenic
CTACCGGCAACCACTTTACG+TGG 0.599044 6:+9478835 MsG0680030795.01.T01:CDS
CTGAAGATACTATTCTCACA+TGG 0.629930 6:+9478897 MsG0680030795.01.T01:CDS
CCTGCAGGTTGGAATAATTG+GGG 0.636584 6:+9480565 MsG0680030795.01.T01:CDS
TGGTTGTGGAAGTACGATTG+TGG 0.644197 6:+9479270 MsG0680030795.01.T01:CDS
GTAAAGTTACCTGCCACCCA+AGG 0.645790 6:-9479877 None:intergenic
TGCCACTTCGCAACACACGC+CGG 0.660864 6:+9478786 MsG0680030795.01.T01:CDS
GTGCTTGCTTCTATGAACAC+AGG 0.668340 6:+9480608 MsG0680030795.01.T01:CDS
ACGATCATAAGGATATCACC+GGG 0.677261 6:+9478809 MsG0680030795.01.T01:CDS
ATGTGCTATCACAGGCAATG+GGG 0.709383 6:+9480490 MsG0680030795.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTGTTTATAAATTAC+AGG + Chr6:9480766-9480785 MsG0680030795.01.T01:intron 10.0%
!! AATCTACAATTATATATTCT+AGG + Chr6:9480400-9480419 MsG0680030795.01.T01:intron 15.0%
!!! ATTAAAGCTTTTTAAGATTT+GGG - Chr6:9481020-9481039 None:intergenic 15.0%
!!! CAAATTTTCTATGTTTTTAT+TGG + Chr6:9479182-9479201 MsG0680030795.01.T01:intron 15.0%
!!! TATTAAAGCTTTTTAAGATT+TGG - Chr6:9481021-9481040 None:intergenic 15.0%
!!! TTTTACATATAAAGTGTAAA+TGG + Chr6:9480449-9480468 MsG0680030795.01.T01:intron 15.0%
!! AAATTAAATTATCCATGTGT+TGG - Chr6:9479063-9479082 None:intergenic 20.0%
!! ACAACAAAAATTACAAGTAA+TGG + Chr6:9478691-9478710 MsG0680030795.01.T01:exon 20.0%
!! ATTACATGTCTCTAAATATA+AGG + Chr6:9480657-9480676 MsG0680030795.01.T01:intron 20.0%
!! CATTCAGTAATATTAATTAG+GGG - Chr6:9480743-9480762 None:intergenic 20.0%
!! GCATTCAGTAATATTAATTA+GGG - Chr6:9480744-9480763 None:intergenic 20.0%
!! TGCATTCAGTAATATTAATT+AGG - Chr6:9480745-9480764 None:intergenic 20.0%
!! TTAAGAGATTGTTATATTGA+AGG + Chr6:9480016-9480035 MsG0680030795.01.T01:CDS 20.0%
!! TTTATAAATTACAGGTGTTT+CGG + Chr6:9480774-9480793 MsG0680030795.01.T01:intron 20.0%
!!! TAAGATTTGGGTTTTATTTT+AGG - Chr6:9481008-9481027 None:intergenic 20.0%
! AAAAATCTGCATAATGCTTA+TGG - Chr6:9479723-9479742 None:intergenic 25.0%
! ACACTAAAAAAACATAGACA+CGG + Chr6:9480213-9480232 MsG0680030795.01.T01:intron 25.0%
! CATAATTTCTAAGCAGAATA+TGG - Chr6:9480939-9480958 None:intergenic 25.0%
! CATGAAAAATAAAGAAGGAA+AGG - Chr6:9479788-9479807 None:intergenic 25.0%
! CTATAATGTAATGAACCAAA+AGG - Chr6:9480426-9480445 None:intergenic 25.0%
! TATAAAGTGTAAATGGTTTG+TGG + Chr6:9480456-9480475 MsG0680030795.01.T01:intron 25.0%
