Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034750.01.T01 | XP_013452758.1 | 98.276 | 174 | 3 | 0 | 1 | 174 | 6 | 179 | 6.85E-126 | 361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034750.01.T01 | A2XLF4 | 47.701 | 174 | 55 | 3 | 13 | 153 | 11 | 181 | 3.94E-41 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034750.01.T01 | A0A072UBE0 | 98.276 | 174 | 3 | 0 | 1 | 174 | 6 | 179 | 3.27e-126 | 361 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0680034750.01.T01 | TF | zf-HD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0680034750.01 | 0.839798 | 1.277094e-57 | 1.783290e-54 |
| MsG0180000292.01 | MsG0680034750.01 | 0.811311 | 7.460361e-51 | 4.602305e-48 |
| MsG0180003741.01 | MsG0680034750.01 | 0.836895 | 7.157347e-57 | 9.144845e-54 |
| MsG0180005485.01 | MsG0680034750.01 | 0.804153 | 2.476750e-49 | 1.267707e-46 |
| MsG0680030784.01 | MsG0680034750.01 | 0.809691 | 1.669708e-50 | 9.869686e-48 |
| MsG0680030908.01 | MsG0680034750.01 | 0.810872 | 9.286523e-51 | 5.663261e-48 |
| MsG0680032651.01 | MsG0680034750.01 | 0.809017 | 2.328764e-50 | 1.351969e-47 |
| MsG0680034750.01 | MsG0780037395.01 | 0.800122 | 1.671623e-48 | 7.721204e-46 |
| MsG0680034750.01 | MsG0780040846.01 | 0.806805 | 6.882096e-50 | 3.770784e-47 |
| MsG0680034750.01 | MsG0780041259.01 | 0.828207 | 1.022137e-54 | 1.009190e-51 |
| MsG0680034750.01 | MsG0780041698.01 | 0.812724 | 3.670462e-51 | 2.351470e-48 |
| MsG0680034750.01 | MsG0880042555.01 | 0.807370 | 5.224874e-50 | 2.905007e-47 |
| MsG0680034750.01 | MsG0880042958.01 | 0.816941 | 4.264535e-52 | 3.063969e-49 |
| MsG0680034750.01 | MsG0880042959.01 | 0.819948 | 8.880118e-53 | 6.931731e-50 |
| MsG0680034750.01 | MsG0880044704.01 | 0.815792 | 7.710289e-52 | 5.368057e-49 |
| MsG0480019221.01 | MsG0680034750.01 | 0.815843 | 7.509577e-52 | 5.234998e-49 |
| MsG0480019340.01 | MsG0680034750.01 | 0.826689 | 2.363789e-54 | 2.232673e-51 |
| MsG0480020315.01 | MsG0680034750.01 | 0.836591 | 8.554706e-57 | 1.082993e-53 |
| MsG0480020517.01 | MsG0680034750.01 | 0.854885 | 9.134854e-62 | 2.070435e-58 |
| MsG0480020783.01 | MsG0680034750.01 | 0.825932 | 3.579481e-54 | 3.309096e-51 |
| MsG0480021060.01 | MsG0680034750.01 | 0.805177 | 1.514031e-49 | 7.956474e-47 |
| MsG0580024443.01 | MsG0680034750.01 | 0.806588 | 7.645961e-50 | 4.165919e-47 |
| MsG0580025607.01 | MsG0680034750.01 | 0.833776 | 4.391800e-56 | 5.109258e-53 |
| MsG0580025668.01 | MsG0680034750.01 | 0.853537 | 2.238291e-61 | 4.852422e-58 |
| MsG0580025828.01 | MsG0680034750.01 | 0.857381 | 1.696438e-62 | 4.178978e-59 |