! TATGGAGATACTACTTAATA+AGG - Chr6:9479705-9479724 None:intergenic 25.0%
! TCATTGACACTTTAAATTGA+AGG - Chr6:9480365-9480384 None:intergenic 25.0%
! TCTGCTTAGAAATTATGTTA+AGG + Chr6:9480942-9480961 MsG0680030795.01.T01:exon 25.0%
! TTTCTTTCTCATTGCTTTAT+TGG + Chr6:9479515-9479534 MsG0680030795.01.T01:intron 25.0%
!! ATTATATATTCTAGGCCTTT+TGG + Chr6:9480408-9480427 MsG0680030795.01.T01:intron 25.0%
!! TATATGTTAGTGTTTTCTGA+TGG + Chr6:9479347-9479366 MsG0680030795.01.T01:intron 25.0%
!! TTTTTCATTGTTTATGATGC+AGG + Chr6:9479961-9479980 MsG0680030795.01.T01:intron 25.0%
!!! CTTTCCTTCTTTATTTTTCA+TGG + Chr6:9479786-9479805 MsG0680030795.01.T01:intron 25.0%
!!! CTTTTGGTTCATTACATTAT+AGG + Chr6:9480424-9480443 MsG0680030795.01.T01:intron 25.0%
!!! TTGATGGTGATCAATTTTAT+TGG - Chr6:9478933-9478952 None:intergenic 25.0%
AAAACACTAACATATACCTC+AGG - Chr6:9479343-9479362 None:intergenic 30.0%
AAAATTGATCACCATCAAGT+AGG + Chr6:9478935-9478954 MsG0680030795.01.T01:intron 30.0%
AAGAATTTCATCACTTTCGT+TGG + Chr6:9478866-9478885 MsG0680030795.01.T01:CDS 30.0%
ATTTGTGTTAGTGCTTCATA+GGG + Chr6:9479123-9479142 MsG0680030795.01.T01:intron 30.0%
CAAACTATGAAATGTGTGTA+CGG + Chr6:9479000-9479019 MsG0680030795.01.T01:intron 30.0%
CACTAAAAAAACATAGACAC+GGG + Chr6:9480214-9480233 MsG0680030795.01.T01:intron 30.0%
CCAGTAATAGTTTGAGAAAA+TGG + Chr6:9480264-9480283 MsG0680030795.01.T01:intron 30.0%
CTCTATATTGTGAGAAAATG+TGG + Chr6:9479381-9479400 MsG0680030795.01.T01:intron 30.0%
CTCTTGATGTATTTGTTCAT+AGG + Chr6:9479901-9479920 MsG0680030795.01.T01:intron 30.0%
GGTCTTTGCATTTACTTATA+TGG + Chr6:9480528-9480547 MsG0680030795.01.T01:CDS 30.0%
GTTGGAACAAGAATTTGAAA+AGG + Chr6:9479930-9479949 MsG0680030795.01.T01:intron 30.0%
TGATATCCAACATGTATCAT+TGG - Chr6:9480336-9480355 None:intergenic 30.0%
TTCATAATGTTACTCATGCT+TGG - Chr6:9481052-9481071 None:intergenic 30.0%
TTCTTTATTCTTCAACACTC+TGG - Chr6:9480835-9480854 None:intergenic 30.0%
TTGTTATATTGAAGGAAGTG+TGG + Chr6:9480024-9480043 MsG0680030795.01.T01:CDS 30.0%
TTTGTTCATAGGTTAGATGT+TGG + Chr6:9479912-9479931 MsG0680030795.01.T01:intron 30.0%
! AGAATTTGAGGTTATTGCAA+CGG - Chr6:9479425-9479444 None:intergenic 30.0%
! CCATTTTCTCAAACTATTAC+TGG - Chr6:9480267-9480286 None:intergenic 30.0%
! GACACACTTTATTTACATTC+TGG + Chr6:9479983-9480002 MsG0680030795.01.T01:CDS 30.0%
!! AGACTGGTTATGTATTTTTG+AGG + Chr6:9480149-9480168 MsG0680030795.01.T01:CDS 30.0%
!! CTCAAATTCTTTGAAGTTGA+GGG + Chr6:9479435-9479454 MsG0680030795.01.T01:intron 30.0%
!! TTGATTTGCAGTCAAAATTG+TGG + Chr6:9479672-9479691 MsG0680030795.01.T01:intron 30.0%
!! TTTTGAGAATTTTTCTCCTG+AGG + Chr6:9479324-9479343 MsG0680030795.01.T01:CDS 30.0%
!!! CTTCTTTATTTTTCATGGCA+GGG + Chr6:9479791-9479810 MsG0680030795.01.T01:intron 30.0%
AAATCTCCACATGAAAAGAC+TGG + Chr6:9480133-9480152 MsG0680030795.01.T01:CDS 35.0%
AAATGCATGAACCTACTTGA+TGG - Chr6:9478949-9478968 None:intergenic 35.0%
AGCAGAATATGGAATCCTTA+TGG - Chr6:9480928-9480947 None:intergenic 35.0%
ATTTCTTCGTTTGAGGAAGT+GGG + Chr6:9479146-9479165 MsG0680030795.01.T01:intron 35.0%
CATGTGAGAATAGTATCTTC+AGG - Chr6:9478899-9478918 None:intergenic 35.0%
CCTCAACTTCAAAGAATTTG+AGG - Chr6:9479437-9479456 None:intergenic 35.0%
CCTGCCATGAAAAATAAAGA+AGG - Chr6:9479793-9479812 None:intergenic 35.0%
CTGAAGATACTATTCTCACA+TGG + Chr6:9478897-9478916 MsG0680030795.01.T01:CDS 35.0%
GATTTGTGTTAGTGCTTCAT+AGG + Chr6:9479122-9479141 MsG0680030795.01.T01:intron 35.0%
GTTGAAGAATAAAGAAGCTG+AGG + Chr6:9480839-9480858 MsG0680030795.01.T01:CDS 35.0%
TGTGACACTGTCAATACAAA+AGG - Chr6:9478719-9478738 None:intergenic 35.0%
TGTTAAGGACACTTGAAACA+TGG + Chr6:9480957-9480976 MsG0680030795.01.T01:three_prime_UTR 35.0%
TTTACAATTGCAGGTTCCTT+GGG + Chr6:9479861-9479880 MsG0680030795.01.T01:CDS 35.0%
! ACATAACCAGTCTTTTCATG+TGG - Chr6:9480142-9480161 None:intergenic 35.0%
! CGGAGTGCAATTTAAAACTA+TGG + Chr6:9479474-9479493 MsG0680030795.01.T01:intron 35.0%
! CTGCATTTTCCACAATATCA+AGG - Chr6:9479590-9479609 None:intergenic 35.0%
! GATGTGCATTTTACAATTGC+AGG + Chr6:9479852-9479871 MsG0680030795.01.T01:CDS 35.0%
! GTATTGACAGTGTCACAAAA+TGG + Chr6:9478722-9478741 MsG0680030795.01.T01:CDS 35.0%
! TTTTACAATTGCAGGTTCCT+TGG + Chr6:9479860-9479879 MsG0680030795.01.T01:CDS 35.0%
!! CCTCAAATTCTTTGAAGTTG+AGG + Chr6:9479434-9479453 MsG0680030795.01.T01:intron 35.0%
!!! CCTTCTTTATTTTTCATGGC+AGG + Chr6:9479790-9479809 MsG0680030795.01.T01:intron 35.0%
AAATTACAGGTGTTTCGGAC+CGG + Chr6:9480779-9480798 MsG0680030795.01.T01:intron 40.0%
ACAGTGTCACAAAATGGAAC+AGG + Chr6:9478728-9478747 MsG0680030795.01.T01:CDS 40.0%