| MsG0380015645.01 | MsG0680034750.01 | 0.806302 | 8.787252e-50 | 4.752968e-47 |
| MsG0380016192.01 | MsG0680034750.01 | 0.820528 | 6.542065e-53 | 5.189126e-50 |
| MsG0380016864.01 | MsG0680034750.01 | 0.821946 | 3.081065e-53 | 2.542815e-50 |
| MsG0380017087.01 | MsG0680034750.01 | 0.806129 | 9.553826e-50 | 5.144990e-47 |
| MsG0380017088.01 | MsG0680034750.01 | 0.817361 | 3.431683e-52 | 2.493863e-49 |
| MsG0480018200.01 | MsG0680034750.01 | 0.807949 | 3.937616e-50 | 2.222556e-47 |
| MsG0580026179.01 | MsG0680034750.01 | 0.803030 | 4.234645e-49 | 2.105812e-46 |
| MsG0580027763.01 | MsG0680034750.01 | 0.829910 | 3.951992e-55 | 4.101064e-52 |
| MsG0580029310.01 | MsG0680034750.01 | 0.837961 | 3.816441e-57 | 5.038083e-54 |
| MsG0280007075.01 | MsG0680034750.01 | 0.812155 | 4.886724e-51 | 3.083537e-48 |
| MsG0280007750.01 | MsG0680034750.01 | 0.812717 | 3.683336e-51 | 2.359235e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034750.01.T01 | MTR_6g073013 | 98.276 | 174 | 3 | 0 | 1 | 174 | 6 | 179 | 8.29e-130 | 361 |
| MsG0680034750.01.T01 | MTR_7g010300 | 38.776 | 196 | 61 | 5 | 14 | 155 | 88 | 278 | 7.23e-39 | 135 |
| MsG0680034750.01.T01 | MTR_1g077020 | 35.795 | 176 | 77 | 5 | 14 | 155 | 9 | 182 | 4.00e-34 | 119 |
| MsG0680034750.01.T01 | MTR_5g032600 | 36.979 | 192 | 69 | 4 | 14 | 155 | 78 | 267 | 2.17e-32 | 117 |
| MsG0680034750.01.T01 | MTR_2g076780 | 32.701 | 211 | 82 | 6 | 1 | 155 | 26 | 232 | 1.77e-31 | 114 |
| MsG0680034750.01.T01 | MTR_6g012280 | 35.071 | 211 | 80 | 7 | 14 | 171 | 91 | 297 | 1.42e-29 | 110 |
| MsG0680034750.01.T01 | MTR_8g069080 | 32.057 | 209 | 85 | 5 | 2 | 155 | 57 | 263 | 4.05e-29 | 108 |
| MsG0680034750.01.T01 | MTR_3g100650 | 32.292 | 192 | 78 | 5 | 14 | 155 | 80 | 269 | 2.50e-26 | 101 |
| MsG0680034750.01.T01 | MTR_8g467340 | 56.338 | 71 | 30 | 1 | 96 | 166 | 271 | 340 | 2.74e-22 | 92.4 |
| MsG0680034750.01.T01 | MTR_8g467340 | 66.667 | 51 | 16 | 1 | 14 | 63 | 64 | 114 | 5.31e-17 | 77.8 |
| MsG0680034750.01.T01 | MTR_4g134580 | 56.667 | 60 | 25 | 1 | 96 | 155 | 284 | 342 | 5.95e-20 | 85.5 |
| MsG0680034750.01.T01 | MTR_4g134580 | 62.000 | 50 | 18 | 1 | 14 | 63 | 113 | 161 | 5.16e-15 | 72.0 |
| MsG0680034750.01.T01 | MTR_5g020510 | 56.667 | 60 | 25 | 1 | 96 | 155 | 233 | 291 | 1.69e-19 | 83.6 |
| MsG0680034750.01.T01 | MTR_5g020510 | 61.538 | 52 | 15 | 2 | 14 | 63 | 99 | 147 | 9.83e-16 | 73.2 |
| MsG0680034750.01.T01 | MTR_8g051480 | 33.600 | 125 | 68 | 3 | 44 | 155 | 2 | 124 | 1.19e-17 | 75.1 |