ACGATCATAAGGATATCACC+GGG + Chr6:9478809-9478828 MsG0680030795.01.T01:CDS 40.0%
ATCCAGAACCACAAAAACCT+TGG + Chr6:9480886-9480905 MsG0680030795.01.T01:CDS 40.0%
ATTGTATAAAGCCTGCAGGT+TGG + Chr6:9480554-9480573 MsG0680030795.01.T01:CDS 40.0%
CAACCATATGACACTAGACT+TGG - Chr6:9480182-9480201 None:intergenic 40.0%
CATAGGGATTTCTTCGTTTG+AGG + Chr6:9479139-9479158 MsG0680030795.01.T01:intron 40.0%
GACGATCATAAGGATATCAC+CGG + Chr6:9478808-9478827 MsG0680030795.01.T01:CDS 40.0%
GATCATTGTATAAAGCCTGC+AGG + Chr6:9480550-9480569 MsG0680030795.01.T01:CDS 40.0%
GATTACAGATGTGCTATCAC+AGG + Chr6:9480482-9480501 MsG0680030795.01.T01:intron 40.0%
GATTTCTTCGTTTGAGGAAG+TGG + Chr6:9479145-9479164 MsG0680030795.01.T01:intron 40.0%
GTGATATCCTTATGATCGTC+CGG - Chr6:9478808-9478827 None:intergenic 40.0%
TAGCACGACATATATGCATG+TGG - Chr6:9480306-9480325 None:intergenic 40.0%
TGACCAAGTCTAGTGTCATA+TGG + Chr6:9480176-9480195 MsG0680030795.01.T01:intron 40.0%
TGTCACGATCCTTGATATTG+TGG + Chr6:9479578-9479597 MsG0680030795.01.T01:intron 40.0%
TGTCAGCCAATGATACATGT+TGG + Chr6:9480327-9480346 MsG0680030795.01.T01:intron 40.0%
TTGCTCAAAGAATGGCCATA+AGG + Chr6:9480910-9480929 MsG0680030795.01.T01:CDS 40.0%
! ATTTTTCATGGCAGGGTTCA+GGG + Chr6:9479798-9479817 MsG0680030795.01.T01:intron 40.0%
! GTTGTTGTTGCAGAGTTCTA+AGG + Chr6:9479228-9479247 MsG0680030795.01.T01:intron 40.0%
! TATTTTTCATGGCAGGGTTC+AGG + Chr6:9479797-9479816 MsG0680030795.01.T01:intron 40.0%
! TTAGTCTTTGCCACGTAAAG+TGG - Chr6:9478848-9478867 None:intergenic 40.0%
!! AGTTCTAAGGTGATAGGGAA+TGG + Chr6:9479241-9479260 MsG0680030795.01.T01:CDS 40.0%
!! GGAAGTGTGGACTTCATTTT+TGG + Chr6:9480037-9480056 MsG0680030795.01.T01:CDS 40.0%
!! GTTCTAAGGTGATAGGGAAT+GGG + Chr6:9479242-9479261 MsG0680030795.01.T01:CDS 40.0%
!! TGCAGAGTTCTAAGGTGATA+GGG + Chr6:9479236-9479255 MsG0680030795.01.T01:intron 40.0%
!! TTGCAGAGTTCTAAGGTGAT+AGG + Chr6:9479235-9479254 MsG0680030795.01.T01:intron 40.0%
AATTACAGGTGTTTCGGACC+GGG + Chr6:9480780-9480799 MsG0680030795.01.T01:intron 45.0%
ACCAACACAACACCAACACA+TGG + Chr6:9479048-9479067 MsG0680030795.01.T01:intron 45.0%
AGATGTGCTATCACAGGCAA+TGG + Chr6:9480488-9480507 MsG0680030795.01.T01:intron 45.0%
ATATCCACTGCAAGTCTGCT+GGG + Chr6:9480089-9480108 MsG0680030795.01.T01:CDS 45.0%
ATGTGCTATCACAGGCAATG+GGG + Chr6:9480490-9480509 MsG0680030795.01.T01:intron 45.0%