| MsG0680034750.01.T01 | MTR_5g065440 | 53.125 | 64 | 29 | 1 | 92 | 155 | 201 | 263 | 2.23e-16 | 74.7 |
| MsG0680034750.01.T01 | MTR_5g065440 | 56.000 | 50 | 21 | 1 | 14 | 63 | 58 | 106 | 8.21e-12 | 62.4 |
| MsG0680034750.01.T01 | MTR_3g039810 | 50.794 | 63 | 30 | 1 | 1 | 63 | 7 | 68 | 2.36e-15 | 67.8 |
| MsG0680034750.01.T01 | MTR_8g069380 | 39.474 | 76 | 45 | 1 | 81 | 156 | 37 | 111 | 1.66e-14 | 66.6 |
| MsG0680034750.01.T01 | MTR_8g442330 | 33.594 | 128 | 67 | 5 | 23 | 134 | 14 | 139 | 2.16e-14 | 67.0 |
| MsG0680034750.01.T01 | MTR_6g012220 | 60.000 | 50 | 15 | 1 | 14 | 63 | 21 | 65 | 2.46e-14 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034750.01.T01 | AT1G14440 | 41.270 | 189 | 58 | 6 | 14 | 153 | 90 | 274 | 1.40e-40 | 139 |
| MsG0680034750.01.T01 | AT1G14440 | 41.270 | 189 | 58 | 6 | 14 | 153 | 90 | 274 | 1.40e-40 | 139 |
| MsG0680034750.01.T01 | AT2G02540 | 35.981 | 214 | 75 | 5 | 14 | 167 | 87 | 298 | 3.43e-40 | 138 |
| MsG0680034750.01.T01 | AT2G02540 | 35.981 | 214 | 75 | 5 | 14 | 167 | 87 | 298 | 3.43e-40 | 138 |
| MsG0680034750.01.T01 | AT4G24660 | 42.012 | 169 | 69 | 3 | 14 | 155 | 49 | 215 | 2.53e-39 | 133 |
| MsG0680034750.01.T01 | AT4G24660 | 42.012 | 169 | 69 | 3 | 14 | 155 | 49 | 215 | 3.66e-39 | 133 |
| MsG0680034750.01.T01 | AT2G18350 | 40.678 | 177 | 68 | 5 | 14 | 155 | 82 | 256 | 5.87e-39 | 134 |
| MsG0680034750.01.T01 | AT5G65410 | 39.779 | 181 | 68 | 5 | 12 | 155 | 73 | 249 | 1.36e-38 | 133 |
| MsG0680034750.01.T01 | AT1G69600 | 39.894 | 188 | 69 | 6 | 14 | 158 | 31 | 217 | 3.83e-35 | 123 |
| MsG0680034750.01.T01 | AT3G28920 | 38.500 | 200 | 64 | 5 | 14 | 155 | 52 | 250 | 8.19e-35 | 124 |
| MsG0680034750.01.T01 | AT5G15210 | 37.634 | 186 | 68 | 5 | 14 | 155 | 56 | 237 | 1.17e-34 | 123 |
| MsG0680034750.01.T01 | AT5G42780 | 37.368 | 190 | 79 | 4 | 1 | 154 | 51 | 236 | 3.28e-34 | 121 |
| MsG0680034750.01.T01 | AT5G60480 | 39.412 | 170 | 72 | 5 | 13 | 153 | 36 | 203 | 9.43e-33 | 116 |
| MsG0680034750.01.T01 | AT3G50890 | 38.220 | 191 | 76 | 4 | 14 | 164 | 60 | 248 | 6.14e-31 | 112 |
| MsG0680034750.01.T01 | AT1G14687 | 38.554 | 166 | 72 | 5 | 13 | 154 | 6 | 165 | 2.47e-30 | 108 |
| MsG0680034750.01.T01 | AT1G75240 | 60.000 | 70 | 23 | 2 | 96 | 165 | 240 | 304 | 1.03e-23 | 95.1 |
| MsG0680034750.01.T01 | AT1G75240 | 62.000 | 50 | 18 | 1 | 14 | 63 | 76 | 124 | 1.35e-14 | 70.5 |
| MsG0680034750.01.T01 | AT5G39760 | 54.839 | 62 | 27 | 1 | 94 | 155 | 198 | 258 | 3.55e-18 | 80.5 |
| MsG0680034750.01.T01 | AT5G39760 | 48.649 | 74 | 37 | 1 | 12 | 84 | 54 | 127 | 2.34e-15 | 72.8 |