CCACAATACGACTGCAATTG+AGG - Chr6:9479632-9479651 None:intergenic 45.0%
CCTCAATTGCAGTCGTATTG+TGG + Chr6:9479629-9479648 MsG0680030795.01.T01:intron 45.0%
GACTGCAATTGAGGTTGTGT+CGG - Chr6:9479623-9479642 None:intergenic 45.0%
GATGTGCTATCACAGGCAAT+GGG + Chr6:9480489-9480508 MsG0680030795.01.T01:intron 45.0%
GCAAAGACCACTCTTCCAAA+AGG - Chr6:9480517-9480536 None:intergenic 45.0%
GTGAGAAAATGTGGCTGATG+CGG + Chr6:9479390-9479409 MsG0680030795.01.T01:intron 45.0%
GTGCTTGCTTCTATGAACAC+AGG + Chr6:9480608-9480627 MsG0680030795.01.T01:CDS 45.0%
TGCAGTCAAAATTGTGGTCG+CGG + Chr6:9479678-9479697 MsG0680030795.01.T01:intron 45.0%
! AAGTTGAGGGTGCAATTGTG+TGG + Chr6:9479448-9479467 MsG0680030795.01.T01:intron 45.0%
! AGCCAAGGTTTTTGTGGTTC+TGG - Chr6:9480891-9480910 None:intergenic 45.0%
! AGCCTGCAGGTTGGAATAAT+TGG + Chr6:9480563-9480582 MsG0680030795.01.T01:CDS 45.0%
! CCTGCAGGTTGGAATAATTG+GGG + Chr6:9480565-9480584 MsG0680030795.01.T01:CDS 45.0%
! GCCTGCAGGTTGGAATAATT+GGG + Chr6:9480564-9480583 MsG0680030795.01.T01:CDS 45.0%
! GTGATAGGGAATGGGACTTT+TGG + Chr6:9479250-9479269 MsG0680030795.01.T01:CDS 45.0%
! GTGGAAGTACGATTGTGGAA+GGG + Chr6:9479275-9479294 MsG0680030795.01.T01:CDS 45.0%
! TGAGCAAGCCAAGGTTTTTG+TGG - Chr6:9480897-9480916 None:intergenic 45.0%
! TGGAAGTACGATTGTGGAAG+GGG + Chr6:9479276-9479295 MsG0680030795.01.T01:CDS 45.0%
! TGGTTGTGGAAGTACGATTG+TGG + Chr6:9479270-9479289 MsG0680030795.01.T01:CDS 45.0%
! TGTGGAAGTACGATTGTGGA+AGG + Chr6:9479274-9479293 MsG0680030795.01.T01:CDS 45.0%
!! ACCTTGGCTTGCTCAAAGAA+TGG + Chr6:9480902-9480921 MsG0680030795.01.T01:CDS 45.0%
!! TCCATGTGTTGGTGTTGTGT+TGG - Chr6:9479052-9479071 None:intergenic 45.0%
!! TGTTGTGTTGGTGTCACACA+CGG - Chr6:9479040-9479059 None:intergenic 45.0%
!!! ATTTATAACATTTTTTTAAT+AGG - Chr6:9480683-9480702 None:intergenic 5.0%
ACAATTGCAGGTTCCTTGGG+TGG + Chr6:9479864-9479883 MsG0680030795.01.T01:CDS 50.0%
AGGGTGCAATTGTGTGGTTG+CGG + Chr6:9479454-9479473 MsG0680030795.01.T01:intron 50.0%
CATATCCACTGCAAGTCTGC+TGG + Chr6:9480088-9480107 MsG0680030795.01.T01:CDS 50.0%
CCCCAATTATTCCAACCTGC+AGG - Chr6:9480568-9480587 None:intergenic 50.0%
CGTTTCGAGGGACAAAAACC+CGG - Chr6:9480801-9480820 None:intergenic 50.0%
GCCATTCTTTGAGCAAGCCA+AGG - Chr6:9480906-9480925 None:intergenic 50.0%