| MsG0680034750.01.T01 | AT1G74660 | 56.604 | 53 | 22 | 1 | 11 | 63 | 36 | 87 | 2.26e-15 | 68.6 |
| MsG0680034750.01.T01 | AT1G74660 | 56.604 | 53 | 22 | 1 | 11 | 63 | 36 | 87 | 4.76e-15 | 67.8 |
| MsG0680034750.01.T01 | AT3G28917 | 54.000 | 50 | 23 | 0 | 14 | 63 | 33 | 82 | 3.69e-14 | 65.5 |
| MsG0680034750.01.T01 | AT1G18835 | 54.717 | 53 | 20 | 1 | 11 | 63 | 23 | 71 | 1.65e-13 | 63.2 |
Find 51 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGGGTTTGCCGAGAAGTT+AGG | 0.313045 | 6:+93921568 | MsG0680034750.01.T01:CDS |
| GGAGGAGGTAGTGGAGGAGA+TGG | 0.351040 | 6:+93921493 | MsG0680034750.01.T01:CDS |
| GAGGAGATGGGAGGAGGAAG+AGG | 0.371577 | 6:+93921506 | MsG0680034750.01.T01:CDS |
| CAATTTCCACCCTAACTTCT+CGG | 0.379602 | 6:-93921578 | None:intergenic |
| GAATTAGCATTACCAGTAGA+AGG | 0.429521 | 6:-93921721 | None:intergenic |
| GAGGAGGTAGTGGAGGAGAT+GGG | 0.433503 | 6:+93921494 | MsG0680034750.01.T01:CDS |
| GAGGTAGTGGAGGAGATGGG+AGG | 0.435653 | 6:+93921497 | MsG0680034750.01.T01:CDS |
| GTAGTGGAGGAGATGGGAGG+AGG | 0.441484 | 6:+93921500 | MsG0680034750.01.T01:CDS |
| TGCCGCGGCCGCTGCAATGT+CGG | 0.446748 | 6:+93921447 | MsG0680034750.01.T01:CDS |
| TATTCCGGTGGAGGAGGTAG+TGG | 0.451652 | 6:+93921484 | MsG0680034750.01.T01:CDS |
| AGCCGCAGGCTGCACATTGG+AGG | 0.456002 | 6:-93921378 | None:intergenic |
| GCAAAATAACCGCGATCACA+AGG | 0.458670 | 6:+93921419 | MsG0680034750.01.T01:CDS |
| AGAAACCATGCAGCAAGCCT+TGG | 0.459741 | 6:+93921289 | MsG0680034750.01.T01:CDS |
| CGTCGGTGGCGTAGCTTCCA+AGG | 0.465781 | 6:-93921306 | None:intergenic |
| GAAATTTACGCCGGATCAGA+AGG | 0.471585 | 6:+93921537 | MsG0680034750.01.T01:CDS |
| ATCCGACATTGCAGCGGCCG+CGG | 0.471777 | 6:-93921449 | None:intergenic |
| TGGGGTTTGCCGAGAAGTTA+GGG | 0.472374 | 6:+93921569 | MsG0680034750.01.T01:CDS |
| AATTCTTCTGATCCTTCTAC+TGG | 0.475357 | 6:+93921709 | MsG0680034750.01.T01:CDS |
| GATCAGTTGATGGAATATTC+CGG | 0.475527 | 6:+93921469 | MsG0680034750.01.T01:CDS |
| AGCTTCCAAGGCTTGCTGCA+TGG | 0.476710 | 6:-93921294 | None:intergenic |
| GAAGTTCCGGTGACAGCCGC+AGG | 0.479614 | 6:-93921392 | None:intergenic |
| ATGGGAGGAGGAAGAGGTAC+CGG | 0.496163 | 6:+93921512 | MsG0680034750.01.T01:CDS |
| TGCAATGTCGGATCAGTTGA+TGG | 0.497838 | 6:+93921459 | MsG0680034750.01.T01:CDS |
| ATCATCTTCTCCTTCTGATC+CGG | 0.499539 | 6:-93921547 | None:intergenic |
| GTGCAGCCTGCGGCTGTCAC+CGG | 0.504708 | 6:+93921386 | MsG0680034750.01.T01:CDS |
| GGATCAGAAGGAGAAGATGA+TGG | 0.514525 | 6:+93921549 | MsG0680034750.01.T01:CDS |
| AACTTGATGAAGAGATTGAA+AGG | 0.524348 | 6:+93921611 | MsG0680034750.01.T01:CDS |
| TCCTCCACTACCTCCTCCAC+CGG | 0.526819 | 6:-93921488 | None:intergenic |
| GATCAGAAGGAGAAGATGAT+GGG | 0.537307 | 6:+93921550 | MsG0680034750.01.T01:CDS |
| GATCCGGCGTAAATTTCGTC+CGG | 0.537660 | 6:-93921531 | None:intergenic |
| ATGGAATATTCCGGTGGAGG+AGG | 0.538823 | 6:+93921478 | MsG0680034750.01.T01:CDS |
| AGCTACGCCACCGACGGCTG+CGG | 0.539403 | 6:+93921313 | MsG0680034750.01.T01:CDS |
| TGGAGGCTGTTTATCGCGGA+TGG | 0.549396 | 6:-93921361 | None:intergenic |
| GAATTCACCGCAGCCGTCGG+TGG | 0.562401 | 6:-93921320 | None:intergenic |
| GGTGAATTCACCGCAGCCGT+CGG | 0.578066 | 6:-93921323 | None:intergenic |
| GACAGCCGCAGGCTGCACAT+TGG | 0.578845 | 6:-93921381 | None:intergenic |
| GGCACTCTCCCTTGTGATCG+CGG | 0.582002 | 6:-93921428 | None:intergenic |
| TCCGGTGGAGGAGGTAGTGG+AGG | 0.589804 | 6:+93921487 | MsG0680034750.01.T01:CDS |
| TTGATGGAATATTCCGGTGG+AGG | 0.592071 | 6:+93921475 | MsG0680034750.01.T01:CDS |
| CAAAATAACCGCGATCACAA+GGG | 0.605300 | 6:+93921420 | MsG0680034750.01.T01:CDS |
| GGATGGCGATGAGTCGTCGA+TGG | 0.613786 | 6:-93921344 | None:intergenic |
| CACACACTACTGAGTAAGAG+AGG | 0.616345 | 6:-93921743 | None:intergenic |
| AGCCTCCAATGTGCAGCCTG+CGG | 0.622915 | 6:+93921376 | MsG0680034750.01.T01:CDS |
| GATCACAAGGGAGAGTGCCG+CGG | 0.625206 | 6:+93921432 | MsG0680034750.01.T01:CDS |
| ACATTGGAGGCTGTTTATCG+CGG | 0.631854 | 6:-93921365 | None:intergenic |
| CTTGGAAGCTACGCCACCGA+CGG | 0.637476 | 6:+93921307 | MsG0680034750.01.T01:CDS |
| ATCAGAAGGAGAAGATGATG+GGG | 0.650841 | 6:+93921551 | MsG0680034750.01.T01:CDS |
| CAGTTGATGGAATATTCCGG+TGG | 0.694003 | 6:+93921472 | MsG0680034750.01.T01:CDS |
| CAACTGATCCGACATTGCAG+CGG | 0.694689 | 6:-93921455 | None:intergenic |
| GGTTTGCCGAGAAGTTAGGG+TGG | 0.718936 | 6:+93921572 | MsG0680034750.01.T01:CDS |
| GTACCGGACGAAATTTACGC+CGG | 0.738784 | 6:+93921528 | MsG0680034750.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AACTTGATGAAGAGATTGAA+AGG | + | Chr6:93921611-93921630 | MsG0680034750.01.T01:CDS | 30.0% | |
| ! | TGTGAGTAGACAAGTTTTTA+AGG | + | Chr6:93921651-93921670 | MsG0680034750.01.T01:CDS | 30.0% |
| AATTCTTCTGATCCTTCTAC+TGG | + | Chr6:93921709-93921728 | MsG0680034750.01.T01:CDS | 35.0% | |
| GAATTAGCATTACCAGTAGA+AGG | - | Chr6:93921724-93921743 | None:intergenic | 35.0% | |
| !! | GAAAGGTTTTGTGAAAGTGT+TGG | + | Chr6:93921628-93921647 | MsG0680034750.01.T01:CDS | 35.0% |
| !! | GATCAGTTGATGGAATATTC+CGG | + | Chr6:93921469-93921488 | MsG0680034750.01.T01:CDS | 35.0% |
| !!! | GTAGACAAGTTTTTAAGGTG+TGG | + | Chr6:93921656-93921675 | MsG0680034750.01.T01:CDS | 35.0% |