GGATATCACCGGGAATCTAC+CGG + Chr6:9478819-9478838 MsG0680030795.01.T01:CDS 50.0%
GTAAAGTTACCTGCCACCCA+AGG - Chr6:9479880-9479899 None:intergenic 50.0%
TCCCTCGAAACGGGTGAAAT+GGG + Chr6:9480809-9480828 MsG0680030795.01.T01:CDS 50.0%
TGGCAATAGCACTGCACTCT+TGG + Chr6:9480057-9480076 MsG0680030795.01.T01:CDS 50.0%
TGTCACACACGGTCACATGT+GGG - Chr6:9479029-9479048 None:intergenic 50.0%
TTGCCACGTAAAGTGGTTGC+CGG - Chr6:9478841-9478860 None:intergenic 50.0%
! CGGGTTTTTGTCCCTCGAAA+CGG + Chr6:9480799-9480818 MsG0680030795.01.T01:CDS 50.0%
! GGGTTTTTGTCCCTCGAAAC+GGG + Chr6:9480800-9480819 MsG0680030795.01.T01:CDS 50.0%
!! ATGGGGACCTTTTGGAAGAG+TGG + Chr6:9480507-9480526 MsG0680030795.01.T01:CDS 50.0%
!! GGGAATGGGACTTTTGGTTG+TGG + Chr6:9479256-9479275 MsG0680030795.01.T01:CDS 50.0%
ACACACGCCGGACGATCATA+AGG + Chr6:9478798-9478817 MsG0680030795.01.T01:CDS 55.0%
AGTGGTTGCCGGTAGATTCC+CGG - Chr6:9478830-9478849 None:intergenic 55.0%
CTACCGGCAACCACTTTACG+TGG + Chr6:9478835-9478854 MsG0680030795.01.T01:CDS 55.0%
GCCCATTTCACCCGTTTCGA+GGG - Chr6:9480813-9480832 None:intergenic 55.0%
GTCCCTCGAAACGGGTGAAA+TGG + Chr6:9480808-9480827 MsG0680030795.01.T01:CDS 55.0%
GTGTCACACACGGTCACATG+TGG - Chr6:9479030-9479049 None:intergenic 55.0%
TGAACCCAGCAGACTTGCAG+TGG - Chr6:9480096-9480115 None:intergenic 55.0%
! CACAGGCAATGGGGACCTTT+TGG + Chr6:9480499-9480518 MsG0680030795.01.T01:intron 55.0%
GGCCCATTTCACCCGTTTCG+AGG - Chr6:9480814-9480833 None:intergenic 60.0%
TTGCAGGTTCCTTGGGTGGC+AGG + Chr6:9479868-9479887 MsG0680030795.01.T01:CDS 60.0%
! TGCCACTTCGCAACACACGC+CGG + Chr6:9478786-9478805 MsG0680030795.01.T01:CDS 60.0%
GTCCGGCGTGTGTTGCGAAG+TGG - Chr6:9478791-9478810 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 9478689 9481085 9478689 ID=MsG0680030795.01;Name=MsG0680030795.01
Chr6 mRNA 9478689 9481085 9478689 ID=MsG0680030795.01.T01;Parent=MsG0680030795.01;Name=MsG0680030795.01.T01;_AED=0.31;_eAED=0.31;_QI=21|0.8|0.66|1|1|1|6|135|300
Chr6 exon 9478689 9478952 9478689 ID=MsG0680030795.01.T01:exon:7512;Parent=MsG0680030795.01.T01
Chr6 exon 9479241 9479345 9479241 ID=MsG0680030795.01.T01:exon:7513;Parent=MsG0680030795.01.T01
Chr6 exon 9479812 9479889 9479812 ID=MsG0680030795.01.T01:exon:7514;Parent=MsG0680030795.01.T01
Chr6 exon 9479983 9480170 9479983 ID=MsG0680030795.01.T01:exon:7515;Parent=MsG0680030795.01.T01
Chr6 exon 9480504 9480629 9480504 ID=MsG0680030795.01.T01:exon:7516;Parent=MsG0680030795.01.T01
Chr6 exon 9480788 9481085 9480788 ID=MsG0680030795.01.T01:exon:7517;Parent=MsG0680030795.01.T01
Chr6 five_prime_UTR 9478689 9478709 9478689 ID=MsG0680030795.01.T01:five_prime_utr;Parent=MsG0680030795.01.T01
Chr6 CDS 9478710 9478952 9478710 ID=MsG0680030795.01.T01:cds;Parent=MsG0680030795.01.T01
Chr6 CDS 9479241 9479345 9479241 ID=MsG0680030795.01.T01:cds;Parent=MsG0680030795.01.T01
Chr6 CDS 9479812 9479889 9479812 ID=MsG0680030795.01.T01:cds;Parent=MsG0680030795.01.T01
Chr6 CDS 9479983 9480170 9479983 ID=MsG0680030795.01.T01:cds;Parent=MsG0680030795.01.T01
Chr6 CDS 9480504 9480629 9480504 ID=MsG0680030795.01.T01:cds;Parent=MsG0680030795.01.T01
Chr6 CDS 9480788 9480950 9480788 ID=MsG0680030795.01.T01:cds;Parent=MsG0680030795.01.T01
Chr6 three_prime_UTR 9480951 9481085 9480951 ID=MsG0680030795.01.T01:three_prime_utr;Parent=MsG0680030795.01.T01
Gene Sequence

>MsG0680030795.01.T01

ATGGCACCTTTTGTATTGACAGTGTCACAAAATGGAACAGGAAACTATAGAACTGTACAAGAAGCTATTGATGCTGTGCCACTTCGCAACACACGCCGGACGATCATAAGGATATCACCGGGAATCTACCGGCAACCACTTTACGTGGCAAAGACTAAGAATTTCATCACTTTCGTTGGTTTGTGTCCTGAAGATACTATTCTCACATGGAACAACACTGCCAATAAAATTGATCACCATCAAAGTTCTAAGGTGATAGGGAATGGGACTTTTGGTTGTGGAAGTACGATTGTGGAAGGGGAAGACTTTATTGCTGAGAATATTACTTTTGAGAATTTTTCTCCTGAGGGTTCAGGGCAAGCAGTAGCAGTTAGAGTAACAGCAGATAGATGTGCATTTTACAATTGCAGGTTCCTTGGGTGGCAGGACACACTTTATTTACATTCTGGCAAACAATATTTAAGAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGCAATAGCACTGCACTCTTGGAACATTGTCATATCCACTGCAAGTCTGCTGGGTTCATAACTGCTCAGAGTAGAAAATCTCCACATGAAAAGACTGGTTATGTATTTTTGAGGCAATGGGGACCTTTTGGAAGAGTGGTCTTTGCATTTACTTATATGGATCATTGTATAAAGCCTGCAGGTTGGAATAATTGGGGAAAAGTTGAGAATGAAAAAAGTGCTTGCTTCTATGAACACAGGTGTTTCGGACCGGGTTTTTGTCCCTCGAAACGGGTGAAATGGGCCAGAGTGTTGAAGAATAAAGAAGCTGAGGAGTTTCTCATGCATAGTTTCATTGATCCAGAACCACAAAAACCTTGGCTTGCTCAAAGAATGGCCATAAGGATTCCATATTCTGCTTAG

Protein sequence

>MsG0680030795.01.T01

MAPFVLTVSQNGTGNYRTVQEAIDAVPLRNTRRTIIRISPGIYRQPLYVAKTKNFITFVGLCPEDTILTWNNTANKIDHHQSSKVIGNGTFGCGSTIVEGEDFIAENITFENFSPEGSGQAVAVRVTADRCAFYNCRFLGWQDTLYLHSGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGYVFLRQWGPFGRVVFAFTYMDHCIKPAGWNNWGKVENEKSACFYEHRCFGPGFCPSKRVKWARVLKNKEAEEFLMHSFIDPEPQKPWLAQRMAIRIPYSA*