| ATCAGAAGGAGAAGATGATG+GGG | + | Chr6:93921551-93921570 | MsG0680034750.01.T01:CDS | 40.0% | |
| ATCATCTTCTCCTTCTGATC+CGG | - | Chr6:93921550-93921569 | None:intergenic | 40.0% | |
| CAAAATAACCGCGATCACAA+GGG | + | Chr6:93921420-93921439 | MsG0680034750.01.T01:CDS | 40.0% | |
| CAATTTCCACCCTAACTTCT+CGG | - | Chr6:93921581-93921600 | None:intergenic | 40.0% | |
| GATCAGAAGGAGAAGATGAT+GGG | + | Chr6:93921550-93921569 | MsG0680034750.01.T01:CDS | 40.0% | |
| !! | TTATTTTGCGGTGGAAGTTC+CGG | - | Chr6:93921408-93921427 | None:intergenic | 40.0% |
| !! | TTGTGATCGCGGTTATTTTG+CGG | - | Chr6:93921420-93921439 | None:intergenic | 40.0% |
| ACATTGGAGGCTGTTTATCG+CGG | - | Chr6:93921368-93921387 | None:intergenic | 45.0% | |
| GAAATTTACGCCGGATCAGA+AGG | + | Chr6:93921537-93921556 | MsG0680034750.01.T01:CDS | 45.0% | |
| GCAAAATAACCGCGATCACA+AGG | + | Chr6:93921419-93921438 | MsG0680034750.01.T01:CDS | 45.0% | |
| GGATCAGAAGGAGAAGATGA+TGG | + | Chr6:93921549-93921568 | MsG0680034750.01.T01:CDS | 45.0% | |
| TGCAATGTCGGATCAGTTGA+TGG | + | Chr6:93921459-93921478 | MsG0680034750.01.T01:CDS | 45.0% | |
| TTGATGGAATATTCCGGTGG+AGG | + | Chr6:93921475-93921494 | MsG0680034750.01.T01:CDS | 45.0% | |
| !! | CAGTTGATGGAATATTCCGG+TGG | + | Chr6:93921472-93921491 | MsG0680034750.01.T01:CDS | 45.0% |
| AGAAACCATGCAGCAAGCCT+TGG | + | Chr6:93921289-93921308 | MsG0680034750.01.T01:CDS | 50.0% | |
| ATGGAATATTCCGGTGGAGG+AGG | + | Chr6:93921478-93921497 | MsG0680034750.01.T01:CDS | 50.0% | |
| ATGGGGTTTGCCGAGAAGTT+AGG | + | Chr6:93921568-93921587 | MsG0680034750.01.T01:CDS | 50.0% | |
| CAACTGATCCGACATTGCAG+CGG | - | Chr6:93921458-93921477 | None:intergenic | 50.0% | |
| GATCCGGCGTAAATTTCGTC+CGG | - | Chr6:93921534-93921553 | None:intergenic | 50.0% | |
| GTACCGGACGAAATTTACGC+CGG | + | Chr6:93921528-93921547 | MsG0680034750.01.T01:CDS | 50.0% | |
| TGGGGTTTGCCGAGAAGTTA+GGG | + | Chr6:93921569-93921588 | MsG0680034750.01.T01:CDS | 50.0% | |
| !! | TGATCGCGGTTATTTTGCGG+TGG | - | Chr6:93921417-93921436 | None:intergenic | 50.0% |
| GGTTTGCCGAGAAGTTAGGG+TGG | + | Chr6:93921572-93921591 | MsG0680034750.01.T01:CDS | 55.0% | |
| TATTCCGGTGGAGGAGGTAG+TGG | + | Chr6:93921484-93921503 | MsG0680034750.01.T01:CDS | 55.0% | |
| TGGAGGCTGTTTATCGCGGA+TGG | - | Chr6:93921364-93921383 | None:intergenic | 55.0% | |
| ! | ATGGGAGGAGGAAGAGGTAC+CGG | + | Chr6:93921512-93921531 | MsG0680034750.01.T01:CDS | 55.0% |
| !! | AGCTTCCAAGGCTTGCTGCA+TGG | - | Chr6:93921297-93921316 | None:intergenic | 55.0% |
| !! | GAGGAGGTAGTGGAGGAGAT+GGG | + | Chr6:93921494-93921513 | MsG0680034750.01.T01:CDS | 55.0% |
| AGCCTCCAATGTGCAGCCTG+CGG | + | Chr6:93921376-93921395 | MsG0680034750.01.T01:CDS | 60.0% | |
| CTTGGAAGCTACGCCACCGA+CGG | + | Chr6:93921307-93921326 | MsG0680034750.01.T01:CDS | 60.0% | |
| GAGGAGATGGGAGGAGGAAG+AGG | + | Chr6:93921506-93921525 | MsG0680034750.01.T01:CDS | 60.0% | |
| GGATGGCGATGAGTCGTCGA+TGG | - | Chr6:93921347-93921366 | None:intergenic | 60.0% | |
| GGCACTCTCCCTTGTGATCG+CGG | - | Chr6:93921431-93921450 | None:intergenic | 60.0% | |
| GGTGAATTCACCGCAGCCGT+CGG | - | Chr6:93921326-93921345 | None:intergenic | 60.0% | |
| TCCTCCACTACCTCCTCCAC+CGG | - | Chr6:93921491-93921510 | None:intergenic | 60.0% | |
| ! | GTAGTGGAGGAGATGGGAGG+AGG | + | Chr6:93921500-93921519 | MsG0680034750.01.T01:CDS | 60.0% |
| !! | GAGGTAGTGGAGGAGATGGG+AGG | + | Chr6:93921497-93921516 | MsG0680034750.01.T01:CDS | 60.0% |
| !! | GATCACAAGGGAGAGTGCCG+CGG | + | Chr6:93921432-93921451 | MsG0680034750.01.T01:CDS | 60.0% |
| !! | GGAGGAGGTAGTGGAGGAGA+TGG | + | Chr6:93921493-93921512 | MsG0680034750.01.T01:CDS | 60.0% |
| AGCCGCAGGCTGCACATTGG+AGG | - | Chr6:93921381-93921400 | None:intergenic | 65.0% | |
| ATCCGACATTGCAGCGGCCG+CGG | - | Chr6:93921452-93921471 | None:intergenic | 65.0% | |
| CGTCGGTGGCGTAGCTTCCA+AGG | - | Chr6:93921309-93921328 | None:intergenic | 65.0% | |
| GAAGTTCCGGTGACAGCCGC+AGG | - | Chr6:93921395-93921414 | None:intergenic | 65.0% | |
| GAATTCACCGCAGCCGTCGG+TGG | - | Chr6:93921323-93921342 | None:intergenic | 65.0% | |
| GACAGCCGCAGGCTGCACAT+TGG | - | Chr6:93921384-93921403 | None:intergenic | 65.0% | |
| ! | TCCGGTGGAGGAGGTAGTGG+AGG | + | Chr6:93921487-93921506 | MsG0680034750.01.T01:CDS | 65.0% |
| AGCTACGCCACCGACGGCTG+CGG | + | Chr6:93921313-93921332 | MsG0680034750.01.T01:CDS | 70.0% | |
| GTGCAGCCTGCGGCTGTCAC+CGG | + | Chr6:93921386-93921405 | MsG0680034750.01.T01:CDS | 70.0% | |
| TGCCGCGGCCGCTGCAATGT+CGG | + | Chr6:93921447-93921466 | MsG0680034750.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 93921235 | 93921759 | 93921235 | ID=MsG0680034750.01;Name=MsG0680034750.01 |
| Chr6 | mRNA | 93921235 | 93921759 | 93921235 | ID=MsG0680034750.01.T01;Parent=MsG0680034750.01;Name=MsG0680034750.01.T01;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|174 |
| Chr6 | exon | 93921235 | 93921759 | 93921235 | ID=MsG0680034750.01.T01:exon:5887;Parent=MsG0680034750.01.T01 |
| Chr6 | CDS | 93921235 | 93921759 | 93921235 | ID=MsG0680034750.01.T01:cds;Parent=MsG0680034750.01.T01 |
| Gene Sequence |
| Protein sequence |
